BLASTX nr result

ID: Glycyrrhiza28_contig00006308 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00006308
         (264 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU50589.1 hypothetical protein TSUD_283200 [Trifolium subterran...    58   3e-08
XP_007151135.1 hypothetical protein PHAVU_004G020800g [Phaseolus...    58   8e-08
KOM56818.1 hypothetical protein LR48_Vigan10g271000 [Vigna angul...    58   8e-08
XP_007151134.1 hypothetical protein PHAVU_004G020800g [Phaseolus...    58   8e-08
KYP39810.1 hypothetical protein KK1_038875 [Cajanus cajan]             57   1e-07
XP_014512317.1 PREDICTED: chloroplastic group IIA intron splicin...    57   1e-07
XP_004489339.1 PREDICTED: chloroplastic group IIA intron splicin...    57   2e-07
XP_003618343.2 group IIA intron splicing facilitator CRS1 [Medic...    57   2e-07
KHN16352.1 Chloroplastic group IIA intron splicing facilitator C...    56   4e-07
XP_003554853.1 PREDICTED: chloroplastic group IIA intron splicin...    56   4e-07
XP_010550103.1 PREDICTED: CRM-domain containing factor CFM2, chl...    52   7e-06

>GAU50589.1 hypothetical protein TSUD_283200 [Trifolium subterraneum]
          Length = 229

 Score = 58.2 bits (139), Expect = 3e-08
 Identities = 32/53 (60%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
 Frame = +3

Query: 99  PVHFPTKSNTKTLVPTKFVIRCSDSE-TRTVPDSAIQRIADKLRSLGITDHQS 254
           P HFP    +KTL P+KF+IR S S  +RT+  SAIQRIADK++SLGIT  QS
Sbjct: 24  PFHFP---KSKTLTPSKFIIRSSSSNNSRTLSQSAIQRIADKIQSLGITTDQS 73


>XP_007151135.1 hypothetical protein PHAVU_004G020800g [Phaseolus vulgaris]
           XP_007151136.1 hypothetical protein PHAVU_004G020800g
           [Phaseolus vulgaris] ESW23129.1 hypothetical protein
           PHAVU_004G020800g [Phaseolus vulgaris] ESW23130.1
           hypothetical protein PHAVU_004G020800g [Phaseolus
           vulgaris]
          Length = 960

 Score = 57.8 bits (138), Expect = 8e-08
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = +3

Query: 147 KFVIRCSDSETRTVPDSAIQRIADKLRSLGITDHQS 254
           KF+IRCSD+E  T+PDSAIQRIA+KLRSLGI D  S
Sbjct: 36  KFLIRCSDTEAETLPDSAIQRIAEKLRSLGIDDRSS 71


>KOM56818.1 hypothetical protein LR48_Vigan10g271000 [Vigna angularis]
          Length = 1002

 Score = 57.8 bits (138), Expect = 8e-08
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = +3

Query: 147 KFVIRCSDSETRTVPDSAIQRIADKLRSLGITDHQS 254
           KF+IRCSD+E  T+P+SAIQRIADKLRSLGI D  S
Sbjct: 36  KFLIRCSDTEAETLPESAIQRIADKLRSLGIDDQSS 71


>XP_007151134.1 hypothetical protein PHAVU_004G020800g [Phaseolus vulgaris]
           XP_007151137.1 hypothetical protein PHAVU_004G020800g
           [Phaseolus vulgaris] ESW23128.1 hypothetical protein
           PHAVU_004G020800g [Phaseolus vulgaris] ESW23131.1
           hypothetical protein PHAVU_004G020800g [Phaseolus
           vulgaris]
          Length = 1016

 Score = 57.8 bits (138), Expect = 8e-08
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = +3

Query: 147 KFVIRCSDSETRTVPDSAIQRIADKLRSLGITDHQS 254
           KF+IRCSD+E  T+PDSAIQRIA+KLRSLGI D  S
Sbjct: 36  KFLIRCSDTEAETLPDSAIQRIAEKLRSLGIDDRSS 71


>KYP39810.1 hypothetical protein KK1_038875 [Cajanus cajan]
          Length = 976

 Score = 57.4 bits (137), Expect = 1e-07
 Identities = 34/58 (58%), Positives = 44/58 (75%), Gaps = 7/58 (12%)
 Frame = +3

Query: 111 PTKSNTKTLVP-------TKFVIRCSDSETRTVPDSAIQRIADKLRSLGITDHQSPAS 263
           P  S++ +L P       +KF+IRCSD+ET  +PDSAIQRIADKLR+LGITD +SPA+
Sbjct: 18  PPSSSSFSLFPFQIPKTKSKFLIRCSDTET--LPDSAIQRIADKLRTLGITD-ESPAT 72


>XP_014512317.1 PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Vigna radiata var. radiata]
          Length = 1012

 Score = 57.4 bits (137), Expect = 1e-07
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = +3

Query: 147 KFVIRCSDSETRTVPDSAIQRIADKLRSLGITDHQS 254
           KF+IRCS++E  T+PDSAIQRIADKLRSLGI D  S
Sbjct: 33  KFLIRCSETEAETLPDSAIQRIADKLRSLGIHDQSS 68


>XP_004489339.1 PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic isoform X1 [Cicer arietinum]
          Length = 1019

 Score = 57.0 bits (136), Expect = 2e-07
 Identities = 32/53 (60%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
 Frame = +3

Query: 99  PVHFPTKSNTKTLV-PTKFVIRCSDSETRTVPDSAIQRIADKLRSLGITDHQS 254
           P  F  KS T TL   +KF+ R S S++RT+P+SAIQRIADKL+SLGIT  QS
Sbjct: 17  PFLFFPKSKTLTLTHSSKFIFRISASKSRTLPESAIQRIADKLQSLGITTEQS 69


>XP_003618343.2 group IIA intron splicing facilitator CRS1 [Medicago truncatula]
           AES74561.2 group IIA intron splicing facilitator CRS1
           [Medicago truncatula]
          Length = 1045

 Score = 57.0 bits (136), Expect = 2e-07
 Identities = 36/79 (45%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
 Frame = +3

Query: 39  MLLPAXXXXXXXXXXXXXXXPVHFPTKSNTKTLVPTKFVIRCSDSETRTVPDSAIQRIAD 218
           MLLP                P HFP         P+KF IR S S + T+PDSAIQRIAD
Sbjct: 1   MLLPTTNFNTFFTPSSPFFFPFHFPK-------TPSKFTIRTSSSNSHTLPDSAIQRIAD 53

Query: 219 KLRSLGI----TDHQSPAS 263
           KL SLGI    T H S +S
Sbjct: 54  KLHSLGIITTTTGHSSSSS 72


>KHN16352.1 Chloroplastic group IIA intron splicing facilitator CRS1,
           chloroplastic [Glycine soja]
          Length = 1024

 Score = 55.8 bits (133), Expect = 4e-07
 Identities = 29/39 (74%), Positives = 33/39 (84%)
 Frame = +3

Query: 147 KFVIRCSDSETRTVPDSAIQRIADKLRSLGITDHQSPAS 263
           KF+IRCSD+ET  +PDSAIQRIADKLRSLGI D  S A+
Sbjct: 41  KFLIRCSDTET--LPDSAIQRIADKLRSLGIADQPSTAT 77


>XP_003554853.1 PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Glycine max] KRG93409.1
           hypothetical protein GLYMA_19G014000 [Glycine max]
          Length = 1027

 Score = 55.8 bits (133), Expect = 4e-07
 Identities = 29/39 (74%), Positives = 33/39 (84%)
 Frame = +3

Query: 147 KFVIRCSDSETRTVPDSAIQRIADKLRSLGITDHQSPAS 263
           KF+IRCSD+ET  +PDSAIQRIADKLRSLGI D  S A+
Sbjct: 44  KFLIRCSDTET--LPDSAIQRIADKLRSLGIADQPSTAT 80


>XP_010550103.1 PREDICTED: CRM-domain containing factor CFM2, chloroplastic
           [Tarenaya hassleriana]
          Length = 1037

 Score = 52.4 bits (124), Expect = 7e-06
 Identities = 26/36 (72%), Positives = 30/36 (83%)
 Frame = +3

Query: 138 VPTKFVIRCSDSETRTVPDSAIQRIADKLRSLGITD 245
           V TKFVIR S SE +T+P SAIQRIA+KLRSLG T+
Sbjct: 37  VRTKFVIRSSTSEAKTLPQSAIQRIAEKLRSLGFTE 72