BLASTX nr result

ID: Glycyrrhiza28_contig00005836 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00005836
         (329 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_019227345.1 PREDICTED: eukaryotic translation initiation fact...    45   2e-06
XP_019227346.1 PREDICTED: eukaryotic translation initiation fact...    45   2e-06

>XP_019227345.1 PREDICTED: eukaryotic translation initiation factor isoform X1
           [Nicotiana attenuata] OIT31446.1 eukaryotic translation
           initiation factor isoform 4g-1 [Nicotiana attenuata]
          Length = 776

 Score = 45.4 bits (106), Expect(2) = 2e-06
 Identities = 22/32 (68%), Positives = 24/32 (75%)
 Frame = +1

Query: 223 LSFLSPGDSQFEGHERV*YTRDQLL*LRETGD 318
           L +   GDS+FEGHERV YTRDQLL LRE  D
Sbjct: 45  LPYFKTGDSRFEGHERVRYTRDQLLQLREVVD 76



 Score = 33.5 bits (75), Expect(2) = 2e-06
 Identities = 23/45 (51%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
 Frame = +2

Query: 116 MQVDGTV--LRPXXXXXXXXXXXXHSS--SDLPLLRPHGTSPFSL 238
           MQ D TV  LRP            HSS  SDLPLLRPHG    SL
Sbjct: 1   MQADQTVISLRPGGGGNRSRVLVGHSSTNSDLPLLRPHGGGSSSL 45


>XP_019227346.1 PREDICTED: eukaryotic translation initiation factor isoform X2
           [Nicotiana attenuata]
          Length = 774

 Score = 45.4 bits (106), Expect(2) = 2e-06
 Identities = 22/32 (68%), Positives = 24/32 (75%)
 Frame = +1

Query: 223 LSFLSPGDSQFEGHERV*YTRDQLL*LRETGD 318
           L +   GDS+FEGHERV YTRDQLL LRE  D
Sbjct: 45  LPYFKTGDSRFEGHERVRYTRDQLLQLREVVD 76



 Score = 33.5 bits (75), Expect(2) = 2e-06
 Identities = 23/45 (51%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
 Frame = +2

Query: 116 MQVDGTV--LRPXXXXXXXXXXXXHSS--SDLPLLRPHGTSPFSL 238
           MQ D TV  LRP            HSS  SDLPLLRPHG    SL
Sbjct: 1   MQADQTVISLRPGGGGNRSRVLVGHSSTNSDLPLLRPHGGGSSSL 45


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