BLASTX nr result

ID: Glycyrrhiza24_contig00025300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025300
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539241.1| PREDICTED: LOW QUALITY PROTEIN: integrator c...   165   4e-39
ref|XP_002520390.1| conserved hypothetical protein [Ricinus comm...   139   2e-31
ref|XP_002265081.2| PREDICTED: integrator complex subunit 9 homo...   137   7e-31
ref|XP_004167262.1| PREDICTED: integrator complex subunit 9 homo...   137   9e-31
ref|XP_004146463.1| PREDICTED: integrator complex subunit 9 homo...   137   9e-31

>ref|XP_003539241.1| PREDICTED: LOW QUALITY PROTEIN: integrator complex subunit 9-like
           [Glycine max]
          Length = 794

 Score =  165 bits (417), Expect = 4e-39
 Identities = 78/93 (83%), Positives = 85/93 (91%)
 Frame = -2

Query: 280 RQEELEILPSVLREIISGKDGVELGGWMPLYSAADVKDCMLKINTLNYAEEACYNGTLVI 101
           R EELE+LPS LRE+I GKDGVELGGWMPLYSAADVKD MLKI+T+NYAEE C+NGTLVI
Sbjct: 261 RHEELEVLPSELRELILGKDGVELGGWMPLYSAADVKDFMLKIHTVNYAEEVCFNGTLVI 320

Query: 100 KAFSSGVEIGSCNWLLNGPKGDIAYLSNSRFIS 2
           KAFSSG+EIGSCNW+LN PKGDIAYLS S FIS
Sbjct: 321 KAFSSGIEIGSCNWILNSPKGDIAYLSGSSFIS 353


>ref|XP_002520390.1| conserved hypothetical protein [Ricinus communis]
           gi|223540437|gb|EEF42006.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 705

 Score =  139 bits (350), Expect = 2e-31
 Identities = 65/93 (69%), Positives = 76/93 (81%)
 Frame = -2

Query: 280 RQEELEILPSVLREIISGKDGVELGGWMPLYSAADVKDCMLKINTLNYAEEACYNGTLVI 101
           R EELE+LPS LRE+  GKDG ELG W PLYS+ DVKDCM KI  L YAE ACYNG LVI
Sbjct: 173 RWEELELLPSELREVTLGKDGSELGAWFPLYSSVDVKDCMQKIEMLKYAEAACYNGELVI 232

Query: 100 KAFSSGVEIGSCNWLLNGPKGDIAYLSNSRFIS 2
           KAFSSG+EIGSCNWL+ GPK ++A++S+S F+S
Sbjct: 233 KAFSSGIEIGSCNWLIEGPKENMAWVSSSIFLS 265


>ref|XP_002265081.2| PREDICTED: integrator complex subunit 9 homolog [Vitis vinifera]
           gi|296081277|emb|CBI17721.3| unnamed protein product
           [Vitis vinifera]
          Length = 774

 Score =  137 bits (346), Expect = 7e-31
 Identities = 64/91 (70%), Positives = 77/91 (84%)
 Frame = -2

Query: 274 EELEILPSVLREIISGKDGVELGGWMPLYSAADVKDCMLKINTLNYAEEACYNGTLVIKA 95
           E+LE LPS+ REI+ G+DGVELGGWMPLYSA DVK CM K++TL YA+E CYNGTL+IKA
Sbjct: 247 EKLESLPSLFREIVLGEDGVELGGWMPLYSADDVKGCMQKVHTLKYAQEVCYNGTLIIKA 306

Query: 94  FSSGVEIGSCNWLLNGPKGDIAYLSNSRFIS 2
            SSG+EIG+CNW +NGPK +IA LS+S F S
Sbjct: 307 VSSGLEIGTCNWTINGPKRNIACLSSSIFNS 337


>ref|XP_004167262.1| PREDICTED: integrator complex subunit 9 homolog, partial [Cucumis
           sativus]
          Length = 680

 Score =  137 bits (345), Expect = 9e-31
 Identities = 63/93 (67%), Positives = 74/93 (79%)
 Frame = -2

Query: 280 RQEELEILPSVLREIISGKDGVELGGWMPLYSAADVKDCMLKINTLNYAEEACYNGTLVI 101
           RQE+L +L   LRE+  G+D  + GGWMP+YSAADVKDCM K+ TL Y EE CYNGTLVI
Sbjct: 158 RQEDLSLLHHKLREVAFGQDRADFGGWMPMYSAADVKDCMQKVETLRYGEETCYNGTLVI 217

Query: 100 KAFSSGVEIGSCNWLLNGPKGDIAYLSNSRFIS 2
           KAFSSG+EIGSCNW +N PK DIAY+S+S F S
Sbjct: 218 KAFSSGLEIGSCNWTINCPKRDIAYISSSIFFS 250


>ref|XP_004146463.1| PREDICTED: integrator complex subunit 9 homolog [Cucumis sativus]
          Length = 693

 Score =  137 bits (345), Expect = 9e-31
 Identities = 63/93 (67%), Positives = 74/93 (79%)
 Frame = -2

Query: 280 RQEELEILPSVLREIISGKDGVELGGWMPLYSAADVKDCMLKINTLNYAEEACYNGTLVI 101
           RQE+L +L   LRE+  G+D  + GGWMP+YSAADVKDCM K+ TL Y EE CYNGTLVI
Sbjct: 171 RQEDLSLLHHKLREVAFGQDRADFGGWMPMYSAADVKDCMQKVETLRYGEETCYNGTLVI 230

Query: 100 KAFSSGVEIGSCNWLLNGPKGDIAYLSNSRFIS 2
           KAFSSG+EIGSCNW +N PK DIAY+S+S F S
Sbjct: 231 KAFSSGLEIGSCNWTINCPKRDIAYISSSIFFS 263


Top