BLASTX nr result

ID: Glycyrrhiza24_contig00018403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018403
         (868 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624945.1| Peroxisomal biogenesis factor [Medicago trun...   292   6e-77
gb|ABN08542.1| AAA ATPase, central region; L-lactate dehydrogena...   292   6e-77
gb|ADV56698.1| AAA-family ATPase [Phaseolus vulgaris]                 269   7e-70
ref|XP_002321026.1| predicted protein [Populus trichocarpa] gi|2...   206   7e-51
ref|XP_002520662.1| peroxisome assembly factor-2, putative [Rici...   184   3e-44

>ref|XP_003624945.1| Peroxisomal biogenesis factor [Medicago truncatula]
           gi|355499960|gb|AES81163.1| Peroxisomal biogenesis
           factor [Medicago truncatula]
          Length = 952

 Score =  292 bits (748), Expect = 6e-77
 Identities = 165/248 (66%), Positives = 188/248 (75%), Gaps = 1/248 (0%)
 Frame = -3

Query: 743 MVERRRKPLVLCSTKHVLNSLLGSSTSPTNKDEPSPPNFQLPVGILRFSNQTQSPSLDHX 564
           MVERRRKPL+LCSTK  +NS+L SS S  N++E   PNF LPVGILRFSN+   PS DH 
Sbjct: 1   MVERRRKPLILCSTKTAINSVLKSSNSSINENEF--PNFNLPVGILRFSNKF--PSFDHS 56

Query: 563 XXXXXXXXXXXXXXXXXXSPVLVKNVDMNTQRIAVAIALDPPGS-TDLEXXXXXXXXXSR 387
                             SPVLVKN +MNTQR+AVAIALDPP S T            SR
Sbjct: 57  ALIALSTSLLKTLSITSGSPVLVKNAEMNTQRVAVAIALDPPSSDTTTLDIDHSPPASSR 116

Query: 386 IMLVFPSCDFPHSGPLLNDNKVAYLSPLLAFNLSLHIACLKSILHHGQDSLASYFKPQGQ 207
           IMLVFPSCDFP +GPLLN  ++AYLSPLLAFNL+LHI+CLKSI+H+ QD+LASYFKPQ Q
Sbjct: 117 IMLVFPSCDFPLNGPLLN-GEIAYLSPLLAFNLNLHISCLKSIIHNSQDALASYFKPQCQ 175

Query: 206 VGDDEDAAKSIEDSVIKIELAPLAEPPRFASLLRVAFVKIPQCGILESIRQSSPIESQER 27
           VGD EDAAKS EDSVI IEL PLA+PPRFASLLRVAFVKIP+CGIL+SI+  S +ES+ER
Sbjct: 176 VGD-EDAAKSFEDSVINIELKPLAQPPRFASLLRVAFVKIPECGILDSIKPISDVESKER 234

Query: 26  QEMIDLAL 3
           Q+MIDLAL
Sbjct: 235 QDMIDLAL 242


>gb|ABN08542.1| AAA ATPase, central region; L-lactate dehydrogenase [Medicago
           truncatula]
          Length = 924

 Score =  292 bits (748), Expect = 6e-77
 Identities = 165/248 (66%), Positives = 188/248 (75%), Gaps = 1/248 (0%)
 Frame = -3

Query: 743 MVERRRKPLVLCSTKHVLNSLLGSSTSPTNKDEPSPPNFQLPVGILRFSNQTQSPSLDHX 564
           MVERRRKPL+LCSTK  +NS+L SS S  N++E   PNF LPVGILRFSN+   PS DH 
Sbjct: 1   MVERRRKPLILCSTKTAINSVLKSSNSSINENEF--PNFNLPVGILRFSNKF--PSFDHS 56

Query: 563 XXXXXXXXXXXXXXXXXXSPVLVKNVDMNTQRIAVAIALDPPGS-TDLEXXXXXXXXXSR 387
                             SPVLVKN +MNTQR+AVAIALDPP S T            SR
Sbjct: 57  ALIALSTSLLKTLSITSGSPVLVKNAEMNTQRVAVAIALDPPSSDTTTLDIDHSPPASSR 116

Query: 386 IMLVFPSCDFPHSGPLLNDNKVAYLSPLLAFNLSLHIACLKSILHHGQDSLASYFKPQGQ 207
           IMLVFPSCDFP +GPLLN  ++AYLSPLLAFNL+LHI+CLKSI+H+ QD+LASYFKPQ Q
Sbjct: 117 IMLVFPSCDFPLNGPLLN-GEIAYLSPLLAFNLNLHISCLKSIIHNSQDALASYFKPQCQ 175

Query: 206 VGDDEDAAKSIEDSVIKIELAPLAEPPRFASLLRVAFVKIPQCGILESIRQSSPIESQER 27
           VGD EDAAKS EDSVI IEL PLA+PPRFASLLRVAFVKIP+CGIL+SI+  S +ES+ER
Sbjct: 176 VGD-EDAAKSFEDSVINIELKPLAQPPRFASLLRVAFVKIPECGILDSIKPISDVESKER 234

Query: 26  QEMIDLAL 3
           Q+MIDLAL
Sbjct: 235 QDMIDLAL 242


>gb|ADV56698.1| AAA-family ATPase [Phaseolus vulgaris]
          Length = 949

 Score =  269 bits (687), Expect = 7e-70
 Identities = 152/252 (60%), Positives = 183/252 (72%), Gaps = 5/252 (1%)
 Frame = -3

Query: 743 MVERRRKPLVLCSTKHVLNSLLGSSTSPTNK---DEPSPPNFQLPVGILRFSNQTQSPSL 573
           MVERRRKPL+LCSTKHV+NS     T+PT      + SP  F+ PVGILRFSN T +PS+
Sbjct: 1   MVERRRKPLILCSTKHVINS-----TAPTTNLFHRDSSPSFFRFPVGILRFSNLT-NPSV 54

Query: 572 DHXXXXXXXXXXXXXXXXXXXSPVLVKNVDMNTQRIAVAIALDPPGST--DLEXXXXXXX 399
           DH                   S VLVKNVD NTQ+IAVA+ALDPPG+T            
Sbjct: 55  DHSSLLALSTPLLKTLSITSGSQVLVKNVDTNTQKIAVAVALDPPGTTVNTESPSSSSSS 114

Query: 398 XXSRIMLVFPSCDFPHSGPLLNDNKVAYLSPLLAFNLSLHIACLKSILHHGQDSLASYFK 219
             SRIML+FPSC FP +G +L+D ++AY+SPLLAFNL+LH+ CLKS+LHHGQ+ LASYF 
Sbjct: 115 HSSRIMLLFPSCHFPFNGSVLDD-QIAYVSPLLAFNLNLHVTCLKSVLHHGQEVLASYFG 173

Query: 218 PQGQVGDDEDAAKSIEDSVIKIELAPLAEPPRFASLLRVAFVKIPQCGILESIRQSSPIE 39
           P+ + GD++DA KS  DSVI +EL PLA PP+FASLLRV+FVKIPQCGILESIR SSP E
Sbjct: 174 PREKRGDEDDA-KSTVDSVIDVELEPLALPPKFASLLRVSFVKIPQCGILESIRASSPFE 232

Query: 38  SQERQEMIDLAL 3
           S+ERQ+MIDL+L
Sbjct: 233 SEERQDMIDLSL 244


>ref|XP_002321026.1| predicted protein [Populus trichocarpa] gi|222861799|gb|EEE99341.1|
           predicted protein [Populus trichocarpa]
          Length = 930

 Score =  206 bits (523), Expect = 7e-51
 Identities = 123/250 (49%), Positives = 157/250 (62%), Gaps = 2/250 (0%)
 Frame = -3

Query: 746 KMVERRRKPLVLCSTKHVLNSLLGSSTSPTNKDEPSPPNFQLPVGILRFSNQTQSPSLDH 567
           +MVERRRKPL+L STK ++ S+L SS  P N   PSP + QL  GILR S    + S D 
Sbjct: 2   EMVERRRKPLILSSTKILIGSVLRSS--PLNNISPSP-SLQLLAGILRLSEDKLASSFDD 58

Query: 566 XXXXXXXXXXXXXXXXXXXSPVLVKNVDMNTQRIAVAIALDPPGSTDLEXXXXXXXXXS- 390
                              S VL+KNV+ N +RIA  +ALDPP + + E         S 
Sbjct: 59  SALLAISTSILKRLSVTSSSLVLIKNVEANIERIAQVVALDPPRNNENELKSNANLRISC 118

Query: 389 RIMLVFPSCDFPHSGP-LLNDNKVAYLSPLLAFNLSLHIACLKSILHHGQDSLASYFKPQ 213
             M +FP+C FP   P LL D ++AYLSPLLAFNL LH++CLKS++  G +SLAS F+  
Sbjct: 119 TTMRLFPTCIFPPDDPSLLLDREIAYLSPLLAFNLGLHVSCLKSLVRRGDESLASLFEVD 178

Query: 212 GQVGDDEDAAKSIEDSVIKIELAPLAEPPRFASLLRVAFVKIPQCGILESIRQSSPIESQ 33
           G+   DED + + EDS I + L PLA  PR+AS LRV+FVKIP+CG LES++  S IE++
Sbjct: 179 GETCCDEDVSANCEDSAISVGLEPLARLPRYASHLRVSFVKIPECGTLESLKGFSSIEAE 238

Query: 32  ERQEMIDLAL 3
           ERQEMIDLAL
Sbjct: 239 ERQEMIDLAL 248


>ref|XP_002520662.1| peroxisome assembly factor-2, putative [Ricinus communis]
           gi|223540047|gb|EEF41624.1| peroxisome assembly
           factor-2, putative [Ricinus communis]
          Length = 920

 Score =  184 bits (466), Expect = 3e-44
 Identities = 112/255 (43%), Positives = 153/255 (60%), Gaps = 8/255 (3%)
 Frame = -3

Query: 743 MVERRRKPLVLCSTKHVLNSLLGSSTSPTNKDEPSPPNFQLPVGILRFSNQ--------T 588
           MVERRRKPLVL STK +++S+L SS    ++D+  PP    P GILR S          +
Sbjct: 1   MVERRRKPLVLSSTKFLVDSVLSSSR--ISRDD-LPPRLLFPAGILRLSKDRIGTLDSTS 57

Query: 587 QSPSLDHXXXXXXXXXXXXXXXXXXXSPVLVKNVDMNTQRIAVAIALDPPGSTDLEXXXX 408
           +  SLD                    SPVLVKN++ N +RIA  + LDPP +        
Sbjct: 58  KLTSLDDSALVGLPTAALKKLAVTCGSPVLVKNIETNKRRIAQVVILDPPRNHG-HTASC 116

Query: 407 XXXXXSRIMLVFPSCDFPHSGPLLNDNKVAYLSPLLAFNLSLHIACLKSILHHGQDSLAS 228
                S  MLVFPS   P   PL+ D+++A+LSPLLAFNL LHI+CL S++H G + L S
Sbjct: 117 VKQPNSHTMLVFPSYSLPSDEPLILDDEIAFLSPLLAFNLDLHISCLNSLVHQGNERLVS 176

Query: 227 YFKPQGQVGDDEDAAKSIEDSVIKIELAPLAEPPRFASLLRVAFVKIPQCGILESIRQSS 48
            F  +    +D+   +    S+I +EL PLA+ PR+AS LRV+FVKIP+CG+L+S++ SS
Sbjct: 177 LFNSKT---NDDTCGEVSHHSLINLELEPLAQLPRYASHLRVSFVKIPECGMLDSLKGSS 233

Query: 47  PIESQERQEMIDLAL 3
            +E+++RQ MIDLAL
Sbjct: 234 SVEAEDRQGMIDLAL 248


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