BLASTX nr result

ID: Glycyrrhiza24_contig00018225 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018225
         (1080 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534471.1| PREDICTED: ranBP2-type zinc finger protein A...   356   6e-96
ref|XP_002273973.1| PREDICTED: ranBP2-type zinc finger protein A...   294   3e-77
ref|XP_003551716.1| PREDICTED: uncharacterized protein LOC100775...   271   2e-70
ref|NP_001131360.1| uncharacterized protein LOC100192683 [Zea ma...   253   6e-65
gb|ACR37925.1| unknown [Zea mays] gi|414886722|tpg|DAA62736.1| T...   253   8e-65

>ref|XP_003534471.1| PREDICTED: ranBP2-type zinc finger protein At1g67325-like [Glycine
           max]
          Length = 247

 Score =  356 bits (913), Expect = 6e-96
 Identities = 169/244 (69%), Positives = 188/244 (77%), Gaps = 4/244 (1%)
 Frame = -2

Query: 983 KDGNRGSFGSKRSRNDVSRKDGDWTCTNCGNLNFSFRTVCNRGHCGAPRPS--VTPPAQV 810
           K  NRGS GSKR RND SRKDGDWTC NCGNLNFSFRTVCN+GHCGAPRPS  +TPPA +
Sbjct: 5   KVNNRGSPGSKRFRNDASRKDGDWTCPNCGNLNFSFRTVCNQGHCGAPRPSLTITPPAPI 64

Query: 809 MSPYRNGPPQFXXXXXXXXXXXXGMSSRFGSPIPHSGLQYEYGLXXXXXXXXXXXXXXXP 630
           +SPYRN  P F            G+ S+FGSPIPH GLQY+YGL               P
Sbjct: 65  ISPYRNSHP-FYHGGFGIPPPSYGIPSQFGSPIPHPGLQYDYGLYARARAPYSPLPMFPP 123

Query: 629 GNFGGMPYSPRPNINPYGYGFQGPPP-WDTGLIADNFASRKRRGGPDGLSEGDWICPKCD 453
            +FGG+ Y PRP I+ YGYGFQ PPP W  GL+ADNFASRKRRGGPDGLSEGDWICP+CD
Sbjct: 124 ASFGGINYGPRPRIDGYGYGFQSPPPPWAEGLVADNFASRKRRGGPDGLSEGDWICPRCD 183

Query: 452 NVNFAFRTTCNMKHCGAARAGSSQPNTS-IPEGSWTCKKCGNLNYPFRNVCNRKDCGSEK 276
           NVNFAFRTTCN+KHCGA +  S++PNT+ IPEGSWTC+KCGNLNYPFRNVCNRKDC +EK
Sbjct: 184 NVNFAFRTTCNIKHCGAVKPSSNKPNTAVIPEGSWTCEKCGNLNYPFRNVCNRKDCRNEK 243

Query: 275 TASA 264
           T SA
Sbjct: 244 TVSA 247


>ref|XP_002273973.1| PREDICTED: ranBP2-type zinc finger protein At1g67325-like [Vitis
           vinifera]
          Length = 242

 Score =  294 bits (752), Expect = 3e-77
 Identities = 142/238 (59%), Positives = 159/238 (66%), Gaps = 2/238 (0%)
 Frame = -2

Query: 974 NRGSFGSKRSRNDVSRKDGDWTCTNCGNLNFSFRTVCNRGHCGAPRPSVTPPAQVMSPYR 795
           N GSFGSKRSRND SR +GDWTC  CGN+NF FRTVCNRG CGAPRP  TP A + SPY 
Sbjct: 8   NNGSFGSKRSRNDASRNEGDWTCPKCGNMNFGFRTVCNRGKCGAPRPPATPSAPITSPYN 67

Query: 794 NGPPQFXXXXXXXXXXXXGMSSRFGSPIPHSGLQYEYGLXXXXXXXXXXXXXXXPGNFGG 615
           + PP +            G  SR+G PIP  G+ Y+Y                     GG
Sbjct: 68  HPPPFYFGGVGAPPPMPLGGPSRYGPPIPVPGMHYDYSPGNVHGPYGLLTTFPP----GG 123

Query: 614 MPYSPRPNINPYGYGFQGPPPWDTGLIADNFASRKRRGGPDGLSEGDWICPKCDNVNFAF 435
           M Y   P I+ YG+GFQG PPW  G + D  ASRKRRGGPDGLSEGDW+CPKCDNVNFAF
Sbjct: 124 MGYGSGPAISGYGFGFQG-PPWAGGGMPDGTASRKRRGGPDGLSEGDWVCPKCDNVNFAF 182

Query: 434 RTTCNMKHCGAAR--AGSSQPNTSIPEGSWTCKKCGNLNYPFRNVCNRKDCGSEKTAS 267
           RTTCNMK CGAAR  +G S+ ++  PEGSWTC KC NLNYPFR VCNRK CG+EK AS
Sbjct: 183 RTTCNMKKCGAARPSSGPSRSDSGAPEGSWTCSKCENLNYPFRTVCNRKGCGNEKPAS 240


>ref|XP_003551716.1| PREDICTED: uncharacterized protein LOC100775590 [Glycine max]
          Length = 541

 Score =  271 bits (694), Expect = 2e-70
 Identities = 129/199 (64%), Positives = 143/199 (71%), Gaps = 3/199 (1%)
 Frame = -2

Query: 983 KDGNRGSFGSKRSRNDVSRKDGDWTCTNCGNLNFSFRTVCNRGHCGAPRPSVTPPAQVMS 804
           K  NRGS GSKR RND SRKDGDWTC NCGNLNFSFRTVCN+G CGAPRP +TPPA ++S
Sbjct: 5   KVNNRGSPGSKRFRNDASRKDGDWTCPNCGNLNFSFRTVCNQGRCGAPRPPLTPPAPIIS 64

Query: 803 PYRNGPPQFXXXXXXXXXXXXGMSSRFGSPIPHSGLQYEYGLXXXXXXXXXXXXXXXPGN 624
           PYRN  P F            GM S+FGSPIPH G+QY+YGL               P +
Sbjct: 65  PYRNSHP-FYYGGVGIPPPSYGMPSQFGSPIPHPGIQYDYGLYARARAPYSPLPMFPPAS 123

Query: 623 FGGMPYSPRPNINPYGYGF---QGPPPWDTGLIADNFASRKRRGGPDGLSEGDWICPKCD 453
           FGG+ Y PRP I+ YGYG+     PPPW  GLIADNFASRKRRGGPDGL EGDWICPKCD
Sbjct: 124 FGGINYGPRPRIDGYGYGYGFQSPPPPWVEGLIADNFASRKRRGGPDGLFEGDWICPKCD 183

Query: 452 NVNFAFRTTCNMKHCGAAR 396
           NVNF+FRTTCN+KHCG  +
Sbjct: 184 NVNFSFRTTCNIKHCGVVK 202


>ref|NP_001131360.1| uncharacterized protein LOC100192683 [Zea mays]
           gi|194691310|gb|ACF79739.1| unknown [Zea mays]
           gi|414590298|tpg|DAA40869.1| TPA: zn-finger, RanBP-type,
           containing protein [Zea mays]
          Length = 271

 Score =  253 bits (646), Expect = 6e-65
 Identities = 130/258 (50%), Positives = 151/258 (58%), Gaps = 20/258 (7%)
 Frame = -2

Query: 974 NRGSFGSKRSRNDVSRKDGDWTCTNCGNLNFSFRTVCNRGHCGAPRPSVTPPAQVM---- 807
           NRG+  SKR RNDVS ++GDW C  CGN+NFSFR VCNRG CGAPRPS +P  ++M    
Sbjct: 14  NRGAL-SKRLRNDVSVREGDWNCPQCGNVNFSFRNVCNRGACGAPRPSPSPSPRMMPAPP 72

Query: 806 SPYRNGPPQFXXXXXXXXXXXXGMSSRFGSPIPHSGLQYEYGLXXXXXXXXXXXXXXXP- 630
           +P  +  P F              S  +G P PH G++Y YG                  
Sbjct: 73  APGYDRLPLFYGGGGGAPSPISLGSGSYGGPYPHLGMRYGYGPPVGAPGSYGLFSSYGQP 132

Query: 629 GNFGGMPYSPRPNINPYGYGFQGPP-----PWDTGLIA---DNFASRKRRGGPDGLSEGD 474
           G   GM Y P P +  Y YGF+G P     PW  G IA   DN ASRKRRGGPDGLSEGD
Sbjct: 133 GPMSGMGYGPGPELGRYSYGFRGSPMPVSSPWSGGAIAENNDNIASRKRRGGPDGLSEGD 192

Query: 473 WICPKCDNVNFAFRTTCNMKHCGAAR-------AGSSQPNTSIPEGSWTCKKCGNLNYPF 315
           W CPKCDN+NF+FR TCNMK CGA R       + S + N   PEGSWTC +C NLNYPF
Sbjct: 193 WTCPKCDNINFSFRNTCNMKKCGAPRPTPGANTSSSRKDNKEAPEGSWTCPECNNLNYPF 252

Query: 314 RNVCNRKDCGSEKTASAN 261
           R+VCNRK C   K+A  N
Sbjct: 253 RSVCNRKGCSYNKSAPTN 270



 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 27/59 (45%), Positives = 30/59 (50%)
 Frame = -2

Query: 980 DGNRGSFGSKRSRNDVSRKDGDWTCTNCGNLNFSFRTVCNRGHCGAPRPSVTPPAQVMS 804
           + N      KR        +GDWTC  C N+NFSFR  CN   CGAPRP  TP A   S
Sbjct: 171 ENNDNIASRKRRGGPDGLSEGDWTCPKCDNINFSFRNTCNMKKCGAPRP--TPGANTSS 227


>gb|ACR37925.1| unknown [Zea mays] gi|414886722|tpg|DAA62736.1| TPA: zn-finger,
           RanBP-type, containing protein [Zea mays]
          Length = 273

 Score =  253 bits (645), Expect = 8e-65
 Identities = 132/260 (50%), Positives = 153/260 (58%), Gaps = 22/260 (8%)
 Frame = -2

Query: 974 NRGSFGSKRSRNDVSRKDGDWTCTNCGNLNFSFRTVCNRGHCGAPRPSVTPPAQVMS-PY 798
           NRG+  SKRSRNDVS ++GDW C  CGN+NFSFR VCNRG CGAPRPS +P  ++MS P 
Sbjct: 14  NRGAL-SKRSRNDVSVREGDWNCPQCGNVNFSFRNVCNRGACGAPRPSPSPSPRMMSGPP 72

Query: 797 RNG---PPQFXXXXXXXXXXXXGMSSRFGSPIPHSGLQYEYGLXXXXXXXXXXXXXXXP- 630
            +G    P F              +  +G+P PH G++Y YG                P 
Sbjct: 73  ASGYDRSPLFYGGGGGAPPPIPLGTGSYGAPYPHLGMRYGYGPPVGPPGSYGLFSSYGPP 132

Query: 629 GNFGGMPYSPRPNINPYGYGFQGPP-----PWDTGLIA---DNFASRKRRGGPDGLSEGD 474
           G   GM Y P P +  Y YGF+G P     PW  G +A   DN ASRKRRGGPDGLSEGD
Sbjct: 133 GPMSGMGYGPGPELGRYSYGFRGSPMPVSSPWSGGALAENNDNIASRKRRGGPDGLSEGD 192

Query: 473 WICPKCDNVNFAFRTTCNMKHCGAAR---------AGSSQPNTSIPEGSWTCKKCGNLNY 321
           W CPKCDN+NF+FR+TCNMK CGA R         +     N   PEGSWTC +C NLNY
Sbjct: 193 WTCPKCDNINFSFRSTCNMKKCGAPRPTPGGNTSSSRKDNSNKEAPEGSWTCPECNNLNY 252

Query: 320 PFRNVCNRKDCGSEKTASAN 261
           PFR VCNRK C   K A AN
Sbjct: 253 PFRTVCNRKGCSYSKPAPAN 272


Top