BLASTX nr result

ID: Glycyrrhiza23_contig00028270 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028270
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626928.1| NBS-containing resistance-like protein [Medi...    90   2e-16
ref|XP_003604607.1| TIR-NBS-LRR RCT1 resistance protein [Medicag...    87   1e-15
gb|ACF19650.1| TIR-NBS-LRR RCT1 resistance protein [Medicago tru...    87   1e-15
ref|XP_002272034.2| PREDICTED: TMV resistance protein N-like [Vi...    84   9e-15
emb|CAN61853.1| hypothetical protein VITISV_027841 [Vitis vinifera]    84   9e-15

>ref|XP_003626928.1| NBS-containing resistance-like protein [Medicago truncatula]
           gi|355520950|gb|AET01404.1| NBS-containing
           resistance-like protein [Medicago truncatula]
          Length = 1087

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 42/74 (56%), Positives = 58/74 (78%)
 Frame = -3

Query: 223 KPECICDVFLSFSRSDTGRSFVSHLYSALTRAGVLVFKADVNLQWGEDIAPSLIRAIEGS 44
           +P+ I DVF++F   DT ++FVSHLY+ALT AG+  F  D NL+ GE++ P L+RAI+GS
Sbjct: 9   RPQWIHDVFINFRGKDTRKTFVSHLYAALTDAGINTFLDDENLKKGEELGPELVRAIQGS 68

Query: 43  RISIIVFSKNYANS 2
           +I+I+VFSKNY NS
Sbjct: 69  QIAIVVFSKNYVNS 82


>ref|XP_003604607.1| TIR-NBS-LRR RCT1 resistance protein [Medicago truncatula]
           gi|355505662|gb|AES86804.1| TIR-NBS-LRR RCT1 resistance
           protein [Medicago truncatula]
          Length = 936

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 43/68 (63%), Positives = 54/68 (79%)
 Frame = -3

Query: 205 DVFLSFSRSDTGRSFVSHLYSALTRAGVLVFKADVNLQWGEDIAPSLIRAIEGSRISIIV 26
           DVFLSF   DT  SF+SHL S+L  AG+L+FK D +LQ G+ I+PSL+ AIE S+IS+IV
Sbjct: 38  DVFLSFRGEDTRASFISHLTSSLQNAGILIFKDDQSLQRGDHISPSLVHAIESSKISVIV 97

Query: 25  FSKNYANS 2
           FSKNYA+S
Sbjct: 98  FSKNYADS 105


>gb|ACF19650.1| TIR-NBS-LRR RCT1 resistance protein [Medicago truncatula]
          Length = 1098

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 43/68 (63%), Positives = 54/68 (79%)
 Frame = -3

Query: 205 DVFLSFSRSDTGRSFVSHLYSALTRAGVLVFKADVNLQWGEDIAPSLIRAIEGSRISIIV 26
           DVFLSF   DT  SF+SHL S+L  AG+L+FK D +LQ G+ I+PSL+ AIE S+IS+IV
Sbjct: 38  DVFLSFRGEDTRASFISHLTSSLQNAGILIFKDDQSLQRGDHISPSLVHAIESSKISVIV 97

Query: 25  FSKNYANS 2
           FSKNYA+S
Sbjct: 98  FSKNYADS 105


>ref|XP_002272034.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1233

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 44/83 (53%), Positives = 54/83 (65%)
 Frame = -3

Query: 250 SSPMKSMDRKPECICDVFLSFSRSDTGRSFVSHLYSALTRAGVLVFKADVNLQWGEDIAP 71
           SS +   D       DVFLSF   DT RSF  HLY+AL   GV  F+ D  L+ G++IAP
Sbjct: 3   SSMINQKDSASHWNYDVFLSFRGEDTRRSFTDHLYAALVEKGVRTFRDDEELERGKEIAP 62

Query: 70  SLIRAIEGSRISIIVFSKNYANS 2
            L++AIE SRIS++VFSKNYA S
Sbjct: 63  ELLKAIEESRISVVVFSKNYARS 85


>emb|CAN61853.1| hypothetical protein VITISV_027841 [Vitis vinifera]
          Length = 1244

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 44/83 (53%), Positives = 54/83 (65%)
 Frame = -3

Query: 250 SSPMKSMDRKPECICDVFLSFSRSDTGRSFVSHLYSALTRAGVLVFKADVNLQWGEDIAP 71
           SS +   D       DVFLSF   DT RSF  HLY+AL   GV  F+ D  L+ G++IAP
Sbjct: 3   SSMINQKDSASHWNYDVFLSFRGEDTRRSFTDHLYAALVEKGVRTFRDDEELERGKEIAP 62

Query: 70  SLIRAIEGSRISIIVFSKNYANS 2
            L++AIE SRIS++VFSKNYA S
Sbjct: 63  ELLKAIEESRISVVVFSKNYARS 85


Top