BLASTX nr result

ID: Glycyrrhiza23_contig00014456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014456
         (955 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522624.1| PREDICTED: uncharacterized RNA-binding prote...   230   4e-58
ref|XP_003526418.1| PREDICTED: uncharacterized RNA-binding prote...   228   2e-57
ref|XP_003603428.1| Zinc finger protein-like protein [Medicago t...   212   9e-53
ref|XP_004138734.1| PREDICTED: uncharacterized RNA-binding prote...   204   2e-50
ref|XP_002515546.1| protein with unknown function [Ricinus commu...   202   1e-49

>ref|XP_003522624.1| PREDICTED: uncharacterized RNA-binding protein C17H9.04c-like
           [Glycine max]
          Length = 159

 Score =  230 bits (586), Expect = 4e-58
 Identities = 110/151 (72%), Positives = 111/151 (73%), Gaps = 1/151 (0%)
 Frame = -2

Query: 873 MSRPGDWNCRTCNHLNFQRRESCQRCGEPKXXXXXXXXXXXXXXXXXXXXF-TTGPDVRP 697
           MSRPGDWNCRTCNHLNFQRRESCQRCGEP+                      TTGPDVRP
Sbjct: 1   MSRPGDWNCRTCNHLNFQRRESCQRCGEPRSGGGGDYGGGFGGGRGSSSFGFTTGPDVRP 60

Query: 696 GDWYCTVGNCGAHNFASRSSCFKCGAPKEDSXXXXXXXXDMTRMRPXXXXXXXGSTRPGW 517
           GDWYCTVGNCGAHNFASRSSCFKCGAPKEDS        DM RMRP        S RPGW
Sbjct: 61  GDWYCTVGNCGAHNFASRSSCFKCGAPKEDS-SAGPFDADMPRMRP-YGFGGGSSARPGW 118

Query: 516 KSGDWICTRSGCNEHNFANRMECYRCNAPRD 424
           KSGDWICTRSGCNEHNFANRMECYRCNAPRD
Sbjct: 119 KSGDWICTRSGCNEHNFANRMECYRCNAPRD 149



 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 33/93 (35%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
 Frame = -2

Query: 867 RPGDWNCRT--CNHLNFQRRESCQRCGEPKXXXXXXXXXXXXXXXXXXXXF---TTGPDV 703
           RPGDW C    C   NF  R SC +CG PK                        +  P  
Sbjct: 59  RPGDWYCTVGNCGAHNFASRSSCFKCGAPKEDSSAGPFDADMPRMRPYGFGGGSSARPGW 118

Query: 702 RPGDWYCTVGNCGAHNFASRSSCFKCGAPKEDS 604
           + GDW CT   C  HNFA+R  C++C AP++ S
Sbjct: 119 KSGDWICTRSGCNEHNFANRMECYRCNAPRDSS 151


>ref|XP_003526418.1| PREDICTED: uncharacterized RNA-binding protein C17H9.04c-like
           [Glycine max]
          Length = 163

 Score =  228 bits (580), Expect = 2e-57
 Identities = 109/154 (70%), Positives = 111/154 (72%), Gaps = 4/154 (2%)
 Frame = -2

Query: 873 MSRPGDWNCRTCNHLNFQRRESCQRCGEPKXXXXXXXXXXXXXXXXXXXXF-TTGPDVRP 697
           M+RPGDWNCRTCNHLNFQRRESCQRCGEP+                      TTGPDVRP
Sbjct: 1   MNRPGDWNCRTCNHLNFQRRESCQRCGEPRSGGGDYGGGFGGGRGSSSFGGFTTGPDVRP 60

Query: 696 GDWYCTVGNCGAHNFASRSSCFKCGAPKEDSXXXXXXXXDMTRMRP---XXXXXXXGSTR 526
           GDWYCTVGNCGAHNFASRSSCFKCGAPKEDS        DM RMRP           S R
Sbjct: 61  GDWYCTVGNCGAHNFASRSSCFKCGAPKEDS-SAGPFDVDMPRMRPFGFGGSGGGGSSAR 119

Query: 525 PGWKSGDWICTRSGCNEHNFANRMECYRCNAPRD 424
           PGWKSGDWICTRSGCNEHNFANRMECYRCNAPRD
Sbjct: 120 PGWKSGDWICTRSGCNEHNFANRMECYRCNAPRD 153



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 34/97 (35%), Positives = 42/97 (43%), Gaps = 9/97 (9%)
 Frame = -2

Query: 867 RPGDWNCRT--CNHLNFQRRESCQRCGEPKXXXXXXXXXXXXXXXXXXXXFTTG------ 712
           RPGDW C    C   NF  R SC +CG PK                      +G      
Sbjct: 59  RPGDWYCTVGNCGAHNFASRSSCFKCGAPKEDSSAGPFDVDMPRMRPFGFGGSGGGGSSA 118

Query: 711 -PDVRPGDWYCTVGNCGAHNFASRSSCFKCGAPKEDS 604
            P  + GDW CT   C  HNFA+R  C++C AP++ S
Sbjct: 119 RPGWKSGDWICTRSGCNEHNFANRMECYRCNAPRDSS 155


>ref|XP_003603428.1| Zinc finger protein-like protein [Medicago truncatula]
           gi|355492476|gb|AES73679.1| Zinc finger protein-like
           protein [Medicago truncatula]
          Length = 185

 Score =  212 bits (540), Expect = 9e-53
 Identities = 101/160 (63%), Positives = 104/160 (65%), Gaps = 10/160 (6%)
 Frame = -2

Query: 873 MSRPGDWNCRTCNHLNFQRRESCQRCGEPKXXXXXXXXXXXXXXXXXXXXF-----TTGP 709
           MSRPGDWNCRTCNHLNFQRRESCQRCGE +                          TTGP
Sbjct: 1   MSRPGDWNCRTCNHLNFQRRESCQRCGESRMTSGCGAVDFGGSFLGGRGSSSPFPFTTGP 60

Query: 708 DVRPGDWYCTVGNCGAHNFASRSSCFKCGAPKEDSXXXXXXXXDMTRMRPXXXXXXXG-- 535
           DVRPGDWYCTVGNCGAHNFASRSSCFKCGAPK+              +R           
Sbjct: 61  DVRPGDWYCTVGNCGAHNFASRSSCFKCGAPKDIDTFSSDSSDMPRLLRSPYGFGAGSAG 120

Query: 534 ---STRPGWKSGDWICTRSGCNEHNFANRMECYRCNAPRD 424
              STRPGWKSGDWICTRSGCNEHNFANRMECYRCN PRD
Sbjct: 121 GGASTRPGWKSGDWICTRSGCNEHNFANRMECYRCNGPRD 160


>ref|XP_004138734.1| PREDICTED: uncharacterized RNA-binding protein C17H9.04c-like
           [Cucumis sativus] gi|449525766|ref|XP_004169887.1|
           PREDICTED: uncharacterized RNA-binding protein
           C17H9.04c-like [Cucumis sativus]
          Length = 155

 Score =  204 bits (520), Expect = 2e-50
 Identities = 96/150 (64%), Positives = 103/150 (68%)
 Frame = -2

Query: 873 MSRPGDWNCRTCNHLNFQRRESCQRCGEPKXXXXXXXXXXXXXXXXXXXXFTTGPDVRPG 694
           MSRPGDWNCR+CNHLNFQRR+SCQRCG+P+                    FTTGPDVRPG
Sbjct: 1   MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGSYGGGRVGGSSSFGFTTGPDVRPG 60

Query: 693 DWYCTVGNCGAHNFASRSSCFKCGAPKEDSXXXXXXXXDMTRMRPXXXXXXXGSTRPGWK 514
           DWYCTV NCGAHNFASRS CFKCGA K D         D+ RMR         S RPGWK
Sbjct: 61  DWYCTVANCGAHNFASRSICFKCGATK-DETSAAAYDGDLPRMR--GFNFGGASNRPGWK 117

Query: 513 SGDWICTRSGCNEHNFANRMECYRCNAPRD 424
           SGDWIC RS CNEHNFA+R EC+RCNAPRD
Sbjct: 118 SGDWICARSDCNEHNFASRRECFRCNAPRD 147



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 31/92 (33%), Positives = 39/92 (42%), Gaps = 4/92 (4%)
 Frame = -2

Query: 867 RPGDWNCRT--CNHLNFQRRESCQRCGEPKXXXXXXXXXXXXXXXXXXXXF--TTGPDVR 700
           RPGDW C    C   NF  R  C +CG  K                       +  P  +
Sbjct: 58  RPGDWYCTVANCGAHNFASRSICFKCGATKDETSAAAYDGDLPRMRGFNFGGASNRPGWK 117

Query: 699 PGDWYCTVGNCGAHNFASRSSCFKCGAPKEDS 604
            GDW C   +C  HNFASR  CF+C AP++ +
Sbjct: 118 SGDWICARSDCNEHNFASRRECFRCNAPRDSN 149


>ref|XP_002515546.1| protein with unknown function [Ricinus communis]
           gi|223545490|gb|EEF46995.1| protein with unknown
           function [Ricinus communis]
          Length = 154

 Score =  202 bits (513), Expect = 1e-49
 Identities = 96/150 (64%), Positives = 106/150 (70%)
 Frame = -2

Query: 873 MSRPGDWNCRTCNHLNFQRRESCQRCGEPKXXXXXXXXXXXXXXXXXXXXFTTGPDVRPG 694
           MSRPGDWNCR+C HLNFQRR+SCQRC EP+                    FT GPDVRPG
Sbjct: 1   MSRPGDWNCRSCQHLNFQRRDSCQRCREPRPGERGDHYSSFGGRGSSSFGFT-GPDVRPG 59

Query: 693 DWYCTVGNCGAHNFASRSSCFKCGAPKEDSXXXXXXXXDMTRMRPXXXXXXXGSTRPGWK 514
           DWYCT GNCGAHNFASRSSCFKCGA K++S        +M+RMR         ++R GWK
Sbjct: 60  DWYCTFGNCGAHNFASRSSCFKCGASKDES--SGGFDGEMSRMR-GFGFGSGSTSRSGWK 116

Query: 513 SGDWICTRSGCNEHNFANRMECYRCNAPRD 424
           SGDWICTRSGCNEHNFA+R ECYRCNAPRD
Sbjct: 117 SGDWICTRSGCNEHNFASRTECYRCNAPRD 146


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