BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00008186
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594555.1| Pentatricopeptide repeat-containing protein ...   232   2e-59
ref|XP_003547332.1| PREDICTED: pentatricopeptide repeat-containi...   223   1e-56
ref|XP_002515948.1| pentatricopeptide repeat-containing protein,...   214   6e-54
emb|CBI36037.3| unnamed protein product [Vitis vinifera]              213   1e-53
ref|XP_002277683.2| PREDICTED: pentatricopeptide repeat-containi...   206   2e-51

>ref|XP_003594555.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355483603|gb|AES64806.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  232 bits (592), Expect = 2e-59
 Identities = 112/138 (81%), Positives = 122/138 (88%)
 Frame = -3

Query: 419 SLLDDMDRRCLRGSISTVNILVGFLEDLDRCIGLVKKWDLTLNAYTYKCFLQAYLRSHDS 240
           SLLDDM++R ++GSISTVNIL+GF  DLDRC+GLVKKW L  NAY+YKC LQ YLR  D 
Sbjct: 145 SLLDDMEKRGVKGSISTVNILIGFFGDLDRCVGLVKKWGLRFNAYSYKCLLQGYLRLRDC 204

Query: 239 DKAFHVYLDMQRRGYKLDIFAYNMLLDALAKDEKVDKAYKVFEDMKRRHCEPDEFTYTIM 60
           DKAF VYLDM R GY LDIFA+NMLLDALAKD+KVDKAYKVFEDMKRRHCEPD FTYTIM
Sbjct: 205 DKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDMKRRHCEPDTFTYTIM 264

Query: 59  IRMTGKSGKTDESLALFQ 6
           IRMTGK+GKTDESLALFQ
Sbjct: 265 IRMTGKAGKTDESLALFQ 282



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 38/147 (25%), Positives = 75/147 (51%), Gaps = 6/147 (4%)
 Frame = -3

Query: 425 ALSLLDDMDRRCLRGSI---STVNILVGFLEDLDRCIGLVKKWDLT---LNAYTYKCFLQ 264
           A+ LL+    +C+       +TV   +G L+ +     L +K        + +TY   + 
Sbjct: 414 AIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPPPDIFTYNILIS 473

Query: 263 AYLRSHDSDKAFHVYLDMQRRGYKLDIFAYNMLLDALAKDEKVDKAYKVFEDMKRRHCEP 84
           +Y R+   D A  ++ +++    + D+ +YN L++ L K+  VD+A+  F++M+ +   P
Sbjct: 474 SYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNP 533

Query: 83  DEFTYTIMIRMTGKSGKTDESLALFQE 3
           D  TY+ +I   GK+ K + + +LF E
Sbjct: 534 DVVTYSTLIECFGKTDKVEMACSLFDE 560



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 38/146 (26%), Positives = 69/146 (47%), Gaps = 6/146 (4%)
 Frame = -3

Query: 428 HALSLLDDMDRRCLRGSISTVNILVGFLEDLDRCIGLVKKWDLTLNA------YTYKCFL 267
           H   L + M +      I T NIL+       R    VK ++   N+       +Y   +
Sbjct: 448 HIHDLYEKMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLI 507

Query: 266 QAYLRSHDSDKAFHVYLDMQRRGYKLDIFAYNMLLDALAKDEKVDKAYKVFEDMKRRHCE 87
               ++ D D+A   + +MQ +G   D+  Y+ L++   K +KV+ A  +F++M    C 
Sbjct: 508 NCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAEGCS 567

Query: 86  PDEFTYTIMIRMTGKSGKTDESLALF 9
           P+  TY I++    +SG+T E++ L+
Sbjct: 568 PNLVTYNILLDCLERSGRTAEAVDLY 593


>ref|XP_003547332.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  223 bits (569), Expect = 1e-56
 Identities = 115/143 (80%), Positives = 122/143 (85%), Gaps = 3/143 (2%)
 Frame = -3

Query: 425 ALSLLDDMDRRCLRGSISTVNILVGFL---EDLDRCIGLVKKWDLTLNAYTYKCFLQAYL 255
           A SLL DMDRR +RGSISTVNILVGF    EDL+RC+ LVKKWDL LNAYTYKC LQAYL
Sbjct: 149 ARSLLHDMDRRAVRGSISTVNILVGFFGAGEDLERCVSLVKKWDLRLNAYTYKCLLQAYL 208

Query: 254 RSHDSDKAFHVYLDMQRRGYKLDIFAYNMLLDALAKDEKVDKAYKVFEDMKRRHCEPDEF 75
           R+ DS  AF VYLDM R GY+LDIF YNMLLDALAKDEKV  +YKVFEDMKRRHCEPD F
Sbjct: 209 RALDSSTAFRVYLDMIRHGYRLDIFGYNMLLDALAKDEKV-CSYKVFEDMKRRHCEPDVF 267

Query: 74  TYTIMIRMTGKSGKTDESLALFQ 6
           TYTIMIRMTGKS KTDE+LALFQ
Sbjct: 268 TYTIMIRMTGKSSKTDEALALFQ 290



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/125 (27%), Positives = 64/125 (51%)
 Frame = -3

Query: 383 GSISTVNILVGFLEDLDRCIGLVKKWDLTLNAYTYKCFLQAYLRSHDSDKAFHVYLDMQR 204
           G    V+I V F E+L+         D   +  +Y   +    ++ D D+A   + +MQ 
Sbjct: 484 GRAGRVDIAVKFFEELENS-------DCKPDVISYNSLINCLGKNGDVDEAHMRFKEMQE 536

Query: 203 RGYKLDIFAYNMLLDALAKDEKVDKAYKVFEDMKRRHCEPDEFTYTIMIRMTGKSGKTDE 24
           +G   D+  Y+ L++   K +KV+ A ++F++M    C P+  TY I++    +SG+T E
Sbjct: 537 KGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEECTPNLITYNILLDCLERSGRTAE 596

Query: 23  SLALF 9
           ++ L+
Sbjct: 597 AVDLY 601



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/100 (31%), Positives = 50/100 (50%)
 Frame = -3

Query: 302 LTLNAYTYKCFLQAYLRSHDSDKAFHVYLDMQRRGYKLDIFAYNMLLDALAKDEKVDKAY 123
           +T +   Y     A  R         +Y  M++ G   DIF YN+L+ +  +  +VD A 
Sbjct: 434 ITTDTIMYNTVFTALGRLKQISHIHDLYEKMKQDGPPPDIFTYNILISSFGRAGRVDIAV 493

Query: 122 KVFEDMKRRHCEPDEFTYTIMIRMTGKSGKTDESLALFQE 3
           K FE+++   C+PD  +Y  +I   GK+G  DE+   F+E
Sbjct: 494 KFFEELENSDCKPDVISYNSLINCLGKNGDVDEAHMRFKE 533



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/95 (29%), Positives = 53/95 (55%)
 Frame = -3

Query: 287 YTYKCFLQAYLRSHDSDKAFHVYLDMQRRGYKLDIFAYNMLLDALAKDEKVDKAYKVFED 108
           +TY   + ++ R+   D A   + +++    K D+ +YN L++ L K+  VD+A+  F++
Sbjct: 474 FTYNILISSFGRAGRVDIAVKFFEELENSDCKPDVISYNSLINCLGKNGDVDEAHMRFKE 533

Query: 107 MKRRHCEPDEFTYTIMIRMTGKSGKTDESLALFQE 3
           M+ +   PD  TY+ +I   GK+ K + +  LF E
Sbjct: 534 MQEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDE 568


>ref|XP_002515948.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544853|gb|EEF46368.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 706

 Score =  214 bits (545), Expect = 6e-54
 Identities = 100/137 (72%), Positives = 121/137 (88%), Gaps = 3/137 (2%)
 Frame = -3

Query: 404 MDRRCLRGSISTVNILVGFL---EDLDRCIGLVKKWDLTLNAYTYKCFLQAYLRSHDSDK 234
           MD+  +RG+ISTVNIL+GF    EDL+RCIGL++KWDL +N YTYKC +QAYLRS DSD 
Sbjct: 1   MDKNGVRGTISTVNILIGFFGDGEDLERCIGLIEKWDLKMNGYTYKCLVQAYLRSCDSDN 60

Query: 233 AFHVYLDMQRRGYKLDIFAYNMLLDALAKDEKVDKAYKVFEDMKRRHCEPDEFTYTIMIR 54
            F VYL+M+R+GY LDIFA+NMLLDALAKD+KVD+A+KVFEDMK++HCEPDE+TYTIMIR
Sbjct: 61  GFRVYLEMKRKGYTLDIFAFNMLLDALAKDQKVDQAFKVFEDMKKKHCEPDEYTYTIMIR 120

Query: 53  MTGKSGKTDESLALFQE 3
           MTG+ GK DESLALF+E
Sbjct: 121 MTGRIGKLDESLALFEE 137



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 34/127 (26%), Positives = 66/127 (51%), Gaps = 3/127 (2%)
 Frame = -3

Query: 374 STVNILVGFLEDLDRCIGLVKKWDLT---LNAYTYKCFLQAYLRSHDSDKAFHVYLDMQR 204
           +TV   +G L+ +     L +K  L     + +TY   + ++ R+    +A  ++ +++ 
Sbjct: 288 NTVFTALGRLKQISHLYDLYEKMKLDGPLPDIFTYNILISSFGRAGKVYEAIKIFEELEN 347

Query: 203 RGYKLDIFAYNMLLDALAKDEKVDKAYKVFEDMKRRHCEPDEFTYTIMIRMTGKSGKTDE 24
              K DI +YN L++ L K+  +D+A+  F +M+ +   PD  TY+ +I   GK+ K + 
Sbjct: 348 SDCKPDIISYNSLINCLGKNGDLDEAHIRFREMQEKGLNPDVVTYSTLIECFGKTDKVEM 407

Query: 23  SLALFQE 3
           +  LF E
Sbjct: 408 ACRLFDE 414



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/108 (28%), Positives = 54/108 (50%)
 Frame = -3

Query: 326 IGLVKKWDLTLNAYTYKCFLQAYLRSHDSDKAFHVYLDMQRRGYKLDIFAYNMLLDALAK 147
           +G + +  +  +   Y     A  R       + +Y  M+  G   DIF YN+L+ +  +
Sbjct: 272 LGKIHEKGINTDTIMYNTVFTALGRLKQISHLYDLYEKMKLDGPLPDIFTYNILISSFGR 331

Query: 146 DEKVDKAYKVFEDMKRRHCEPDEFTYTIMIRMTGKSGKTDESLALFQE 3
             KV +A K+FE+++   C+PD  +Y  +I   GK+G  DE+   F+E
Sbjct: 332 AGKVYEAIKIFEELENSDCKPDIISYNSLINCLGKNGDLDEAHIRFRE 379



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/129 (25%), Positives = 65/129 (50%), Gaps = 6/129 (4%)
 Frame = -3

Query: 377 ISTVNILVGFLEDLDRCIGLVKKWDLTLNA------YTYKCFLQAYLRSHDSDKAFHVYL 216
           I T NIL+       +    +K ++   N+       +Y   +    ++ D D+A   + 
Sbjct: 319 IFTYNILISSFGRAGKVYEAIKIFEELENSDCKPDIISYNSLINCLGKNGDLDEAHIRFR 378

Query: 215 DMQRRGYKLDIFAYNMLLDALAKDEKVDKAYKVFEDMKRRHCEPDEFTYTIMIRMTGKSG 36
           +MQ +G   D+  Y+ L++   K +KV+ A ++F++M    C P+  TY I++    +SG
Sbjct: 379 EMQEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCFPNIVTYNILLDCLERSG 438

Query: 35  KTDESLALF 9
           +T E++ L+
Sbjct: 439 RTAEAVDLY 447


>emb|CBI36037.3| unnamed protein product [Vitis vinifera]
          Length = 646

 Score =  213 bits (543), Expect = 1e-53
 Identities = 101/142 (71%), Positives = 122/142 (85%), Gaps = 3/142 (2%)
 Frame = -3

Query: 419 SLLDDMDRRCLRGSISTVNILVGFL---EDLDRCIGLVKKWDLTLNAYTYKCFLQAYLRS 249
           ++LDDM+R  +RGSIST+NIL+G      D++RC  LVKKWDL +N YTYKC LQA+LRS
Sbjct: 179 AILDDMERCGVRGSISTINILIGIFGGGADVERCFDLVKKWDLQMNCYTYKCLLQAHLRS 238

Query: 248 HDSDKAFHVYLDMQRRGYKLDIFAYNMLLDALAKDEKVDKAYKVFEDMKRRHCEPDEFTY 69
           ++S+KAF VY++++RRGYKLDIFAYNMLLDALAKD KVD+ Y VF+DMKR+HCEPDE+TY
Sbjct: 239 NNSNKAFEVYVELRRRGYKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTY 298

Query: 68  TIMIRMTGKSGKTDESLALFQE 3
           TIMIRMTGK GK DESL LFQE
Sbjct: 299 TIMIRMTGKIGKADESLTLFQE 320



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/100 (28%), Positives = 55/100 (55%)
 Frame = -3

Query: 302 LTLNAYTYKCFLQAYLRSHDSDKAFHVYLDMQRRGYKLDIFAYNMLLDALAKDEKVDKAY 123
           ++ +   Y   L A  +   +     +Y  M++ G   DIF+YN+L+ +  +  +V++A 
Sbjct: 433 ISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAV 492

Query: 122 KVFEDMKRRHCEPDEFTYTIMIRMTGKSGKTDESLALFQE 3
           K+FE+++   C+PD  ++  +I   GK+G  DE+   F+E
Sbjct: 493 KIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKE 532



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/95 (26%), Positives = 54/95 (56%)
 Frame = -3

Query: 287 YTYKCFLQAYLRSHDSDKAFHVYLDMQRRGYKLDIFAYNMLLDALAKDEKVDKAYKVFED 108
           ++Y   + ++ R+   ++A  ++ +++    K DI ++N L++ L K+  +D+A+  F++
Sbjct: 473 FSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKE 532

Query: 107 MKRRHCEPDEFTYTIMIRMTGKSGKTDESLALFQE 3
           M+     PD  TY+ +I   GK+ K + +  LF E
Sbjct: 533 MREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDE 567



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/82 (29%), Positives = 48/82 (58%)
 Frame = -3

Query: 254 RSHDSDKAFHVYLDMQRRGYKLDIFAYNMLLDALAKDEKVDKAYKVFEDMKRRHCEPDEF 75
           ++ D D+A   + +M+  G   D+  Y+ L++   K +KV+ A ++F++M    C P+  
Sbjct: 519 KNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIV 578

Query: 74  TYTIMIRMTGKSGKTDESLALF 9
           TY I++    +SG+T E++ L+
Sbjct: 579 TYNILLDCLERSGRTAEAVDLY 600


>ref|XP_002277683.2| PREDICTED: pentatricopeptide repeat-containing protein At5g39710
           [Vitis vinifera]
          Length = 990

 Score =  206 bits (524), Expect = 2e-51
 Identities = 98/137 (71%), Positives = 117/137 (85%), Gaps = 3/137 (2%)
 Frame = -3

Query: 404 MDRRCLRGSISTVNILVGFL---EDLDRCIGLVKKWDLTLNAYTYKCFLQAYLRSHDSDK 234
           M+R  +RGSIST+NIL+G      D++RC  LVKKWDL +N YTYKC LQA+LRS++S+K
Sbjct: 1   MERCGVRGSISTINILIGIFGGGADVERCFDLVKKWDLQMNCYTYKCLLQAHLRSNNSNK 60

Query: 233 AFHVYLDMQRRGYKLDIFAYNMLLDALAKDEKVDKAYKVFEDMKRRHCEPDEFTYTIMIR 54
           AF VY++++RRGYKLDIFAYNMLLDALAKD KVD+ Y VF+DMKR+HCEPDE+TYTIMIR
Sbjct: 61  AFEVYVELRRRGYKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIR 120

Query: 53  MTGKSGKTDESLALFQE 3
           MTGK GK DESL LFQE
Sbjct: 121 MTGKIGKADESLTLFQE 137



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/100 (28%), Positives = 55/100 (55%)
 Frame = -3

Query: 302 LTLNAYTYKCFLQAYLRSHDSDKAFHVYLDMQRRGYKLDIFAYNMLLDALAKDEKVDKAY 123
           ++ +   Y   L A  +   +     +Y  M++ G   DIF+YN+L+ +  +  +V++A 
Sbjct: 280 ISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAV 339

Query: 122 KVFEDMKRRHCEPDEFTYTIMIRMTGKSGKTDESLALFQE 3
           K+FE+++   C+PD  ++  +I   GK+G  DE+   F+E
Sbjct: 340 KIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKE 379



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/95 (26%), Positives = 54/95 (56%)
 Frame = -3

Query: 287 YTYKCFLQAYLRSHDSDKAFHVYLDMQRRGYKLDIFAYNMLLDALAKDEKVDKAYKVFED 108
           ++Y   + ++ R+   ++A  ++ +++    K DI ++N L++ L K+  +D+A+  F++
Sbjct: 320 FSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKE 379

Query: 107 MKRRHCEPDEFTYTIMIRMTGKSGKTDESLALFQE 3
           M+     PD  TY+ +I   GK+ K + +  LF E
Sbjct: 380 MREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDE 414



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/91 (28%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
 Frame = -3

Query: 287 YTYKCFLQAYLRSHDSDKAFHVYLDMQRRGYKLDIFAYNMLLDALAKDEKVDKAYKVFED 108
           YTY   ++   +   +D++  ++ +M  +GY  ++ AYN ++ ALA +  VDK   +F  
Sbjct: 113 YTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSK 172

Query: 107 MKRRHCEPDEFTYTIMIRM---TGKSGKTDE 24
           M   +C P+ FT+++++ +    G+ G+ DE
Sbjct: 173 MVENNCRPNGFTFSVILNVLVAEGQLGRLDE 203



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/82 (29%), Positives = 48/82 (58%)
 Frame = -3

Query: 254 RSHDSDKAFHVYLDMQRRGYKLDIFAYNMLLDALAKDEKVDKAYKVFEDMKRRHCEPDEF 75
           ++ D D+A   + +M+  G   D+  Y+ L++   K +KV+ A ++F++M    C P+  
Sbjct: 366 KNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIV 425

Query: 74  TYTIMIRMTGKSGKTDESLALF 9
           TY I++    +SG+T E++ L+
Sbjct: 426 TYNILLDCLERSGRTAEAVDLY 447