BLASTX nr result
ID: Gardenia21_contig00049828
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Gardenia21_contig00049828
(280 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009405261.1| PREDICTED: pentatricopeptide repeat-containi... 76 1e-14
ref|XP_008786397.1| PREDICTED: pentatricopeptide repeat-containi... 76 2e-14
ref|XP_010030710.1| PREDICTED: pentatricopeptide repeat-containi... 75 2e-13
ref|XP_003632122.2| PREDICTED: pentatricopeptide repeat-containi... 72 4e-13
gb|KMZ76222.1| Pentatricopeptide repeat-containing protein [Zost... 71 4e-13
ref|XP_010930473.1| PREDICTED: pentatricopeptide repeat-containi... 70 1e-12
ref|XP_006361267.1| PREDICTED: pentatricopeptide repeat-containi... 69 1e-11
emb|CBI15839.3| unnamed protein product [Vitis vinifera] 62 4e-10
gb|KCW55705.1| hypothetical protein EUGRSUZ_I01550 [Eucalyptus g... 62 2e-09
ref|XP_011628652.1| PREDICTED: pentatricopeptide repeat-containi... 62 2e-09
ref|XP_012489426.1| PREDICTED: pentatricopeptide repeat-containi... 59 7e-07
ref|XP_010045597.1| PREDICTED: pentatricopeptide repeat-containi... 59 1e-06
gb|KCW83681.1| hypothetical protein EUGRSUZ_B00560 [Eucalyptus g... 59 1e-06
ref|XP_009381414.1| PREDICTED: pentatricopeptide repeat-containi... 59 1e-06
ref|XP_008234306.1| PREDICTED: pentatricopeptide repeat-containi... 52 2e-06
ref|XP_010106807.1| hypothetical protein L484_005353 [Morus nota... 49 2e-06
emb|CDP00315.1| unnamed protein product [Coffea canephora] 53 3e-06
ref|XP_010061651.1| PREDICTED: pentatricopeptide repeat-containi... 52 3e-06
gb|KCW90768.1| hypothetical protein EUGRSUZ_A02839 [Eucalyptus g... 52 3e-06
ref|XP_011623546.1| PREDICTED: pentatricopeptide repeat-containi... 56 4e-06
>ref|XP_009405261.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Musa acuminata subsp. malaccensis]
Length = 688
Score = 75.9 bits (185), Expect(2) = 1e-14
Identities = 36/57 (63%), Positives = 42/57 (73%)
Frame = -1
Query: 280 FVRMGAARNAVTSRTMIRGYVHSHEFARAIDLFEKMQAECVRPTEVTMASLLSACGH 110
F R+G A+N+VT TMI GY+H EF A+ +F MQ E VRPTEVTMASLLSAC H
Sbjct: 271 FDRLGLAKNSVTWNTMISGYLHRREFGTAVSMFRSMQMENVRPTEVTMASLLSACAH 327
Score = 30.4 bits (67), Expect(2) = 1e-14
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -3
Query: 83 IHTXXXXXXXXIDVVLGNTHIDMYWKC 3
IH +DVVLGN IDMY+KC
Sbjct: 337 IHAYIRNHQLKMDVVLGNALIDMYFKC 363
>ref|XP_008786397.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Phoenix dactylifera]
Length = 579
Score = 75.9 bits (185), Expect(2) = 2e-14
Identities = 36/57 (63%), Positives = 43/57 (75%)
Frame = -1
Query: 280 FVRMGAARNAVTSRTMIRGYVHSHEFARAIDLFEKMQAECVRPTEVTMASLLSACGH 110
F RMG+A+N+VT TMI GY+H EF+ + LF+ MQ E VRPTEVTM SLLSAC H
Sbjct: 162 FDRMGSAKNSVTWNTMISGYLHHREFSMVLSLFQVMQVENVRPTEVTMVSLLSACAH 218
Score = 29.3 bits (64), Expect(2) = 2e-14
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -3
Query: 83 IHTXXXXXXXXIDVVLGNTHIDMYWKC 3
+H IDV+LGN IDMY+KC
Sbjct: 228 LHAFIRNHRLRIDVILGNALIDMYFKC 254
>ref|XP_010030710.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
[Eucalyptus grandis]
Length = 1024
Score = 75.1 bits (183), Expect(2) = 2e-13
Identities = 37/57 (64%), Positives = 43/57 (75%)
Frame = -1
Query: 280 FVRMGAARNAVTSRTMIRGYVHSHEFARAIDLFEKMQAECVRPTEVTMASLLSACGH 110
FVRMG ARN+VT TMI GYV EF +AI F++M+ E V+PTEVTM SLLSAC H
Sbjct: 608 FVRMGTARNSVTWNTMISGYVQCKEFGKAIATFQEMRLENVKPTEVTMISLLSACAH 664
Score = 26.9 bits (58), Expect(2) = 2e-13
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -3
Query: 83 IHTXXXXXXXXIDVVLGNTHIDMYWKC 3
IH ID VLGN IDMY KC
Sbjct: 674 IHDYIRRKRLKIDAVLGNALIDMYSKC 700
>ref|XP_003632122.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 678
Score = 72.4 bits (176), Expect(2) = 4e-13
Identities = 35/57 (61%), Positives = 43/57 (75%)
Frame = -1
Query: 280 FVRMGAARNAVTSRTMIRGYVHSHEFARAIDLFEKMQAECVRPTEVTMASLLSACGH 110
F+ MG+ARN+VT TMI YV EF AI +F++MQ+E V+PTEVTM SLLSAC H
Sbjct: 262 FLLMGSARNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAH 318
Score = 28.5 bits (62), Expect(2) = 4e-13
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -3
Query: 83 IHTXXXXXXXXIDVVLGNTHIDMYWKC 3
IH IDVVLGN IDMY KC
Sbjct: 328 IHGYIRTKRLKIDVVLGNALIDMYCKC 354
>gb|KMZ76222.1| Pentatricopeptide repeat-containing protein [Zostera marina]
Length = 578
Score = 70.9 bits (172), Expect(2) = 4e-13
Identities = 37/57 (64%), Positives = 41/57 (71%)
Frame = -1
Query: 280 FVRMGAARNAVTSRTMIRGYVHSHEFARAIDLFEKMQAECVRPTEVTMASLLSACGH 110
F RMG+A+N+VT TMI GYVH EF A LF+KMQ E VR TEVTM LLSAC H
Sbjct: 161 FERMGSAKNSVTWNTMISGYVHLREFQVATLLFQKMQVENVRFTEVTMVCLLSACAH 217
Score = 30.0 bits (66), Expect(2) = 4e-13
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -3
Query: 83 IHTXXXXXXXXIDVVLGNTHIDMYWKC 3
IH +DVVLGN IDMY+KC
Sbjct: 227 IHGYIKNHRIKVDVVLGNALIDMYYKC 253
>ref|XP_010930473.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Elaeis guineensis]
Length = 685
Score = 69.7 bits (169), Expect(2) = 1e-12
Identities = 34/57 (59%), Positives = 41/57 (71%)
Frame = -1
Query: 280 FVRMGAARNAVTSRTMIRGYVHSHEFARAIDLFEKMQAECVRPTEVTMASLLSACGH 110
F RMG A+N+VT T+I +H EFA A+ +F+ MQ E VRPTEVTM SLLSAC H
Sbjct: 268 FDRMGLAKNSVTWNTVISACLHHREFAMALSMFQVMQVENVRPTEVTMVSLLSACAH 324
Score = 29.6 bits (65), Expect(2) = 1e-12
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -3
Query: 83 IHTXXXXXXXXIDVVLGNTHIDMYWKC 3
+H IDVVLGN IDMY+KC
Sbjct: 334 LHAYIRNHRLKIDVVLGNALIDMYFKC 360
>ref|XP_006361267.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Solanum tuberosum]
Length = 536
Score = 68.9 bits (167), Expect(2) = 1e-11
Identities = 35/57 (61%), Positives = 40/57 (70%)
Frame = -1
Query: 280 FVRMGAARNAVTSRTMIRGYVHSHEFARAIDLFEKMQAECVRPTEVTMASLLSACGH 110
FV M +N VT TMI GYV EF RAI+LF++M E V+PTEVTM SLLSAC H
Sbjct: 123 FVEMEFMKNVVTWNTMIAGYVQCGEFVRAINLFQRMLREEVKPTEVTMVSLLSACAH 179
Score = 27.3 bits (59), Expect(2) = 1e-11
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3
Query: 83 IHTXXXXXXXXIDVVLGNTHIDMYWKC 3
IH ID +LGN IDMY+KC
Sbjct: 189 IHGYIRTKKIMIDFILGNALIDMYFKC 215
>emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 62.4 bits (150), Expect(2) = 4e-10
Identities = 30/49 (61%), Positives = 36/49 (73%)
Frame = -1
Query: 256 NAVTSRTMIRGYVHSHEFARAIDLFEKMQAECVRPTEVTMASLLSACGH 110
N+VT TMI YV EF AI +F++MQ+E V+PTEVTM SLLSAC H
Sbjct: 97 NSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAH 145
Score = 28.5 bits (62), Expect(2) = 4e-10
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -3
Query: 83 IHTXXXXXXXXIDVVLGNTHIDMYWKC 3
IH IDVVLGN IDMY KC
Sbjct: 155 IHGYIRTKRLKIDVVLGNALIDMYCKC 181
>gb|KCW55705.1| hypothetical protein EUGRSUZ_I01550 [Eucalyptus grandis]
Length = 590
Score = 61.6 bits (148), Expect(2) = 2e-09
Identities = 30/49 (61%), Positives = 36/49 (73%)
Frame = -1
Query: 256 NAVTSRTMIRGYVHSHEFARAIDLFEKMQAECVRPTEVTMASLLSACGH 110
N+VT TMI GYV EF +AI F++M+ E V+PTEVTM SLLSAC H
Sbjct: 182 NSVTWNTMISGYVQCKEFGKAIATFQEMRLENVKPTEVTMISLLSACAH 230
Score = 26.9 bits (58), Expect(2) = 2e-09
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -3
Query: 83 IHTXXXXXXXXIDVVLGNTHIDMYWKC 3
IH ID VLGN IDMY KC
Sbjct: 240 IHDYIRRKRLKIDAVLGNALIDMYSKC 266
>ref|XP_011628652.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Amborella trichopoda]
Length = 571
Score = 61.6 bits (148), Expect(2) = 2e-09
Identities = 29/51 (56%), Positives = 36/51 (70%)
Frame = -1
Query: 262 ARNAVTSRTMIRGYVHSHEFARAIDLFEKMQAECVRPTEVTMASLLSACGH 110
+RN++T TMI GYVH+ +F A LF +MQ E VR EVT+ SLLSAC H
Sbjct: 161 SRNSITWNTMISGYVHTGDFTDAFSLFHQMQVERVRVNEVTLVSLLSACAH 211
Score = 26.6 bits (57), Expect(2) = 2e-09
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 83 IHTXXXXXXXXIDVVLGNTHIDMYWKC 3
IH DVVLG +DMY KC
Sbjct: 221 IHAYMRHKRFKFDVVLGTALVDMYLKC 247
>ref|XP_012489426.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Gossypium raimondii]
gi|763773462|gb|KJB40585.1| hypothetical protein
B456_007G070100 [Gossypium raimondii]
Length = 535
Score = 59.3 bits (142), Expect(2) = 7e-07
Identities = 28/50 (56%), Positives = 37/50 (74%)
Frame = -1
Query: 265 AARNAVTSRTMIRGYVHSHEFARAIDLFEKMQAECVRPTEVTMASLLSAC 116
A RN V+ +MI GYV + +F A+DLF++MQ E VRP+E TM SLL+AC
Sbjct: 216 ATRNTVSWNSMISGYVRNGKFLEALDLFQEMQGENVRPSEFTMVSLLNAC 265
Score = 20.4 bits (41), Expect(2) = 7e-07
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = -3
Query: 83 IHTXXXXXXXXIDVVLGNTHIDMYWKC 3
+H ++V+L IDMY KC
Sbjct: 277 VHDYVLSQNFELNVILVTAIIDMYCKC 303
>ref|XP_010045597.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Eucalyptus grandis]
Length = 593
Score = 59.3 bits (142), Expect = 1e-06
Identities = 30/57 (52%), Positives = 38/57 (66%)
Frame = -1
Query: 280 FVRMGAARNAVTSRTMIRGYVHSHEFARAIDLFEKMQAECVRPTEVTMASLLSACGH 110
F MG RN+V+ +I GY H+ +FA A+DLF +MQA+ V TEVTM LSAC H
Sbjct: 186 FDEMGE-RNSVSWNALITGYTHNRKFAEALDLFREMQADGVELTEVTMVGALSACAH 241
>gb|KCW83681.1| hypothetical protein EUGRSUZ_B00560 [Eucalyptus grandis]
Length = 598
Score = 59.3 bits (142), Expect = 1e-06
Identities = 30/57 (52%), Positives = 38/57 (66%)
Frame = -1
Query: 280 FVRMGAARNAVTSRTMIRGYVHSHEFARAIDLFEKMQAECVRPTEVTMASLLSACGH 110
F MG RN+V+ +I GY H+ +FA A+DLF +MQA+ V TEVTM LSAC H
Sbjct: 186 FDEMGE-RNSVSWNALITGYTHNRKFAEALDLFREMQADGVELTEVTMVGALSACAH 241
>ref|XP_009381414.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial [Musa acuminata subsp. malaccensis]
Length = 687
Score = 58.9 bits (141), Expect = 1e-06
Identities = 26/57 (45%), Positives = 37/57 (64%)
Frame = -1
Query: 280 FVRMGAARNAVTSRTMIRGYVHSHEFARAIDLFEKMQAECVRPTEVTMASLLSACGH 110
F MG+ RN VT MI GY + A++LFE+M+ C+RPT +T ++L+ACGH
Sbjct: 462 FDGMGSQRNVVTWNAMIGGYAQHGQARGALELFEEMKRRCIRPTYITFIAILNACGH 518
>ref|XP_008234306.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Prunus mume]
Length = 614
Score = 51.6 bits (122), Expect(2) = 2e-06
Identities = 24/50 (48%), Positives = 34/50 (68%)
Frame = -1
Query: 259 RNAVTSRTMIRGYVHSHEFARAIDLFEKMQAECVRPTEVTMASLLSACGH 110
RN V+ +MI GY +++ A A+ LFE+M VR E+T+AS+LSAC H
Sbjct: 313 RNVVSWTSMITGYSQANQHAEAVSLFEEMMGANVRADEITVASVLSACAH 362
Score = 26.9 bits (58), Expect(2) = 2e-06
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -3
Query: 107 GSFIIVD*IHTXXXXXXXXIDVVLGNTHIDMYWKC 3
GS + + +H D+ +GN IDMY KC
Sbjct: 364 GSLDVGEAVHRYIRKHGVKADIYVGNALIDMYCKC 398
>ref|XP_010106807.1| hypothetical protein L484_005353 [Morus notabilis]
gi|587924599|gb|EXC11892.1| hypothetical protein
L484_005353 [Morus notabilis]
Length = 617
Score = 49.3 bits (116), Expect(2) = 2e-06
Identities = 22/50 (44%), Positives = 35/50 (70%)
Frame = -1
Query: 259 RNAVTSRTMIRGYVHSHEFARAIDLFEKMQAECVRPTEVTMASLLSACGH 110
R+ V+ MI GY +++ + A+ LF++M A V+P E+T+AS+LSAC H
Sbjct: 314 RDVVSWTAMITGYSQANQHSDAVKLFQEMMAAKVKPDEITVASVLSACAH 363
Score = 28.9 bits (63), Expect(2) = 2e-06
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 107 GSFIIVD*IHTXXXXXXXXIDVVLGNTHIDMYWKC 3
GS + + +H D+ +GNT IDMY KC
Sbjct: 365 GSLDVGEAVHDFIINHGVKADICVGNTLIDMYCKC 399
>emb|CDP00315.1| unnamed protein product [Coffea canephora]
Length = 636
Score = 53.1 bits (126), Expect(2) = 3e-06
Identities = 24/50 (48%), Positives = 36/50 (72%)
Frame = -1
Query: 259 RNAVTSRTMIRGYVHSHEFARAIDLFEKMQAECVRPTEVTMASLLSACGH 110
R+ +T ++I GY H+ +F+ AI +F +M A V+P EVT+AS+LSAC H
Sbjct: 312 RDVITWTSIIVGYCHAKQFSDAIRIFRRMMAAKVKPDEVTVASVLSACAH 361
Score = 24.3 bits (51), Expect(2) = 3e-06
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 83 IHTXXXXXXXXIDVVLGNTHIDMYWKC 3
+H +D+ +GN IDMY KC
Sbjct: 371 VHKYVCEYDVKVDIHVGNALIDMYCKC 397
>ref|XP_010061651.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Eucalyptus grandis]
Length = 631
Score = 51.6 bits (122), Expect(2) = 3e-06
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = -1
Query: 259 RNAVTSRTMIRGYVHSHEFARAIDLFEKMQAECVRPTEVTMASLLSACGH 110
R+ ++ +MI GY + FA A+ LF++M V+P EVT+AS+LSAC H
Sbjct: 320 RDVISWTSMITGYAQASNFAMAVKLFQEMMVANVKPDEVTVASVLSACAH 369
Score = 25.8 bits (55), Expect(2) = 3e-06
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -3
Query: 107 GSFIIVD*IHTXXXXXXXXIDVVLGNTHIDMYWKC 3
GS I +H ID +GN+ IDMY KC
Sbjct: 371 GSLDIGKAVHNYIIEHGVKIDTYVGNSLIDMYCKC 405
>gb|KCW90768.1| hypothetical protein EUGRSUZ_A02839 [Eucalyptus grandis]
Length = 517
Score = 51.6 bits (122), Expect(2) = 3e-06
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = -1
Query: 259 RNAVTSRTMIRGYVHSHEFARAIDLFEKMQAECVRPTEVTMASLLSACGH 110
R+ ++ +MI GY + FA A+ LF++M V+P EVT+AS+LSAC H
Sbjct: 206 RDVISWTSMITGYAQASNFAMAVKLFQEMMVANVKPDEVTVASVLSACAH 255
Score = 25.8 bits (55), Expect(2) = 3e-06
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -3
Query: 107 GSFIIVD*IHTXXXXXXXXIDVVLGNTHIDMYWKC 3
GS I +H ID +GN+ IDMY KC
Sbjct: 257 GSLDIGKAVHNYIIEHGVKIDTYVGNSLIDMYCKC 291
>ref|XP_011623546.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Amborella trichopoda]
Length = 617
Score = 55.8 bits (133), Expect(2) = 4e-06
Identities = 27/50 (54%), Positives = 32/50 (64%)
Frame = -1
Query: 259 RNAVTSRTMIRGYVHSHEFARAIDLFEKMQAECVRPTEVTMASLLSACGH 110
RN V+ MI YVH+ FA A+ LF +MQ V+P EVTM S L ACGH
Sbjct: 208 RNVVSWNVMITCYVHNRRFAGALQLFREMQFSDVKPNEVTMVSALPACGH 257
Score = 21.2 bits (43), Expect(2) = 4e-06
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = -3
Query: 83 IHTXXXXXXXXIDVVLGNTHIDMYWKC 3
IH +DV + IDMY KC
Sbjct: 267 IHMYIDKNRIKMDVYVSTALIDMYGKC 293