BLASTX nr result
ID: Gardenia21_contig00049571
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Gardenia21_contig00049571
(235 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDP02835.1| unnamed protein product [Coffea canephora] 139 8e-31
ref|XP_009777622.1| PREDICTED: pentatricopeptide repeat-containi... 102 9e-20
ref|XP_006343621.1| PREDICTED: pentatricopeptide repeat-containi... 102 1e-19
ref|XP_004242990.1| PREDICTED: pentatricopeptide repeat-containi... 102 1e-19
ref|XP_009622820.1| PREDICTED: pentatricopeptide repeat-containi... 101 3e-19
emb|CBI36552.3| unnamed protein product [Vitis vinifera] 92 1e-16
ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containi... 92 1e-16
ref|XP_010273676.1| PREDICTED: pentatricopeptide repeat-containi... 85 2e-14
ref|XP_010273675.1| PREDICTED: pentatricopeptide repeat-containi... 85 2e-14
ref|XP_012442301.1| PREDICTED: pentatricopeptide repeat-containi... 82 1e-13
ref|XP_007013861.1| Pentatricopeptide repeat (PPR) superfamily p... 82 1e-13
ref|XP_008243021.1| PREDICTED: pentatricopeptide repeat-containi... 82 2e-13
gb|KDO62295.1| hypothetical protein CISIN_1g044131mg [Citrus sin... 81 3e-13
ref|XP_006474049.1| PREDICTED: pentatricopeptide repeat-containi... 81 3e-13
ref|XP_006453556.1| hypothetical protein CICLE_v10007511mg [Citr... 81 3e-13
ref|XP_010091160.1| hypothetical protein L484_013952 [Morus nota... 80 5e-13
ref|XP_008362867.1| PREDICTED: pentatricopeptide repeat-containi... 80 5e-13
ref|XP_004288724.2| PREDICTED: pentatricopeptide repeat-containi... 80 6e-13
ref|XP_009358417.1| PREDICTED: pentatricopeptide repeat-containi... 80 6e-13
ref|XP_008394295.1| PREDICTED: pentatricopeptide repeat-containi... 80 6e-13
>emb|CDP02835.1| unnamed protein product [Coffea canephora]
Length = 793
Score = 139 bits (350), Expect = 8e-31
Identities = 70/78 (89%), Positives = 72/78 (92%)
Frame = -1
Query: 235 SLLKSATNLFQLNQTHAQVILNGLSKDLVTITKLTHKLFDFKSISQAKLLFTSLSNQIPP 56
SLLKS TNL QLNQTHAQVILNGLSKDL+ ITKLTHKLFD K+ISQAKLLFTSLSNQIPP
Sbjct: 21 SLLKSTTNLSQLNQTHAQVILNGLSKDLIAITKLTHKLFDVKAISQAKLLFTSLSNQIPP 80
Query: 55 DKFFYNVLIRGFSQNKCP 2
DKF YNVLIRGFSQNK P
Sbjct: 81 DKFLYNVLIRGFSQNKSP 98
>ref|XP_009777622.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Nicotiana sylvestris] gi|698581723|ref|XP_009777623.1|
PREDICTED: pentatricopeptide repeat-containing protein
At4g30700 [Nicotiana sylvestris]
Length = 791
Score = 102 bits (255), Expect = 9e-20
Identities = 50/78 (64%), Positives = 60/78 (76%)
Frame = -1
Query: 235 SLLKSATNLFQLNQTHAQVILNGLSKDLVTITKLTHKLFDFKSISQAKLLFTSLSNQIPP 56
SL+ AT L QLNQTHA +I + LS DL+TITKLTHK FDFK+IS+AK LFT+ + PP
Sbjct: 19 SLINQATTLSQLNQTHAHLIRHSLSTDLITITKLTHKFFDFKAISKAKNLFTTFNKTNPP 78
Query: 55 DKFFYNVLIRGFSQNKCP 2
D F YNVLIRG+S+N P
Sbjct: 79 DLFLYNVLIRGYSKNNLP 96
>ref|XP_006343621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like isoform X1 [Solanum tuberosum]
gi|565353404|ref|XP_006343622.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g30700-like isoform X2 [Solanum tuberosum]
Length = 791
Score = 102 bits (253), Expect = 1e-19
Identities = 51/75 (68%), Positives = 58/75 (77%)
Frame = -1
Query: 235 SLLKSATNLFQLNQTHAQVILNGLSKDLVTITKLTHKLFDFKSISQAKLLFTSLSNQIPP 56
SL+ AT L QLNQ HA +I NGLS DL+TITKLTHK DFKSIS+AK LFT+ +N PP
Sbjct: 19 SLINQATTLSQLNQIHANLIRNGLSNDLITITKLTHKFSDFKSISKAKNLFTTFNNTNPP 78
Query: 55 DKFFYNVLIRGFSQN 11
D F YNVLIRG S+N
Sbjct: 79 DLFLYNVLIRGLSRN 93
>ref|XP_004242990.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Solanum lycopersicum]
Length = 791
Score = 102 bits (253), Expect = 1e-19
Identities = 51/75 (68%), Positives = 58/75 (77%)
Frame = -1
Query: 235 SLLKSATNLFQLNQTHAQVILNGLSKDLVTITKLTHKLFDFKSISQAKLLFTSLSNQIPP 56
SL+ AT L QLNQ HA +I NGLS DL+TITKLTHK DFKSIS+AK LFT+ +N PP
Sbjct: 19 SLINQATTLSQLNQLHANLIRNGLSNDLITITKLTHKFSDFKSISKAKNLFTTFNNTNPP 78
Query: 55 DKFFYNVLIRGFSQN 11
D F YNVLIRG S+N
Sbjct: 79 DLFLYNVLIRGLSRN 93
>ref|XP_009622820.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Nicotiana tomentosiformis]
Length = 791
Score = 101 bits (251), Expect = 3e-19
Identities = 49/78 (62%), Positives = 60/78 (76%)
Frame = -1
Query: 235 SLLKSATNLFQLNQTHAQVILNGLSKDLVTITKLTHKLFDFKSISQAKLLFTSLSNQIPP 56
SL+ AT L LNQTHA +I + LS DL+TITKLTHKLFDFK+IS+AK +FT+ + PP
Sbjct: 19 SLINQATTLSHLNQTHAHLIRHSLSTDLITITKLTHKLFDFKAISKAKNVFTTFNKTNPP 78
Query: 55 DKFFYNVLIRGFSQNKCP 2
D F YNVLIRG+S+N P
Sbjct: 79 DLFLYNVLIRGYSKNNLP 96
>emb|CBI36552.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 92.4 bits (228), Expect = 1e-16
Identities = 47/78 (60%), Positives = 56/78 (71%)
Frame = -1
Query: 235 SLLKSATNLFQLNQTHAQVILNGLSKDLVTITKLTHKLFDFKSISQAKLLFTSLSNQIPP 56
+L+ + L QLNQTHAQ+ILNGL DLVT+TKLTHKL K+I QA LLF+++ N P
Sbjct: 15 TLINRVSTLHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPN---P 71
Query: 55 DKFFYNVLIRGFSQNKCP 2
D F YNVLIR FS N P
Sbjct: 72 DLFLYNVLIRAFSLNNSP 89
>ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 92.4 bits (228), Expect = 1e-16
Identities = 47/78 (60%), Positives = 56/78 (71%)
Frame = -1
Query: 235 SLLKSATNLFQLNQTHAQVILNGLSKDLVTITKLTHKLFDFKSISQAKLLFTSLSNQIPP 56
+L+ + L QLNQTHAQ+ILNGL DLVT+TKLTHKL K+I QA LLF+++ N P
Sbjct: 15 TLINRVSTLHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPN---P 71
Query: 55 DKFFYNVLIRGFSQNKCP 2
D F YNVLIR FS N P
Sbjct: 72 DLFLYNVLIRAFSLNNSP 89
>ref|XP_010273676.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
isoform X2 [Nelumbo nucifera]
Length = 786
Score = 85.1 bits (209), Expect = 2e-14
Identities = 44/75 (58%), Positives = 55/75 (73%)
Frame = -1
Query: 235 SLLKSATNLFQLNQTHAQVILNGLSKDLVTITKLTHKLFDFKSISQAKLLFTSLSNQIPP 56
+L+ A+ + Q NQ HAQVILNGL DL+T+TKLT KL DF +I QA LLF+++S P
Sbjct: 19 NLIGKASTINQFNQIHAQVILNGLHNDLITVTKLTQKLADFGAIDQAHLLFSTISE---P 75
Query: 55 DKFFYNVLIRGFSQN 11
D F +NVLIRGFS N
Sbjct: 76 DLFLFNVLIRGFSLN 90
>ref|XP_010273675.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
isoform X1 [Nelumbo nucifera]
Length = 788
Score = 85.1 bits (209), Expect = 2e-14
Identities = 44/75 (58%), Positives = 55/75 (73%)
Frame = -1
Query: 235 SLLKSATNLFQLNQTHAQVILNGLSKDLVTITKLTHKLFDFKSISQAKLLFTSLSNQIPP 56
+L+ A+ + Q NQ HAQVILNGL DL+T+TKLT KL DF +I QA LLF+++S P
Sbjct: 19 NLIGKASTINQFNQIHAQVILNGLHNDLITVTKLTQKLADFGAIDQAHLLFSTISE---P 75
Query: 55 DKFFYNVLIRGFSQN 11
D F +NVLIRGFS N
Sbjct: 76 DLFLFNVLIRGFSLN 90
>ref|XP_012442301.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Gossypium raimondii] gi|763786887|gb|KJB53883.1|
hypothetical protein B456_009G009600 [Gossypium
raimondii]
Length = 788
Score = 82.4 bits (202), Expect = 1e-13
Identities = 42/73 (57%), Positives = 52/73 (71%)
Frame = -1
Query: 235 SLLKSATNLFQLNQTHAQVILNGLSKDLVTITKLTHKLFDFKSISQAKLLFTSLSNQIPP 56
+LLK +T L L QTHAQ+ILN D+ TITKLTH+LFD K+ S A+ LF S+ N P
Sbjct: 22 NLLKKSTTLSHLTQTHAQIILNDFQNDISTITKLTHRLFDLKATSYARHLFLSIPN---P 78
Query: 55 DKFFYNVLIRGFS 17
D F +NVLI+GFS
Sbjct: 79 DLFLFNVLIKGFS 91
>ref|XP_007013861.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao] gi|508784224|gb|EOY31480.1| Pentatricopeptide
repeat (PPR) superfamily protein [Theobroma cacao]
Length = 801
Score = 82.4 bits (202), Expect = 1e-13
Identities = 43/73 (58%), Positives = 53/73 (72%)
Frame = -1
Query: 235 SLLKSATNLFQLNQTHAQVILNGLSKDLVTITKLTHKLFDFKSISQAKLLFTSLSNQIPP 56
+LLK +T L QL QTHAQ+ILNG DL TITKLTH+LFD + S A+ +F S+ N P
Sbjct: 35 NLLKKSTTLPQLTQTHAQLILNGFRNDLSTITKLTHRLFDLNATSYARDVFLSIPN---P 91
Query: 55 DKFFYNVLIRGFS 17
D F +NVLI+GFS
Sbjct: 92 DLFLFNVLIKGFS 104
>ref|XP_008243021.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Prunus mume]
Length = 788
Score = 81.6 bits (200), Expect = 2e-13
Identities = 42/78 (53%), Positives = 51/78 (65%)
Frame = -1
Query: 235 SLLKSATNLFQLNQTHAQVILNGLSKDLVTITKLTHKLFDFKSISQAKLLFTSLSNQIPP 56
SLL AT+L L QTHAQ+ILNG DL +TKLTHK D K+I ++ LF S+ P
Sbjct: 20 SLLSKATSLSHLTQTHAQIILNGYQDDLAAVTKLTHKFSDLKAIRHSRDLFLSIPK---P 76
Query: 55 DKFFYNVLIRGFSQNKCP 2
D F +NVLIRGF+ N P
Sbjct: 77 DLFLFNVLIRGFASNASP 94
>gb|KDO62295.1| hypothetical protein CISIN_1g044131mg [Citrus sinensis]
Length = 784
Score = 81.3 bits (199), Expect = 3e-13
Identities = 41/78 (52%), Positives = 52/78 (66%)
Frame = -1
Query: 235 SLLKSATNLFQLNQTHAQVILNGLSKDLVTITKLTHKLFDFKSISQAKLLFTSLSNQIPP 56
SLLK A QL QTHAQ+I++G DL T+TKL H+L DFK+ A+ LF S+ P
Sbjct: 14 SLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPK---P 70
Query: 55 DKFFYNVLIRGFSQNKCP 2
D F +NV+IRGFS N+ P
Sbjct: 71 DLFLFNVIIRGFSNNEMP 88
>ref|XP_006474049.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Citrus sinensis]
Length = 784
Score = 81.3 bits (199), Expect = 3e-13
Identities = 41/78 (52%), Positives = 52/78 (66%)
Frame = -1
Query: 235 SLLKSATNLFQLNQTHAQVILNGLSKDLVTITKLTHKLFDFKSISQAKLLFTSLSNQIPP 56
SLLK A QL QTHAQ+I++G DL T+TKL H+L DFK+ A+ LF S+ P
Sbjct: 14 SLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPK---P 70
Query: 55 DKFFYNVLIRGFSQNKCP 2
D F +NV+IRGFS N+ P
Sbjct: 71 DLFLFNVIIRGFSNNEMP 88
>ref|XP_006453556.1| hypothetical protein CICLE_v10007511mg [Citrus clementina]
gi|557556782|gb|ESR66796.1| hypothetical protein
CICLE_v10007511mg [Citrus clementina]
Length = 784
Score = 81.3 bits (199), Expect = 3e-13
Identities = 41/78 (52%), Positives = 52/78 (66%)
Frame = -1
Query: 235 SLLKSATNLFQLNQTHAQVILNGLSKDLVTITKLTHKLFDFKSISQAKLLFTSLSNQIPP 56
SLLK A QL QTHAQ+I++G DL T+TKL H+L DFK+ A+ LF S+ P
Sbjct: 14 SLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPK---P 70
Query: 55 DKFFYNVLIRGFSQNKCP 2
D F +NV+IRGFS N+ P
Sbjct: 71 DLFLFNVIIRGFSNNEMP 88
>ref|XP_010091160.1| hypothetical protein L484_013952 [Morus notabilis]
gi|587852815|gb|EXB42930.1| hypothetical protein
L484_013952 [Morus notabilis]
Length = 781
Score = 80.5 bits (197), Expect = 5e-13
Identities = 42/77 (54%), Positives = 55/77 (71%)
Frame = -1
Query: 232 LLKSATNLFQLNQTHAQVILNGLSKDLVTITKLTHKLFDFKSISQAKLLFTSLSNQIPPD 53
+LK+A L +L+QTHAQ I++GL DL +TKLTHKL D K+I QA LF ++ N PD
Sbjct: 14 ILKTAGTLPELSQTHAQAIVHGLQNDLAFLTKLTHKLSDLKAIRQACDLFLTVPN---PD 70
Query: 52 KFFYNVLIRGFSQNKCP 2
F +NVL++GFS NK P
Sbjct: 71 LFLFNVLLKGFSTNKSP 87
>ref|XP_008362867.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Malus domestica]
Length = 789
Score = 80.5 bits (197), Expect = 5e-13
Identities = 41/77 (53%), Positives = 51/77 (66%)
Frame = -1
Query: 232 LLKSATNLFQLNQTHAQVILNGLSKDLVTITKLTHKLFDFKSISQAKLLFTSLSNQIPPD 53
LL AT L L QTHAQ+ILNG DL T+TKLTHK D K++ A+ LF S++ PD
Sbjct: 22 LLNKATCLSHLTQTHAQIILNGYQNDLATVTKLTHKFSDLKAMRHARDLFLSIAR---PD 78
Query: 52 KFFYNVLIRGFSQNKCP 2
F +NV+IRGF+ N P
Sbjct: 79 LFLFNVVIRGFAANAAP 95
>ref|XP_004288724.2| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Fragaria vesca subsp. vesca]
Length = 806
Score = 80.1 bits (196), Expect = 6e-13
Identities = 43/78 (55%), Positives = 50/78 (64%)
Frame = -1
Query: 235 SLLKSATNLFQLNQTHAQVILNGLSKDLVTITKLTHKLFDFKSISQAKLLFTSLSNQIPP 56
S+LK AT L L QTHAQ+ILNG DLV ITKLTHK D K+I A+ L S P
Sbjct: 38 SILKKATTLSHLTQTHAQIILNGYQNDLVIITKLTHKFSDLKAIRHARDLVFSFPK---P 94
Query: 55 DKFFYNVLIRGFSQNKCP 2
D F +NVLI+GF+ N P
Sbjct: 95 DLFLFNVLIKGFAANASP 112
>ref|XP_009358417.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Pyrus x bretschneideri]
Length = 789
Score = 80.1 bits (196), Expect = 6e-13
Identities = 41/77 (53%), Positives = 50/77 (64%)
Frame = -1
Query: 232 LLKSATNLFQLNQTHAQVILNGLSKDLVTITKLTHKLFDFKSISQAKLLFTSLSNQIPPD 53
LL T L QL QTHAQ+ILNG DL T+TKLTHK D K++ A+ LF S+ PD
Sbjct: 22 LLNKVTCLSQLTQTHAQIILNGYQNDLATVTKLTHKFSDLKAMRNARDLFLSIPR---PD 78
Query: 52 KFFYNVLIRGFSQNKCP 2
F +NV+IRGF+ N P
Sbjct: 79 LFLFNVVIRGFAANAAP 95
>ref|XP_008394295.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Malus domestica]
Length = 789
Score = 80.1 bits (196), Expect = 6e-13
Identities = 41/77 (53%), Positives = 51/77 (66%)
Frame = -1
Query: 232 LLKSATNLFQLNQTHAQVILNGLSKDLVTITKLTHKLFDFKSISQAKLLFTSLSNQIPPD 53
LL +AT L L QTHAQ+ILNG DL T+TKLTHK D K++ A+ LF S+ PD
Sbjct: 22 LLNNATCLSHLTQTHAQIILNGYQNDLATVTKLTHKFSDLKAMRNARDLFLSIPR---PD 78
Query: 52 KFFYNVLIRGFSQNKCP 2
F +NV+IRGF+ N P
Sbjct: 79 LFLFNVVIRGFAANAAP 95