BLASTX nr result

ID: Gardenia21_contig00048769 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00048769
         (475 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP00400.1| unnamed protein product [Coffea canephora]             53   2e-08

>emb|CDP00400.1| unnamed protein product [Coffea canephora]
          Length = 76

 Score = 53.1 bits (126), Expect(2) = 2e-08
 Identities = 27/41 (65%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
 Frame = +3

Query: 213 MQQPMSTCVLRFHPFGDMPLLV---KNDRSEDPGLDDEGTR 326
           +Q PMST VLRFHPF DMPLL+   K +RSED  LDDEG +
Sbjct: 7   LQHPMSTGVLRFHPFRDMPLLLVKRKKERSEDLRLDDEGEK 47



 Score = 32.3 bits (72), Expect(2) = 2e-08
 Identities = 17/24 (70%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
 Frame = +1

Query: 337 SSKTVHALIPF-YSVFMLAMLSSY 405
           SS+ VHA IP  YSVF+L MLSSY
Sbjct: 53  SSRKVHAWIPLLYSVFILVMLSSY 76


Top