BLASTX nr result

ID: Gardenia21_contig00046702 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00046702
         (466 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011090804.1| PREDICTED: glycine-rich RNA-binding protein ...    50   4e-11
ref|XP_009799682.1| PREDICTED: nuclear cap-binding protein subun...    49   5e-10
ref|XP_012828250.1| PREDICTED: RNA-binding motif protein, Y chro...    49   7e-10
ref|XP_009617118.1| PREDICTED: RNA-binding motif protein, Y chro...    48   1e-09
ref|XP_006584061.1| PREDICTED: multiple RNA-binding domain-conta...    53   3e-08
ref|XP_012069914.1| PREDICTED: retrovirus-related Pol polyprotei...    49   9e-08
ref|XP_014508679.1| PREDICTED: multiple RNA-binding domain-conta...    52   1e-07
gb|ERN12363.1| hypothetical protein AMTR_s00025p00095750 [Ambore...    44   8e-07
ref|XP_007154133.1| hypothetical protein PHAVU_003G093200g [Phas...    50   1e-06
ref|XP_003550050.1| PREDICTED: multiple RNA-binding domain-conta...    48   3e-06

>ref|XP_011090804.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial
           [Sesamum indicum]
          Length = 172

 Score = 50.4 bits (119), Expect(2) = 4e-11
 Identities = 25/42 (59%), Positives = 30/42 (71%)
 Frame = -2

Query: 210 EEFA*RAVDEMNGKFFNGRFISVTIARPESFKTRDKTEHYKF 85
           EE A  AV+E+NGKFF GRF+ V+IA+P S K R K   YKF
Sbjct: 131 EEHARAAVEEVNGKFFEGRFLYVSIAKPGSCKPRPKPTPYKF 172



 Score = 43.9 bits (102), Expect(2) = 4e-11
 Identities = 20/27 (74%), Positives = 25/27 (92%)
 Frame = -3

Query: 287 VEGLAKSTSQGSLKSAFSQFGDVGRVK 207
           V+GLA+STS+G LK+AFSQFG+V RVK
Sbjct: 84  VKGLAQSTSEGGLKAAFSQFGEVSRVK 110


>ref|XP_009799682.1| PREDICTED: nuclear cap-binding protein subunit 2 isoform X1
           [Nicotiana sylvestris]
          Length = 169

 Score = 48.9 bits (115), Expect(2) = 5e-10
 Identities = 24/42 (57%), Positives = 29/42 (69%)
 Frame = -2

Query: 210 EEFA*RAVDEMNGKFFNGRFISVTIARPESFKTRDKTEHYKF 85
           +E A  AV EMNGKF +GRF+ V IA+PES K   +T  YKF
Sbjct: 128 KESAQSAVQEMNGKFLDGRFVQVQIAKPESCKPNVRTATYKF 169



 Score = 41.6 bits (96), Expect(2) = 5e-10
 Identities = 19/27 (70%), Positives = 23/27 (85%)
 Frame = -3

Query: 287 VEGLAKSTSQGSLKSAFSQFGDVGRVK 207
           ++GLAKST++G LK  FSQFGDV RVK
Sbjct: 81  LKGLAKSTAEGRLKVVFSQFGDVSRVK 107


>ref|XP_012828250.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
           B [Erythranthe guttatus] gi|604345256|gb|EYU43838.1|
           hypothetical protein MIMGU_mgv1a014975mg [Erythranthe
           guttata]
          Length = 172

 Score = 48.9 bits (115), Expect(2) = 7e-10
 Identities = 24/42 (57%), Positives = 27/42 (64%)
 Frame = -2

Query: 210 EEFA*RAVDEMNGKFFNGRFISVTIARPESFKTRDKTEHYKF 85
           E+ A  AVDEMNG FF GRFI V  A+P S K R +   YKF
Sbjct: 131 EDHAQAAVDEMNGHFFEGRFIRVAFAKPGSCKARSEPSPYKF 172



 Score = 41.2 bits (95), Expect(2) = 7e-10
 Identities = 18/27 (66%), Positives = 24/27 (88%)
 Frame = -3

Query: 287 VEGLAKSTSQGSLKSAFSQFGDVGRVK 207
           ++GLA+STS+G LKS FS+FG+V RVK
Sbjct: 84  IKGLAQSTSEGGLKSEFSRFGEVSRVK 110


>ref|XP_009617118.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
           B isoform X2 [Nicotiana tomentosiformis]
          Length = 167

 Score = 47.8 bits (112), Expect(2) = 1e-09
 Identities = 25/42 (59%), Positives = 28/42 (66%)
 Frame = -2

Query: 210 EEFA*RAVDEMNGKFFNGRFISVTIARPESFKTRDKTEHYKF 85
           +E A  AV EMNGKF +GRFI V IA+P S K   KT  YKF
Sbjct: 126 KESAQSAVQEMNGKFLDGRFIQVQIAKPGSCKPNVKTAPYKF 167



 Score = 41.6 bits (96), Expect(2) = 1e-09
 Identities = 19/27 (70%), Positives = 23/27 (85%)
 Frame = -3

Query: 287 VEGLAKSTSQGSLKSAFSQFGDVGRVK 207
           ++GLAKST++G LK  FSQFGDV RVK
Sbjct: 79  LKGLAKSTAEGRLKVVFSQFGDVSRVK 105


>ref|XP_006584061.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
           [Glycine max] gi|947102524|gb|KRH51016.1| hypothetical
           protein GLYMA_07G256600 [Glycine max]
          Length = 157

 Score = 52.8 bits (125), Expect(2) = 3e-08
 Identities = 27/42 (64%), Positives = 31/42 (73%)
 Frame = -2

Query: 210 EEFA*RAVDEMNGKFFNGRFISVTIARPESFKTRDKTEHYKF 85
           EE A  AV EMNGKFF+GRFI VTIA+P S K+  +T  YKF
Sbjct: 116 EESAQLAVQEMNGKFFDGRFIYVTIAKPGSSKSSKRTTAYKF 157



 Score = 31.6 bits (70), Expect(2) = 3e-08
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = -3

Query: 287 VEGLAKSTSQGSLKSAFSQFGDVGRVK 207
           V+GL  STS+G L   FS+FGDV  V+
Sbjct: 69  VKGLPLSTSEGRLMKVFSEFGDVTLVQ 95


>ref|XP_012069914.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
           1-94 [Jatropha curcas]
          Length = 622

 Score = 48.9 bits (115), Expect(2) = 9e-08
 Identities = 25/43 (58%), Positives = 31/43 (72%)
 Frame = -2

Query: 213 SEEFA*RAVDEMNGKFFNGRFISVTIARPESFKTRDKTEHYKF 85
           SEE A  AV EM+GKFF+GRFI VTI++P S K+  +   YKF
Sbjct: 580 SEESAQVAVSEMDGKFFDGRFIFVTISKPGSCKSTQRITPYKF 622



 Score = 33.9 bits (76), Expect(2) = 9e-08
 Identities = 15/25 (60%), Positives = 19/25 (76%)
 Frame = -3

Query: 281 GLAKSTSQGSLKSAFSQFGDVGRVK 207
           GL  ST++G LK AFS +G+V RVK
Sbjct: 536 GLPLSTTEGRLKKAFSHYGEVSRVK 560


>ref|XP_014508679.1| PREDICTED: multiple RNA-binding domain-containing protein 1 [Vigna
           radiata var. radiata]
          Length = 161

 Score = 51.6 bits (122), Expect(2) = 1e-07
 Identities = 27/42 (64%), Positives = 29/42 (69%)
 Frame = -2

Query: 210 EEFA*RAVDEMNGKFFNGRFISVTIARPESFKTRDKTEHYKF 85
           EE A  AV EMNGKFF+GRFI VTIA+P S K    T  YKF
Sbjct: 120 EESAQLAVQEMNGKFFDGRFIYVTIAKPGSLKNLKTTTAYKF 161



 Score = 31.2 bits (69), Expect(2) = 1e-07
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = -3

Query: 287 VEGLAKSTSQGSLKSAFSQFGDVGRVK 207
           V+GL  STS+G L   FS+FG+V  V+
Sbjct: 73  VKGLPHSTSEGRLMKVFSEFGEVNLVQ 99


>gb|ERN12363.1| hypothetical protein AMTR_s00025p00095750 [Amborella trichopoda]
          Length = 121

 Score = 44.3 bits (103), Expect(2) = 8e-07
 Identities = 21/42 (50%), Positives = 29/42 (69%)
 Frame = -2

Query: 210 EEFA*RAVDEMNGKFFNGRFISVTIARPESFKTRDKTEHYKF 85
           EE A  AV +M+GKFF+GRF+ VT+A PE+   + K   Y+F
Sbjct: 80  EEDAKLAVKKMDGKFFDGRFVHVTMAWPETLSNKRKATPYRF 121



 Score = 35.4 bits (80), Expect(2) = 8e-07
 Identities = 16/27 (59%), Positives = 22/27 (81%)
 Frame = -3

Query: 287 VEGLAKSTSQGSLKSAFSQFGDVGRVK 207
           ++GL+ ST++G L +AFSQFG V RVK
Sbjct: 33  IKGLSLSTTEGYLTNAFSQFGKVDRVK 59


>ref|XP_007154133.1| hypothetical protein PHAVU_003G093200g [Phaseolus vulgaris]
           gi|561027487|gb|ESW26127.1| hypothetical protein
           PHAVU_003G093200g [Phaseolus vulgaris]
          Length = 161

 Score = 49.7 bits (117), Expect(2) = 1e-06
 Identities = 26/42 (61%), Positives = 29/42 (69%)
 Frame = -2

Query: 210 EEFA*RAVDEMNGKFFNGRFISVTIARPESFKTRDKTEHYKF 85
           EE A  A+ EMNGKFF+GRFI VTIA+P S K    T  YKF
Sbjct: 120 EESAQLAIQEMNGKFFDGRFIYVTIAKPGSSKKLKGTTAYKF 161



 Score = 29.3 bits (64), Expect(2) = 1e-06
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -3

Query: 287 VEGLAKSTSQGSLKSAFSQFGDVGRVK 207
           V+GL  S S+G L   FS+FG+V  V+
Sbjct: 73  VKGLPHSASEGRLMKVFSEFGEVNLVQ 99


>ref|XP_003550050.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
           isoform X1 [Glycine max] gi|947052674|gb|KRH02127.1|
           hypothetical protein GLYMA_17G017500 [Glycine max]
          Length = 160

 Score = 48.1 bits (113), Expect(2) = 3e-06
 Identities = 26/42 (61%), Positives = 29/42 (69%)
 Frame = -2

Query: 210 EEFA*RAVDEMNGKFFNGRFISVTIARPESFKTRDKTEHYKF 85
           EE A  AV EMNGKFF GRFI VTIA+P S K+  +   YKF
Sbjct: 119 EESAQLAVLEMNGKFFYGRFIYVTIAKPGSSKSSKRATAYKF 160



 Score = 29.6 bits (65), Expect(2) = 3e-06
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = -3

Query: 287 VEGLAKSTSQGSLKSAFSQFGDV 219
           V+GL  STS+G L   FS+FG+V
Sbjct: 72  VKGLPLSTSEGHLMKVFSEFGEV 94


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