BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00042904
         (243 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AIZ76619.1| replicase polyprotein [Elderberry carlavirus B]        141   2e-31
gb|AIZ76613.1| replicase polyprotein [Elderberry carlavirus A]        137   3e-30
gb|AIZ76631.1| replicase polyprotein [Elderberry carlavirus D]        134   2e-29
emb|CAH55773.1| replicase [Poplar mosaic virus (ATCC PV257)]          134   3e-29
ref|NP_958171.1| replicase [Poplar mosaic virus] gi|40737838|gb|...   134   3e-29
gb|AGG13282.1| Replicase [Garlic common latent virus]                 131   2e-28
ref|YP_004936159.1| unnamed protein product [Garlic common laten...   131   2e-28
ref|YP_002308447.1| RNA-dependent RNA polymerase [Hippeastrum la...   130   3e-28
ref|YP_002302557.1| RdRp polyprotein replicase [Potato latent vi...   130   4e-28
sp|P37987.1|RDRP_CVB RecName: Full=RNA replication protein; AltN...   128   2e-27
gb|AAB20076.2| RNA replicase homolog, partial [Chrysanthemum vir...   128   2e-27
emb|CAO78688.1| polyprotein [Chrysanthemum virus B]                   128   2e-27
emb|CAO78682.1| polyprotein [Chrysanthemum virus B]                   128   2e-27
emb|CAK54343.1| polyprotein, partial [Chrysanthemum virus B]          128   2e-27
emb|CAK54345.1| polyprotein, partial [Chrysanthemum virus B]          128   2e-27
emb|CAK54344.1| polyprotein, partial [Chrysanthemum virus B]          128   2e-27
emb|CAI48020.1| RNA replicase, partial [Chrysanthemum virus B]        128   2e-27
gb|ACM45991.1| replicase polyprotein, partial [Helleborus net ne...   127   3e-27
gb|ACM45985.1| replicase polyprotein [Helleborus net necrosis vi...   127   3e-27
ref|YP_001430021.1| replicase [Coleus vein necrosis virus] gi|15...   127   3e-27

>gb|AIZ76619.1| replicase polyprotein [Elderberry carlavirus B]
          Length = 1990

 Score =  141 bits (355), Expect = 2e-31
 Identities = 64/80 (80%), Positives = 72/80 (90%)
 Frame = -2

Query: 242  AKRLRHRSTYEDFLSNLKLKAKVDFTAKPTFCGWNLCPDGIYKKPQLIYERMCIAMETNN 63
            ++RLR  S YE FLS LKLKAKVDFTAKPTFCGWNL PDGI+KKPQL+YERMC+A ETNN
Sbjct: 1870 SRRLRVSSEYEAFLSKLKLKAKVDFTAKPTFCGWNLTPDGIFKKPQLVYERMCVAKETNN 1929

Query: 62   LASCLDNYALEVSYAYKLGE 3
            LA C+DNYA+EVS+AYKLGE
Sbjct: 1930 LAQCIDNYAIEVSFAYKLGE 1949


>gb|AIZ76613.1| replicase polyprotein [Elderberry carlavirus A]
          Length = 1995

 Score =  137 bits (345), Expect = 3e-30
 Identities = 60/80 (75%), Positives = 70/80 (87%)
 Frame = -2

Query: 242  AKRLRHRSTYEDFLSNLKLKAKVDFTAKPTFCGWNLCPDGIYKKPQLIYERMCIAMETNN 63
            ++RLR  + YEDFL  LKLKAKVDFT KPTFCGWNL PDGI+KKPQL+YERMC+A ETNN
Sbjct: 1875 SRRLRLSTEYEDFLGKLKLKAKVDFTRKPTFCGWNLTPDGIFKKPQLVYERMCVAKETNN 1934

Query: 62   LASCLDNYALEVSYAYKLGE 3
            L  C+DNYA+E+S+AYKLGE
Sbjct: 1935 LEQCIDNYAIEISFAYKLGE 1954


>gb|AIZ76631.1| replicase polyprotein [Elderberry carlavirus D]
          Length = 1980

 Score =  134 bits (338), Expect = 2e-29
 Identities = 61/80 (76%), Positives = 69/80 (86%)
 Frame = -2

Query: 242  AKRLRHRSTYEDFLSNLKLKAKVDFTAKPTFCGWNLCPDGIYKKPQLIYERMCIAMETNN 63
            +KRLR  + YEDFL  LKLKAKVDFT  PTFCGWNL P GI+KKPQL+YERMC+A ETNN
Sbjct: 1856 SKRLRVSNEYEDFLCKLKLKAKVDFTRTPTFCGWNLTPFGIFKKPQLVYERMCVARETNN 1915

Query: 62   LASCLDNYALEVSYAYKLGE 3
            LA C+DNYA+EVS+AYKLGE
Sbjct: 1916 LAQCIDNYAIEVSFAYKLGE 1935


>emb|CAH55773.1| replicase [Poplar mosaic virus (ATCC PV257)]
          Length = 1992

 Score =  134 bits (336), Expect = 3e-29
 Identities = 59/80 (73%), Positives = 70/80 (87%)
 Frame = -2

Query: 242  AKRLRHRSTYEDFLSNLKLKAKVDFTAKPTFCGWNLCPDGIYKKPQLIYERMCIAMETNN 63
            +K LR +S ++ FL  LKLKAKV FT KPTFCGWNLCPDGIYKKPQL+ ERMCIA ETNN
Sbjct: 1872 SKHLRVQSEHDKFLDKLKLKAKVQFTEKPTFCGWNLCPDGIYKKPQLVLERMCIARETNN 1931

Query: 62   LASCLDNYALEVSYAYKLGE 3
            LA+C+DNYA+EV++AYK+GE
Sbjct: 1932 LANCIDNYAIEVAFAYKMGE 1951


>ref|NP_958171.1| replicase [Poplar mosaic virus] gi|40737838|gb|AAR89414.1| replicase
            [Poplar mosaic virus]
          Length = 1992

 Score =  134 bits (336), Expect = 3e-29
 Identities = 59/80 (73%), Positives = 70/80 (87%)
 Frame = -2

Query: 242  AKRLRHRSTYEDFLSNLKLKAKVDFTAKPTFCGWNLCPDGIYKKPQLIYERMCIAMETNN 63
            +K LR +S ++ FL  LKLKAKV FT KPTFCGWNLCPDGIYKKPQL+ ERMCIA ETNN
Sbjct: 1872 SKHLRVQSEHDKFLDKLKLKAKVQFTEKPTFCGWNLCPDGIYKKPQLVLERMCIARETNN 1931

Query: 62   LASCLDNYALEVSYAYKLGE 3
            LA+C+DNYA+EV++AYK+GE
Sbjct: 1932 LANCIDNYAIEVAFAYKMGE 1951


>gb|AGG13282.1| Replicase [Garlic common latent virus]
          Length = 1951

 Score =  131 bits (330), Expect = 2e-28
 Identities = 60/78 (76%), Positives = 66/78 (84%)
 Frame = -2

Query: 236  RLRHRSTYEDFLSNLKLKAKVDFTAKPTFCGWNLCPDGIYKKPQLIYERMCIAMETNNLA 57
            RLRHR   E FL  LKLKAKV FT KPTFCGWNLC DGIYKKPQL+ ER+CIA ETNNLA
Sbjct: 1836 RLRHRLDQEKFLGLLKLKAKVSFTQKPTFCGWNLCSDGIYKKPQLVLERLCIAKETNNLA 1895

Query: 56   SCLDNYALEVSYAYKLGE 3
             C+DNYALEV++AYK+GE
Sbjct: 1896 CCIDNYALEVAFAYKMGE 1913


>ref|YP_004936159.1| unnamed protein product [Garlic common latent virus]
            gi|359471926|gb|AEV51822.1| replicase [Garlic common
            latent virus]
          Length = 1951

 Score =  131 bits (330), Expect = 2e-28
 Identities = 60/78 (76%), Positives = 66/78 (84%)
 Frame = -2

Query: 236  RLRHRSTYEDFLSNLKLKAKVDFTAKPTFCGWNLCPDGIYKKPQLIYERMCIAMETNNLA 57
            RLRHR   E FL  LKLKAKV FT KPTFCGWNLC DGIYKKPQL+ ER+CIA ETNNLA
Sbjct: 1836 RLRHRLDQEKFLGLLKLKAKVSFTQKPTFCGWNLCSDGIYKKPQLVLERLCIAKETNNLA 1895

Query: 56   SCLDNYALEVSYAYKLGE 3
             C+DNYALEV++AYK+GE
Sbjct: 1896 CCIDNYALEVAFAYKMGE 1913


>ref|YP_002308447.1| RNA-dependent RNA polymerase [Hippeastrum latent virus]
            gi|70906991|gb|AAZ15106.1| RNA-dependent RNA polymerase
            [Hippeastrum latent virus]
          Length = 1971

 Score =  130 bits (328), Expect = 3e-28
 Identities = 56/80 (70%), Positives = 68/80 (85%)
 Frame = -2

Query: 242  AKRLRHRSTYEDFLSNLKLKAKVDFTAKPTFCGWNLCPDGIYKKPQLIYERMCIAMETNN 63
            ++RLR R  +  FL  L+LKAKV FT KPTFCGWNLCPDGIYKKPQL+ ERMC+A E NN
Sbjct: 1850 SRRLRIRDEHSQFLGKLRLKAKVQFTNKPTFCGWNLCPDGIYKKPQLVLERMCVAKENNN 1909

Query: 62   LASCLDNYALEVSYAYKLGE 3
            LA+C+DNYA+EV+YAY++GE
Sbjct: 1910 LANCIDNYAIEVAYAYRMGE 1929


>ref|YP_002302557.1| RdRp polyprotein replicase [Potato latent virus]
            gi|211956480|gb|ACJ14318.1| RdRp polyprotein replicase
            [Potato latent virus]
          Length = 1780

 Score =  130 bits (327), Expect = 4e-28
 Identities = 58/80 (72%), Positives = 68/80 (85%)
 Frame = -2

Query: 242  AKRLRHRSTYEDFLSNLKLKAKVDFTAKPTFCGWNLCPDGIYKKPQLIYERMCIAMETNN 63
            +KRLR + T+E FL  LKLKAKV  T KPTFCGWNLC DGIYKKPQL++ERMCIA E NN
Sbjct: 1662 SKRLRIKKTHESFLGKLKLKAKVQHTEKPTFCGWNLCADGIYKKPQLVFERMCIAKELNN 1721

Query: 62   LASCLDNYALEVSYAYKLGE 3
            L +C+DNYA+EV++AYKLGE
Sbjct: 1722 LHNCIDNYAIEVAFAYKLGE 1741


>sp|P37987.1|RDRP_CVB RecName: Full=RNA replication protein; AltName: Full=ORF 1 protein;
           Includes: RecName: Full=RNA-directed RNA polymerase;
           Includes: RecName: Full=Helicase
          Length = 260

 Score =  128 bits (321), Expect = 2e-27
 Identities = 59/80 (73%), Positives = 68/80 (85%)
 Frame = -2

Query: 242 AKRLRHRSTYEDFLSNLKLKAKVDFTAKPTFCGWNLCPDGIYKKPQLIYERMCIAMETNN 63
           ++RL  +  +E FL+ LKLKAKV F  KPTFCGW+LCPDGIYKKPQL+ ERMCIA E NN
Sbjct: 138 SERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWHLCPDGIYKKPQLVLERMCIAKEKNN 197

Query: 62  LASCLDNYALEVSYAYKLGE 3
           LA+CLDNYA+EVSYAYKLGE
Sbjct: 198 LANCLDNYAIEVSYAYKLGE 217


>gb|AAB20076.2| RNA replicase homolog, partial [Chrysanthemum virus B]
          Length = 261

 Score =  128 bits (321), Expect = 2e-27
 Identities = 59/80 (73%), Positives = 68/80 (85%)
 Frame = -2

Query: 242 AKRLRHRSTYEDFLSNLKLKAKVDFTAKPTFCGWNLCPDGIYKKPQLIYERMCIAMETNN 63
           ++RL  +  +E FL+ LKLKAKV F  KPTFCGW+LCPDGIYKKPQL+ ERMCIA E NN
Sbjct: 139 SERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWHLCPDGIYKKPQLVLERMCIAKEKNN 198

Query: 62  LASCLDNYALEVSYAYKLGE 3
           LA+CLDNYA+EVSYAYKLGE
Sbjct: 199 LANCLDNYAIEVSYAYKLGE 218


>emb|CAO78688.1| polyprotein [Chrysanthemum virus B]
          Length = 2078

 Score =  128 bits (321), Expect = 2e-27
 Identities = 59/80 (73%), Positives = 68/80 (85%)
 Frame = -2

Query: 242  AKRLRHRSTYEDFLSNLKLKAKVDFTAKPTFCGWNLCPDGIYKKPQLIYERMCIAMETNN 63
            ++RL  +  +E FL+ LKLKAKV F  KPTFCGW+LCPDGIYKKPQL+ ERMCIA E NN
Sbjct: 1956 SERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWHLCPDGIYKKPQLVLERMCIAKEKNN 2015

Query: 62   LASCLDNYALEVSYAYKLGE 3
            LA+CLDNYA+EVSYAYKLGE
Sbjct: 2016 LANCLDNYAIEVSYAYKLGE 2035


>emb|CAO78682.1| polyprotein [Chrysanthemum virus B]
          Length = 2079

 Score =  128 bits (321), Expect = 2e-27
 Identities = 59/80 (73%), Positives = 68/80 (85%)
 Frame = -2

Query: 242  AKRLRHRSTYEDFLSNLKLKAKVDFTAKPTFCGWNLCPDGIYKKPQLIYERMCIAMETNN 63
            ++RL  +  +E FL+ LKLKAKV F  KPTFCGW+LCPDGIYKKPQL+ ERMCIA E NN
Sbjct: 1957 SERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWHLCPDGIYKKPQLVLERMCIAKEKNN 2016

Query: 62   LASCLDNYALEVSYAYKLGE 3
            LA+CLDNYA+EVSYAYKLGE
Sbjct: 2017 LANCLDNYAIEVSYAYKLGE 2036


>emb|CAK54343.1| polyprotein, partial [Chrysanthemum virus B]
          Length = 2075

 Score =  128 bits (321), Expect = 2e-27
 Identities = 59/80 (73%), Positives = 68/80 (85%)
 Frame = -2

Query: 242  AKRLRHRSTYEDFLSNLKLKAKVDFTAKPTFCGWNLCPDGIYKKPQLIYERMCIAMETNN 63
            ++RL  +  +E FL+ LKLKAKV F  KPTFCGW+LCPDGIYKKPQL+ ERMCIA E NN
Sbjct: 1953 SERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWHLCPDGIYKKPQLVLERMCIAKEKNN 2012

Query: 62   LASCLDNYALEVSYAYKLGE 3
            LA+CLDNYA+EVSYAYKLGE
Sbjct: 2013 LANCLDNYAIEVSYAYKLGE 2032


>emb|CAK54345.1| polyprotein, partial [Chrysanthemum virus B]
          Length = 2075

 Score =  128 bits (321), Expect = 2e-27
 Identities = 59/80 (73%), Positives = 68/80 (85%)
 Frame = -2

Query: 242  AKRLRHRSTYEDFLSNLKLKAKVDFTAKPTFCGWNLCPDGIYKKPQLIYERMCIAMETNN 63
            ++RL  +  +E FL+ LKLKAKV F  KPTFCGW+LCPDGIYKKPQL+ ERMCIA E NN
Sbjct: 1953 SERLCIKKDHEGFLNKLKLKAKVFFVDKPTFCGWHLCPDGIYKKPQLVLERMCIAKEKNN 2012

Query: 62   LASCLDNYALEVSYAYKLGE 3
            LA+CLDNYA+EVSYAYKLGE
Sbjct: 2013 LANCLDNYAIEVSYAYKLGE 2032


>emb|CAK54344.1| polyprotein, partial [Chrysanthemum virus B]
          Length = 2076

 Score =  128 bits (321), Expect = 2e-27
 Identities = 59/80 (73%), Positives = 68/80 (85%)
 Frame = -2

Query: 242  AKRLRHRSTYEDFLSNLKLKAKVDFTAKPTFCGWNLCPDGIYKKPQLIYERMCIAMETNN 63
            ++RL  +  +E FL+ LKLKAKV F  KPTFCGW+LCPDGIYKKPQL+ ERMCIA E NN
Sbjct: 1954 SERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWHLCPDGIYKKPQLVLERMCIAKEKNN 2013

Query: 62   LASCLDNYALEVSYAYKLGE 3
            LA+CLDNYA+EVSYAYKLGE
Sbjct: 2014 LANCLDNYAIEVSYAYKLGE 2033


>emb|CAI48020.1| RNA replicase, partial [Chrysanthemum virus B]
          Length = 382

 Score =  128 bits (321), Expect = 2e-27
 Identities = 59/80 (73%), Positives = 68/80 (85%)
 Frame = -2

Query: 242 AKRLRHRSTYEDFLSNLKLKAKVDFTAKPTFCGWNLCPDGIYKKPQLIYERMCIAMETNN 63
           ++RL  +  +E FL+ LKLKAKV F  KPTFCGW+LCPDGIYKKPQL+ ERMCIA E NN
Sbjct: 260 SERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWHLCPDGIYKKPQLVLERMCIAKEKNN 319

Query: 62  LASCLDNYALEVSYAYKLGE 3
           LA+CLDNYA+EVSYAYKLGE
Sbjct: 320 LANCLDNYAIEVSYAYKLGE 339


>gb|ACM45991.1| replicase polyprotein, partial [Helleborus net necrosis virus]
          Length = 217

 Score =  127 bits (320), Expect = 3e-27
 Identities = 58/80 (72%), Positives = 69/80 (86%)
 Frame = -2

Query: 242 AKRLRHRSTYEDFLSNLKLKAKVDFTAKPTFCGWNLCPDGIYKKPQLIYERMCIAMETNN 63
           +KRLR  + +E FL  LKLKAKV+FTA PTFCGW L  DGI+KKPQL++ER+CIA ETNN
Sbjct: 97  SKRLRVSTEHESFLGKLKLKAKVNFTANPTFCGWCLTTDGIFKKPQLVFERLCIAKETNN 156

Query: 62  LASCLDNYALEVSYAYKLGE 3
           LA+C+DNYA+EVSYAYKLGE
Sbjct: 157 LANCIDNYAIEVSYAYKLGE 176


>gb|ACM45985.1| replicase polyprotein [Helleborus net necrosis virus]
          Length = 1956

 Score =  127 bits (320), Expect = 3e-27
 Identities = 58/80 (72%), Positives = 69/80 (86%)
 Frame = -2

Query: 242  AKRLRHRSTYEDFLSNLKLKAKVDFTAKPTFCGWNLCPDGIYKKPQLIYERMCIAMETNN 63
            +KRLR  + +E FL  LKLKAKV+FTA PTFCGW L  DGI+KKPQL++ER+CIA ETNN
Sbjct: 1836 SKRLRVSTEHESFLGKLKLKAKVNFTANPTFCGWCLTTDGIFKKPQLVFERLCIAKETNN 1895

Query: 62   LASCLDNYALEVSYAYKLGE 3
            LA+C+DNYA+EVSYAYKLGE
Sbjct: 1896 LANCIDNYAIEVSYAYKLGE 1915


>ref|YP_001430021.1| replicase [Coleus vein necrosis virus] gi|155007628|gb|ABS89245.1|
            replicase [Coleus vein necrosis virus]
          Length = 1977

 Score =  127 bits (319), Expect = 3e-27
 Identities = 57/78 (73%), Positives = 65/78 (83%)
 Frame = -2

Query: 236  RLRHRSTYEDFLSNLKLKAKVDFTAKPTFCGWNLCPDGIYKKPQLIYERMCIAMETNNLA 57
            +LR   T+E FLS LKLKAKV F  KPTFCGWNLC DGIYKKPQL+ ER+CIA ETNNL 
Sbjct: 1855 KLRKVDTHESFLSKLKLKAKVGFVNKPTFCGWNLCSDGIYKKPQLVLERLCIAKETNNLT 1914

Query: 56   SCLDNYALEVSYAYKLGE 3
            SC+DNYA+EVSYAY++ E
Sbjct: 1915 SCIDNYAIEVSYAYRMSE 1932