BLASTX nr result

ID: Gardenia21_contig00042760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00042760
         (503 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDO97355.1| unnamed protein product [Coffea canephora]            177   3e-42
ref|XP_011002970.1| PREDICTED: DNA polymerase V-like [Populus eu...    58   2e-06
ref|XP_002313953.2| hypothetical protein POPTR_0009s08340g [Popu...    57   5e-06

>emb|CDO97355.1| unnamed protein product [Coffea canephora]
          Length = 1299

 Score =  177 bits (449), Expect = 3e-42
 Identities = 97/145 (66%), Positives = 104/145 (71%)
 Frame = -3

Query: 435 YRLHLNIIQAPFFRTYMGNKKRVPSSLDEVEKVHKQIDLSIESTVGSEPLXXXXXXXXXX 256
           YRLHL+ IQA  F  +MGNKKRV SSLDEVEKVHKQID+SIES+ GSEP           
Sbjct: 22  YRLHLSTIQA-LFSGHMGNKKRVSSSLDEVEKVHKQIDISIESSGGSEPFKKRLKKEKKN 80

Query: 255 XXXXXENDFDAPSTSLSTKPISANPMERRKQRKALDKVRHHVQVEAVKTNKVGLDLKENP 76
                ENDFD PSTS S+KP SANPMERRKQRKALDKVRHHV+VEAVKTN+VGLDLKENP
Sbjct: 81  KEAKGENDFDVPSTSPSSKPTSANPMERRKQRKALDKVRHHVEVEAVKTNQVGLDLKENP 140

Query: 75  SKTDEEXXXXXXXXXXXXXXGFHIG 1
           SKTDEE               FHIG
Sbjct: 141 SKTDEEVSSPGTSGGTNVLPEFHIG 165


>ref|XP_011002970.1| PREDICTED: DNA polymerase V-like [Populus euphratica]
           gi|743795630|ref|XP_011002978.1| PREDICTED: DNA
           polymerase V-like [Populus euphratica]
           gi|743795634|ref|XP_011002986.1| PREDICTED: DNA
           polymerase V-like [Populus euphratica]
          Length = 1304

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 45/115 (39%), Positives = 55/115 (47%), Gaps = 9/115 (7%)
 Frame = -3

Query: 387 MGNKKRVPSSLDEVEKVHKQIDLSIE-------STVGSEPLXXXXXXXXXXXXXXXENDF 229
           MG+KKR P+S+ EVE +    D +IE       S   +                    D 
Sbjct: 1   MGSKKRSPNSVAEVEDLDNT-DTNIENAKLEDTSNENASSNSSRKKMKKDKNKETKAPDG 59

Query: 228 DAPSTSLSTKPISANPMERRKQRKALDKVRHHVQVEA--VKTNKVGLDLKENPSK 70
           DA    LST P S  PMERRK+RKALDK R H   E+  VKT K+ +D K   SK
Sbjct: 60  DASKAGLSTIPSSMKPMERRKKRKALDKERLHAASESKEVKTKKMDVDSKVTESK 114


>ref|XP_002313953.2| hypothetical protein POPTR_0009s08340g [Populus trichocarpa]
           gi|550331298|gb|EEE87908.2| hypothetical protein
           POPTR_0009s08340g [Populus trichocarpa]
          Length = 1298

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 43/115 (37%), Positives = 55/115 (47%), Gaps = 9/115 (7%)
 Frame = -3

Query: 387 MGNKKRVPSSLDEVEKVHKQIDLSIEST-------VGSEPLXXXXXXXXXXXXXXXENDF 229
           MG+KKR P+S+ EVE +    D +IE+          +  +                 D 
Sbjct: 1   MGSKKRSPNSVAEVEDLDNT-DTNIENANLEDTNNENASSISSRKKMKKDKNKETEAPDE 59

Query: 228 DAPSTSLSTKPISANPMERRKQRKALDKVRHHVQVEA--VKTNKVGLDLKENPSK 70
           DA    LS  P S  PMERRK+RKALDK R H   E+  VKT K+ +D K   SK
Sbjct: 60  DASKAGLSNIPSSMKPMERRKKRKALDKKRLHAASESKEVKTKKMDVDSKVTESK 114


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