BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00040492
         (372 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_817514.1| RNA polymerase alpha subunit [Coffea arabica] g...   224   1e-56
ref|YP_009108706.1| RNA polymerase alpha subunit [Nerium oleande...   220   3e-55
gb|AGW04620.1| RNA polymerase alpha subunit [Marsdenia astephano...   218   1e-54
gb|AIW05465.1| RNA polymerase alpha subunit [Neobracea bahamensis]    217   2e-54
gb|AGW04774.1| RNA polymerase alpha subunit [Orthosia scoparia]       216   5e-54
gb|AGW04394.1| RNA polymerase alpha subunit [Araujia sericifera]      216   5e-54
gb|AGW05005.1| RNA polymerase alpha subunit [Vincetoxicum rossicum]   215   8e-54
ref|YP_009041119.1| RNA polymerase alpha subunit [Rhazya stricta...   215   1e-53
gb|AGW04697.1| RNA polymerase alpha subunit [Matelea biflora]         214   1e-53
gb|AIW05889.1| RNA polymerase alpha subunit [Rhabdadenia biflora]     214   2e-53
gb|AGW04928.1| RNA polymerase alpha subunit [Telosma cordata]         214   2e-53
ref|YP_009108621.1| RNA polymerase alpha subunit [Echites umbell...   214   2e-53
gb|AGW04317.1| RNA polymerase alpha subunit [Secamone afzelii]        214   3e-53
gb|AER53175.1| RNA polymerase alpha subunit [Asclepias subaphylla]    213   4e-53
gb|AER52935.1| RNA polymerase alpha subunit [Asclepias macrotis]...   213   4e-53
gb|AER52690.1| RNA polymerase alpha subunit [Asclepias cutleri] ...   213   4e-53
gb|AER52608.1| RNA polymerase alpha subunit [Asclepias coulteri]      213   4e-53
gb|AER52444.1| RNA polymerase alpha subunit [Asclepias albicans]...   213   4e-53
ref|YP_008578571.1| RNA polymerase alpha subunit (chloroplast) (...   213   5e-53
ref|YP_008578654.1| RNA polymerase alpha subunit (chloroplast) (...   213   5e-53

>ref|YP_817514.1| RNA polymerase alpha subunit [Coffea arabica]
           gi|122153651|sp|A0A367.1|RPOA_COFAR RecName:
           Full=DNA-directed RNA polymerase subunit alpha;
           Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit alpha; Short=RNA polymerase subunit alpha
           (chloroplast) [Coffea arabica]
           gi|116242195|gb|ABJ89710.1| RNA polymerase alpha subunit
           [Coffea arabica]
          Length = 335

 Score =  224 bits (572), Expect = 1e-56
 Identities = 106/112 (94%), Positives = 109/112 (97%)
 Frame = +3

Query: 3   PQNFQDGSYPIDAVFMPIRNANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 182
           PQNFQDGSYPIDAVFMPIRNANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALH+ASRN
Sbjct: 162 PQNFQDGSYPIDAVFMPIRNANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHQASRN 221

Query: 183 LIDLFIPFLHMEEENSHLENNQHMVPLVPFIFHDKLDKLRKNKKEIALKSIY 338
           LIDLFIPFLHMEE+NSHLENNQH VPL PF FHDKLDKLRKNKKEIALKSI+
Sbjct: 222 LIDLFIPFLHMEEQNSHLENNQHTVPLAPFFFHDKLDKLRKNKKEIALKSIF 273


>ref|YP_009108706.1| RNA polymerase alpha subunit [Nerium oleander]
           gi|290489670|gb|ADD31219.1| RNA polymerase alpha subunit
           protein (chloroplast) [Nerium oleander]
           gi|702075668|gb|AIW05550.1| RNA polymerase alpha subunit
           [Nerium oleander]
          Length = 337

 Score =  220 bits (560), Expect(2) = 3e-55
 Identities = 105/112 (93%), Positives = 108/112 (96%)
 Frame = +3

Query: 3   PQNFQDGSYPIDAVFMPIRNANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 182
           PQNFQDGSYPIDAVFMP+RNAN+SIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN
Sbjct: 162 PQNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 221

Query: 183 LIDLFIPFLHMEEENSHLENNQHMVPLVPFIFHDKLDKLRKNKKEIALKSIY 338
           LIDLFIPFLHMEEENSHLENNQH VPL PFIFHDKL KL KNKKEIALKSI+
Sbjct: 222 LIDLFIPFLHMEEENSHLENNQHAVPLFPFIFHDKLTKLIKNKKEIALKSIF 273



 Score = 21.9 bits (45), Expect(2) = 3e-55
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +1

Query: 334 FIDQLELPDR 363
           FIDQLELP R
Sbjct: 273 FIDQLELPPR 282


>gb|AGW04620.1| RNA polymerase alpha subunit [Marsdenia astephanoides]
          Length = 340

 Score =  218 bits (555), Expect(2) = 1e-54
 Identities = 104/112 (92%), Positives = 107/112 (95%)
 Frame = +3

Query: 3   PQNFQDGSYPIDAVFMPIRNANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 182
           PQN QDGSYPIDAVFMP+RNANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN
Sbjct: 162 PQNVQDGSYPIDAVFMPVRNANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 221

Query: 183 LIDLFIPFLHMEEENSHLENNQHMVPLVPFIFHDKLDKLRKNKKEIALKSIY 338
           LIDLFIPFLHMEEENSHLENNQH VPL PF FHDKL+KL KNKKEIALKSI+
Sbjct: 222 LIDLFIPFLHMEEENSHLENNQHAVPLFPFTFHDKLNKLIKNKKEIALKSIF 273



 Score = 21.9 bits (45), Expect(2) = 1e-54
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +1

Query: 334 FIDQLELPDR 363
           FIDQLELP R
Sbjct: 273 FIDQLELPPR 282


>gb|AIW05465.1| RNA polymerase alpha subunit [Neobracea bahamensis]
          Length = 337

 Score =  217 bits (553), Expect(2) = 2e-54
 Identities = 103/112 (91%), Positives = 108/112 (96%)
 Frame = +3

Query: 3   PQNFQDGSYPIDAVFMPIRNANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 182
           PQNFQDGSYPIDAVFMP+RNAN+SIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN
Sbjct: 162 PQNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 221

Query: 183 LIDLFIPFLHMEEENSHLENNQHMVPLVPFIFHDKLDKLRKNKKEIALKSIY 338
           LIDLFIPFLHMEEENSHLENNQH+VPL PF FHDKL+KL K KKEIALKSI+
Sbjct: 222 LIDLFIPFLHMEEENSHLENNQHVVPLFPFTFHDKLNKLIKKKKEIALKSIF 273



 Score = 21.9 bits (45), Expect(2) = 2e-54
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +1

Query: 334 FIDQLELPDR 363
           FIDQLELP R
Sbjct: 273 FIDQLELPPR 282


>gb|AGW04774.1| RNA polymerase alpha subunit [Orthosia scoparia]
          Length = 340

 Score =  216 bits (550), Expect(2) = 5e-54
 Identities = 103/112 (91%), Positives = 107/112 (95%)
 Frame = +3

Query: 3   PQNFQDGSYPIDAVFMPIRNANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 182
           PQN QDGSYPIDAVFMP+RNAN+SIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN
Sbjct: 162 PQNVQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 221

Query: 183 LIDLFIPFLHMEEENSHLENNQHMVPLVPFIFHDKLDKLRKNKKEIALKSIY 338
           LIDLFIPFLHMEEENSHLENNQH VPL PF FHDKL+KL KNKKEIALKSI+
Sbjct: 222 LIDLFIPFLHMEEENSHLENNQHAVPLFPFTFHDKLNKLIKNKKEIALKSIF 273



 Score = 21.9 bits (45), Expect(2) = 5e-54
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +1

Query: 334 FIDQLELPDR 363
           FIDQLELP R
Sbjct: 273 FIDQLELPPR 282


>gb|AGW04394.1| RNA polymerase alpha subunit [Araujia sericifera]
          Length = 340

 Score =  216 bits (550), Expect(2) = 5e-54
 Identities = 103/112 (91%), Positives = 107/112 (95%)
 Frame = +3

Query: 3   PQNFQDGSYPIDAVFMPIRNANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 182
           PQN QDGSYPIDAVFMP+RNAN+SIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN
Sbjct: 162 PQNVQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 221

Query: 183 LIDLFIPFLHMEEENSHLENNQHMVPLVPFIFHDKLDKLRKNKKEIALKSIY 338
           LIDLFIPFLHMEEENSHLENNQH VPL PF FHDKL+KL KNKKEIALKSI+
Sbjct: 222 LIDLFIPFLHMEEENSHLENNQHAVPLFPFTFHDKLNKLIKNKKEIALKSIF 273



 Score = 21.9 bits (45), Expect(2) = 5e-54
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +1

Query: 334 FIDQLELPDR 363
           FIDQLELP R
Sbjct: 273 FIDQLELPPR 282


>gb|AGW05005.1| RNA polymerase alpha subunit [Vincetoxicum rossicum]
          Length = 337

 Score =  215 bits (548), Expect(2) = 8e-54
 Identities = 103/112 (91%), Positives = 106/112 (94%)
 Frame = +3

Query: 3   PQNFQDGSYPIDAVFMPIRNANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 182
           PQN QDGSYPIDAVFMP+RNAN+SIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN
Sbjct: 162 PQNVQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 221

Query: 183 LIDLFIPFLHMEEENSHLENNQHMVPLVPFIFHDKLDKLRKNKKEIALKSIY 338
           LIDLFIPFLHMEEENSHLENNQH VPL PF FHDKL KL KNKKEIALKSI+
Sbjct: 222 LIDLFIPFLHMEEENSHLENNQHAVPLFPFTFHDKLXKLIKNKKEIALKSIF 273



 Score = 21.9 bits (45), Expect(2) = 8e-54
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +1

Query: 334 FIDQLELPDR 363
           FIDQLELP R
Sbjct: 273 FIDQLELPPR 282


>ref|YP_009041119.1| RNA polymerase alpha subunit [Rhazya stricta]
           gi|608608813|gb|AHW52216.1| RNA polymerase alpha subunit
           (chloroplast) [Rhazya stricta]
           gi|645929242|gb|AIB08766.1| RNA polymerase alpha subunit
           (plastid) [Rhazya stricta]
          Length = 337

 Score =  215 bits (547), Expect = 1e-53
 Identities = 103/112 (91%), Positives = 106/112 (94%)
 Frame = +3

Query: 3   PQNFQDGSYPIDAVFMPIRNANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 182
           PQNFQDGSYPIDAVFMP+RNAN+SIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN
Sbjct: 162 PQNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 221

Query: 183 LIDLFIPFLHMEEENSHLENNQHMVPLVPFIFHDKLDKLRKNKKEIALKSIY 338
           LIDLFIPFLHMEEENSHLENNQH VPL PF FHDKL KL K KKEIALKSI+
Sbjct: 222 LIDLFIPFLHMEEENSHLENNQHAVPLSPFTFHDKLAKLIKKKKEIALKSIF 273


>gb|AGW04697.1| RNA polymerase alpha subunit [Matelea biflora]
          Length = 335

 Score =  214 bits (546), Expect(2) = 1e-53
 Identities = 102/112 (91%), Positives = 107/112 (95%)
 Frame = +3

Query: 3   PQNFQDGSYPIDAVFMPIRNANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 182
           PQN QDGSYPIDAVFMP+RNAN+SIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN
Sbjct: 162 PQNVQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 221

Query: 183 LIDLFIPFLHMEEENSHLENNQHMVPLVPFIFHDKLDKLRKNKKEIALKSIY 338
           LIDLFIPFLHMEEENSHLENNQH VPL PF FHDKL+KL KN+KEIALKSI+
Sbjct: 222 LIDLFIPFLHMEEENSHLENNQHAVPLFPFTFHDKLNKLIKNQKEIALKSIF 273



 Score = 21.9 bits (45), Expect(2) = 1e-53
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +1

Query: 334 FIDQLELPDR 363
           FIDQLELP R
Sbjct: 273 FIDQLELPPR 282


>gb|AIW05889.1| RNA polymerase alpha subunit [Rhabdadenia biflora]
          Length = 335

 Score =  214 bits (545), Expect = 2e-53
 Identities = 102/112 (91%), Positives = 107/112 (95%)
 Frame = +3

Query: 3   PQNFQDGSYPIDAVFMPIRNANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 182
           PQN QDGSYPIDAVFMP+RNAN+SIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN
Sbjct: 162 PQNVQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 221

Query: 183 LIDLFIPFLHMEEENSHLENNQHMVPLVPFIFHDKLDKLRKNKKEIALKSIY 338
           LI+LFIPFLHMEEENSHLENNQH VPL PF FHDKL+KL KNKKEIALKSI+
Sbjct: 222 LINLFIPFLHMEEENSHLENNQHAVPLFPFTFHDKLNKLIKNKKEIALKSIF 273


>gb|AGW04928.1| RNA polymerase alpha subunit [Telosma cordata]
          Length = 340

 Score =  214 bits (544), Expect(2) = 2e-53
 Identities = 102/112 (91%), Positives = 105/112 (93%)
 Frame = +3

Query: 3   PQNFQDGSYPIDAVFMPIRNANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 182
           PQN QDGSYPIDAVFMP+RNAN+SIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN
Sbjct: 162 PQNVQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 221

Query: 183 LIDLFIPFLHMEEENSHLENNQHMVPLVPFIFHDKLDKLRKNKKEIALKSIY 338
           LIDLFIPFLHMEEENSHLENNQH VPL PF FHDKL K  KNKKEIALKSI+
Sbjct: 222 LIDLFIPFLHMEEENSHLENNQHAVPLFPFTFHDKLHKFIKNKKEIALKSIF 273



 Score = 21.9 bits (45), Expect(2) = 2e-53
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +1

Query: 334 FIDQLELPDR 363
           FIDQLELP R
Sbjct: 273 FIDQLELPPR 282


>ref|YP_009108621.1| RNA polymerase alpha subunit [Echites umbellatus]
           gi|702075411|gb|AIW05296.1| RNA polymerase alpha subunit
           [Echites umbellatus]
          Length = 337

 Score =  214 bits (544), Expect(2) = 2e-53
 Identities = 102/112 (91%), Positives = 106/112 (94%)
 Frame = +3

Query: 3   PQNFQDGSYPIDAVFMPIRNANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 182
           PQN QDGSYPIDAVFMP+RNAN+SIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN
Sbjct: 162 PQNVQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 221

Query: 183 LIDLFIPFLHMEEENSHLENNQHMVPLVPFIFHDKLDKLRKNKKEIALKSIY 338
           LIDLFIPFLHMEEENSHLENNQH VPL PF FHDKL+KL K KKEIALKSI+
Sbjct: 222 LIDLFIPFLHMEEENSHLENNQHAVPLFPFTFHDKLNKLIKKKKEIALKSIF 273



 Score = 21.9 bits (45), Expect(2) = 2e-53
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +1

Query: 334 FIDQLELPDR 363
           FIDQLELP R
Sbjct: 273 FIDQLELPPR 282


>gb|AGW04317.1| RNA polymerase alpha subunit [Secamone afzelii]
          Length = 337

 Score =  214 bits (544), Expect = 3e-53
 Identities = 102/112 (91%), Positives = 106/112 (94%)
 Frame = +3

Query: 3   PQNFQDGSYPIDAVFMPIRNANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 182
           PQN QDGSYPIDAVFMP+RNAN+SIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN
Sbjct: 162 PQNVQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 221

Query: 183 LIDLFIPFLHMEEENSHLENNQHMVPLVPFIFHDKLDKLRKNKKEIALKSIY 338
           LIDLFIPFLHMEEENSHLENNQH VPL PF FHDKL+KL K KKEIALKSI+
Sbjct: 222 LIDLFIPFLHMEEENSHLENNQHAVPLFPFTFHDKLNKLIKKKKEIALKSIF 273


>gb|AER53175.1| RNA polymerase alpha subunit [Asclepias subaphylla]
          Length = 337

 Score =  213 bits (542), Expect(2) = 4e-53
 Identities = 102/112 (91%), Positives = 105/112 (93%)
 Frame = +3

Query: 3   PQNFQDGSYPIDAVFMPIRNANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 182
           PQN  DGSYPIDAVFMP+RNAN+SIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN
Sbjct: 162 PQNVPDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 221

Query: 183 LIDLFIPFLHMEEENSHLENNQHMVPLVPFIFHDKLDKLRKNKKEIALKSIY 338
           LIDLFIPFLHMEEENSHLENNQH VPL PF FHDKL KL KNKKEIALKSI+
Sbjct: 222 LIDLFIPFLHMEEENSHLENNQHAVPLFPFTFHDKLTKLIKNKKEIALKSIF 273



 Score = 21.9 bits (45), Expect(2) = 4e-53
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +1

Query: 334 FIDQLELPDR 363
           FIDQLELP R
Sbjct: 273 FIDQLELPPR 282


>gb|AER52935.1| RNA polymerase alpha subunit [Asclepias macrotis]
           gi|355332333|gb|AER53015.1| RNA polymerase alpha subunit
           [Asclepias macrotis]
          Length = 337

 Score =  213 bits (542), Expect(2) = 4e-53
 Identities = 102/112 (91%), Positives = 105/112 (93%)
 Frame = +3

Query: 3   PQNFQDGSYPIDAVFMPIRNANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 182
           PQN  DGSYPIDAVFMP+RNAN+SIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN
Sbjct: 162 PQNVPDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 221

Query: 183 LIDLFIPFLHMEEENSHLENNQHMVPLVPFIFHDKLDKLRKNKKEIALKSIY 338
           LIDLFIPFLHMEEENSHLENNQH VPL PF FHDKL KL KNKKEIALKSI+
Sbjct: 222 LIDLFIPFLHMEEENSHLENNQHAVPLFPFTFHDKLTKLIKNKKEIALKSIF 273



 Score = 21.9 bits (45), Expect(2) = 4e-53
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +1

Query: 334 FIDQLELPDR 363
           FIDQLELP R
Sbjct: 273 FIDQLELPPR 282


>gb|AER52690.1| RNA polymerase alpha subunit [Asclepias cutleri]
           gi|355332087|gb|AER52772.1| RNA polymerase alpha subunit
           [Asclepias cutleri]
          Length = 337

 Score =  213 bits (542), Expect(2) = 4e-53
 Identities = 102/112 (91%), Positives = 105/112 (93%)
 Frame = +3

Query: 3   PQNFQDGSYPIDAVFMPIRNANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 182
           PQN  DGSYPIDAVFMP+RNAN+SIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN
Sbjct: 162 PQNVPDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 221

Query: 183 LIDLFIPFLHMEEENSHLENNQHMVPLVPFIFHDKLDKLRKNKKEIALKSIY 338
           LIDLFIPFLHMEEENSHLENNQH VPL PF FHDKL KL KNKKEIALKSI+
Sbjct: 222 LIDLFIPFLHMEEENSHLENNQHAVPLFPFTFHDKLTKLIKNKKEIALKSIF 273



 Score = 21.9 bits (45), Expect(2) = 4e-53
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +1

Query: 334 FIDQLELPDR 363
           FIDQLELP R
Sbjct: 273 FIDQLELPPR 282


>gb|AER52608.1| RNA polymerase alpha subunit [Asclepias coulteri]
          Length = 337

 Score =  213 bits (542), Expect(2) = 4e-53
 Identities = 102/112 (91%), Positives = 105/112 (93%)
 Frame = +3

Query: 3   PQNFQDGSYPIDAVFMPIRNANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 182
           PQN  DGSYPIDAVFMP+RNAN+SIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN
Sbjct: 162 PQNVPDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 221

Query: 183 LIDLFIPFLHMEEENSHLENNQHMVPLVPFIFHDKLDKLRKNKKEIALKSIY 338
           LIDLFIPFLHMEEENSHLENNQH VPL PF FHDKL KL KNKKEIALKSI+
Sbjct: 222 LIDLFIPFLHMEEENSHLENNQHAVPLFPFTFHDKLTKLIKNKKEIALKSIF 273



 Score = 21.9 bits (45), Expect(2) = 4e-53
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +1

Query: 334 FIDQLELPDR 363
           FIDQLELP R
Sbjct: 273 FIDQLELPPR 282


>gb|AER52444.1| RNA polymerase alpha subunit [Asclepias albicans]
           gi|355331838|gb|AER52526.1| RNA polymerase alpha subunit
           [Asclepias albicans] gi|355332169|gb|AER52853.1| RNA
           polymerase alpha subunit [Asclepias leptopus]
           gi|355332412|gb|AER53093.1| RNA polymerase alpha subunit
           [Asclepias masonii] gi|355332576|gb|AER53255.1| RNA
           polymerase alpha subunit [Asclepias subaphylla]
           gi|355332657|gb|AER53335.1| RNA polymerase alpha subunit
           [Asclepias subulata] gi|355332740|gb|AER53417.1| RNA
           polymerase alpha subunit [Asclepias subulata]
           gi|355332823|gb|AER53499.1| RNA polymerase alpha subunit
           [Asclepias albicans x Asclepias subulata]
          Length = 337

 Score =  213 bits (542), Expect(2) = 4e-53
 Identities = 102/112 (91%), Positives = 105/112 (93%)
 Frame = +3

Query: 3   PQNFQDGSYPIDAVFMPIRNANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 182
           PQN  DGSYPIDAVFMP+RNAN+SIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN
Sbjct: 162 PQNVPDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 221

Query: 183 LIDLFIPFLHMEEENSHLENNQHMVPLVPFIFHDKLDKLRKNKKEIALKSIY 338
           LIDLFIPFLHMEEENSHLENNQH VPL PF FHDKL KL KNKKEIALKSI+
Sbjct: 222 LIDLFIPFLHMEEENSHLENNQHAVPLFPFTFHDKLTKLIKNKKEIALKSIF 273



 Score = 21.9 bits (45), Expect(2) = 4e-53
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +1

Query: 334 FIDQLELPDR 363
           FIDQLELP R
Sbjct: 273 FIDQLELPPR 282


>ref|YP_008578571.1| RNA polymerase alpha subunit (chloroplast) (chloroplast) [Asclepias
           nivea] gi|544187128|gb|AGW05066.1| RNA polymerase alpha
           subunit (chloroplast) (chloroplast) [Asclepias nivea]
          Length = 337

 Score =  213 bits (542), Expect = 5e-53
 Identities = 102/112 (91%), Positives = 105/112 (93%)
 Frame = +3

Query: 3   PQNFQDGSYPIDAVFMPIRNANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 182
           PQN  DGSYPIDAVFMP+RNAN+SIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN
Sbjct: 162 PQNVPDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 221

Query: 183 LIDLFIPFLHMEEENSHLENNQHMVPLVPFIFHDKLDKLRKNKKEIALKSIY 338
           LIDLFIPFLHMEEENSHLENNQH VPL PF FHDKL KL KNKKEIALKSI+
Sbjct: 222 LIDLFIPFLHMEEENSHLENNQHAVPLFPFTFHDKLTKLIKNKKEIALKSIF 273


>ref|YP_008578654.1| RNA polymerase alpha subunit (chloroplast) (chloroplast) [Asclepias
           syriaca] gi|326200311|gb|ADZ52350.1| RNA polymerase
           alpha subunit (chloroplast) [Asclepias syriaca]
           gi|544187240|gb|AGW05168.1| RNA polymerase alpha subunit
           (chloroplast) (chloroplast) [Asclepias syriaca]
          Length = 340

 Score =  213 bits (541), Expect(2) = 5e-53
 Identities = 101/112 (90%), Positives = 105/112 (93%)
 Frame = +3

Query: 3   PQNFQDGSYPIDAVFMPIRNANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 182
           PQN  DGSYPIDAVFMP+RNAN+S+HSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN
Sbjct: 162 PQNVPDGSYPIDAVFMPVRNANHSVHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 221

Query: 183 LIDLFIPFLHMEEENSHLENNQHMVPLVPFIFHDKLDKLRKNKKEIALKSIY 338
           LIDLFIPFLHMEEENSHLENNQH VPL PF FHDKL KL KNKKEIALKSI+
Sbjct: 222 LIDLFIPFLHMEEENSHLENNQHRVPLFPFTFHDKLTKLIKNKKEIALKSIF 273



 Score = 21.9 bits (45), Expect(2) = 5e-53
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +1

Query: 334 FIDQLELPDR 363
           FIDQLELP R
Sbjct: 273 FIDQLELPPR 282