BLASTX nr result

ID: Gardenia21_contig00039770 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00039770
         (471 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP15207.1| unnamed protein product [Coffea canephora]             82   2e-13
ref|XP_009804945.1| PREDICTED: F-box protein At3g07870-like [Nic...    60   6e-07
ref|XP_009797340.1| PREDICTED: F-box protein At3g07870-like isof...    59   1e-06

>emb|CDP15207.1| unnamed protein product [Coffea canephora]
          Length = 278

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 60/156 (38%), Positives = 77/156 (49%), Gaps = 7/156 (4%)
 Frame = +1

Query: 1   GVFVFGMDAEDFSTLPHPGSSCRSRPWHWHRNMDLFVADEHFNILQFGR------LRQKN 162
           G+ +FGMD EDFSTLPHPG    SR    HRNM L V DEH +     R      +    
Sbjct: 126 GITIFGMDTEDFSTLPHPGDEYNSRV--NHRNMRLLVVDEHLSFCNVYRGYTVIDIWLLE 183

Query: 163 *HMDFTGRTKWKLNLNL-VERPLECTDDDGSNRIDCTRAVDIQNGELWLQCVAKGMFVYQ 339
            +  +    KW L   L   RPLE      S R++    V  QNGEL L C  +G+ +Y 
Sbjct: 184 DYASWAWVRKWCLRPILDGPRPLESECYGFSRRLE---VVHFQNGELLLDCGERGLVLYH 240

Query: 340 LEQNTVRRFGGRLLGINGSTRNLCTPHTASLVSPYR 447
           L+QNT ++ G        S ++ C P T SLV  +R
Sbjct: 241 LDQNTFKKLGRP----PTSYQHRCIPCTKSLVPLHR 272


>ref|XP_009804945.1| PREDICTED: F-box protein At3g07870-like [Nicotiana sylvestris]
          Length = 379

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 44/137 (32%), Positives = 66/137 (48%), Gaps = 16/137 (11%)
 Frame = +1

Query: 1   GVFVFGMDAEDFSTLPHPGSSCRSRPWHWHRNMDLFVADEHF---NILQFG--------- 144
           G+ VF MD E+ ST+PHPGS C S+    HR M L V D+     N+L            
Sbjct: 223 GIMVFRMDKEELSTIPHPGSMCNSK--RRHRTMTLLVKDDSLCFCNLLISNYVVDIWILK 280

Query: 145 ----RLRQKN*HMDFTGRTKWKLNLNLVERPLECTDDDGSNRIDCTRAVDIQNGELWLQC 312
               R+  K  ++D      +  +L  +E  +     D   RI   + ++IQ GEL L  
Sbjct: 281 DYEMRIWIKRYNIDLCDERIFPFSLYFME--ISSLTSDICGRI---KLLNIQEGELLLHL 335

Query: 313 VAKGMFVYQLEQNTVRR 363
           + +G+F+Y L+  TV+R
Sbjct: 336 LGQGLFLYNLDHRTVKR 352


>ref|XP_009797340.1| PREDICTED: F-box protein At3g07870-like isoform X1 [Nicotiana
           sylvestris]
          Length = 404

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
 Frame = +1

Query: 1   GVFVFGMDAEDFSTLPHPGSSCRSRPWHWHRNMDLFVADEHFNILQFGRLRQKN*HMD-- 174
           G+ V  +D E+ S +PHPGS C S  W  H  M L V +E    L F +L      MD  
Sbjct: 250 GIMVLKIDKEELSIMPHPGSVCSS--WKTHHTMSLLVKEE---CLSFCQLLIFENAMDIW 304

Query: 175 -------FTGRTKWKLNLNLVERPLECTDDDGSNRIDC-------TRAVDIQNGELWLQC 312
                  +    ++K+NL    + ++C+   G    +           +D   GEL L  
Sbjct: 305 ILEDYETWVWTKRFKVNLVFNNQGIDCSLPFGHTYWEVILYMSWQIEPLDFLEGELVLYW 364

Query: 313 VAKGMFVYQLEQNTVRRFGGRLLGINGSTRNLCTPHTASLVS 438
             +G+F+Y ++ N +R    ++ G  GS R  C P+  SL++
Sbjct: 365 YNRGLFMYNMDHNNLR----KIEGPQGSKRFTCMPYIKSLLT 402