BLASTX nr result
ID: Gardenia21_contig00039770
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Gardenia21_contig00039770 (471 letters) Database: ./nr 77,306,371 sequences; 28,104,191,420 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CDP15207.1| unnamed protein product [Coffea canephora] 82 2e-13 ref|XP_009804945.1| PREDICTED: F-box protein At3g07870-like [Nic... 60 6e-07 ref|XP_009797340.1| PREDICTED: F-box protein At3g07870-like isof... 59 1e-06 >emb|CDP15207.1| unnamed protein product [Coffea canephora] Length = 278 Score = 81.6 bits (200), Expect = 2e-13 Identities = 60/156 (38%), Positives = 77/156 (49%), Gaps = 7/156 (4%) Frame = +1 Query: 1 GVFVFGMDAEDFSTLPHPGSSCRSRPWHWHRNMDLFVADEHFNILQFGR------LRQKN 162 G+ +FGMD EDFSTLPHPG SR HRNM L V DEH + R + Sbjct: 126 GITIFGMDTEDFSTLPHPGDEYNSRV--NHRNMRLLVVDEHLSFCNVYRGYTVIDIWLLE 183 Query: 163 *HMDFTGRTKWKLNLNL-VERPLECTDDDGSNRIDCTRAVDIQNGELWLQCVAKGMFVYQ 339 + + KW L L RPLE S R++ V QNGEL L C +G+ +Y Sbjct: 184 DYASWAWVRKWCLRPILDGPRPLESECYGFSRRLE---VVHFQNGELLLDCGERGLVLYH 240 Query: 340 LEQNTVRRFGGRLLGINGSTRNLCTPHTASLVSPYR 447 L+QNT ++ G S ++ C P T SLV +R Sbjct: 241 LDQNTFKKLGRP----PTSYQHRCIPCTKSLVPLHR 272 >ref|XP_009804945.1| PREDICTED: F-box protein At3g07870-like [Nicotiana sylvestris] Length = 379 Score = 60.1 bits (144), Expect = 6e-07 Identities = 44/137 (32%), Positives = 66/137 (48%), Gaps = 16/137 (11%) Frame = +1 Query: 1 GVFVFGMDAEDFSTLPHPGSSCRSRPWHWHRNMDLFVADEHF---NILQFG--------- 144 G+ VF MD E+ ST+PHPGS C S+ HR M L V D+ N+L Sbjct: 223 GIMVFRMDKEELSTIPHPGSMCNSK--RRHRTMTLLVKDDSLCFCNLLISNYVVDIWILK 280 Query: 145 ----RLRQKN*HMDFTGRTKWKLNLNLVERPLECTDDDGSNRIDCTRAVDIQNGELWLQC 312 R+ K ++D + +L +E + D RI + ++IQ GEL L Sbjct: 281 DYEMRIWIKRYNIDLCDERIFPFSLYFME--ISSLTSDICGRI---KLLNIQEGELLLHL 335 Query: 313 VAKGMFVYQLEQNTVRR 363 + +G+F+Y L+ TV+R Sbjct: 336 LGQGLFLYNLDHRTVKR 352 >ref|XP_009797340.1| PREDICTED: F-box protein At3g07870-like isoform X1 [Nicotiana sylvestris] Length = 404 Score = 59.3 bits (142), Expect = 1e-06 Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 16/162 (9%) Frame = +1 Query: 1 GVFVFGMDAEDFSTLPHPGSSCRSRPWHWHRNMDLFVADEHFNILQFGRLRQKN*HMD-- 174 G+ V +D E+ S +PHPGS C S W H M L V +E L F +L MD Sbjct: 250 GIMVLKIDKEELSIMPHPGSVCSS--WKTHHTMSLLVKEE---CLSFCQLLIFENAMDIW 304 Query: 175 -------FTGRTKWKLNLNLVERPLECTDDDGSNRIDC-------TRAVDIQNGELWLQC 312 + ++K+NL + ++C+ G + +D GEL L Sbjct: 305 ILEDYETWVWTKRFKVNLVFNNQGIDCSLPFGHTYWEVILYMSWQIEPLDFLEGELVLYW 364 Query: 313 VAKGMFVYQLEQNTVRRFGGRLLGINGSTRNLCTPHTASLVS 438 +G+F+Y ++ N +R ++ G GS R C P+ SL++ Sbjct: 365 YNRGLFMYNMDHNNLR----KIEGPQGSKRFTCMPYIKSLLT 402