BLASTX nr result

ID: Gardenia21_contig00039069 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00039069
         (377 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010556317.1| PREDICTED: translocon-associated protein sub...    58   2e-06
gb|KDO47376.1| hypothetical protein CISIN_1g029361mg [Citrus sin...    58   3e-06
ref|XP_006446972.1| hypothetical protein CICLE_v10016821mg [Citr...    58   3e-06
ref|XP_010909330.1| PREDICTED: uncharacterized protein LOC105035...    57   4e-06
ref|XP_008791075.1| PREDICTED: translocon-associated protein sub...    57   7e-06
ref|XP_008677241.1| PREDICTED: translocon-associated protein bet...    56   9e-06
ref|NP_001149647.1| translocon-associated protein beta containin...    56   9e-06

>ref|XP_010556317.1| PREDICTED: translocon-associated protein subunit beta-like
           [Tarenaya hassleriana]
          Length = 190

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 29/49 (59%), Positives = 38/49 (77%)
 Frame = -2

Query: 376 LETLADKVTLGKFELAKRLPAKHGSHISVILLVGCFAHIIVSPSKSSSR 230
           L+ LA++V   KFE AKRL AK+GSH+SVI LV  FA++I SPSK+S +
Sbjct: 140 LDVLAERVPEQKFEWAKRLAAKYGSHVSVISLVVAFAYLIASPSKASKK 188


>gb|KDO47376.1| hypothetical protein CISIN_1g029361mg [Citrus sinensis]
          Length = 194

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 30/55 (54%), Positives = 40/55 (72%)
 Frame = -2

Query: 376 LETLADKVTLGKFELAKRLPAKHGSHISVILLVGCFAHIIVSPSKSSSRNVIKKR 212
           L+ LA+K T  K ELAKRL AK+GS ISVI ++  F ++I SPSKS+++   KKR
Sbjct: 140 LDVLAEKPTENKLELAKRLLAKYGSQISVISIIVLFVYLITSPSKSAAKGSKKKR 194


>ref|XP_006446972.1| hypothetical protein CICLE_v10016821mg [Citrus clementina]
           gi|568829093|ref|XP_006468865.1| PREDICTED:
           translocon-associated protein subunit beta-like [Citrus
           sinensis] gi|557549583|gb|ESR60212.1| hypothetical
           protein CICLE_v10016821mg [Citrus clementina]
          Length = 194

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 30/55 (54%), Positives = 40/55 (72%)
 Frame = -2

Query: 376 LETLADKVTLGKFELAKRLPAKHGSHISVILLVGCFAHIIVSPSKSSSRNVIKKR 212
           L+ LA+K T  K ELAKRL AK+GS ISVI ++  F ++I SPSKS+++   KKR
Sbjct: 140 LDVLAEKPTENKLELAKRLLAKYGSQISVISIIVLFVYLITSPSKSAAKGSKKKR 194


>ref|XP_010909330.1| PREDICTED: uncharacterized protein LOC105035463 [Elaeis guineensis]
          Length = 196

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 30/55 (54%), Positives = 39/55 (70%)
 Frame = -2

Query: 376 LETLADKVTLGKFELAKRLPAKHGSHISVILLVGCFAHIIVSPSKSSSRNVIKKR 212
           L+ LAD+    KFE AKRL AK+GS +SV+LLV  F ++I +PSKSS+    KKR
Sbjct: 141 LDILADRPPEKKFEWAKRLAAKYGSLVSVLLLVALFIYLIATPSKSSAAKASKKR 195


>ref|XP_008791075.1| PREDICTED: translocon-associated protein subunit beta [Phoenix
           dactylifera]
          Length = 196

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 30/55 (54%), Positives = 39/55 (70%)
 Frame = -2

Query: 376 LETLADKVTLGKFELAKRLPAKHGSHISVILLVGCFAHIIVSPSKSSSRNVIKKR 212
           L+ LAD+    KFE AKRL AK+GS +SV+LLV  F ++I +PSKSS+    KKR
Sbjct: 141 LDLLADRPPEKKFEWAKRLVAKYGSLVSVLLLVTLFIYVIATPSKSSAAKASKKR 195


>ref|XP_008677241.1| PREDICTED: translocon-associated protein beta containing protein
           isoform X1 [Zea mays]
          Length = 189

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 28/55 (50%), Positives = 40/55 (72%)
 Frame = -2

Query: 376 LETLADKVTLGKFELAKRLPAKHGSHISVILLVGCFAHIIVSPSKSSSRNVIKKR 212
           L+ LA+++   KFE AKRL AK+GS +SV+  VG F +++ SPSKSSS+   K+R
Sbjct: 135 LDILAERLPEKKFEWAKRLVAKYGSLVSVVSFVGLFIYLVASPSKSSSKGSKKRR 189


>ref|NP_001149647.1| translocon-associated protein beta containing protein precursor
           [Zea mays] gi|195628792|gb|ACG36225.1|
           translocon-associated protein beta containing protein
           [Zea mays] gi|223974959|gb|ACN31667.1| unknown [Zea
           mays] gi|414868519|tpg|DAA47076.1| TPA:
           Translocon-associated protein beta containing protein
           [Zea mays]
          Length = 190

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 28/55 (50%), Positives = 40/55 (72%)
 Frame = -2

Query: 376 LETLADKVTLGKFELAKRLPAKHGSHISVILLVGCFAHIIVSPSKSSSRNVIKKR 212
           L+ LA+++   KFE AKRL AK+GS +SV+  VG F +++ SPSKSSS+   K+R
Sbjct: 136 LDILAERLPEKKFEWAKRLVAKYGSLVSVVSFVGLFIYLVASPSKSSSKGSKKRR 190


Top