BLASTX nr result

ID: Gardenia21_contig00034476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00034476
         (232 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP05521.1| unnamed protein product [Coffea canephora]             64   6e-08
gb|ABQ57586.1| NBS-LRR resistance-like protein RGC247 [Helianthu...    57   7e-06

>emb|CDP05521.1| unnamed protein product [Coffea canephora]
          Length = 1020

 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 35/65 (53%), Positives = 43/65 (66%)
 Frame = -3

Query: 200 NGSKILMISQIKNVAGSLRNGSPTYYLIFLSLIESWDLFEHKVFPNGSCPQDLNGNRKEH 21
           NGSK+LM S+IK+VA + +N    + L FLS  ESWDLFE KVF N SCPQ+L    K  
Sbjct: 449 NGSKVLMTSRIKDVALNPKNECTPHCLRFLSEDESWDLFERKVFGNESCPQELMEMGKNI 508

Query: 20  CSKMK 6
            +K K
Sbjct: 509 VAKCK 513


>gb|ABQ57586.1| NBS-LRR resistance-like protein RGC247 [Helianthus deserticola]
          Length = 170

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 27/59 (45%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
 Frame = -3

Query: 197 GSKILMISQIKNVAGSLRNGSPTYYLIFLSLIESWDLFEHKVF-PNGSCPQDLNGNRKE 24
           GS+IL+ S++ NVA +++  SP + L FL++ ESWDL  HKVF  +G+CP +L    K+
Sbjct: 100 GSRILVTSRLMNVASNIKQDSPIHRLRFLTVEESWDLLRHKVFAEDGTCPTNLQETGKQ 158


Top