BLASTX nr result
ID: Gardenia21_contig00031263
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Gardenia21_contig00031263
(619 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|73210... 75 2e-18
ref|XP_013668797.1| PREDICTED: uncharacterized protein LOC106373... 72 1e-16
ref|XP_009124282.1| PREDICTED: putative ribonuclease H protein A... 70 1e-16
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta... 70 2e-16
ref|XP_009116295.1| PREDICTED: putative ribonuclease H protein A... 69 5e-16
ref|XP_013658112.1| PREDICTED: uncharacterized protein LOC106362... 69 7e-16
ref|XP_009119466.1| PREDICTED: uncharacterized protein LOC103844... 68 9e-16
gb|AID60103.1| hypothetical protein [Brassica napus] 66 2e-15
ref|XP_009123770.1| PREDICTED: putative ribonuclease H protein A... 69 2e-15
ref|XP_013710279.1| PREDICTED: uncharacterized protein LOC106414... 66 3e-15
ref|XP_009101981.1| PREDICTED: putative ribonuclease H protein A... 69 3e-15
ref|XP_009126860.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 65 3e-15
ref|XP_013659474.1| PREDICTED: uncharacterized protein LOC106364... 67 8e-14
ref|XP_009151561.1| PREDICTED: putative ribonuclease H protein A... 63 2e-13
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript... 57 3e-13
ref|XP_009344908.1| PREDICTED: uncharacterized protein LOC103936... 61 1e-12
gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ... 68 1e-12
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga... 62 1e-12
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 62 1e-12
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 62 1e-12
>emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|7321072|emb|CAB82119.1|
putative protein [Arabidopsis thaliana]
Length = 947
Score = 74.7 bits (182), Expect(2) = 2e-18
Identities = 36/111 (32%), Positives = 54/111 (48%)
Frame = -2
Query: 351 KVLRRGLKWRIGTSKDIQFWNGTWLVEHPLREVCETEFPQEEMEKRVGECWCERRGWKRE 172
+V+ RG +W +G +DI FW+ WL L E P E E RV + W GWK +
Sbjct: 572 EVVSRGSRWVVGNGRDILFWSDNWLSHEALINRAVIEIPNSEKELRVKDLWANGLGWKLD 631
Query: 171 ELGKSLNADLLGRLIRVQIVWTTGNKDRVRWDQDASGCFTTSSANNMMLEE 19
++ ++ L V + TG +DR+ W A G FT SA ++ E+
Sbjct: 632 KIEPYISYHTRLELAAVVVDSVTGARDRLSWGYSADGVFTVKSAYRLLTED 682
Score = 45.1 bits (105), Expect(2) = 2e-18
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = -3
Query: 617 KLHHVNWEIVMGPRSRG-LGTRRLQLANKVALAKLG*RMIK*SDNLWA*VLGKNYKGGIR 441
KLH V W+ V P+S G LG R + NK ++K+G R+I +LWA +L Y+ G+R
Sbjct: 512 KLHLVAWDRVCLPKSEGGLGIRTSKCMNKALVSKVGWRLINDRYSLWARILRSKYRVGLR 571
>ref|XP_013668797.1| PREDICTED: uncharacterized protein LOC106373127 [Brassica napus]
Length = 1818
Score = 72.0 bits (175), Expect(2) = 1e-16
Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Frame = -2
Query: 384 SYVWRSILEGWK-VLRRGLKWRIGTSKDIQFWNGTWLVEHPLREVCETEFPQEEMEKRVG 208
S WRS+ G + V+ RG +W +G + I+FW+ TWL + PL + PQ + + +
Sbjct: 1352 SSTWRSVGLGLREVVARGHRWVLGDGRQIKFWSDTWLSDDPLLLSLTSVLPQGQENQLIR 1411
Query: 207 ECWCERRGWKREELGKSLNADLLGRLIRVQIVWTTGNKDRVRWDQDASGCFTTSSANNMM 28
+ W + GW E + L D L+ V TG KDRV W +G F+ SA ++
Sbjct: 1412 DLWKDGIGWDLENIAPYLTEDKRLELLAVVPDHVTGAKDRVAWKGTNNGSFSVKSAYRLL 1471
Score = 41.6 bits (96), Expect(2) = 1e-16
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = -3
Query: 617 KLHHVNWEIVMGPRSRG-LGTRRLQLANKVALAKLG*RMIK*SDNLWA*VLGKNYKGG 447
KLH V W+ + ++ G LG RR + NK +AK+G R++ +LWA V+ K Y G
Sbjct: 1280 KLHLVAWDKICQHKNEGGLGIRRSKEMNKALIAKVGWRVMNNEQSLWAQVVRKKYSVG 1337
>ref|XP_009124282.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 1011
Score = 70.5 bits (171), Expect(2) = 1e-16
Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 1/129 (0%)
Frame = -2
Query: 396 RSRKSYVWRSILEGWK-VLRRGLKWRIGTSKDIQFWNGTWLVEHPLREVCETEFPQEEME 220
RS S W S++ G + V+ G W IG +DI+FW WL PL V E P+ +
Sbjct: 542 RSNGSSTWSSVVLGIREVVMTGHSWAIGNGRDIKFWTDRWLSNQPLSSVTIGELPEGYED 601
Query: 219 KRVGECWCERRGWKREELGKSLNADLLGRLIRVQIVWTTGNKDRVRWDQDASGCFTTSSA 40
V E W GW + + + L V + ++DR+ W Q +G FT SA
Sbjct: 602 VTVREMWVVGGGWDLAHIAPFVTDETRLELAAVVVDTVNDSEDRLAWSQTNNGQFTVKSA 661
Query: 39 NNMMLEEEA 13
++ ++A
Sbjct: 662 YALITRDDA 670
Score = 42.7 bits (99), Expect(2) = 1e-16
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = -3
Query: 611 HHVNWEIVMGPRSRG-LGTRRLQLANKVALAKLG*RMIK*SDNLWA*VLGKNYKGG 447
H V+WE + P++ G LG R + NK +AK+G R+++ +++LWA VL Y G
Sbjct: 476 HLVSWEKICKPKAEGGLGIRGSRDMNKALIAKVGWRLLRDTESLWARVLRSKYNVG 531
>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 70.1 bits (170), Expect(2) = 2e-16
Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 1/126 (0%)
Frame = -2
Query: 402 RERSRKSYVWRSILEGWK-VLRRGLKWRIGTSKDIQFWNGTWLVEHPLREVCETEFPQEE 226
+ + R S WRS+ G + V+ +G+ W G I+FW WL++ PL E+ P+ E
Sbjct: 764 KPQPRWSSTWRSVAVGLREVVVKGVGWVPGDGCTIRFWLDRWLLQEPLVELGTDMIPEGE 823
Query: 225 MEKRVGECWCERRGWKREELGKSLNADLLGRLIRVQIVWTTGNKDRVRWDQDASGCFTTS 46
K + W GW E LG L + RL+ V + GN D + W G FT
Sbjct: 824 RIKVAADYWLPGSGWNLEILGLYLPETVKRRLLSVVVQVFLGNGDEISWKGTQDGAFTVR 883
Query: 45 SANNMM 28
SA +++
Sbjct: 884 SAYSLL 889
Score = 42.7 bits (99), Expect(2) = 2e-16
Identities = 22/61 (36%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Frame = -3
Query: 617 KLHHVNWEIVMGPRSRG-LGTRRLQLANKVALAKLG*RMIK*SDNLWA*VLGKNYK-GGI 444
K H ++W + P++ G +G R + NK +AK+G R+++ ++LWA V+ K YK GG+
Sbjct: 698 KQHLLSWRKICKPKAEGGIGLRSARDMNKALVAKVGWRLLQDKESLWARVVRKKYKVGGV 757
Query: 443 R 441
+
Sbjct: 758 Q 758
>ref|XP_009116295.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 782
Score = 68.6 bits (166), Expect(2) = 5e-16
Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 1/129 (0%)
Frame = -2
Query: 396 RSRKSYVWRSILEGWK-VLRRGLKWRIGTSKDIQFWNGTWLVEHPLREVCETEFPQEEME 220
RS S W S++ G + V+ G W IG +DI+FW WL PL V E P+ +
Sbjct: 313 RSNGSSTWSSVVLGIREVVMTGHSWAIGNGRDIKFWTDRWLSNQPLSSVTIGELPEGYED 372
Query: 219 KRVGECWCERRGWKREELGKSLNADLLGRLIRVQIVWTTGNKDRVRWDQDASGCFTTSSA 40
V E W GW + + + L V + ++DR+ W Q +G T SA
Sbjct: 373 VTVREMWVVGGGWDLAHIAPFVTDETRLELAAVVVDTVNDSEDRLAWSQTKNGQLTVKSA 432
Query: 39 NNMMLEEEA 13
++ ++A
Sbjct: 433 YALITRDDA 441
Score = 42.7 bits (99), Expect(2) = 5e-16
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = -3
Query: 611 HHVNWEIVMGPRSRG-LGTRRLQLANKVALAKLG*RMIK*SDNLWA*VLGKNYKGG 447
H V+WE + P++ G LG R + NK +AK+G R+++ +++LWA VL Y G
Sbjct: 247 HLVSWEKICKPKAEGGLGIRGSRDMNKALIAKVGWRLLRDTESLWARVLRSKYNVG 302
>ref|XP_013658112.1| PREDICTED: uncharacterized protein LOC106362816 [Brassica napus]
Length = 1707
Score = 68.6 bits (166), Expect(2) = 7e-16
Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Frame = -2
Query: 384 SYVWRSILEGWK-VLRRGLKWRIGTSKDIQFWNGTWLVEHPLREVCETEFPQEEMEKRVG 208
S WRS+ G + V+ RG +W +G + I+FW+ TWL + PL + PQ + + +
Sbjct: 1244 SSTWRSVGLGLREVVVRGHRWVLGDGRQIKFWSDTWLSDDPLLLSITSVLPQGQENQLIK 1303
Query: 207 ECWCERRGWKREELGKSLNADLLGRLIRVQIVWTTGNKDRVRWDQDASGCFTTSSA 40
+ W + GW E + L D L+ V TG K+RV W +G F+ SA
Sbjct: 1304 DLWKDGIGWDLENIDPYLTEDKRLELLAVVPDHVTGAKERVAWKGTNNGSFSVKSA 1359
Score = 42.4 bits (98), Expect(2) = 7e-16
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = -3
Query: 617 KLHHVNWEIVMGPRSRG-LGTRRLQLANKVALAKLG*RMIK*SDNLWA*VLGKNYKGG 447
KLH V W+ V ++ G LG RR + NK +AK+G R++ +LWA V+ K Y G
Sbjct: 1172 KLHLVAWDKVCQQKNEGGLGIRRSKEMNKALIAKVGWRVMNNEQSLWAQVVRKKYSVG 1229
>ref|XP_009119466.1| PREDICTED: uncharacterized protein LOC103844431 [Brassica rapa]
Length = 1834
Score = 68.2 bits (165), Expect(2) = 9e-16
Identities = 35/124 (28%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Frame = -2
Query: 384 SYVWRSILEG-WKVLRRGLKWRIGTSKDIQFWNGTWLVEHPLREVCETEFPQEEMEKRVG 208
S WRSI+ G + + G W +G + ++FW WL++ PL+ + + P+E +E +
Sbjct: 1369 SPTWRSIILGVGECVVPGTCWILGDGRRVRFWKDNWLMQEPLQSLSTVDIPEELLEAKAR 1428
Query: 207 ECWCERRGWKREELGKSLNADLLGRLIRVQIVWTTGNKDRVRWDQDASGCFTTSSANNMM 28
+ W RGW + + ++ + L V I TG +DR+ W G F+ SA ++
Sbjct: 1429 DLWQSGRGWLIQCIEPYISMEHRLCLASVVIDDVTGARDRMSWGGSKDGLFSVKSAYALL 1488
Query: 27 LEEE 16
++E
Sbjct: 1489 TKDE 1492
Score = 42.4 bits (98), Expect(2) = 9e-16
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = -3
Query: 617 KLHHVNWEIVMGPRSRG-LGTRRLQLANKVALAKLG*RMIK*SDNLWA*VLGKNYKGG 447
K H V WE V PR G LG R + N LAKLG R++ D+LW +L K ++ G
Sbjct: 1297 KQHLVAWEKVCKPRREGGLGIRSAKEMNIALLAKLGWRVLNTHDDLWVQILRKKFRVG 1354
>gb|AID60103.1| hypothetical protein [Brassica napus]
Length = 620
Score = 65.9 bits (159), Expect(2) = 2e-15
Identities = 32/120 (26%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
Frame = -2
Query: 396 RSRKSYVWRSILEGWK-VLRRGLKWRIGTSKDIQFWNGTWLVEHPLREVCETEFPQEEME 220
+ R S WRS++ G + V+ G+ W +G + ++FW WL++ PL + + P+E +E
Sbjct: 151 QGRWSPTWRSLVMGIREVVAPGVSWILGDGRRVRFWRDRWLLKEPLEALSLIDIPEELVE 210
Query: 219 KRVGECWCERRGWKREELGKSLNADLLGRLIRVQIVWTTGNKDRVRWDQDASGCFTTSSA 40
+ + W + GW +++ + +L + I TG +DR+ W + G F+ +A
Sbjct: 211 AKTRDLWQQGIGWILQQIEPYTSLQNRLQLASLVIDEVTGARDRMSWGEAKDGLFSVKAA 270
Score = 43.9 bits (102), Expect(2) = 2e-15
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = -3
Query: 617 KLHHVNWEIVMGP-RSRGLGTRRLQLANKVALAKLG*RMIK*SDNLWA*VLGKNYKGG 447
K H V+WE + P R GLG R + N LAKLG RM+ D LW +L K ++ G
Sbjct: 83 KQHLVSWEKICKPKREGGLGIRLAKEMNVALLAKLGWRMLNTEDGLWVNILCKKFRVG 140
>ref|XP_009123770.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 532
Score = 68.9 bits (167), Expect(2) = 2e-15
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Frame = -2
Query: 393 SRKSYVWRSILEGWK-VLRRGLKWRIGTSKDIQFWNGTWLVEHPLREVCETEFPQEEMEK 217
S S W+S++ G + V+ G W G ++I+FW +W+ PL P+ +
Sbjct: 95 SSSSSTWKSVVMGIREVVLVGHSWITGNGRNIRFWTDSWIAGQPLMTEVIAGLPEGYEDI 154
Query: 216 RVGECWCERRGWKREELGKSLNADLLGRLIRVQIVWTTGNKDRVRWDQDASGCFTTSSAN 37
V + W E GW + + + A+ L+ V + TG KDR+ W Q +G FT SA
Sbjct: 155 TVRDMWGEGGGWDFDRITPFVTAERRLELMAVVVDTVTGAKDRLAWGQTPNGQFTVKSAY 214
Query: 36 NMMLEEE 16
++ +E
Sbjct: 215 TLLTRDE 221
Score = 40.4 bits (93), Expect(2) = 2e-15
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = -3
Query: 611 HHVNWEIVMGPR-SRGLGTRRLQLANKVALAKLG*RMIK*SDNLWA*VLGKNYKGG 447
H V+W+ + P+ S GLG R + NK LAK+G R++ +++LWA VL Y G
Sbjct: 28 HLVSWDKICKPKASGGLGIRVSRDMNKALLAKVGWRLLHDTESLWANVLRSKYGVG 83
>ref|XP_013710279.1| PREDICTED: uncharacterized protein LOC106414114 [Brassica napus]
Length = 1895
Score = 65.9 bits (159), Expect(2) = 3e-15
Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Frame = -2
Query: 384 SYVWRSILEGWK-VLRRGLKWRIGTSKDIQFWNGTWLVEHPLREVCETEFPQEEMEKRVG 208
S WRSI G + V+ G +W +G + ++FW WL++ PL+ + P+ +E R
Sbjct: 1430 SPTWRSIAVGIRDVIVPGTRWILGNGRRVRFWKDKWLLDEPLQNLSMVHIPELILEARAR 1489
Query: 207 ECWCERRGWKREELGKSLNADLLGRLIRVQIVWTTGNKDRVRWDQDASGCFTTSSA 40
+ W GW + + + RL + I TG +DR+ W + G F+ SA
Sbjct: 1490 DLWQNGTGWVTQVIEPYTSIHDRLRLAAMVIDDVTGARDRMSWGESKDGLFSVKSA 1545
Score = 43.1 bits (100), Expect(2) = 3e-15
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = -3
Query: 617 KLHHVNWEIVMGP-RSRGLGTRRLQLANKVALAKLG*RMIK*SDNLWA*VLGKNYKGG 447
K H V+W+++ P R GLG R + N LAKLG R++ D LW +L K ++ G
Sbjct: 1358 KQHLVSWDVICKPKREGGLGIRLAKEMNIALLAKLGWRLLNTEDALWVKILRKKFRVG 1415
>ref|XP_009101981.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
Length = 1235
Score = 68.6 bits (166), Expect(2) = 3e-15
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Frame = -2
Query: 396 RSRKSYVWRSILEGWK-VLRRGLKWRIGTSKDIQFWNGTWLVEHPLREVCETEFPQEEME 220
R S WRS++ G + V+ G W +G + ++FW WL++ PL E+ + P+E +E
Sbjct: 766 RGNWSPTWRSLILGIREVVVPGTCWILGDGRRVRFWRDNWLLDQPLYELSTADIPEEIIE 825
Query: 219 KRVGECWCERRGWKREELGKSLNADLLGRLIRVQIVWTTGNKDRVRWDQDASGCFTTSSA 40
+ + W GW + + ++ RL V I TG +DR+ W G F+ SA
Sbjct: 826 AKARDLWQHGTGWLTQLMEPYMSTHNSLRLASVVIDEVTGARDRMSWSGSNDGQFSVKSA 885
Score = 40.4 bits (93), Expect(2) = 3e-15
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = -3
Query: 617 KLHHVNWEIVMGP-RSRGLGTRRLQLANKVALAKLG*RMIK*SDNLWA*VLGKNYKGG 447
K H + WE + P R GLG R+ + N L KLG R++ D LW +L K ++ G
Sbjct: 698 KQHLIAWEKICTPKREGGLGIRKAKEMNVALLGKLGWRLLNTHDALWVRILQKKFRVG 755
>ref|XP_009126860.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103851737
[Brassica rapa]
Length = 1638
Score = 64.7 bits (156), Expect(2) = 3e-15
Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 1/120 (0%)
Frame = -2
Query: 396 RSRKSYVWRSILEGWK-VLRRGLKWRIGTSKDIQFWNGTWLVEHPLREVCETEFPQEEME 220
+ R S WRS++ G + V+ G+ W +G + ++FW WL++ PL + + P+E E
Sbjct: 1329 QGRWSPTWRSLVMGIREVVAPGVSWILGDGRRVRFWRDRWLLKEPLEALSLIDIPEELEE 1388
Query: 219 KRVGECWCERRGWKREELGKSLNADLLGRLIRVQIVWTTGNKDRVRWDQDASGCFTTSSA 40
+ + W + GW +++ + +L + I TG +DR+ W + G F+ +A
Sbjct: 1389 AKTRDLWQQGIGWILQQIEPYTSLQNRLQLASLVIDEVTGARDRMSWGEAKDGLFSVKAA 1448
Score = 43.9 bits (102), Expect(2) = 3e-15
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = -3
Query: 617 KLHHVNWEIVMGP-RSRGLGTRRLQLANKVALAKLG*RMIK*SDNLWA*VLGKNYKGG 447
K H V+WE + P R GLG R + N LAKLG RM+ D LW +L K ++ G
Sbjct: 1261 KQHLVSWEKICKPKREGGLGIRLAKEMNVALLAKLGWRMLNTEDGLWVNILCKKFRVG 1318
>ref|XP_013659474.1| PREDICTED: uncharacterized protein LOC106364439 [Brassica napus]
Length = 964
Score = 66.6 bits (161), Expect(2) = 8e-14
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Frame = -2
Query: 393 SRKSYVWRSILEGWK-VLRRGLKWRIGTSKDIQFWNGTWLVEHPLREVCETEFPQEEMEK 217
S S W+S++ G + V+ G W G ++I+FW +W+ PL P+
Sbjct: 692 SSSSSTWKSVVMGIREVVLVGHSWITGNGRNIRFWTDSWIAGQPLMTEVIAGLPEGYEGI 751
Query: 216 RVGECWCERRGWKREELGKSLNADLLGRLIRVQIVWTTGNKDRVRWDQDASGCFTTSSAN 37
V + W E GW + + A+ L+ V + TG KDR+ W Q +G FT SA
Sbjct: 752 TVRDMWGEGGGWDFNRITPFVTAERRLELMAVVVDTVTGAKDRLAWGQTPNGQFTVKSAY 811
Query: 36 NMMLEEE 16
++ +E
Sbjct: 812 TLLTRDE 818
Score = 37.4 bits (85), Expect(2) = 8e-14
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = -3
Query: 611 HHVNWEIVMGPR-SRGLGTRRLQLANKVALAKLG*RMIK*SDNLWA*VLGKNYKGG 447
H V+W+ + P+ S GLG R + N LAK+G R++ +++LWA VL Y G
Sbjct: 625 HLVSWDKICKPKASGGLGIRVSRDMNIALLAKVGWRLLHDTESLWAKVLRSKYGVG 680
>ref|XP_009151561.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
Length = 1204
Score = 62.8 bits (151), Expect(2) = 2e-13
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
Frame = -2
Query: 393 SRKSYVWRSILEGWK-VLRRGLKWRIGTSKDIQFWNGTWLVEHPLREVCETEFPQEEMEK 217
S S WRS++ G + V+ +G W IG ++I+FW WL PL + P+
Sbjct: 736 SNVSSTWRSVVMGIREVVAKGHSWVIGNGREIKFWTDKWLSRQPLMGEVLGDLPEGYENI 795
Query: 216 RVGECWCERRGWKREELGKSLNADLLGRLIRVQIVWTT--GNKDRVRWDQDASGCFTTSS 43
E W + GW + + + RL RV +V T G KDR+ W + +G FT +
Sbjct: 796 TARELWLDGGGWDLSRISPYIPDE--RRLERVAVVVDTVSGVKDRLAWGEVPNGQFTVKT 853
Query: 42 ANNMMLEE 19
A +++ +
Sbjct: 854 AYDLITRD 861
Score = 39.7 bits (91), Expect(2) = 2e-13
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = -3
Query: 611 HHVNWEIVMGPRSRG-LGTRRLQLANKVALAKLG*RMIK*SDNLWA*VLGKNYKGG 447
H ++W+ V P++ G LG R + NK LAK+G R++ + LWA VL Y G
Sbjct: 669 HLISWDRVCRPKADGGLGIRVSRDMNKALLAKVGWRLLNDKEGLWARVLRSKYSVG 724
>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 732
Score = 56.6 bits (135), Expect(2) = 3e-13
Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 1/129 (0%)
Frame = -2
Query: 396 RSRKSYVWRSILEGWK-VLRRGLKWRIGTSKDIQFWNGTWLVEHPLREVCETEFPQEEME 220
RS S WRS+ G + V+ GL W IG ++I FW WL PL E+ E P
Sbjct: 428 RSVCSSTWRSVALGMREVVIPGLSWVIGDGREILFWMDKWLTNIPLAELLVQEPPAGWKG 487
Query: 219 KRVGECWCERRGWKREELGKSLNADLLGRLIRVQIVWTTGNKDRVRWDQDASGCFTTSSA 40
R + GW + +++ +L + TG +DR+ W + G F S+
Sbjct: 488 MRARDLRRNGIGWDMATIAPYISSYNRLQLQSFVLDDITGARDRISWGESQDGRFKVSTT 547
Query: 39 NNMMLEEEA 13
+ + +EA
Sbjct: 548 YSFLTRDEA 556
Score = 45.4 bits (106), Expect(2) = 3e-13
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = -3
Query: 617 KLHHVNWEIVMGPRSRG-LGTRRLQLANKVALAKLG*RMIK*SDNLWA*VLGKNYK 453
K H ++W+ V PRS G LG R+ Q NK L+K+G R+I+ +LWA ++ NY+
Sbjct: 360 KQHLISWKRVCKPRSEGGLGIRKAQDMNKALLSKVGWRLIQDYHSLWARIMRCNYR 415
>ref|XP_009344908.1| PREDICTED: uncharacterized protein LOC103936764 [Pyrus x
bretschneideri]
Length = 1365
Score = 60.8 bits (146), Expect(2) = 1e-12
Identities = 31/115 (26%), Positives = 52/115 (45%)
Frame = -2
Query: 384 SYVWRSILEGWKVLRRGLKWRIGTSKDIQFWNGTWLVEHPLREVCETEFPQEEMEKRVGE 205
S+ WR IL G +++ G++WR+G+ I FW WL L + +E V +
Sbjct: 906 SHTWRGILFGAQIIPNGMRWRVGSGSQIHFWKDNWLESGVLENFATIPLSADMLEWSVDD 965
Query: 204 CWCERRGWKREELGKSLNADLLGRLIRVQIVWTTGNKDRVRWDQDASGCFTTSSA 40
+ GW E L L D++ + + + +D+V W SG F+ +A
Sbjct: 966 -FLTDDGWNVELLYSCLPPDIVEHIFSLHVGIANHREDKVIWSLTNSGTFSVKTA 1019
Score = 39.3 bits (90), Expect(2) = 1e-12
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = -3
Query: 617 KLHHVNWEIVMGPRSRG-LGTRRLQLANKVALAKLG*RMIK*SDNLWA*VLGKNY 456
K+H V WE V P+S G LG + N+ LAK G ++++ LWA VL Y
Sbjct: 834 KVHLVKWETVSTPKSMGGLGLKDTHAMNQALLAKTGWKLMQRDPGLWAQVLKGKY 888
>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
Length = 799
Score = 68.2 bits (165), Expect(2) = 1e-12
Identities = 41/125 (32%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Frame = -2
Query: 387 KSYVW-RSILEGWK-VLRRGLKWRIGTSKDIQFWNGTWLVEHPLREVCETEFPQEEMEKR 214
KS +W R I+ G + V+ G+ W +G + +FW WL+ PLRE P E R
Sbjct: 332 KSSLWARVIMLGMREVVIPGVSWVVGDGQTTRFWADKWLMNTPLREDIIGPAPVGLEEAR 391
Query: 213 VGECWCERRGWKREELGKSLNADLLGRLIRVQIVWTTGNKDRVRWDQDASGCFTTSSANN 34
V + W RGW E + + D+ RL V + TG +DR+ W + G FT SA +
Sbjct: 392 VCDLWQHGRGWLLENIAPYVAPDIRLRLKAVVVDNITGVRDRLSWGESLDGKFTVKSAYS 451
Query: 33 MMLEE 19
++++
Sbjct: 452 SLMKD 456
Score = 32.0 bits (71), Expect(2) = 1e-12
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = -3
Query: 617 KLHHVNW-EIVMGPRSRGLGTRRLQLANKVALAKLG*RMIK*SDNLWA*VL 468
K H + W +I ++ GLG R + N LAK+G R+++ +LWA V+
Sbjct: 290 KQHLLAWNKIYCTKQAGGLGIRSSRAMNTALLAKIGWRLLQDKSSLWARVI 340
>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1378
Score = 61.6 bits (148), Expect(2) = 1e-12
Identities = 37/136 (27%), Positives = 56/136 (41%)
Frame = -2
Query: 408 MQRERSRKSYVWRSILEGWKVLRRGLKWRIGTSKDIQFWNGTWLVEHPLREVCETEFPQE 229
M +E+S S WR IL V+R+G+ +G FW+ W PL + P E
Sbjct: 904 MFKEKSNASSTWRGILSSIDVVRKGINSAVGNGAKTLFWHHRWATSEPLISLASPIPPIE 963
Query: 228 EMEKRVGECWCERRGWKREELGKSLNADLLGRLIRVQIVWTTGNKDRVRWDQDASGCFTT 49
+ V E W GWK + L L + +++ D + W+ SG FT
Sbjct: 964 LQDATVKEMWDLVSGWKVDVFANYLPEATLKLIAAHELIDDEEAIDDIYWNGSPSGGFTI 1023
Query: 48 SSANNMMLEEEAVGIE 1
SA N+ E ++
Sbjct: 1024 GSAMNITRNAELANMD 1039
Score = 38.1 bits (87), Expect(2) = 1e-12
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = -3
Query: 617 KLHHVNWE-IVMGPRSRGLGTRRLQLANKVALAKLG*RMIK*SDNLWA*VLGKNYKGGIR 441
++H V WE I + GLG R ++ AN L KLG R++ +LW+ +L Y
Sbjct: 841 RVHLVAWENISKSKKEGGLGIRSMRQANSAFLVKLGWRLLAEPSSLWSRILRAKY----- 895
Query: 440 CGNR 429
C NR
Sbjct: 896 CDNR 899
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 61.6 bits (148), Expect(2) = 1e-12
Identities = 34/128 (26%), Positives = 60/128 (46%)
Frame = -2
Query: 411 HMQRERSRKSYVWRSILEGWKVLRRGLKWRIGTSKDIQFWNGTWLVEHPLREVCETEFPQ 232
H+Q + S S+ WRSI++G VL +KW +G + I FWN W+ + PL +
Sbjct: 901 HLQSQ-SNCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFWNDWWVGDGPLASNTDCINQP 959
Query: 231 EEMEKRVGECWCERRGWKREELGKSLNADLLGRLIRVQIVWTTGNKDRVRWDQDASGCFT 52
+ +V + +R W L L +++ + I + +D + W +G T
Sbjct: 960 HMTDIKVEDLITSQRRWDTGALHNILPTNMIDMVRATPIAINSEQEDFLSWPHSTTGMVT 1019
Query: 51 TSSANNMM 28
SSA +++
Sbjct: 1020 VSSAYSLI 1027
Score = 38.1 bits (87), Expect(2) = 1e-12
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -3
Query: 617 KLHHVNWEIVMGPRSRG-LGTRRLQLANKVALAKLG*RMIK*SDNLWA*VLGKNY 456
KLH VNW + PR+ G LG R + N+ L K+ ++ D LW VL + Y
Sbjct: 839 KLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKY 893
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 61.6 bits (148), Expect(2) = 1e-12
Identities = 34/128 (26%), Positives = 60/128 (46%)
Frame = -2
Query: 411 HMQRERSRKSYVWRSILEGWKVLRRGLKWRIGTSKDIQFWNGTWLVEHPLREVCETEFPQ 232
H+Q + S S+ WRSI++G VL +KW +G + I FWN W+ + PL +
Sbjct: 901 HLQSQ-SNCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFWNDWWVGDGPLASNTDCINQP 959
Query: 231 EEMEKRVGECWCERRGWKREELGKSLNADLLGRLIRVQIVWTTGNKDRVRWDQDASGCFT 52
+ +V + +R W L L +++ + I + +D + W +G T
Sbjct: 960 HMTDIKVEDLITSQRRWDTGALHNILPTNMIDMVRATPIAINSEQEDFLSWPHSTTGMVT 1019
Query: 51 TSSANNMM 28
SSA +++
Sbjct: 1020 VSSAYSLI 1027
Score = 38.1 bits (87), Expect(2) = 1e-12
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -3
Query: 617 KLHHVNWEIVMGPRSRG-LGTRRLQLANKVALAKLG*RMIK*SDNLWA*VLGKNY 456
KLH VNW + PR+ G LG R + N+ L K+ ++ D LW VL + Y
Sbjct: 839 KLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKY 893