BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00022797
         (1249 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP18255.1| unnamed protein product [Coffea canephora]            593   e-166
ref|XP_011087492.1| PREDICTED: RNA polymerase II-associated prot...   420   e-114
ref|XP_011087491.1| PREDICTED: RNA polymerase II-associated prot...   413   e-112
ref|XP_012840399.1| PREDICTED: RNA polymerase II-associated prot...   394   e-107
ref|XP_012840398.1| PREDICTED: RNA polymerase II-associated prot...   393   e-106
ref|XP_009611909.1| PREDICTED: RNA polymerase II-associated prot...   387   e-105
emb|CBI39598.3| unnamed protein product [Vitis vinifera]              384   e-104
ref|XP_010659703.1| PREDICTED: RNA polymerase II-associated prot...   383   e-103
ref|XP_009767310.1| PREDICTED: RNA polymerase II-associated prot...   383   e-103
ref|XP_002277910.2| PREDICTED: RNA polymerase II-associated prot...   383   e-103
ref|XP_009611910.1| PREDICTED: RNA polymerase II-associated prot...   381   e-103
ref|XP_009767318.1| PREDICTED: RNA polymerase II-associated prot...   377   e-101
ref|XP_011038926.1| PREDICTED: RNA polymerase II-associated prot...   372   e-100
ref|XP_011038924.1| PREDICTED: RNA polymerase II-associated prot...   371   e-100
ref|XP_011023785.1| PREDICTED: RNA polymerase II-associated prot...   371   e-100
ref|XP_009767301.1| PREDICTED: RNA polymerase II-associated prot...   371   e-100
ref|XP_011038925.1| PREDICTED: RNA polymerase II-associated prot...   370   1e-99
ref|XP_011023786.1| PREDICTED: RNA polymerase II-associated prot...   370   1e-99
gb|EYU34893.1| hypothetical protein MIMGU_mgv1a005743mg [Erythra...   369   4e-99
ref|XP_006382393.1| hypothetical protein POPTR_0005s01710g [Popu...   367   1e-98

>emb|CDP18255.1| unnamed protein product [Coffea canephora]
          Length = 466

 Score =  593 bits (1529), Expect = e-166
 Identities = 318/398 (79%), Positives = 331/398 (83%)
 Frame = -1

Query: 1195 MSRVPSKHSRDQAQDFEGLLNNLQDWELSFKDKDKKRKSQSPGKEKADLLAQRQSVENAN 1016
            MSRVPSKHSRDQAQDFEGLLNNLQDWELSFKDKDKK KSQS GKEKADLLAQR +V NAN
Sbjct: 1    MSRVPSKHSRDQAQDFEGLLNNLQDWELSFKDKDKKLKSQSRGKEKADLLAQRHNVANAN 60

Query: 1015 QLSNSSRVDDRRAVGKNAYEDSGGAAKKYDYLRNYDAIRQLSRGFTTEESSVDANSEKEL 836
            QLS+SSRV +R AV KNA ED G AAKKYDYLRNYDA+RQLS  F TEESSVDANSEKEL
Sbjct: 61   QLSSSSRVGERHAVEKNANEDIGDAAKKYDYLRNYDAMRQLSSSFMTEESSVDANSEKEL 120

Query: 835  GNEYFKQKKFNEAIDCYSRSIALLPTAVAYANRAMAYIKIKRFQEAENDCTEALNLDDRY 656
            GNEYFK KKFNEAIDCYSRSIAL                   F+EAE+DCTEALNLDDRY
Sbjct: 121  GNEYFKHKKFNEAIDCYSRSIAL-------------------FEEAESDCTEALNLDDRY 161

Query: 655  IKAYSRRSTARKELGKLKEAYDDAEFALRLEPQNQEIKKQYAEAKSLLDKEILKKVSRAS 476
            IKAYSRRSTARKELGKLKEAYDDAEFALRLEPQNQEIKKQYAEAKSLLDKEILKKVSRAS
Sbjct: 162  IKAYSRRSTARKELGKLKEAYDDAEFALRLEPQNQEIKKQYAEAKSLLDKEILKKVSRAS 221

Query: 475  TSSVQGLQKAQKSKVEINKAVNEFEPASSNFTSGMVTEVQDDHRKGNNGEIPLKTAMQVD 296
            TSSVQGLQKA KSKVE NKAVN  +P SS+F SGMV EVQDDH KGNNGEIPLKTAM++D
Sbjct: 222  TSSVQGLQKAGKSKVETNKAVNGVKPVSSDFNSGMVAEVQDDHTKGNNGEIPLKTAMRLD 281

Query: 295  GGTGMKTKGQNGNASHESALQNTALEKTKRSSINGEHELKTSXXXXXXXXXXXXXXXXXX 116
             GT MK+K QNGNASHESALQNTALE TKRSS NG+HELKTS                  
Sbjct: 282  -GTSMKSKDQNGNASHESALQNTALETTKRSSTNGKHELKTSVQELAARAATLAKAEAAK 340

Query: 115  XXAPPNSAYEFEVSWRGLSGDCSLQAQLLKATPPTSLP 2
              APPNSAY+FEVSWRGLSGD SLQAQLLKATPPTSLP
Sbjct: 341  IIAPPNSAYQFEVSWRGLSGDRSLQAQLLKATPPTSLP 378


>ref|XP_011087492.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2 [Sesamum
            indicum]
          Length = 470

 Score =  420 bits (1079), Expect = e-114
 Identities = 234/403 (58%), Positives = 283/403 (70%), Gaps = 5/403 (1%)
 Frame = -1

Query: 1195 MSRVPSKHSRDQAQDFEGLLNNLQDWELSFKDKDKKRKSQSPGKEKADLLAQRQSVENAN 1016
            M+RVPSKHSRDQAQDFEGLLNNLQDWELSFKDKDKK +S    + K DLL Q      A+
Sbjct: 1    MARVPSKHSRDQAQDFEGLLNNLQDWELSFKDKDKKLRSDGVSEGKLDLLGQ------AS 54

Query: 1015 QLSNSSRVDDRRAVGKNAYEDSGGAAKKYDYLRNYDAIRQLSRGFTTEESSVDANSEKEL 836
            + + S+RV+ ++ + K+   D+  A ++YDYL  Y+A+ +LS G  ++ES VDANSEKEL
Sbjct: 55   RSTASARVNGKQTMEKSPSSDNTSAVRQYDYLTEYEALSRLSGGIQSQESFVDANSEKEL 114

Query: 835  GNEYFKQKKFNEAIDCYSRSIALLPTAVAYANRAMAYIKIKRFQEAENDCTEALNLDDRY 656
            GNE+FKQKKF +AIDCYSRSIAL PTAVAYANRAMAYIK+KRFQEAENDCTEALNLDDRY
Sbjct: 115  GNEFFKQKKFVDAIDCYSRSIALSPTAVAYANRAMAYIKLKRFQEAENDCTEALNLDDRY 174

Query: 655  IKAYSRRSTARKELGKLKEAYDDAEFALRLEPQNQEIKKQYAEAKSLLDKEILKKVSRAS 476
            IKAYSRRSTARKELGKLKE+ DDAEFALRLEPQNQEIKKQYAE KSLL KEILKK S   
Sbjct: 175  IKAYSRRSTARKELGKLKESIDDAEFALRLEPQNQEIKKQYAELKSLLQKEILKKASGGL 234

Query: 475  TSSVQGLQKAQKSKVEINKAVNEFEPASSNFTSGMVTEVQDDHRKGNN-GEIPLKTAMQV 299
              SV+G Q   K +V+ NK V + +  S++   G V E+ ++H +GNN  ++  +T+M+V
Sbjct: 235  AGSVRGAQPG-KPEVDKNKNVQKLQAVSTSSPEGRVAEILEEHPEGNNIRDVAAETSMEV 293

Query: 298  D----GGTGMKTKGQNGNASHESALQNTALEKTKRSSINGEHELKTSXXXXXXXXXXXXX 131
            +      TG K    +G          TA +KTK    + + EL+ S             
Sbjct: 294  ETNNIRSTGFKPDTGSG----------TAKKKTK----DTKQELRASVQELAAKAASLAK 339

Query: 130  XXXXXXXAPPNSAYEFEVSWRGLSGDCSLQAQLLKATPPTSLP 2
                    PPNSAY+FEVSWRG SGD  LQA+LLK T PT+LP
Sbjct: 340  AEAAKNIVPPNSAYQFEVSWRGFSGDRDLQARLLKVTSPTALP 382


>ref|XP_011087491.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1 [Sesamum
            indicum]
          Length = 476

 Score =  413 bits (1062), Expect = e-112
 Identities = 234/409 (57%), Positives = 283/409 (69%), Gaps = 11/409 (2%)
 Frame = -1

Query: 1195 MSRVPSKHSRDQAQD------FEGLLNNLQDWELSFKDKDKKRKSQSPGKEKADLLAQRQ 1034
            M+RVPSKHSRDQAQD      FEGLLNNLQDWELSFKDKDKK +S    + K DLL Q  
Sbjct: 1    MARVPSKHSRDQAQDCLTGQDFEGLLNNLQDWELSFKDKDKKLRSDGVSEGKLDLLGQ-- 58

Query: 1033 SVENANQLSNSSRVDDRRAVGKNAYEDSGGAAKKYDYLRNYDAIRQLSRGFTTEESSVDA 854
                A++ + S+RV+ ++ + K+   D+  A ++YDYL  Y+A+ +LS G  ++ES VDA
Sbjct: 59   ----ASRSTASARVNGKQTMEKSPSSDNTSAVRQYDYLTEYEALSRLSGGIQSQESFVDA 114

Query: 853  NSEKELGNEYFKQKKFNEAIDCYSRSIALLPTAVAYANRAMAYIKIKRFQEAENDCTEAL 674
            NSEKELGNE+FKQKKF +AIDCYSRSIAL PTAVAYANRAMAYIK+KRFQEAENDCTEAL
Sbjct: 115  NSEKELGNEFFKQKKFVDAIDCYSRSIALSPTAVAYANRAMAYIKLKRFQEAENDCTEAL 174

Query: 673  NLDDRYIKAYSRRSTARKELGKLKEAYDDAEFALRLEPQNQEIKKQYAEAKSLLDKEILK 494
            NLDDRYIKAYSRRSTARKELGKLKE+ DDAEFALRLEPQNQEIKKQYAE KSLL KEILK
Sbjct: 175  NLDDRYIKAYSRRSTARKELGKLKESIDDAEFALRLEPQNQEIKKQYAELKSLLQKEILK 234

Query: 493  KVSRASTSSVQGLQKAQKSKVEINKAVNEFEPASSNFTSGMVTEVQDDHRKGNN-GEIPL 317
            K S     SV+G Q   K +V+ NK V + +  S++   G V E+ ++H +GNN  ++  
Sbjct: 235  KASGGLAGSVRGAQPG-KPEVDKNKNVQKLQAVSTSSPEGRVAEILEEHPEGNNIRDVAA 293

Query: 316  KTAMQVD----GGTGMKTKGQNGNASHESALQNTALEKTKRSSINGEHELKTSXXXXXXX 149
            +T+M+V+      TG K    +G          TA +KTK    + + EL+ S       
Sbjct: 294  ETSMEVETNNIRSTGFKPDTGSG----------TAKKKTK----DTKQELRASVQELAAK 339

Query: 148  XXXXXXXXXXXXXAPPNSAYEFEVSWRGLSGDCSLQAQLLKATPPTSLP 2
                          PPNSAY+FEVSWRG SGD  LQA+LLK T PT+LP
Sbjct: 340  AASLAKAEAAKNIVPPNSAYQFEVSWRGFSGDRDLQARLLKVTSPTALP 388


>ref|XP_012840399.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2
            [Erythranthe guttatus]
          Length = 469

 Score =  394 bits (1013), Expect = e-107
 Identities = 218/398 (54%), Positives = 272/398 (68%)
 Frame = -1

Query: 1195 MSRVPSKHSRDQAQDFEGLLNNLQDWELSFKDKDKKRKSQSPGKEKADLLAQRQSVENAN 1016
            M++ PSKHSRD  Q+ EGLLNNLQDWELSFK+KDKK +S + GK K      + S  N  
Sbjct: 1    MAKTPSKHSRDLPQELEGLLNNLQDWELSFKEKDKKMRSDAVGKAKLKDQLGQPSGNNVG 60

Query: 1015 QLSNSSRVDDRRAVGKNAYEDSGGAAKKYDYLRNYDAIRQLSRGFTTEESSVDANSEKEL 836
            +  +S++V  ++ + K    ++    K+YD+L+ Y+A+ +LS    + ES VDANSEKEL
Sbjct: 61   RPYDSAKVHRKQTMEKTPSYENPSTVKQYDHLKEYEALSRLSSAVPSTESFVDANSEKEL 120

Query: 835  GNEYFKQKKFNEAIDCYSRSIALLPTAVAYANRAMAYIKIKRFQEAENDCTEALNLDDRY 656
            GNE+FKQKKF EAIDCYSRSIAL P+AVAYANRAMAYIKI+RFQEAENDCTEALNLDDRY
Sbjct: 121  GNEFFKQKKFTEAIDCYSRSIALSPSAVAYANRAMAYIKIRRFQEAENDCTEALNLDDRY 180

Query: 655  IKAYSRRSTARKELGKLKEAYDDAEFALRLEPQNQEIKKQYAEAKSLLDKEILKKVSRAS 476
            IKAYSRRSTARKELGKLKE+ DDAEFALRLEPQNQEIKKQ+AE+KSLL+K ILKKVS A 
Sbjct: 181  IKAYSRRSTARKELGKLKESMDDAEFALRLEPQNQEIKKQFAESKSLLEKAILKKVSGAL 240

Query: 475  TSSVQGLQKAQKSKVEINKAVNEFEPASSNFTSGMVTEVQDDHRKGNNGEIPLKTAMQVD 296
            T SV+G   AQ  K E++K  N  +P      SG VTE+ +++ KGN        + +V 
Sbjct: 241  TGSVEG---AQPGKSEVDKNNNVQKP-----LSGRVTEILEENPKGNK-------SREVT 285

Query: 295  GGTGMKTKGQNGNASHESALQNTALEKTKRSSINGEHELKTSXXXXXXXXXXXXXXXXXX 116
              T M+ K  +  ++    + ++   KTK    NG+ +LK S                  
Sbjct: 286  ADTSMEIKQNSVRSNGSDVITDSETAKTKPK--NGKQQLKASVQELAAKAANLAKAEAAK 343

Query: 115  XXAPPNSAYEFEVSWRGLSGDCSLQAQLLKATPPTSLP 2
               PPNSAY+FEVSWRGLS D +LQ +LL+ T P +LP
Sbjct: 344  NIVPPNSAYQFEVSWRGLSNDRNLQTRLLQVTSPAALP 381


>ref|XP_012840398.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1
            [Erythranthe guttatus] gi|604329640|gb|EYU34894.1|
            hypothetical protein MIMGU_mgv1a005743mg [Erythranthe
            guttata]
          Length = 472

 Score =  393 bits (1009), Expect = e-106
 Identities = 220/399 (55%), Positives = 276/399 (69%), Gaps = 1/399 (0%)
 Frame = -1

Query: 1195 MSRVPSKHSRDQAQDFEGLLNNLQDWELSFKDKDKKRKSQSPGKEKADLLAQRQSVENAN 1016
            M++ PSKHSRD  Q+ EGLLNNLQDWELSFK+KDKK +S + GK K      + S  N  
Sbjct: 1    MAKTPSKHSRDLPQELEGLLNNLQDWELSFKEKDKKMRSDAVGKAKLKDQLGQPSGNNVG 60

Query: 1015 QLSNSSRVDDRRAVGKNAYEDSGGAAKKYDYLRNYDAIRQLSRGFTTEESSVDANSEKEL 836
            +  +S++V  ++ + K    ++    K+YD+L+ Y+A+ +LS    + ES VDANSEKEL
Sbjct: 61   RPYDSAKVHRKQTMEKTPSYENPSTVKQYDHLKEYEALSRLSSAVPSTESFVDANSEKEL 120

Query: 835  GNEYFKQKKFNEAIDCYSRSIALLPTAVAYANRAMAYIKIKRFQEAENDCTEALNLDDRY 656
            GNE+FKQKKF EAIDCYSRSIAL P+AVAYANRAMAYIKI+RFQEAENDCTEALNLDDRY
Sbjct: 121  GNEFFKQKKFTEAIDCYSRSIALSPSAVAYANRAMAYIKIRRFQEAENDCTEALNLDDRY 180

Query: 655  IKAYSRRSTARKELGKLKEAYDDAEFALRLEPQNQEIKKQYAEAKSLLDKEILKKVSRAS 476
            IKAYSRRSTARKELGKLKE+ DDAEFALRLEPQNQEIKKQ+AE+KSLL+K ILKKVS A 
Sbjct: 181  IKAYSRRSTARKELGKLKESMDDAEFALRLEPQNQEIKKQFAESKSLLEKAILKKVSGAL 240

Query: 475  TSSVQGLQKAQKSKVEINKAVNEFEPASSNFTSGMVTEVQDDHRKGNNG-EIPLKTAMQV 299
            T SV+G   AQ  K E++K  N  +P      SG VTE+ +++ KGN   E+   T+M++
Sbjct: 241  TGSVEG---AQPGKSEVDKNNNVQKP-----LSGRVTEILEENPKGNKSREVTADTSMEI 292

Query: 298  DGGTGMKTKGQNGNASHESALQNTALEKTKRSSINGEHELKTSXXXXXXXXXXXXXXXXX 119
               + +++ G +     E+A     L +TK    NG+ +LK S                 
Sbjct: 293  KQNS-VRSNGSDVITDSETA----KLSQTKPK--NGKQQLKASVQELAAKAANLAKAEAA 345

Query: 118  XXXAPPNSAYEFEVSWRGLSGDCSLQAQLLKATPPTSLP 2
                PPNSAY+FEVSWRGLS D +LQ +LL+ T P +LP
Sbjct: 346  KNIVPPNSAYQFEVSWRGLSNDRNLQTRLLQVTSPAALP 384


>ref|XP_009611909.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1
            [Nicotiana tomentosiformis]
          Length = 465

 Score =  387 bits (995), Expect = e-105
 Identities = 227/398 (57%), Positives = 267/398 (67%)
 Frame = -1

Query: 1195 MSRVPSKHSRDQAQDFEGLLNNLQDWELSFKDKDKKRKSQSPGKEKADLLAQRQSVENAN 1016
            M+RVPSKHSRDQ QD +GLLN LQDWELS KDKDKK KSQ+ GKEK      R+   + +
Sbjct: 1    MARVPSKHSRDQFQDMQGLLNTLQDWELSLKDKDKKMKSQARGKEKL-----REDWSHTS 55

Query: 1015 QLSNSSRVDDRRAVGKNAYEDSGGAAKKYDYLRNYDAIRQLSRGFTTEESSVDANSEKEL 836
            +L    +V   + VGK+    S  AA  YDY + Y+    LS    +EES++DANSEKEL
Sbjct: 56   ELPTGPQVTGTQRVGKSTSISS--AAGPYDYSKKYNPTSHLSSEMLSEESNIDANSEKEL 113

Query: 835  GNEYFKQKKFNEAIDCYSRSIALLPTAVAYANRAMAYIKIKRFQEAENDCTEALNLDDRY 656
            GNE+FKQKKF EAI CYSRSIAL PTAVAYANRAMAY+KIKRFQEAENDCTEALNLDDRY
Sbjct: 114  GNEFFKQKKFKEAIICYSRSIALSPTAVAYANRAMAYLKIKRFQEAENDCTEALNLDDRY 173

Query: 655  IKAYSRRSTARKELGKLKEAYDDAEFALRLEPQNQEIKKQYAEAKSLLDKEILKKVSRAS 476
            IKAYSRRSTARKELGKLKE+ +DAEFA RLEPQNQEIKKQY E K+L +KEILK+VS A+
Sbjct: 174  IKAYSRRSTARKELGKLKESIEDAEFASRLEPQNQEIKKQYGEVKALYEKEILKRVSAAT 233

Query: 475  TSSVQGLQKAQKSKVEINKAVNEFEPASSNFTSGMVTEVQDDHRKGNNGEIPLKTAMQVD 296
              S QG QK  K+    NK     +  S   +S  V EV+    K NN ++P  TAM+V+
Sbjct: 234  GVSAQGAQKTGKT----NKTGPVIQSVSG--SSQKVAEVRKIPAKENNRDVP-GTAMEVE 286

Query: 295  GGTGMKTKGQNGNASHESALQNTALEKTKRSSINGEHELKTSXXXXXXXXXXXXXXXXXX 116
              T M+   ++ +AS      N A    KR+  N + ELK S                  
Sbjct: 287  -DTHMQINSKDSDASATVPTLNPA----KRTHKNSKQELKESVQELAARAASLAKAEAAK 341

Query: 115  XXAPPNSAYEFEVSWRGLSGDCSLQAQLLKATPPTSLP 2
              APPNSAY+FEVSWRGLSGD +LQ  LLK T P +LP
Sbjct: 342  NIAPPNSAYQFEVSWRGLSGDRNLQTHLLKVTSPATLP 379


>emb|CBI39598.3| unnamed protein product [Vitis vinifera]
          Length = 1097

 Score =  384 bits (987), Expect = e-104
 Identities = 226/432 (52%), Positives = 279/432 (64%), Gaps = 18/432 (4%)
 Frame = -1

Query: 1243 TAPSFSSLTACPLFP--------------VMSRVPSKHSRDQAQDFEGLLNNLQDWELSF 1106
            T P  +S+ A P  P              + +R PSKH+RDQA DF+G L +LQDWELS 
Sbjct: 595  TLPLSASIKALPSLPPIVEGRRRCWRSVSMATRFPSKHARDQALDFQGFLTDLQDWELSL 654

Query: 1105 KDKDKKRKSQSPGKEKADLLAQRQSVENANQLSNSSRVDDRRAVGKNAYEDSGGAAKKYD 926
            K+KDKK K+Q+   E+ D+   R +V+++++LS+S  V  R          S    ++++
Sbjct: 655  KEKDKKMKAQA---EEKDVPTARGNVKHSSKLSSSPGVSLRLG-------QSRSDTRQHE 704

Query: 925  YLRNYDAIRQLSRGFTTEESSVDANSEKELGNEYFKQKKFNEAIDCYSRSIALLPTAVAY 746
            Y RN+DAI ++S  F TEES  DA SEKELGNEYFKQ+KF EAIDCYSRSIALLPTAVAY
Sbjct: 705  YSRNHDAISRISSSFMTEESLPDAASEKELGNEYFKQRKFKEAIDCYSRSIALLPTAVAY 764

Query: 745  ANRAMAYIKIKRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLKEAYDDAEFALRL 566
            ANRAMAYIKIKRF+EAE+DC EALNLDDRYIKAYSRR+TARKELGK KEA +DAEFALRL
Sbjct: 765  ANRAMAYIKIKRFREAEDDCMEALNLDDRYIKAYSRRATARKELGKFKEATEDAEFALRL 824

Query: 565  EPQNQEIKKQYAEAKSLLDKEILKKVSRASTSSVQGLQKAQKSKVEINKAVNEFEPASSN 386
            EPQNQEIKKQYAEAKSL +KEIL+K S A  SSVQGLQK  KS VE+N         SS+
Sbjct: 825  EPQNQEIKKQYAEAKSLYEKEILQKASGALKSSVQGLQKVGKSVVEVNADTQGVRSISSS 884

Query: 385  FTSGMVTEVQDDHRKGNNGEIPLKTAMQVD----GGTGMKTKGQNGNASHESALQNTALE 218
                    +QD         +P  T+  ++     GTG ++K +NG    E+A+QN+ LE
Sbjct: 885  SQGAGEAAIQDRFM------VPANTSTSMEETENKGTGNRSK-ENGYL--ENAVQNSGLE 935

Query: 217  KTKRSSINGEHELKTSXXXXXXXXXXXXXXXXXXXXAPPNSAYEFEVSWRGLSGDCSLQA 38
                +   G+ E+K+S                      PNSAY+FEVSWRGL GD +LQA
Sbjct: 936  DVMSNHKTGQREMKSSLQELASRAASRAMVEAAKNITAPNSAYQFEVSWRGLLGDHALQA 995

Query: 37   QLLKATPPTSLP 2
              LKA  P +LP
Sbjct: 996  SYLKAISPNALP 1007


>ref|XP_010659703.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2 [Vitis
            vinifera]
          Length = 425

 Score =  383 bits (984), Expect = e-103
 Identities = 220/401 (54%), Positives = 270/401 (67%), Gaps = 4/401 (0%)
 Frame = -1

Query: 1192 SRVPSKHSRDQAQDFEGLLNNLQDWELSFKDKDKKRKSQSPGKEKADLLAQRQSVENANQ 1013
            +R PSKH+RDQA DF+G L +LQDWELS K+KDKK K+Q+   E+ D+   R +V+++++
Sbjct: 3    TRFPSKHARDQALDFQGFLTDLQDWELSLKEKDKKMKAQA---EEKDVPTARGNVKHSSK 59

Query: 1012 LSNSSRVDDRRAVGKNAYEDSGGAAKKYDYLRNYDAIRQLSRGFTTEESSVDANSEKELG 833
            LS+S  V  R          S    ++++Y RN+DAI ++S  F TEES  DA SEKELG
Sbjct: 60   LSSSPGVSLRLG-------QSRSDTRQHEYSRNHDAISRISSSFMTEESLPDAASEKELG 112

Query: 832  NEYFKQKKFNEAIDCYSRSIALLPTAVAYANRAMAYIKIKRFQEAENDCTEALNLDDRYI 653
            NEYFKQ+KF EAIDCYSRSIALLPTAVAYANRAMAYIKIKRF+EAE+DC EALNLDDRYI
Sbjct: 113  NEYFKQRKFKEAIDCYSRSIALLPTAVAYANRAMAYIKIKRFREAEDDCMEALNLDDRYI 172

Query: 652  KAYSRRSTARKELGKLKEAYDDAEFALRLEPQNQEIKKQYAEAKSLLDKEILKKVSRAST 473
            KAYSRR+TARKELGK KEA +DAEFALRLEPQNQEIKKQYAEAKSL +KEIL+K S A  
Sbjct: 173  KAYSRRATARKELGKFKEATEDAEFALRLEPQNQEIKKQYAEAKSLYEKEILQKASGALK 232

Query: 472  SSVQGLQKAQKSKVEINKAVNEFEPASSNFTSGMVTEVQDDHRKGNNGEIPLKTAMQVD- 296
            SSVQGLQK  KS VE+N         SS+        +QD         +P  T+  ++ 
Sbjct: 233  SSVQGLQKVGKSVVEVNADTQGVRSISSSSQGAGEAAIQDRFM------VPANTSTSMEE 286

Query: 295  ---GGTGMKTKGQNGNASHESALQNTALEKTKRSSINGEHELKTSXXXXXXXXXXXXXXX 125
                GTG ++K +NG    E+A+QN+ LE    +   G+ E+K+S               
Sbjct: 287  TENKGTGNRSK-ENGYL--ENAVQNSGLEDVMSNHKTGQREMKSSLQELASRAASRAMVE 343

Query: 124  XXXXXAPPNSAYEFEVSWRGLSGDCSLQAQLLKATPPTSLP 2
                   PNSAY+FEVSWRGL GD +LQA  LKA  P +LP
Sbjct: 344  AAKNITAPNSAYQFEVSWRGLLGDHALQASYLKAISPNALP 384


>ref|XP_009767310.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2
            [Nicotiana sylvestris]
          Length = 464

 Score =  383 bits (984), Expect = e-103
 Identities = 223/398 (56%), Positives = 264/398 (66%)
 Frame = -1

Query: 1195 MSRVPSKHSRDQAQDFEGLLNNLQDWELSFKDKDKKRKSQSPGKEKADLLAQRQSVENAN 1016
            M+RVP KH+RDQ QD +GLLNNLQDWELS KDKDKK KSQ+ GKEK      R+   + +
Sbjct: 1    MARVPGKHTRDQFQDMQGLLNNLQDWELSLKDKDKKMKSQARGKEKL-----REDWSHTS 55

Query: 1015 QLSNSSRVDDRRAVGKNAYEDSGGAAKKYDYLRNYDAIRQLSRGFTTEESSVDANSEKEL 836
            +L    +V+  + VGK+      GAA  YDY + Y+    LS    +EES++DANSEKEL
Sbjct: 56   ELPTGPQVNGTQRVGKSTL--ISGAAGPYDYSKKYNPTSHLSSEMLSEESNIDANSEKEL 113

Query: 835  GNEYFKQKKFNEAIDCYSRSIALLPTAVAYANRAMAYIKIKRFQEAENDCTEALNLDDRY 656
            GNE+FKQKKF EAIDCYSRSIAL PTAVAYANRAMAY+K+KRFQEAENDCTEALNLDDRY
Sbjct: 114  GNEFFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLKRFQEAENDCTEALNLDDRY 173

Query: 655  IKAYSRRSTARKELGKLKEAYDDAEFALRLEPQNQEIKKQYAEAKSLLDKEILKKVSRAS 476
            IKAYSRRSTARKELGKLKE+ +DAEFA RLEPQNQEIKKQY E K+L +KEILK+VS A+
Sbjct: 174  IKAYSRRSTARKELGKLKESIEDAEFASRLEPQNQEIKKQYGEVKALYEKEILKRVSGAT 233

Query: 475  TSSVQGLQKAQKSKVEINKAVNEFEPASSNFTSGMVTEVQDDHRKGNNGEIPLKTAMQVD 296
              S QG Q   K+    NK     +   S   S  V EV+    K ++ ++P  TAM+V+
Sbjct: 234  GVSAQGAQNTGKT----NKTGPVIQSVGS---SQKVAEVRKIPAKESSRDVP-GTAMEVE 285

Query: 295  GGTGMKTKGQNGNASHESALQNTALEKTKRSSINGEHELKTSXXXXXXXXXXXXXXXXXX 116
              T M+   +  +AS      N A    KR   N + ELK S                  
Sbjct: 286  -DTHMQINSKGSDASATVPTLNPA----KRPHKNSKQELKESVQELAARAASLAKAEAAK 340

Query: 115  XXAPPNSAYEFEVSWRGLSGDCSLQAQLLKATPPTSLP 2
              APPNSAY+FEVSWRGLSGD  LQ  LLK T P+ LP
Sbjct: 341  NIAPPNSAYQFEVSWRGLSGDRDLQTHLLKVTSPSMLP 378


>ref|XP_002277910.2| PREDICTED: RNA polymerase II-associated protein 3 isoform X1 [Vitis
            vinifera]
          Length = 474

 Score =  383 bits (984), Expect = e-103
 Identities = 220/401 (54%), Positives = 270/401 (67%), Gaps = 4/401 (0%)
 Frame = -1

Query: 1192 SRVPSKHSRDQAQDFEGLLNNLQDWELSFKDKDKKRKSQSPGKEKADLLAQRQSVENANQ 1013
            +R PSKH+RDQA DF+G L +LQDWELS K+KDKK K+Q+   E+ D+   R +V+++++
Sbjct: 3    TRFPSKHARDQALDFQGFLTDLQDWELSLKEKDKKMKAQA---EEKDVPTARGNVKHSSK 59

Query: 1012 LSNSSRVDDRRAVGKNAYEDSGGAAKKYDYLRNYDAIRQLSRGFTTEESSVDANSEKELG 833
            LS+S  V  R          S    ++++Y RN+DAI ++S  F TEES  DA SEKELG
Sbjct: 60   LSSSPGVSLRLG-------QSRSDTRQHEYSRNHDAISRISSSFMTEESLPDAASEKELG 112

Query: 832  NEYFKQKKFNEAIDCYSRSIALLPTAVAYANRAMAYIKIKRFQEAENDCTEALNLDDRYI 653
            NEYFKQ+KF EAIDCYSRSIALLPTAVAYANRAMAYIKIKRF+EAE+DC EALNLDDRYI
Sbjct: 113  NEYFKQRKFKEAIDCYSRSIALLPTAVAYANRAMAYIKIKRFREAEDDCMEALNLDDRYI 172

Query: 652  KAYSRRSTARKELGKLKEAYDDAEFALRLEPQNQEIKKQYAEAKSLLDKEILKKVSRAST 473
            KAYSRR+TARKELGK KEA +DAEFALRLEPQNQEIKKQYAEAKSL +KEIL+K S A  
Sbjct: 173  KAYSRRATARKELGKFKEATEDAEFALRLEPQNQEIKKQYAEAKSLYEKEILQKASGALK 232

Query: 472  SSVQGLQKAQKSKVEINKAVNEFEPASSNFTSGMVTEVQDDHRKGNNGEIPLKTAMQVD- 296
            SSVQGLQK  KS VE+N         SS+        +QD         +P  T+  ++ 
Sbjct: 233  SSVQGLQKVGKSVVEVNADTQGVRSISSSSQGAGEAAIQDRFM------VPANTSTSMEE 286

Query: 295  ---GGTGMKTKGQNGNASHESALQNTALEKTKRSSINGEHELKTSXXXXXXXXXXXXXXX 125
                GTG ++K +NG    E+A+QN+ LE    +   G+ E+K+S               
Sbjct: 287  TENKGTGNRSK-ENGYL--ENAVQNSGLEDVMSNHKTGQREMKSSLQELASRAASRAMVE 343

Query: 124  XXXXXAPPNSAYEFEVSWRGLSGDCSLQAQLLKATPPTSLP 2
                   PNSAY+FEVSWRGL GD +LQA  LKA  P +LP
Sbjct: 344  AAKNITAPNSAYQFEVSWRGLLGDHALQASYLKAISPNALP 384


>ref|XP_009611910.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2
            [Nicotiana tomentosiformis]
          Length = 462

 Score =  381 bits (978), Expect = e-103
 Identities = 226/398 (56%), Positives = 266/398 (66%)
 Frame = -1

Query: 1195 MSRVPSKHSRDQAQDFEGLLNNLQDWELSFKDKDKKRKSQSPGKEKADLLAQRQSVENAN 1016
            M+RVPSKHSRDQ   F+GLLN LQDWELS KDKDKK KSQ+ GKEK      R+   + +
Sbjct: 1    MARVPSKHSRDQ---FQGLLNTLQDWELSLKDKDKKMKSQARGKEKL-----REDWSHTS 52

Query: 1015 QLSNSSRVDDRRAVGKNAYEDSGGAAKKYDYLRNYDAIRQLSRGFTTEESSVDANSEKEL 836
            +L    +V   + VGK+    S  AA  YDY + Y+    LS    +EES++DANSEKEL
Sbjct: 53   ELPTGPQVTGTQRVGKSTSISS--AAGPYDYSKKYNPTSHLSSEMLSEESNIDANSEKEL 110

Query: 835  GNEYFKQKKFNEAIDCYSRSIALLPTAVAYANRAMAYIKIKRFQEAENDCTEALNLDDRY 656
            GNE+FKQKKF EAI CYSRSIAL PTAVAYANRAMAY+KIKRFQEAENDCTEALNLDDRY
Sbjct: 111  GNEFFKQKKFKEAIICYSRSIALSPTAVAYANRAMAYLKIKRFQEAENDCTEALNLDDRY 170

Query: 655  IKAYSRRSTARKELGKLKEAYDDAEFALRLEPQNQEIKKQYAEAKSLLDKEILKKVSRAS 476
            IKAYSRRSTARKELGKLKE+ +DAEFA RLEPQNQEIKKQY E K+L +KEILK+VS A+
Sbjct: 171  IKAYSRRSTARKELGKLKESIEDAEFASRLEPQNQEIKKQYGEVKALYEKEILKRVSAAT 230

Query: 475  TSSVQGLQKAQKSKVEINKAVNEFEPASSNFTSGMVTEVQDDHRKGNNGEIPLKTAMQVD 296
              S QG QK  K+    NK     +  S   +S  V EV+    K NN ++P  TAM+V+
Sbjct: 231  GVSAQGAQKTGKT----NKTGPVIQSVSG--SSQKVAEVRKIPAKENNRDVP-GTAMEVE 283

Query: 295  GGTGMKTKGQNGNASHESALQNTALEKTKRSSINGEHELKTSXXXXXXXXXXXXXXXXXX 116
              T M+   ++ +AS      N A    KR+  N + ELK S                  
Sbjct: 284  -DTHMQINSKDSDASATVPTLNPA----KRTHKNSKQELKESVQELAARAASLAKAEAAK 338

Query: 115  XXAPPNSAYEFEVSWRGLSGDCSLQAQLLKATPPTSLP 2
              APPNSAY+FEVSWRGLSGD +LQ  LLK T P +LP
Sbjct: 339  NIAPPNSAYQFEVSWRGLSGDRNLQTHLLKVTSPATLP 376


>ref|XP_009767318.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X3
            [Nicotiana sylvestris]
          Length = 461

 Score =  377 bits (967), Expect = e-101
 Identities = 222/398 (55%), Positives = 263/398 (66%)
 Frame = -1

Query: 1195 MSRVPSKHSRDQAQDFEGLLNNLQDWELSFKDKDKKRKSQSPGKEKADLLAQRQSVENAN 1016
            M+RVP KH+RDQ   F+GLLNNLQDWELS KDKDKK KSQ+ GKEK      R+   + +
Sbjct: 1    MARVPGKHTRDQ---FQGLLNNLQDWELSLKDKDKKMKSQARGKEKL-----REDWSHTS 52

Query: 1015 QLSNSSRVDDRRAVGKNAYEDSGGAAKKYDYLRNYDAIRQLSRGFTTEESSVDANSEKEL 836
            +L    +V+  + VGK+      GAA  YDY + Y+    LS    +EES++DANSEKEL
Sbjct: 53   ELPTGPQVNGTQRVGKSTL--ISGAAGPYDYSKKYNPTSHLSSEMLSEESNIDANSEKEL 110

Query: 835  GNEYFKQKKFNEAIDCYSRSIALLPTAVAYANRAMAYIKIKRFQEAENDCTEALNLDDRY 656
            GNE+FKQKKF EAIDCYSRSIAL PTAVAYANRAMAY+K+KRFQEAENDCTEALNLDDRY
Sbjct: 111  GNEFFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLKRFQEAENDCTEALNLDDRY 170

Query: 655  IKAYSRRSTARKELGKLKEAYDDAEFALRLEPQNQEIKKQYAEAKSLLDKEILKKVSRAS 476
            IKAYSRRSTARKELGKLKE+ +DAEFA RLEPQNQEIKKQY E K+L +KEILK+VS A+
Sbjct: 171  IKAYSRRSTARKELGKLKESIEDAEFASRLEPQNQEIKKQYGEVKALYEKEILKRVSGAT 230

Query: 475  TSSVQGLQKAQKSKVEINKAVNEFEPASSNFTSGMVTEVQDDHRKGNNGEIPLKTAMQVD 296
              S QG Q   K+    NK     +   S   S  V EV+    K ++ ++P  TAM+V+
Sbjct: 231  GVSAQGAQNTGKT----NKTGPVIQSVGS---SQKVAEVRKIPAKESSRDVP-GTAMEVE 282

Query: 295  GGTGMKTKGQNGNASHESALQNTALEKTKRSSINGEHELKTSXXXXXXXXXXXXXXXXXX 116
              T M+   +  +AS      N A    KR   N + ELK S                  
Sbjct: 283  -DTHMQINSKGSDASATVPTLNPA----KRPHKNSKQELKESVQELAARAASLAKAEAAK 337

Query: 115  XXAPPNSAYEFEVSWRGLSGDCSLQAQLLKATPPTSLP 2
              APPNSAY+FEVSWRGLSGD  LQ  LLK T P+ LP
Sbjct: 338  NIAPPNSAYQFEVSWRGLSGDRDLQTHLLKVTSPSMLP 375


>ref|XP_011038926.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X3
            [Populus euphratica]
          Length = 472

 Score =  372 bits (955), Expect = e-100
 Identities = 209/405 (51%), Positives = 266/405 (65%), Gaps = 7/405 (1%)
 Frame = -1

Query: 1195 MSRVPSKHSRDQAQDFEGLLNNLQDWELSFKDKDKKRKSQSPGKEKADLLAQRQSVENAN 1016
            M+R P KH RDQA DF+G LN+LQDWEL  KD DKK K++S   +K              
Sbjct: 1    MARAPGKHGRDQALDFQGFLNDLQDWEL-LKDTDKKVKTKSQASDKIG------------ 47

Query: 1015 QLSNSSRVDDRRAVGK-NAYEDSGGAAKKYDYLRNYDAIRQLSRGFTTEESSVDANSEKE 839
                    +D R+ GK +A + S   + +YDY RN+ AI +LS  FTT+E +VDA +EKE
Sbjct: 48   --------EDGRSKGKTSAVDSSRSGSGQYDYSRNFGAINRLSSNFTTDEITVDATTEKE 99

Query: 838  LGNEYFKQKKFNEAIDCYSRSIALLPTAVAYANRAMAYIKIKRFQEAENDCTEALNLDDR 659
            LGNEYFKQKKFNEAI+CYSRSIAL PTAVAYANRAMAY+KIKRF+EAE+DCTE LNLDD 
Sbjct: 100  LGNEYFKQKKFNEAIECYSRSIALSPTAVAYANRAMAYLKIKRFREAEDDCTETLNLDDH 159

Query: 658  YIKAYSRRSTARKELGKLKEAYDDAEFALRLEPQNQEIKKQYAEAKSLLDKEILKKVSRA 479
            YIKAYSRR+TARKELGKLKE+ +D+EFAL+LEP NQEIKKQYAE KSL +KEIL+K S A
Sbjct: 160  YIKAYSRRATARKELGKLKESIEDSEFALKLEPINQEIKKQYAEVKSLYEKEILQKASGA 219

Query: 478  STSSVQGLQKAQKSKVEINKAVNEFEPASSNFTSGMVTEVQDDHRKGNNGEIPLKTAMQV 299
              SS+QG QK  +S+  +N   +   P S    +  V+  + D+ K N+G   +K +++V
Sbjct: 220  LRSSLQGTQKGGRSEASVNG--HAVHPVSIPTQNTGVSASKKDNTKENDGNNLVKKSVRV 277

Query: 298  ------DGGTGMKTKGQNGNASHESALQNTALEKTKRSSINGEHELKTSXXXXXXXXXXX 137
                    G G K+ G  GN S  +A  +++++  ++++     ELKTS           
Sbjct: 278  KEVRNKGTGAGSKSDGHVGNDSPANATLSSSVDSVQKNNRTQRQELKTSVMELASQAASR 337

Query: 136  XXXXXXXXXAPPNSAYEFEVSWRGLSGDCSLQAQLLKATPPTSLP 2
                      PPNSAY+FEVSWRG SGD +LQA LLK T P++LP
Sbjct: 338  AMAEAAKNITPPNSAYQFEVSWRGFSGDRALQAHLLKVTSPSALP 382


>ref|XP_011038924.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X1
            [Populus euphratica]
          Length = 473

 Score =  371 bits (953), Expect = e-100
 Identities = 210/405 (51%), Positives = 267/405 (65%), Gaps = 7/405 (1%)
 Frame = -1

Query: 1195 MSRVPSKHSRDQAQDFEGLLNNLQDWELSFKDKDKKRKSQSPGKEKADLLAQRQSVENAN 1016
            M+R P KH RDQA DF+G LN+LQDWEL  KD DKK K++S                   
Sbjct: 1    MARAPGKHGRDQALDFQGFLNDLQDWEL-LKDTDKKVKTKS------------------- 40

Query: 1015 QLSNSSRVDDRRAVGK-NAYEDSGGAAKKYDYLRNYDAIRQLSRGFTTEESSVDANSEKE 839
            Q S+    +D R+ GK +A + S   + +YDY RN+ AI +LS  FTT+E +VDA +EKE
Sbjct: 41   QASDVKIGEDGRSKGKTSAVDSSRSGSGQYDYSRNFGAINRLSSNFTTDEITVDATTEKE 100

Query: 838  LGNEYFKQKKFNEAIDCYSRSIALLPTAVAYANRAMAYIKIKRFQEAENDCTEALNLDDR 659
            LGNEYFKQKKFNEAI+CYSRSIAL PTAVAYANRAMAY+KIKRF+EAE+DCTE LNLDD 
Sbjct: 101  LGNEYFKQKKFNEAIECYSRSIALSPTAVAYANRAMAYLKIKRFREAEDDCTETLNLDDH 160

Query: 658  YIKAYSRRSTARKELGKLKEAYDDAEFALRLEPQNQEIKKQYAEAKSLLDKEILKKVSRA 479
            YIKAYSRR+TARKELGKLKE+ +D+EFAL+LEP NQEIKKQYAE KSL +KEIL+K S A
Sbjct: 161  YIKAYSRRATARKELGKLKESIEDSEFALKLEPINQEIKKQYAEVKSLYEKEILQKASGA 220

Query: 478  STSSVQGLQKAQKSKVEINKAVNEFEPASSNFTSGMVTEVQDDHRKGNNGEIPLKTAMQV 299
              SS+QG QK  +S+  +N   +   P S    +  V+  + D+ K N+G   +K +++V
Sbjct: 221  LRSSLQGTQKGGRSEASVNG--HAVHPVSIPTQNTGVSASKKDNTKENDGNNLVKKSVRV 278

Query: 298  ------DGGTGMKTKGQNGNASHESALQNTALEKTKRSSINGEHELKTSXXXXXXXXXXX 137
                    G G K+ G  GN S  +A  +++++  ++++     ELKTS           
Sbjct: 279  KEVRNKGTGAGSKSDGHVGNDSPANATLSSSVDSVQKNNRTQRQELKTSVMELASQAASR 338

Query: 136  XXXXXXXXXAPPNSAYEFEVSWRGLSGDCSLQAQLLKATPPTSLP 2
                      PPNSAY+FEVSWRG SGD +LQA LLK T P++LP
Sbjct: 339  AMAEAAKNITPPNSAYQFEVSWRGFSGDRALQAHLLKVTSPSALP 383


>ref|XP_011023785.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1 [Populus
            euphratica]
          Length = 473

 Score =  371 bits (953), Expect = e-100
 Identities = 208/405 (51%), Positives = 263/405 (64%), Gaps = 7/405 (1%)
 Frame = -1

Query: 1195 MSRVPSKHSRDQAQDFEGLLNNLQDWELSFKDKDKKRKSQSPGKEKADLLAQRQSVENAN 1016
            M+R P KH RDQA DF+G LN+LQDWEL  KD DKK K +S                   
Sbjct: 1    MARAPGKHGRDQALDFQGFLNDLQDWEL-LKDTDKKMKKKS------------------- 40

Query: 1015 QLSNSSRVDDRRAVGKNAYE-DSGGAAKKYDYLRNYDAIRQLSRGFTTEESSVDANSEKE 839
            Q S+    +D R+ GK +   D   ++  YD+ RN+DAI +LS  F  +ES+VDA +EKE
Sbjct: 41   QASDMKIGEDERSTGKTSSAVDFSSSSGMYDHSRNFDAINRLSNSFAIDESTVDATTEKE 100

Query: 838  LGNEYFKQKKFNEAIDCYSRSIALLPTAVAYANRAMAYIKIKRFQEAENDCTEALNLDDR 659
            LGNEYFKQKK+ EAI+CYSRSIAL PTAVAYANRAMAY+KIKRF EAE+DCTEALNLDDR
Sbjct: 101  LGNEYFKQKKYKEAIECYSRSIALSPTAVAYANRAMAYLKIKRFPEAEDDCTEALNLDDR 160

Query: 658  YIKAYSRRSTARKELGKLKEAYDDAEFALRLEPQNQEIKKQYAEAKSLLDKEILKKVSRA 479
            YIKAYSRR+TARKELGKLKE+ +D+EFAL+LEP NQEIKKQYAE KSL +KEIL+K S +
Sbjct: 161  YIKAYSRRATARKELGKLKESIEDSEFALKLEPNNQEIKKQYAEVKSLYEKEILQKASES 220

Query: 478  STSSVQGLQKAQKSKVEINKAVNEFEPASSNFTSGMVTEVQDDHRKGNNGEIPLKTAMQV 299
              SS+QG +K  +S+  +N   +   P S+       +  Q D  K N+G+  +K ++ V
Sbjct: 221  LRSSLQGAKKGGRSETSVNG--HAVHPVSNVTRRTGASASQKDKAKENDGDGVVKKSVYV 278

Query: 298  D------GGTGMKTKGQNGNASHESALQNTALEKTKRSSINGEHELKTSXXXXXXXXXXX 137
            +       G G ++ GQ GN S  +A+ ++  E  +R++  G  ELK S           
Sbjct: 279  EEIKNKSTGAGSRSDGQLGNDSRANAIPSSNAEIIQRNNRAGRQELKASVKELASQAASR 338

Query: 136  XXXXXXXXXAPPNSAYEFEVSWRGLSGDCSLQAQLLKATPPTSLP 2
                      PPNSAY+FEVSWRG SGD +LQA LLK T P++LP
Sbjct: 339  AMAEAAKNITPPNSAYQFEVSWRGFSGDRALQAHLLKVTTPSALP 383


>ref|XP_009767301.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1
            [Nicotiana sylvestris]
          Length = 484

 Score =  371 bits (953), Expect = e-100
 Identities = 223/418 (53%), Positives = 264/418 (63%), Gaps = 20/418 (4%)
 Frame = -1

Query: 1195 MSRVPSKHSRDQAQ--------------------DFEGLLNNLQDWELSFKDKDKKRKSQ 1076
            M+RVP KH+RDQ Q                    D +GLLNNLQDWELS KDKDKK KSQ
Sbjct: 1    MARVPGKHTRDQFQGFICSILSGLWFYWHYLADQDMQGLLNNLQDWELSLKDKDKKMKSQ 60

Query: 1075 SPGKEKADLLAQRQSVENANQLSNSSRVDDRRAVGKNAYEDSGGAAKKYDYLRNYDAIRQ 896
            + GKEK      R+   + ++L    +V+  + VGK+      GAA  YDY + Y+    
Sbjct: 61   ARGKEKL-----REDWSHTSELPTGPQVNGTQRVGKSTL--ISGAAGPYDYSKKYNPTSH 113

Query: 895  LSRGFTTEESSVDANSEKELGNEYFKQKKFNEAIDCYSRSIALLPTAVAYANRAMAYIKI 716
            LS    +EES++DANSEKELGNE+FKQKKF EAIDCYSRSIAL PTAVAYANRAMAY+K+
Sbjct: 114  LSSEMLSEESNIDANSEKELGNEFFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKL 173

Query: 715  KRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLKEAYDDAEFALRLEPQNQEIKKQ 536
            KRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLKE+ +DAEFA RLEPQNQEIKKQ
Sbjct: 174  KRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLKESIEDAEFASRLEPQNQEIKKQ 233

Query: 535  YAEAKSLLDKEILKKVSRASTSSVQGLQKAQKSKVEINKAVNEFEPASSNFTSGMVTEVQ 356
            Y E K+L +KEILK+VS A+  S QG Q   K+    NK     +   S   S  V EV+
Sbjct: 234  YGEVKALYEKEILKRVSGATGVSAQGAQNTGKT----NKTGPVIQSVGS---SQKVAEVR 286

Query: 355  DDHRKGNNGEIPLKTAMQVDGGTGMKTKGQNGNASHESALQNTALEKTKRSSINGEHELK 176
                K ++ ++P  TAM+V+  T M+   +  +AS      N A    KR   N + ELK
Sbjct: 287  KIPAKESSRDVP-GTAMEVE-DTHMQINSKGSDASATVPTLNPA----KRPHKNSKQELK 340

Query: 175  TSXXXXXXXXXXXXXXXXXXXXAPPNSAYEFEVSWRGLSGDCSLQAQLLKATPPTSLP 2
             S                    APPNSAY+FEVSWRGLSGD  LQ  LLK T P+ LP
Sbjct: 341  ESVQELAARAASLAKAEAAKNIAPPNSAYQFEVSWRGLSGDRDLQTHLLKVTSPSMLP 398


>ref|XP_011038925.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X2
            [Populus euphratica]
          Length = 472

 Score =  370 bits (951), Expect = 1e-99
 Identities = 209/405 (51%), Positives = 269/405 (66%), Gaps = 7/405 (1%)
 Frame = -1

Query: 1195 MSRVPSKHSRDQAQDFEGLLNNLQDWELSFKDKDKKRKSQSPGKEKADLLAQRQSVENAN 1016
            M+R P KH RDQA DF+G LN+LQDWEL  KD DKK K++S   + +D++ +        
Sbjct: 1    MARAPGKHGRDQALDFQGFLNDLQDWEL-LKDTDKKVKTKS---QASDVIGE-------- 48

Query: 1015 QLSNSSRVDDRRAVGK-NAYEDSGGAAKKYDYLRNYDAIRQLSRGFTTEESSVDANSEKE 839
                     D R+ GK +A + S   + +YDY RN+ AI +LS  FTT+E +VDA +EKE
Sbjct: 49   ---------DGRSKGKTSAVDSSRSGSGQYDYSRNFGAINRLSSNFTTDEITVDATTEKE 99

Query: 838  LGNEYFKQKKFNEAIDCYSRSIALLPTAVAYANRAMAYIKIKRFQEAENDCTEALNLDDR 659
            LGNEYFKQKKFNEAI+CYSRSIAL PTAVAYANRAMAY+KIKRF+EAE+DCTE LNLDD 
Sbjct: 100  LGNEYFKQKKFNEAIECYSRSIALSPTAVAYANRAMAYLKIKRFREAEDDCTETLNLDDH 159

Query: 658  YIKAYSRRSTARKELGKLKEAYDDAEFALRLEPQNQEIKKQYAEAKSLLDKEILKKVSRA 479
            YIKAYSRR+TARKELGKLKE+ +D+EFAL+LEP NQEIKKQYAE KSL +KEIL+K S A
Sbjct: 160  YIKAYSRRATARKELGKLKESIEDSEFALKLEPINQEIKKQYAEVKSLYEKEILQKASGA 219

Query: 478  STSSVQGLQKAQKSKVEINKAVNEFEPASSNFTSGMVTEVQDDHRKGNNGEIPLKTAMQV 299
              SS+QG QK  +S+  +N   +   P S    +  V+  + D+ K N+G   +K +++V
Sbjct: 220  LRSSLQGTQKGGRSEASVNG--HAVHPVSIPTQNTGVSASKKDNTKENDGNNLVKKSVRV 277

Query: 298  ------DGGTGMKTKGQNGNASHESALQNTALEKTKRSSINGEHELKTSXXXXXXXXXXX 137
                    G G K+ G  GN S  +A  +++++  ++++     ELKTS           
Sbjct: 278  KEVRNKGTGAGSKSDGHVGNDSPANATLSSSVDSVQKNNRTQRQELKTSVMELASQAASR 337

Query: 136  XXXXXXXXXAPPNSAYEFEVSWRGLSGDCSLQAQLLKATPPTSLP 2
                      PPNSAY+FEVSWRG SGD +LQA LLK T P++LP
Sbjct: 338  AMAEAAKNITPPNSAYQFEVSWRGFSGDRALQAHLLKVTSPSALP 382


>ref|XP_011023786.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2 [Populus
            euphratica]
          Length = 472

 Score =  370 bits (951), Expect = 1e-99
 Identities = 207/405 (51%), Positives = 265/405 (65%), Gaps = 7/405 (1%)
 Frame = -1

Query: 1195 MSRVPSKHSRDQAQDFEGLLNNLQDWELSFKDKDKKRKSQSPGKEKADLLAQRQSVENAN 1016
            M+R P KH RDQA DF+G LN+LQDWEL  KD DKK K +S   + +D++ +        
Sbjct: 1    MARAPGKHGRDQALDFQGFLNDLQDWEL-LKDTDKKMKKKS---QASDMIGE-------- 48

Query: 1015 QLSNSSRVDDRRAVGKNAYE-DSGGAAKKYDYLRNYDAIRQLSRGFTTEESSVDANSEKE 839
                     D R+ GK +   D   ++  YD+ RN+DAI +LS  F  +ES+VDA +EKE
Sbjct: 49   ---------DERSTGKTSSAVDFSSSSGMYDHSRNFDAINRLSNSFAIDESTVDATTEKE 99

Query: 838  LGNEYFKQKKFNEAIDCYSRSIALLPTAVAYANRAMAYIKIKRFQEAENDCTEALNLDDR 659
            LGNEYFKQKK+ EAI+CYSRSIAL PTAVAYANRAMAY+KIKRF EAE+DCTEALNLDDR
Sbjct: 100  LGNEYFKQKKYKEAIECYSRSIALSPTAVAYANRAMAYLKIKRFPEAEDDCTEALNLDDR 159

Query: 658  YIKAYSRRSTARKELGKLKEAYDDAEFALRLEPQNQEIKKQYAEAKSLLDKEILKKVSRA 479
            YIKAYSRR+TARKELGKLKE+ +D+EFAL+LEP NQEIKKQYAE KSL +KEIL+K S +
Sbjct: 160  YIKAYSRRATARKELGKLKESIEDSEFALKLEPNNQEIKKQYAEVKSLYEKEILQKASES 219

Query: 478  STSSVQGLQKAQKSKVEINKAVNEFEPASSNFTSGMVTEVQDDHRKGNNGEIPLKTAMQV 299
              SS+QG +K  +S+  +N   +   P S+       +  Q D  K N+G+  +K ++ V
Sbjct: 220  LRSSLQGAKKGGRSETSVNG--HAVHPVSNVTRRTGASASQKDKAKENDGDGVVKKSVYV 277

Query: 298  D------GGTGMKTKGQNGNASHESALQNTALEKTKRSSINGEHELKTSXXXXXXXXXXX 137
            +       G G ++ GQ GN S  +A+ ++  E  +R++  G  ELK S           
Sbjct: 278  EEIKNKSTGAGSRSDGQLGNDSRANAIPSSNAEIIQRNNRAGRQELKASVKELASQAASR 337

Query: 136  XXXXXXXXXAPPNSAYEFEVSWRGLSGDCSLQAQLLKATPPTSLP 2
                      PPNSAY+FEVSWRG SGD +LQA LLK T P++LP
Sbjct: 338  AMAEAAKNITPPNSAYQFEVSWRGFSGDRALQAHLLKVTTPSALP 382


>gb|EYU34893.1| hypothetical protein MIMGU_mgv1a005743mg [Erythranthe guttata]
          Length = 462

 Score =  369 bits (946), Expect = 4e-99
 Identities = 212/399 (53%), Positives = 267/399 (66%), Gaps = 1/399 (0%)
 Frame = -1

Query: 1195 MSRVPSKHSRDQAQDFEGLLNNLQDWELSFKDKDKKRKSQSPGKEKADLLAQRQSVENAN 1016
            M++ PSKHSRD  QD          WELSFK+KDKK +S + GK K      + S  N  
Sbjct: 1    MAKTPSKHSRDLPQD----------WELSFKEKDKKMRSDAVGKAKLKDQLGQPSGNNVG 50

Query: 1015 QLSNSSRVDDRRAVGKNAYEDSGGAAKKYDYLRNYDAIRQLSRGFTTEESSVDANSEKEL 836
            +  +S++V  ++ + K    ++    K+YD+L+ Y+A+ +LS    + ES VDANSEKEL
Sbjct: 51   RPYDSAKVHRKQTMEKTPSYENPSTVKQYDHLKEYEALSRLSSAVPSTESFVDANSEKEL 110

Query: 835  GNEYFKQKKFNEAIDCYSRSIALLPTAVAYANRAMAYIKIKRFQEAENDCTEALNLDDRY 656
            GNE+FKQKKF EAIDCYSRSIAL P+AVAYANRAMAYIKI+RFQEAENDCTEALNLDDRY
Sbjct: 111  GNEFFKQKKFTEAIDCYSRSIALSPSAVAYANRAMAYIKIRRFQEAENDCTEALNLDDRY 170

Query: 655  IKAYSRRSTARKELGKLKEAYDDAEFALRLEPQNQEIKKQYAEAKSLLDKEILKKVSRAS 476
            IKAYSRRSTARKELGKLKE+ DDAEFALRLEPQNQEIKKQ+AE+KSLL+K ILKKVS A 
Sbjct: 171  IKAYSRRSTARKELGKLKESMDDAEFALRLEPQNQEIKKQFAESKSLLEKAILKKVSGAL 230

Query: 475  TSSVQGLQKAQKSKVEINKAVNEFEPASSNFTSGMVTEVQDDHRKGNNG-EIPLKTAMQV 299
            T SV+G   AQ  K E++K  N  +P      SG VTE+ +++ KGN   E+   T+M++
Sbjct: 231  TGSVEG---AQPGKSEVDKNNNVQKP-----LSGRVTEILEENPKGNKSREVTADTSMEI 282

Query: 298  DGGTGMKTKGQNGNASHESALQNTALEKTKRSSINGEHELKTSXXXXXXXXXXXXXXXXX 119
               + +++ G +     E+A     L +TK    NG+ +LK S                 
Sbjct: 283  KQNS-VRSNGSDVITDSETA----KLSQTKPK--NGKQQLKASVQELAAKAANLAKAEAA 335

Query: 118  XXXAPPNSAYEFEVSWRGLSGDCSLQAQLLKATPPTSLP 2
                PPNSAY+FEVSWRGLS D +LQ +LL+ T P +LP
Sbjct: 336  KNIVPPNSAYQFEVSWRGLSNDRNLQTRLLQVTSPAALP 374


>ref|XP_006382393.1| hypothetical protein POPTR_0005s01710g [Populus trichocarpa]
            gi|550337753|gb|ERP60190.1| hypothetical protein
            POPTR_0005s01710g [Populus trichocarpa]
          Length = 402

 Score =  367 bits (942), Expect = 1e-98
 Identities = 207/400 (51%), Positives = 264/400 (66%), Gaps = 2/400 (0%)
 Frame = -1

Query: 1195 MSRVPSKHSRDQAQDFEGLLNNLQDWELSFKDKDKKRKSQSPGKEKADLLAQRQSVENAN 1016
            M+RVP KH RDQA DF+G LN+LQDWEL  KD DKK K +S                   
Sbjct: 1    MARVPGKHGRDQALDFQGFLNDLQDWEL-LKDTDKKMKKKS------------------- 40

Query: 1015 QLSNSSRVDDRRAVGKNAYEDSGGAAK-KYDYLRNYDAIRQLSRGFTTEESSVDANSEKE 839
            + S+    +D R+ GK +  DS  +   +Y+Y RN+ AI +LS  FTT+E +VDA +EKE
Sbjct: 41   RASDVKIGEDGRSEGKTSAADSSRSGSGQYEYSRNFGAINRLSSSFTTDEITVDATTEKE 100

Query: 838  LGNEYFKQKKFNEAIDCYSRSIALLPTAVAYANRAMAYIKIKRFQEAENDCTEALNLDDR 659
            LGNEYFKQKKFNEAI+CYSRSIAL PTAVAYANRAMAY+KIKRF+EAE+DCTEALNLDDR
Sbjct: 101  LGNEYFKQKKFNEAIECYSRSIALSPTAVAYANRAMAYLKIKRFREAEDDCTEALNLDDR 160

Query: 658  YIKAYSRRSTARKELGKLKEAYDDAEFALRLEPQNQEIKKQYAEAKSLLDKEILKKVSRA 479
            YIKAYSRR+TARKELGKLKE+ +D+EFAL+LEP NQEIKKQYAE KSL +KEIL+K S  
Sbjct: 161  YIKAYSRRATARKELGKLKESIEDSEFALKLEPNNQEIKKQYAEVKSLYEKEILQKASGT 220

Query: 478  STSSVQGLQKAQKSKVEINKAVNEFEPASSNFTSGMVTEVQDDHRKGNNGEIPLKTAMQV 299
              SS+QG Q+  +S+  +N   +   P S       V+  + D+ K N+G   +K ++ V
Sbjct: 221  LRSSLQGTQQGGRSEASVNG--HAVHPVSIATQKTGVSASKKDNTKENDGNNLVKKSVHV 278

Query: 298  -DGGTGMKTKGQNGNASHESALQNTALEKTKRSSINGEHELKTSXXXXXXXXXXXXXXXX 122
             +     K+ G  GN S  +A  ++++E  ++++     ELKTS                
Sbjct: 279  KELRNRSKSDGHVGNDSPANATPSSSVESVQKNNRTRRQELKTSVIELASQAASRAMAEA 338

Query: 121  XXXXAPPNSAYEFEVSWRGLSGDCSLQAQLLKATPPTSLP 2
                 PPNSAY+FEVSW+G SGD +LQA LLK T P++LP
Sbjct: 339  AKNITPPNSAYQFEVSWQGFSGDRALQAHLLKVTSPSALP 378