BLASTX nr result

ID: Gardenia21_contig00021212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00021212
         (489 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP00396.1| unnamed protein product [Coffea canephora]             60   5e-07
ref|XP_007045953.1| UvrB/uvrC motif-containing protein isoform 4...    56   9e-06

>emb|CDP00396.1| unnamed protein product [Coffea canephora]
          Length = 338

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 28/29 (96%), Positives = 28/29 (96%)
 Frame = -2

Query: 89  QVLVDVYMDPNLLVAYVPEENLYAPDKPD 3
           QVLVDVYMDPNLLVAYVPEENL APDKPD
Sbjct: 258 QVLVDVYMDPNLLVAYVPEENLCAPDKPD 286


>ref|XP_007045953.1| UvrB/uvrC motif-containing protein isoform 4 [Theobroma cacao]
           gi|508709888|gb|EOY01785.1| UvrB/uvrC motif-containing
           protein isoform 4 [Theobroma cacao]
          Length = 326

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 28/53 (52%), Positives = 35/53 (66%)
 Frame = -2

Query: 161 LFVYDQKICFYKHEIFCSSTSTVPQVLVDVYMDPNLLVAYVPEENLYAPDKPD 3
           +F Y   +C     + C S+S +    VDVY DPNLLVAYVPEENL AP++PD
Sbjct: 219 IFGYRAVVCGMD-PVCCESSSWMETAQVDVYADPNLLVAYVPEENLLAPEQPD 270


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