BLASTX nr result

ID: Gardenia21_contig00016453 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00016453
         (290 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP12919.1| unnamed protein product [Coffea canephora]            169   1e-39
gb|AGE10680.1| nuclear transcription factor YB7 [Populus nigra x...    64   6e-08
ref|XP_002528664.1| ccaat-binding transcription factor subunit A...    62   2e-07
gb|ADM89632.1| nuclear transcription factor Y-alpha, partial [Po...    57   4e-06
ref|XP_002306345.2| hypothetical protein POPTR_0005s08510g [Popu...    57   5e-06
ref|XP_011025616.1| PREDICTED: nuclear transcription factor Y su...    56   9e-06

>emb|CDP12919.1| unnamed protein product [Coffea canephora]
          Length = 221

 Score =  169 bits (427), Expect = 1e-39
 Identities = 80/94 (85%), Positives = 86/94 (91%), Gaps = 1/94 (1%)
 Frame = -2

Query: 289 DQLPPISPNKTS-GHGKMSRGNDSISTRPNFQSPTNAYYSLDSKVASKGHGDPGRVISYG 113
           DQLPPISPNKTS GHG++SRGND IS RPNFQ+ +NAYYSLDSK ASKGHGDPGR+I Y 
Sbjct: 128 DQLPPISPNKTSSGHGEVSRGNDPISARPNFQTLSNAYYSLDSKGASKGHGDPGRMIGYS 187

Query: 112 ENLMTGAYNIGKIHEIEGNGNRVITTNLHHGIEW 11
           ENLM GAYNIGKIHEIEG+GNRVITTNLHHGIEW
Sbjct: 188 ENLMAGAYNIGKIHEIEGSGNRVITTNLHHGIEW 221


>gb|AGE10680.1| nuclear transcription factor YB7 [Populus nigra x Populus x
           canadensis]
          Length = 223

 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
 Frame = -2

Query: 289 DQLPPISPNKTSGHGKMS-RGNDSISTRPNFQSPTNAYYSLDSKVASKGHGDPGRVISYG 113
           DQL P +      H  +   G+ S+ST  + QS     YSL ++V +K +G   R + Y 
Sbjct: 129 DQLSPTNHGSLGTHETIKVNGSPSLSTGMDLQSFNAGLYSLGTEVTAKSYGQNTRFLGYQ 188

Query: 112 ENLMTGAYNIGKIHEI-EGNGNRVITTNLHHGIEW 11
           ENLM G +N+ KI +  + NGN  +   LHHG+ W
Sbjct: 189 ENLMVGDFNMNKIRDHGDRNGNIAMAGQLHHGVGW 223


>ref|XP_002528664.1| ccaat-binding transcription factor subunit A, putative [Ricinus
           communis] gi|223531887|gb|EEF33703.1| ccaat-binding
           transcription factor subunit A, putative [Ricinus
           communis]
          Length = 220

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 4/64 (6%)
 Frame = -2

Query: 190 TNAYYSLDSKVASKGHGDP-GRVISYGENLMTGA--YNIGKIH-EIEGNGNRVITTNLHH 23
           T  +YSL S+V +K +GD   R + YGENL++GA  +N  KI    +GNGNR +   LHH
Sbjct: 157 TTGFYSLGSQVTNKSYGDNYTRSVGYGENLVSGAGGFNFNKIRGNGDGNGNRAVAAQLHH 216

Query: 22  GIEW 11
           G+EW
Sbjct: 217 GVEW 220


>gb|ADM89632.1| nuclear transcription factor Y-alpha, partial [Populus euphratica]
          Length = 223

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
 Frame = -2

Query: 289 DQLPPISPNKTSGHGKMS-RGNDSISTRPNFQSPTNAYYSLDSKVASKGHGDPGRVISYG 113
           D L P +      H  +   G+ S+ST  + QS     YSL ++V +K +G   R + Y 
Sbjct: 129 DHLSPTNHGSLGTHETIKVNGSPSLSTGMDLQSFNAGLYSLGTEVTAKSYGQNTRFLGYQ 188

Query: 112 ENLMTGAYNIGKIHEI-EGNGNRVITTNLHHGIEW 11
           E+ M G +N+ KI +  + NGN  +   LHHG+ W
Sbjct: 189 ESSMVGDFNMNKIRDHGDRNGNIAMAGQLHHGVGW 223


>ref|XP_002306345.2| hypothetical protein POPTR_0005s08510g [Populus trichocarpa]
           gi|550338407|gb|EEE93341.2| hypothetical protein
           POPTR_0005s08510g [Populus trichocarpa]
          Length = 224

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
 Frame = -2

Query: 289 DQLPPISPNKTSGH--GKMSRGNDSISTRPNFQSPTNAYYSLDSKVASKGHGDPGRVISY 116
           DQL P +      H   K++      ST  + QS  N  YSL ++V +K +G+  R++ Y
Sbjct: 129 DQLSPTNHGTVGTHETNKVNGTLTDPSTEMDLQSFNNGLYSLGTEVTAKSYGENTRLLGY 188

Query: 115 GENLMTGAYNIGKIHEI-EGNGNRVITTNLHHGIEW 11
            EN M G +N+ +I E  + N  R     L+HG+ W
Sbjct: 189 QENFMAGDFNMNRIGENGDRNSERARAAQLYHGVRW 224


>ref|XP_011025616.1| PREDICTED: nuclear transcription factor Y subunit B-1-like [Populus
           euphratica]
          Length = 223

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
 Frame = -2

Query: 289 DQLPPISPNKTSGHGKMS-RGNDSISTRPNFQSPTNAYYSLDSKVASKGHGDPGRVISYG 113
           DQL P +      H  +   G+ S+ST  + QS    +YSL ++V ++ +G   R   + 
Sbjct: 129 DQLSPTNHGSLGTHETIKVNGSSSLSTGMDLQSSNAGHYSLGTEVTARSYGQNTRFFGFQ 188

Query: 112 ENLMTGAYNIGKIHEI-EGNGNRVITTNLHHGIEW 11
           E+ M G +N+  I +  + NGN  +   LHHG+ W
Sbjct: 189 ESSMVGDFNMNTIRDHGDRNGNIAMAGQLHHGVGW 223


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