BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00016006
         (754 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP15951.1| unnamed protein product [Coffea canephora]            481   e-133
ref|XP_007048731.1| Pentatricopeptide repeat superfamily protein...   353   7e-95
ref|XP_007048729.1| Pentatricopeptide repeat superfamily protein...   353   7e-95
ref|XP_007048728.1| Pentatricopeptide repeat superfamily protein...   353   7e-95
gb|KDO79612.1| hypothetical protein CISIN_1g012782mg [Citrus sin...   340   6e-91
ref|XP_006450549.1| hypothetical protein CICLE_v10008244mg [Citr...   340   6e-91
ref|XP_006450548.1| hypothetical protein CICLE_v10008244mg [Citr...   340   6e-91
ref|XP_009593769.1| PREDICTED: putative pentatricopeptide repeat...   338   2e-90
ref|XP_008364749.1| PREDICTED: pentatricopeptide repeat-containi...   337   5e-90
ref|XP_012464405.1| PREDICTED: putative pentatricopeptide repeat...   336   9e-90
ref|XP_008369674.1| PREDICTED: pentatricopeptide repeat-containi...   336   9e-90
ref|XP_012453674.1| PREDICTED: putative pentatricopeptide repeat...   336   1e-89
ref|XP_008227583.1| PREDICTED: pentatricopeptide repeat-containi...   335   3e-89
ref|XP_007215356.1| hypothetical protein PRUPE_ppa005519mg [Prun...   334   4e-89
ref|XP_008228937.1| PREDICTED: putative pentatricopeptide repeat...   333   6e-89
ref|XP_009790968.1| PREDICTED: putative pentatricopeptide repeat...   331   4e-88
ref|XP_010323680.1| PREDICTED: putative pentatricopeptide repeat...   330   5e-88
ref|XP_004243786.1| PREDICTED: putative pentatricopeptide repeat...   330   5e-88
ref|XP_006348886.1| PREDICTED: putative pentatricopeptide repeat...   329   1e-87
ref|XP_002532784.1| pentatricopeptide repeat-containing protein,...   329   1e-87

>emb|CDP15951.1| unnamed protein product [Coffea canephora]
          Length = 457

 Score =  481 bits (1239), Expect = e-133
 Identities = 232/250 (92%), Positives = 237/250 (94%)
 Frame = -3

Query: 752 TFNIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEI 573
           TFNIM TGLCKN YTDNALMLLRNLQR+GFRPELVTYNILIDGLCKS KWRTVKGLLKEI
Sbjct: 149 TFNIMFTGLCKNWYTDNALMLLRNLQRNGFRPELVTYNILIDGLCKSGKWRTVKGLLKEI 208

Query: 572 LDYGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRI 393
           LDYGHIPNAITYTTVMKCCFKNKM NEGLEIFSEMK KGYTFDGFAYCTVAGALL+ GRI
Sbjct: 209 LDYGHIPNAITYTTVMKCCFKNKMFNEGLEIFSEMKAKGYTFDGFAYCTVAGALLRTGRI 268

Query: 392 EEANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTIL 213
           EEANQCMGNMFRSGID DMVCYNTLINLYCKEGKL+DAF  LD+ EKMGLECDIYTHTIL
Sbjct: 269 EEANQCMGNMFRSGIDLDMVCYNTLINLYCKEGKLEDAFGLLDEVEKMGLECDIYTHTIL 328

Query: 212 IDGLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAKDE 33
           IDGLCKAGNIQGA+RHLKYLNKMGFGTNL AFNSFI GLCKLGQIEYAMQVFESMK KDE
Sbjct: 329 IDGLCKAGNIQGAQRHLKYLNKMGFGTNLVAFNSFIDGLCKLGQIEYAMQVFESMKVKDE 388

Query: 32  FTYSSIVQGL 3
           FTYSSIVQGL
Sbjct: 389 FTYSSIVQGL 398



 Score =  117 bits (294), Expect = 6e-24
 Identities = 73/254 (28%), Positives = 123/254 (48%), Gaps = 4/254 (1%)
 Frame = -3

Query: 752 TFNIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEI 573
           + NI +  LC+ +   NA  +L +  R G  P++VTYN LIDG C+     +   +L  +
Sbjct: 9   SLNICIASLCRVKNLKNAEAVLIDGIRVGILPDVVTYNTLIDGYCRLFGIDSGYSVLGRM 68

Query: 572 LDYGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRI 393
           ++ G  PN ITY T++ C  + ++L + L+IF EM   G   D ++Y  +     K G+ 
Sbjct: 69  MEAGIHPNVITYNTLLSCASRYRLLYQSLDIFDEMLQVGILPDVWSYNILMHCFFKVGKP 128

Query: 392 EEANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTIL 213
           +EA +   ++F   I      +N +    CK     +A   L + ++ G   ++ T+ IL
Sbjct: 129 DEAYRVFKDIFLRNIYPSPATFNIMFTGLCKNWYTDNALMLLRNLQRNGFRPELVTYNIL 188

Query: 212 IDGLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAK-- 39
           IDGLCK+G  +  +  LK +   G   N   + + +    K       +++F  MKAK  
Sbjct: 189 IDGLCKSGKWRTVKGLLKEILDYGHIPNAITYTTVMKCCFKNKMFNEGLEIFSEMKAKGY 248

Query: 38  --DEFTYSSIVQGL 3
             D F Y ++   L
Sbjct: 249 TFDGFAYCTVAGAL 262



 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 36/134 (26%), Positives = 65/134 (48%)
 Frame = -3

Query: 749 FNIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEIL 570
           +N ++   CK    ++A  LL  +++ G   ++ T+ ILIDGLCK+   +  +  LK + 
Sbjct: 290 YNTLINLYCKEGKLEDAFGLLDEVEKMGLECDIYTHTILIDGLCKAGNIQGAQRHLKYLN 349

Query: 569 DYGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRIE 390
             G   N + + + +    K   +   +++F  MK+K    D F Y ++   L  AGR  
Sbjct: 350 KMGFGTNLVAFNSFIDGLCKLGQIEYAMQVFESMKVK----DEFTYSSIVQGLCSAGRFH 405

Query: 389 EANQCMGNMFRSGI 348
            A + +    RSG+
Sbjct: 406 LAARLLLCCVRSGV 419


>ref|XP_007048731.1| Pentatricopeptide repeat superfamily protein, putative isoform 4
           [Theobroma cacao] gi|590710091|ref|XP_007048732.1|
           Pentatricopeptide repeat superfamily protein, putative
           isoform 4 [Theobroma cacao] gi|508700992|gb|EOX92888.1|
           Pentatricopeptide repeat superfamily protein, putative
           isoform 4 [Theobroma cacao] gi|508700993|gb|EOX92889.1|
           Pentatricopeptide repeat superfamily protein, putative
           isoform 4 [Theobroma cacao]
          Length = 490

 Score =  353 bits (906), Expect = 7e-95
 Identities = 162/250 (64%), Positives = 202/250 (80%)
 Frame = -3

Query: 752 TFNIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEI 573
           TFNIM+ GLCKN YT+NA ML RNLQRHGF PEL+TYNIL+ GLCK  +      + KEI
Sbjct: 182 TFNIMMNGLCKNGYTENAFMLFRNLQRHGFVPELMTYNILVSGLCKIGRLGLAMRIFKEI 241

Query: 572 LDYGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRI 393
           ++ GH+PNAITYT V++CCF+ +   EGLE+ SEMK KGYTFDGFAYCTV GAL+K G++
Sbjct: 242 VESGHVPNAITYTPVLRCCFRKRKFEEGLELLSEMKSKGYTFDGFAYCTVIGALIKIGKM 301

Query: 392 EEANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTIL 213
           +EA + M  M R+GI+ D+V YNTLIN+YCK+ KL++A+K LDD EK GLECD YTHTI+
Sbjct: 302 KEATEFMVEMMRTGIELDIVSYNTLINMYCKDNKLEEAYKLLDDIEKKGLECDKYTHTIM 361

Query: 212 IDGLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAKDE 33
           ID LCKAGNI+GA RHLKY++ MGF +NLAA+N FI GLCK+GQI+ AM+VF+SM+ +D 
Sbjct: 362 IDALCKAGNIEGAARHLKYMSTMGFDSNLAAYNCFIDGLCKVGQIDNAMKVFKSMEVRDS 421

Query: 32  FTYSSIVQGL 3
           FTYSS+V  L
Sbjct: 422 FTYSSLVHNL 431



 Score =  100 bits (248), Expect = 1e-18
 Identities = 63/252 (25%), Positives = 119/252 (47%), Gaps = 4/252 (1%)
 Frame = -3

Query: 746 NIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEILD 567
           N+ +   CK    + A  ++ +  R G  P+ VTYNILID  C+         +L  + +
Sbjct: 44  NVCIASFCKAHKLEKAESVIIDGIRLGVLPDGVTYNILIDAYCRLVGIDAGYSVLHRMGE 103

Query: 566 YGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRIEE 387
            G  P+ I+Y +++    +N  ++    +F EM  +G   D ++Y T+     K G+ +E
Sbjct: 104 AGISPDVISYNSLIAGATRNCQISRSFNLFDEMIQRGIAPDIWSYNTLMHGFFKLGKPDE 163

Query: 386 ANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTILID 207
           AN+   ++        +  +N ++N  CK G  ++AF    + ++ G   ++ T+ IL+ 
Sbjct: 164 ANRVFRDIILVEHLPCVATFNIMMNGLCKNGYTENAFMLFRNLQRHGFVPELMTYNILVS 223

Query: 206 GLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAK---- 39
           GLCK G +  A R  K + + G   N   +   +    +  + E  +++   MK+K    
Sbjct: 224 GLCKIGRLGLAMRIFKEIVESGHVPNAITYTPVLRCCFRKRKFEEGLELLSEMKSKGYTF 283

Query: 38  DEFTYSSIVQGL 3
           D F Y +++  L
Sbjct: 284 DGFAYCTVIGAL 295



 Score = 85.5 bits (210), Expect = 4e-14
 Identities = 60/232 (25%), Positives = 110/232 (47%), Gaps = 5/232 (2%)
 Frame = -3

Query: 689 LRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEILDYGHIPNAITYTTVMKCCFK 510
           LR  +R   R      N+ I   CK+ K    + ++ + +  G +P+ +TY  ++    +
Sbjct: 28  LRKRKRMVRRLSTRLLNVCIASFCKAHKLEKAESVIIDGIRLGVLPDGVTYNILIDAYCR 87

Query: 509 NKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRIEEANQCMGNMFRSGIDFDMVC 330
              ++ G  +   M   G + D  +Y ++     +  +I  +      M + GI  D+  
Sbjct: 88  LVGIDAGYSVLHRMGEAGISPDVISYNSLIAGATRNCQISRSFNLFDEMIQRGIAPDIWS 147

Query: 329 YNTLINLYCKEGKLQDAFK-FLDDAEKMGLECDIYTHTILIDGLCKAGNIQGARRHLKYL 153
           YNTL++ + K GK  +A + F D      L C + T  I+++GLCK G  + A    + L
Sbjct: 148 YNTLMHGFFKLGKPDEANRVFRDIILVEHLPC-VATFNIMMNGLCKNGYTENAFMLFRNL 206

Query: 152 NKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVF----ESMKAKDEFTYSSIVQ 9
            + GF   L  +N  + GLCK+G++  AM++F    ES    +  TY+ +++
Sbjct: 207 QRHGFVPELMTYNILVSGLCKIGRLGLAMRIFKEIVESGHVPNAITYTPVLR 258


>ref|XP_007048729.1| Pentatricopeptide repeat superfamily protein, putative isoform 2
           [Theobroma cacao] gi|590710083|ref|XP_007048730.1|
           Pentatricopeptide repeat superfamily protein, putative
           isoform 2 [Theobroma cacao] gi|508700990|gb|EOX92886.1|
           Pentatricopeptide repeat superfamily protein, putative
           isoform 2 [Theobroma cacao] gi|508700991|gb|EOX92887.1|
           Pentatricopeptide repeat superfamily protein, putative
           isoform 2 [Theobroma cacao]
          Length = 457

 Score =  353 bits (906), Expect = 7e-95
 Identities = 162/250 (64%), Positives = 202/250 (80%)
 Frame = -3

Query: 752 TFNIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEI 573
           TFNIM+ GLCKN YT+NA ML RNLQRHGF PEL+TYNIL+ GLCK  +      + KEI
Sbjct: 149 TFNIMMNGLCKNGYTENAFMLFRNLQRHGFVPELMTYNILVSGLCKIGRLGLAMRIFKEI 208

Query: 572 LDYGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRI 393
           ++ GH+PNAITYT V++CCF+ +   EGLE+ SEMK KGYTFDGFAYCTV GAL+K G++
Sbjct: 209 VESGHVPNAITYTPVLRCCFRKRKFEEGLELLSEMKSKGYTFDGFAYCTVIGALIKIGKM 268

Query: 392 EEANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTIL 213
           +EA + M  M R+GI+ D+V YNTLIN+YCK+ KL++A+K LDD EK GLECD YTHTI+
Sbjct: 269 KEATEFMVEMMRTGIELDIVSYNTLINMYCKDNKLEEAYKLLDDIEKKGLECDKYTHTIM 328

Query: 212 IDGLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAKDE 33
           ID LCKAGNI+GA RHLKY++ MGF +NLAA+N FI GLCK+GQI+ AM+VF+SM+ +D 
Sbjct: 329 IDALCKAGNIEGAARHLKYMSTMGFDSNLAAYNCFIDGLCKVGQIDNAMKVFKSMEVRDS 388

Query: 32  FTYSSIVQGL 3
           FTYSS+V  L
Sbjct: 389 FTYSSLVHNL 398



 Score =  100 bits (248), Expect = 1e-18
 Identities = 63/252 (25%), Positives = 119/252 (47%), Gaps = 4/252 (1%)
 Frame = -3

Query: 746 NIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEILD 567
           N+ +   CK    + A  ++ +  R G  P+ VTYNILID  C+         +L  + +
Sbjct: 11  NVCIASFCKAHKLEKAESVIIDGIRLGVLPDGVTYNILIDAYCRLVGIDAGYSVLHRMGE 70

Query: 566 YGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRIEE 387
            G  P+ I+Y +++    +N  ++    +F EM  +G   D ++Y T+     K G+ +E
Sbjct: 71  AGISPDVISYNSLIAGATRNCQISRSFNLFDEMIQRGIAPDIWSYNTLMHGFFKLGKPDE 130

Query: 386 ANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTILID 207
           AN+   ++        +  +N ++N  CK G  ++AF    + ++ G   ++ T+ IL+ 
Sbjct: 131 ANRVFRDIILVEHLPCVATFNIMMNGLCKNGYTENAFMLFRNLQRHGFVPELMTYNILVS 190

Query: 206 GLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAK---- 39
           GLCK G +  A R  K + + G   N   +   +    +  + E  +++   MK+K    
Sbjct: 191 GLCKIGRLGLAMRIFKEIVESGHVPNAITYTPVLRCCFRKRKFEEGLELLSEMKSKGYTF 250

Query: 38  DEFTYSSIVQGL 3
           D F Y +++  L
Sbjct: 251 DGFAYCTVIGAL 262


>ref|XP_007048728.1| Pentatricopeptide repeat superfamily protein, putative isoform 1
           [Theobroma cacao] gi|508700989|gb|EOX92885.1|
           Pentatricopeptide repeat superfamily protein, putative
           isoform 1 [Theobroma cacao]
          Length = 505

 Score =  353 bits (906), Expect = 7e-95
 Identities = 162/250 (64%), Positives = 202/250 (80%)
 Frame = -3

Query: 752 TFNIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEI 573
           TFNIM+ GLCKN YT+NA ML RNLQRHGF PEL+TYNIL+ GLCK  +      + KEI
Sbjct: 197 TFNIMMNGLCKNGYTENAFMLFRNLQRHGFVPELMTYNILVSGLCKIGRLGLAMRIFKEI 256

Query: 572 LDYGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRI 393
           ++ GH+PNAITYT V++CCF+ +   EGLE+ SEMK KGYTFDGFAYCTV GAL+K G++
Sbjct: 257 VESGHVPNAITYTPVLRCCFRKRKFEEGLELLSEMKSKGYTFDGFAYCTVIGALIKIGKM 316

Query: 392 EEANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTIL 213
           +EA + M  M R+GI+ D+V YNTLIN+YCK+ KL++A+K LDD EK GLECD YTHTI+
Sbjct: 317 KEATEFMVEMMRTGIELDIVSYNTLINMYCKDNKLEEAYKLLDDIEKKGLECDKYTHTIM 376

Query: 212 IDGLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAKDE 33
           ID LCKAGNI+GA RHLKY++ MGF +NLAA+N FI GLCK+GQI+ AM+VF+SM+ +D 
Sbjct: 377 IDALCKAGNIEGAARHLKYMSTMGFDSNLAAYNCFIDGLCKVGQIDNAMKVFKSMEVRDS 436

Query: 32  FTYSSIVQGL 3
           FTYSS+V  L
Sbjct: 437 FTYSSLVHNL 446



 Score =  100 bits (248), Expect = 1e-18
 Identities = 63/252 (25%), Positives = 119/252 (47%), Gaps = 4/252 (1%)
 Frame = -3

Query: 746 NIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEILD 567
           N+ +   CK    + A  ++ +  R G  P+ VTYNILID  C+         +L  + +
Sbjct: 59  NVCIASFCKAHKLEKAESVIIDGIRLGVLPDGVTYNILIDAYCRLVGIDAGYSVLHRMGE 118

Query: 566 YGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRIEE 387
            G  P+ I+Y +++    +N  ++    +F EM  +G   D ++Y T+     K G+ +E
Sbjct: 119 AGISPDVISYNSLIAGATRNCQISRSFNLFDEMIQRGIAPDIWSYNTLMHGFFKLGKPDE 178

Query: 386 ANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTILID 207
           AN+   ++        +  +N ++N  CK G  ++AF    + ++ G   ++ T+ IL+ 
Sbjct: 179 ANRVFRDIILVEHLPCVATFNIMMNGLCKNGYTENAFMLFRNLQRHGFVPELMTYNILVS 238

Query: 206 GLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAK---- 39
           GLCK G +  A R  K + + G   N   +   +    +  + E  +++   MK+K    
Sbjct: 239 GLCKIGRLGLAMRIFKEIVESGHVPNAITYTPVLRCCFRKRKFEEGLELLSEMKSKGYTF 298

Query: 38  DEFTYSSIVQGL 3
           D F Y +++  L
Sbjct: 299 DGFAYCTVIGAL 310



 Score = 85.5 bits (210), Expect = 4e-14
 Identities = 60/232 (25%), Positives = 110/232 (47%), Gaps = 5/232 (2%)
 Frame = -3

Query: 689 LRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEILDYGHIPNAITYTTVMKCCFK 510
           LR  +R   R      N+ I   CK+ K    + ++ + +  G +P+ +TY  ++    +
Sbjct: 43  LRKRKRMVRRLSTRLLNVCIASFCKAHKLEKAESVIIDGIRLGVLPDGVTYNILIDAYCR 102

Query: 509 NKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRIEEANQCMGNMFRSGIDFDMVC 330
              ++ G  +   M   G + D  +Y ++     +  +I  +      M + GI  D+  
Sbjct: 103 LVGIDAGYSVLHRMGEAGISPDVISYNSLIAGATRNCQISRSFNLFDEMIQRGIAPDIWS 162

Query: 329 YNTLINLYCKEGKLQDAFK-FLDDAEKMGLECDIYTHTILIDGLCKAGNIQGARRHLKYL 153
           YNTL++ + K GK  +A + F D      L C + T  I+++GLCK G  + A    + L
Sbjct: 163 YNTLMHGFFKLGKPDEANRVFRDIILVEHLPC-VATFNIMMNGLCKNGYTENAFMLFRNL 221

Query: 152 NKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVF----ESMKAKDEFTYSSIVQ 9
            + GF   L  +N  + GLCK+G++  AM++F    ES    +  TY+ +++
Sbjct: 222 QRHGFVPELMTYNILVSGLCKIGRLGLAMRIFKEIVESGHVPNAITYTPVLR 273


>gb|KDO79612.1| hypothetical protein CISIN_1g012782mg [Citrus sinensis]
          Length = 410

 Score =  340 bits (872), Expect = 6e-91
 Identities = 162/250 (64%), Positives = 193/250 (77%)
 Frame = -3

Query: 752 TFNIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEI 573
           TFNIML GLCKNRYTDNAL + R LQ+HGF PELVTYNILI GLCK+ + RT + +LKE+
Sbjct: 103 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162

Query: 572 LDYGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRI 393
            D GH PNAITYTT+MKCCF+N+    GLEI S MK KGYTFDGF YCTV  A +K GR+
Sbjct: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222

Query: 392 EEANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTIL 213
           +EA   M  M   G+  D+V YNTLINLYCKEGKL+ A+  LD+ EK G ECD YTHTIL
Sbjct: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282

Query: 212 IDGLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAKDE 33
           IDGLCKAGNI+GAR HL+Y+NK+GF +NL A+N  +  L K G+I++A+ VFESM+ KD 
Sbjct: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS 342

Query: 32  FTYSSIVQGL 3
           FTYSS+V  L
Sbjct: 343 FTYSSMVHNL 352



 Score = 87.8 bits (216), Expect = 7e-15
 Identities = 53/213 (24%), Positives = 103/213 (48%), Gaps = 4/213 (1%)
 Frame = -3

Query: 638 ILIDGLCKSRKWRTVKGLLKEILDYGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLK 459
           +LID  C+   +     +L  + + G  P+ +TY +++    +N +L+  L++  EM   
Sbjct: 1   MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60

Query: 458 GYTFDGFAYCTVAGALLKAGRIEEANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDA 279
           G   D ++Y ++   L + G+ +EAN+   +M    +      +N ++N  CK     +A
Sbjct: 61  GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120

Query: 278 FKFLDDAEKMGLECDIYTHTILIDGLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHG 99
            +     +K G   ++ T+ ILI GLCKAG ++ AR  LK L   G   N   + + +  
Sbjct: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180

Query: 98  LCKLGQIEYAMQVFESMKAK----DEFTYSSIV 12
             +  + +  +++  +MK K    D F Y +++
Sbjct: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 213


>ref|XP_006450549.1| hypothetical protein CICLE_v10008244mg [Citrus clementina]
           gi|557553775|gb|ESR63789.1| hypothetical protein
           CICLE_v10008244mg [Citrus clementina]
           gi|641860925|gb|KDO79613.1| hypothetical protein
           CISIN_1g012782mg [Citrus sinensis]
          Length = 319

 Score =  340 bits (872), Expect = 6e-91
 Identities = 162/250 (64%), Positives = 193/250 (77%)
 Frame = -3

Query: 752 TFNIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEI 573
           TFNIML GLCKNRYTDNAL + R LQ+HGF PELVTYNILI GLCK+ + RT + +LKE+
Sbjct: 12  TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 71

Query: 572 LDYGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRI 393
            D GH PNAITYTT+MKCCF+N+    GLEI S MK KGYTFDGF YCTV  A +K GR+
Sbjct: 72  GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 131

Query: 392 EEANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTIL 213
           +EA   M  M   G+  D+V YNTLINLYCKEGKL+ A+  LD+ EK G ECD YTHTIL
Sbjct: 132 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 191

Query: 212 IDGLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAKDE 33
           IDGLCKAGNI+GAR HL+Y+NK+GF +NL A+N  +  L K G+I++A+ VFESM+ KD 
Sbjct: 192 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS 251

Query: 32  FTYSSIVQGL 3
           FTYSS+V  L
Sbjct: 252 FTYSSMVHNL 261


>ref|XP_006450548.1| hypothetical protein CICLE_v10008244mg [Citrus clementina]
           gi|568844658|ref|XP_006476201.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At4g17915-like isoform X1 [Citrus sinensis]
           gi|568844660|ref|XP_006476202.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At4g17915-like isoform X2 [Citrus sinensis]
           gi|568844662|ref|XP_006476203.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At4g17915-like isoform X3 [Citrus sinensis]
           gi|557553774|gb|ESR63788.1| hypothetical protein
           CICLE_v10008244mg [Citrus clementina]
           gi|641860921|gb|KDO79609.1| hypothetical protein
           CISIN_1g012782mg [Citrus sinensis]
           gi|641860922|gb|KDO79610.1| hypothetical protein
           CISIN_1g012782mg [Citrus sinensis]
           gi|641860923|gb|KDO79611.1| hypothetical protein
           CISIN_1g012782mg [Citrus sinensis]
          Length = 456

 Score =  340 bits (872), Expect = 6e-91
 Identities = 162/250 (64%), Positives = 193/250 (77%)
 Frame = -3

Query: 752 TFNIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEI 573
           TFNIML GLCKNRYTDNAL + R LQ+HGF PELVTYNILI GLCK+ + RT + +LKE+
Sbjct: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208

Query: 572 LDYGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRI 393
            D GH PNAITYTT+MKCCF+N+    GLEI S MK KGYTFDGF YCTV  A +K GR+
Sbjct: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268

Query: 392 EEANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTIL 213
           +EA   M  M   G+  D+V YNTLINLYCKEGKL+ A+  LD+ EK G ECD YTHTIL
Sbjct: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328

Query: 212 IDGLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAKDE 33
           IDGLCKAGNI+GAR HL+Y+NK+GF +NL A+N  +  L K G+I++A+ VFESM+ KD 
Sbjct: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS 388

Query: 32  FTYSSIVQGL 3
           FTYSS+V  L
Sbjct: 389 FTYSSMVHNL 398



 Score =  107 bits (266), Expect = 1e-20
 Identities = 65/249 (26%), Positives = 122/249 (48%), Gaps = 4/249 (1%)
 Frame = -3

Query: 746 NIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEILD 567
           NI +   CK    + A  ++ +  R G  P++VTYN+LID  C+   +     +L  + +
Sbjct: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70

Query: 566 YGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRIEE 387
            G  P+ +TY +++    +N +L+  L++  EM   G   D ++Y ++   L + G+ +E
Sbjct: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130

Query: 386 ANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTILID 207
           AN+   +M    +      +N ++N  CK     +A +     +K G   ++ T+ ILI 
Sbjct: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190

Query: 206 GLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAK---- 39
           GLCKAG ++ AR  LK L   G   N   + + +    +  + +  +++  +MK K    
Sbjct: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250

Query: 38  DEFTYSSIV 12
           D F Y +++
Sbjct: 251 DGFGYCTVI 259


>ref|XP_009593769.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915 [Nicotiana tomentosiformis]
           gi|697169740|ref|XP_009593770.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein At4g17915
           [Nicotiana tomentosiformis]
           gi|697169742|ref|XP_009593771.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein At4g17915
           [Nicotiana tomentosiformis]
           gi|697169744|ref|XP_009593772.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein At4g17915
           [Nicotiana tomentosiformis]
           gi|697169746|ref|XP_009593773.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein At4g17915
           [Nicotiana tomentosiformis]
           gi|697169748|ref|XP_009593774.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein At4g17915
           [Nicotiana tomentosiformis]
           gi|697169750|ref|XP_009593776.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein At4g17915
           [Nicotiana tomentosiformis]
           gi|697169752|ref|XP_009593777.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein At4g17915
           [Nicotiana tomentosiformis]
          Length = 460

 Score =  338 bits (867), Expect = 2e-90
 Identities = 157/250 (62%), Positives = 199/250 (79%)
 Frame = -3

Query: 752 TFNIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEI 573
           TFNI++ GLCKN YT+NALML R+L+RHGF P+LVTYNILI GLCKS + +T K  L E+
Sbjct: 152 TFNILMNGLCKNGYTENALMLFRSLKRHGFTPQLVTYNILIHGLCKSGRGKTAKEFLNEL 211

Query: 572 LDYGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRI 393
           ++ GHIPNAITYTTVMKCCF+ +   EGL+IF+EM+ KGYT+D FAYCTVA  LLK GR+
Sbjct: 212 VEAGHIPNAITYTTVMKCCFRCRQFEEGLKIFAEMRRKGYTYDAFAYCTVASMLLKTGRM 271

Query: 392 EEANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTIL 213
            EAN+ +G +  +G D D V +N +INLYCKEG+L +A+K L +AEK GLE D YTHTIL
Sbjct: 272 NEANEYLGYIITNGFDLDTVSFNNIINLYCKEGQLDNAYKLLYEAEKKGLESDKYTHTIL 331

Query: 212 IDGLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAKDE 33
           IDGLC+ GN + A++HL  ++ MGF +NL A NSFI+GLCK G +++A+Q+FESM AKD 
Sbjct: 332 IDGLCRTGNFKEAQQHLDCMSMMGFDSNLVALNSFINGLCKAGHLDHALQMFESMDAKDS 391

Query: 32  FTYSSIVQGL 3
           FTYS+IV GL
Sbjct: 392 FTYSTIVHGL 401



 Score =  100 bits (248), Expect = 1e-18
 Identities = 69/289 (23%), Positives = 127/289 (43%), Gaps = 39/289 (13%)
 Frame = -3

Query: 752 TFNIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEI 573
           T+N ++   C+    D    +L  ++  G  P+++TYN LI G  +         L  E+
Sbjct: 47  TYNTVIAAYCRFVGIDAGYSILYRMKEAGISPDVITYNSLIAGATRYCMLSRCLDLFDEM 106

Query: 572 LDYGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRI 393
           L+   +P+  +Y T+M C FK +  +E   +F ++ LK  +     +  +   L K G  
Sbjct: 107 LEMSILPDIWSYNTLMHCFFKLRKPDEAYRVFQDIILKDISLHPATFNILMNGLCKNGYT 166

Query: 392 EEANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMG----------- 246
           E A     ++ R G    +V YN LI+  CK G+ + A +FL++  + G           
Sbjct: 167 ENALMLFRSLKRHGFTPQLVTYNILIHGLCKSGRGKTAKEFLNELVEAGHIPNAITYTTV 226

Query: 245 LEC------------------------DIYTHTILIDGLCKAGNIQGARRHLKYLNKMGF 138
           ++C                        D + +  +   L K G +  A  +L Y+   GF
Sbjct: 227 MKCCFRCRQFEEGLKIFAEMRRKGYTYDAFAYCTVASMLLKTGRMNEANEYLGYIITNGF 286

Query: 137 GTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAK----DEFTYSSIVQGL 3
             +  +FN+ I+  CK GQ++ A ++    + K    D++T++ ++ GL
Sbjct: 287 DLDTVSFNNIINLYCKEGQLDNAYKLLYEAEKKGLESDKYTHTILIDGL 335



 Score = 99.4 bits (246), Expect = 2e-18
 Identities = 66/252 (26%), Positives = 117/252 (46%), Gaps = 4/252 (1%)
 Frame = -3

Query: 746 NIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEILD 567
           NI +  LCK +  + A  +L +  R G +P++VTYN +I   C+         +L  + +
Sbjct: 14  NICIASLCKAKQLEKAEAVLVDGIRIGVQPDVVTYNTVIAAYCRFVGIDAGYSILYRMKE 73

Query: 566 YGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRIEE 387
            G  P+ ITY +++    +  ML+  L++F EM       D ++Y T+     K  + +E
Sbjct: 74  AGISPDVITYNSLIAGATRYCMLSRCLDLFDEMLEMSILPDIWSYNTLMHCFFKLRKPDE 133

Query: 386 ANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTILID 207
           A +   ++    I      +N L+N  CK G  ++A       ++ G    + T+ ILI 
Sbjct: 134 AYRVFQDIILKDISLHPATFNILMNGLCKNGYTENALMLFRSLKRHGFTPQLVTYNILIH 193

Query: 206 GLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAK---- 39
           GLCK+G  + A+  L  L + G   N   + + +    +  Q E  +++F  M+ K    
Sbjct: 194 GLCKSGRGKTAKEFLNELVEAGHIPNAITYTTVMKCCFRCRQFEEGLKIFAEMRRKGYTY 253

Query: 38  DEFTYSSIVQGL 3
           D F Y ++   L
Sbjct: 254 DAFAYCTVASML 265


>ref|XP_008364749.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46680-like [Malus domestica]
          Length = 457

 Score =  337 bits (864), Expect = 5e-90
 Identities = 159/250 (63%), Positives = 191/250 (76%)
 Frame = -3

Query: 752 TFNIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEI 573
           TFNIM+ GLCKN Y DNALML RNLQRHGF P LVTYNILI GLCK+R+    + +LKE+
Sbjct: 150 TFNIMINGLCKNEYIDNALMLFRNLQRHGFVPRLVTYNILIHGLCKARRLGQARKMLKEL 209

Query: 572 LDYGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRI 393
            + G+ PNAITYTTVMKCCFK K  +E LEI SEMK KGYTFDGFA CTV  AL+K GRI
Sbjct: 210 GESGYXPNAITYTTVMKCCFKFKQYDEALEIMSEMKSKGYTFDGFANCTVVAALVKTGRI 269

Query: 392 EEANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTIL 213
           EEAN CM    R+GI+ D+  YNTL+N+YC+EGK + A+K +D+ E  GL CD YTHTI+
Sbjct: 270 EEANACMEQTMRNGIELDLAAYNTLLNMYCREGKFEAAYKLMDEIENGGLRCDKYTHTII 329

Query: 212 IDGLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAKDE 33
           IDGLCKAGNI GA +HL+Y+  +GF  NL A N  I GLCK GQI+ AM +++SM+ KD 
Sbjct: 330 IDGLCKAGNIIGAEQHLQYMKMIGFRENLVAXNCMIDGLCKAGQIDRAMDLYKSMETKDS 389

Query: 32  FTYSSIVQGL 3
           FTY+S+V  L
Sbjct: 390 FTYTSLVHNL 399



 Score =  107 bits (268), Expect = 7e-21
 Identities = 65/252 (25%), Positives = 124/252 (49%), Gaps = 4/252 (1%)
 Frame = -3

Query: 746 NIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEILD 567
           NI +   CK+R  + A  ++ +  R G  P++VTYN L++   +     +   ++  + +
Sbjct: 12  NICIASFCKSRLLERAEAVIIDGIRLGVIPDVVTYNTLLNAYSRFVSLDSAYSVVHRMKE 71

Query: 566 YGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRIEE 387
            G  P+ ITY +++    +N +L++ L++F EM   G   + ++Y  +     K G+ +E
Sbjct: 72  AGISPDVITYNSLLSGATRNCLLSQSLDLFEEMLQAGIHPNVWSYNILMHCFFKLGKPDE 131

Query: 386 ANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTILID 207
           AN+   ++    +      +N +IN  CK   + +A     + ++ G    + T+ ILI 
Sbjct: 132 ANRVFQDILLRNLTPHPATFNIMINGLCKNEYIDNALMLFRNLQRHGFVPRLVTYNILIH 191

Query: 206 GLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAK---- 39
           GLCKA  +  AR+ LK L + G+  N   + + +    K  Q + A+++   MK+K    
Sbjct: 192 GLCKARRLGQARKMLKELGESGYXPNAITYTTVMKCCFKFKQYDEALEIMSEMKSKGYTF 251

Query: 38  DEFTYSSIVQGL 3
           D F   ++V  L
Sbjct: 252 DGFANCTVVAAL 263



 Score = 89.0 bits (219), Expect = 3e-15
 Identities = 69/289 (23%), Positives = 126/289 (43%), Gaps = 39/289 (13%)
 Frame = -3

Query: 752 TFNIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEI 573
           T+N +L    +    D+A  ++  ++  G  P+++TYN L+ G  ++        L +E+
Sbjct: 45  TYNTLLNAYSRFVSLDSAYSVVHRMKEAGISPDVITYNSLLSGATRNCLLSQSLDLFEEM 104

Query: 572 LDYGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRI 393
           L  G  PN  +Y  +M C FK    +E   +F ++ L+  T     +  +   L K   I
Sbjct: 105 LQAGIHPNVWSYNILMHCFFKLGKPDEANRVFQDILLRNLTPHPATFNIMINGLCKNEYI 164

Query: 392 EEANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTIL 213
           + A     N+ R G    +V YN LI+  CK  +L  A K L +  + G   +  T+T +
Sbjct: 165 DNALMLFRNLQRHGFVPRLVTYNILIHGLCKARRLGQARKMLKELGESGYXPNAITYTTV 224

Query: 212 I--------------------------DG---------LCKAGNIQGARRHLKYLNKMGF 138
           +                          DG         L K G I+ A   ++   + G 
Sbjct: 225 MKCCFKFKQYDEALEIMSEMKSKGYTFDGFANCTVVAALVKTGRIEEANACMEQTMRNGI 284

Query: 137 GTNLAAFNSFIHGLCKLGQIEYAMQVFESMK----AKDEFTYSSIVQGL 3
             +LAA+N+ ++  C+ G+ E A ++ + ++      D++T++ I+ GL
Sbjct: 285 ELDLAAYNTLLNMYCREGKFEAAYKLMDEIENGGLRCDKYTHTIIIDGL 333


>ref|XP_012464405.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915 isoform X1 [Gossypium raimondii]
           gi|763815387|gb|KJB82239.1| hypothetical protein
           B456_013G183800 [Gossypium raimondii]
          Length = 456

 Score =  336 bits (862), Expect = 9e-90
 Identities = 154/250 (61%), Positives = 200/250 (80%)
 Frame = -3

Query: 752 TFNIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEI 573
           TFNIM+ GLCKN YT+NA ML RNLQRHGF PEL+TYNIL+ GLCK  +  + + +LKEI
Sbjct: 148 TFNIMMNGLCKNGYTENAFMLFRNLQRHGFVPELLTYNILVSGLCKIGRLGSARRVLKEI 207

Query: 572 LDYGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRI 393
           ++ GH+PNAITYTT++KC F+ K   EG+E+  EMK KGYTFDGFAYCTV GAL K G++
Sbjct: 208 VESGHVPNAITYTTLLKCFFRKKKFEEGIELLLEMKSKGYTFDGFAYCTVIGALTKIGKV 267

Query: 392 EEANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTIL 213
           ++A + M +M   GI+ D+V YNTLINLYCK G+L++A+K LD+ EK GLECD YTHTI+
Sbjct: 268 KQATEFMVDMIEIGIELDIVSYNTLINLYCKTGELEEAYKLLDEIEKKGLECDKYTHTIM 327

Query: 212 IDGLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAKDE 33
           IDGL +AGNI+GA +HLKY+N MGF +NL A+N  + GLCK+GQI+ A++V++SM+ +D 
Sbjct: 328 IDGLRRAGNIEGAAQHLKYMNMMGFDSNLVAYNCLVDGLCKVGQIDDAIKVYKSMEVRDS 387

Query: 32  FTYSSIVQGL 3
           FTYSS+V  L
Sbjct: 388 FTYSSLVYNL 397



 Score =  102 bits (254), Expect = 3e-19
 Identities = 63/252 (25%), Positives = 122/252 (48%), Gaps = 4/252 (1%)
 Frame = -3

Query: 746 NIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEILD 567
           N+ +  LCK    + A  ++ +  R G  P++VTYNILID  C          +L  + +
Sbjct: 11  NVCIASLCKAHKLEKAESVIIDGIRLGVLPDVVTYNILIDAYC-CFGIDAGYAILHRMRE 69

Query: 566 YGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRIEE 387
               P+ I+Y +++    +N+ +    ++  EM  +G   D ++Y  +   L K G+ + 
Sbjct: 70  ADVTPDIISYNSLIAGATRNRQIARSFDLLDEMIQRGIAPDVWSYNILMHGLFKLGKPDL 129

Query: 386 ANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTILID 207
           AN+   ++  +     +  +N ++N  CK G  ++AF    + ++ G   ++ T+ IL+ 
Sbjct: 130 ANRIFKDIILAEYSPSIATFNIMMNGLCKNGYTENAFMLFRNLQRHGFVPELLTYNILVS 189

Query: 206 GLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAK---- 39
           GLCK G +  ARR LK + + G   N   + + +    +  + E  +++   MK+K    
Sbjct: 190 GLCKIGRLGSARRVLKEIVESGHVPNAITYTTLLKCFFRKKKFEEGIELLLEMKSKGYTF 249

Query: 38  DEFTYSSIVQGL 3
           D F Y +++  L
Sbjct: 250 DGFAYCTVIGAL 261



 Score = 85.1 bits (209), Expect = 5e-14
 Identities = 60/289 (20%), Positives = 128/289 (44%), Gaps = 39/289 (13%)
 Frame = -3

Query: 752 TFNIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEI 573
           T+NI++   C     D    +L  ++     P++++YN LI G  ++R+      LL E+
Sbjct: 44  TYNILIDAYCCFGI-DAGYAILHRMREADVTPDIISYNSLIAGATRNRQIARSFDLLDEM 102

Query: 572 LDYGHIPNAITYTTVMKCCFK--------------------------NKMLN-------- 495
           +  G  P+  +Y  +M   FK                          N M+N        
Sbjct: 103 IQRGIAPDVWSYNILMHGLFKLGKPDLANRIFKDIILAEYSPSIATFNIMMNGLCKNGYT 162

Query: 494 -EGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRIEEANQCMGNMFRSGIDFDMVCYNTL 318
                +F  ++  G+  +   Y  +   L K GR+  A + +  +  SG   + + Y TL
Sbjct: 163 ENAFMLFRNLQRHGFVPELLTYNILVSGLCKIGRLGSARRVLKEIVESGHVPNAITYTTL 222

Query: 317 INLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTILIDGLCKAGNIQGARRHLKYLNKMGF 138
           +  + ++ K ++  + L + +  G   D + +  +I  L K G ++ A   +  + ++G 
Sbjct: 223 LKCFFRKKKFEEGIELLLEMKSKGYTFDGFAYCTVIGALTKIGKVKQATEFMVDMIEIGI 282

Query: 137 GTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAK----DEFTYSSIVQGL 3
             ++ ++N+ I+  CK G++E A ++ + ++ K    D++T++ ++ GL
Sbjct: 283 ELDIVSYNTLINLYCKTGELEEAYKLLDEIEKKGLECDKYTHTIMIDGL 331


>ref|XP_008369674.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46680
           [Malus domestica]
          Length = 457

 Score =  336 bits (862), Expect = 9e-90
 Identities = 159/250 (63%), Positives = 191/250 (76%)
 Frame = -3

Query: 752 TFNIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEI 573
           TFNIM+ GLCKN Y DNALML RNLQRHGF P LVTYNILI GLCK+R+    + +LKE+
Sbjct: 150 TFNIMINGLCKNEYIDNALMLFRNLQRHGFVPRLVTYNILIHGLCKARRLGQARKMLKEL 209

Query: 572 LDYGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRI 393
            + G+ PNAITYTTVMKCCFK K  +E LEI SEMK KGYTFDGFA CTV  AL+K GRI
Sbjct: 210 GESGYKPNAITYTTVMKCCFKFKQYDEALEIMSEMKSKGYTFDGFANCTVVAALVKTGRI 269

Query: 392 EEANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTIL 213
           EEAN CM    R+GI+ D+  YNTL+N+YC+EGK + A+K +D+ E  GL CD YTHTI+
Sbjct: 270 EEANACMEQTMRNGIELDLAAYNTLLNMYCREGKFEAAYKLMDEIENGGLRCDKYTHTII 329

Query: 212 IDGLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAKDE 33
           IDGLCKAGNI GA +HL+Y+  +GF  NL A N  I GLCK GQI+ AM +++SM+ KD 
Sbjct: 330 IDGLCKAGNIIGAEQHLQYMKMIGFRENLVAXNCMIDGLCKAGQIDRAMDLYKSMETKDS 389

Query: 32  FTYSSIVQGL 3
           FTY+S+V  L
Sbjct: 390 FTYTSLVHNL 399



 Score =  107 bits (267), Expect = 9e-21
 Identities = 65/252 (25%), Positives = 124/252 (49%), Gaps = 4/252 (1%)
 Frame = -3

Query: 746 NIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEILD 567
           NI +   CK+R  + A  ++ +  R G  P++VTYN L++   +     +   ++  + +
Sbjct: 12  NICIASFCKSRLLERAEAVIIDGIRLGVIPDVVTYNTLLNAYSRFVSLDSAYSVVHRMKE 71

Query: 566 YGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRIEE 387
            G  P+ ITY +++    +N +L++ L++F EM   G   + ++Y  +     K G+ +E
Sbjct: 72  AGISPDVITYNSLLSGATRNCLLSQSLDLFEEMLQAGIHPNVWSYNILMHCFFKLGKPDE 131

Query: 386 ANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTILID 207
           AN+   ++    +      +N +IN  CK   + +A     + ++ G    + T+ ILI 
Sbjct: 132 ANRVFQDILLRNLTPHPATFNIMINGLCKNEYIDNALMLFRNLQRHGFVPRLVTYNILIH 191

Query: 206 GLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAK---- 39
           GLCKA  +  AR+ LK L + G+  N   + + +    K  Q + A+++   MK+K    
Sbjct: 192 GLCKARRLGQARKMLKELGESGYKPNAITYTTVMKCCFKFKQYDEALEIMSEMKSKGYTF 251

Query: 38  DEFTYSSIVQGL 3
           D F   ++V  L
Sbjct: 252 DGFANCTVVAAL 263



 Score = 89.7 bits (221), Expect = 2e-15
 Identities = 69/289 (23%), Positives = 127/289 (43%), Gaps = 39/289 (13%)
 Frame = -3

Query: 752 TFNIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEI 573
           T+N +L    +    D+A  ++  ++  G  P+++TYN L+ G  ++        L +E+
Sbjct: 45  TYNTLLNAYSRFVSLDSAYSVVHRMKEAGISPDVITYNSLLSGATRNCLLSQSLDLFEEM 104

Query: 572 LDYGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRI 393
           L  G  PN  +Y  +M C FK    +E   +F ++ L+  T     +  +   L K   I
Sbjct: 105 LQAGIHPNVWSYNILMHCFFKLGKPDEANRVFQDILLRNLTPHPATFNIMINGLCKNEYI 164

Query: 392 EEANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTIL 213
           + A     N+ R G    +V YN LI+  CK  +L  A K L +  + G + +  T+T +
Sbjct: 165 DNALMLFRNLQRHGFVPRLVTYNILIHGLCKARRLGQARKMLKELGESGYKPNAITYTTV 224

Query: 212 I--------------------------DG---------LCKAGNIQGARRHLKYLNKMGF 138
           +                          DG         L K G I+ A   ++   + G 
Sbjct: 225 MKCCFKFKQYDEALEIMSEMKSKGYTFDGFANCTVVAALVKTGRIEEANACMEQTMRNGI 284

Query: 137 GTNLAAFNSFIHGLCKLGQIEYAMQVFESMK----AKDEFTYSSIVQGL 3
             +LAA+N+ ++  C+ G+ E A ++ + ++      D++T++ I+ GL
Sbjct: 285 ELDLAAYNTLLNMYCREGKFEAAYKLMDEIENGGLRCDKYTHTIIIDGL 333


>ref|XP_012453674.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915 [Gossypium raimondii]
           gi|823241953|ref|XP_012453675.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein At4g17915
           [Gossypium raimondii] gi|823241955|ref|XP_012453676.1|
           PREDICTED: putative pentatricopeptide repeat-containing
           protein At4g17915 [Gossypium raimondii]
           gi|823241957|ref|XP_012453677.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein At4g17915
           [Gossypium raimondii] gi|823241959|ref|XP_012453678.1|
           PREDICTED: putative pentatricopeptide repeat-containing
           protein At4g17915 [Gossypium raimondii]
           gi|763807541|gb|KJB74479.1| hypothetical protein
           B456_011G295800 [Gossypium raimondii]
          Length = 456

 Score =  336 bits (861), Expect = 1e-89
 Identities = 154/250 (61%), Positives = 198/250 (79%)
 Frame = -3

Query: 752 TFNIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEI 573
           TFNIM+ GLCKN YT NA ML RNLQRHGF PEL+TYNIL+ GLCK  +  + + +LKEI
Sbjct: 148 TFNIMMNGLCKNGYTMNAFMLFRNLQRHGFVPELLTYNILVSGLCKIGRLGSARRVLKEI 207

Query: 572 LDYGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRI 393
           ++ GH+PNAITYTTV+KC F+ K   EG+E+  EMK KGYTFDGFAYCTV GAL K G++
Sbjct: 208 VESGHVPNAITYTTVLKCIFRKKKFEEGIELLLEMKSKGYTFDGFAYCTVIGALTKIGKV 267

Query: 392 EEANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTIL 213
           ++A + M +M  +GI+ D+V YNTLINLYCK G+L++A+K LD+ EK GLECD YTHTI+
Sbjct: 268 KQATEFMVDMIETGIELDIVSYNTLINLYCKTGELEEAYKLLDEIEKKGLECDKYTHTIM 327

Query: 212 IDGLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAKDE 33
           IDGLCKAG ++ A +HLKY+N MGF +NL A+N  + GLCK+GQI  A++V++SM+ +D 
Sbjct: 328 IDGLCKAGKVEVAAQHLKYMNMMGFDSNLVAYNCLVDGLCKVGQINDAIKVYKSMEVRDS 387

Query: 32  FTYSSIVQGL 3
           FTYSS+V  L
Sbjct: 388 FTYSSLVYNL 397



 Score =  103 bits (256), Expect = 2e-19
 Identities = 63/252 (25%), Positives = 123/252 (48%), Gaps = 4/252 (1%)
 Frame = -3

Query: 746 NIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEILD 567
           N+ +  LCK    + A  ++ +  R G  P++VTYN LID  C          +L  + +
Sbjct: 11  NVCIASLCKAHNLEKAESVIIDGIRLGVLPDVVTYNTLIDAYCHFGI-DAGYAILHRMRE 69

Query: 566 YGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRIEE 387
            G  P+ I+Y +++    +N  ++   ++F EM  +G   D ++Y  +     K G+ +E
Sbjct: 70  AGVTPDIISYNSLIAGATRNHQISRSRDLFDEMIERGIVPDVWSYNILMHGFFKLGKPDE 129

Query: 386 ANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTILID 207
           A++   ++  +     +  +N ++N  CK G   +AF    + ++ G   ++ T+ IL+ 
Sbjct: 130 AHRVFKDIILAEHSPSIATFNIMMNGLCKNGYTMNAFMLFRNLQRHGFVPELLTYNILVS 189

Query: 206 GLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAK---- 39
           GLCK G +  ARR LK + + G   N   + + +  + +  + E  +++   MK+K    
Sbjct: 190 GLCKIGRLGSARRVLKEIVESGHVPNAITYTTVLKCIFRKKKFEEGIELLLEMKSKGYTF 249

Query: 38  DEFTYSSIVQGL 3
           D F Y +++  L
Sbjct: 250 DGFAYCTVIGAL 261


>ref|XP_008227583.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46680-like [Prunus mume]
           gi|645242516|ref|XP_008227584.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g46680-like [Prunus mume]
           gi|645242528|ref|XP_008227585.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g46680-like [Prunus mume]
           gi|645242530|ref|XP_008227586.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g46680-like [Prunus mume]
          Length = 457

 Score =  335 bits (858), Expect = 3e-89
 Identities = 156/250 (62%), Positives = 193/250 (77%)
 Frame = -3

Query: 752 TFNIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEI 573
           T NIM+ GLC N YTDNALML RNL+RHGF P+LVTYNILI+ LCK+R+ R  + +LKE+
Sbjct: 150 TLNIMINGLCNNGYTDNALMLYRNLRRHGFVPQLVTYNILINWLCKTRRLRQARRILKEL 209

Query: 572 LDYGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRI 393
            D GH PN ITYTTVMKCCF++   ++GLEI S M  KGYTFDG+AYCTV  AL+K GR+
Sbjct: 210 GDSGHEPNLITYTTVMKCCFRSNKYDKGLEIMSVMMGKGYTFDGYAYCTVVAALVKTGRV 269

Query: 392 EEANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTIL 213
           EEAN CM    R+GI+ D+V YNTL+N+YC+EGK + A+K LD+ E  GL CD YTHTI+
Sbjct: 270 EEANACMEQTIRNGIELDLVAYNTLLNMYCREGKFEAAYKLLDEMENGGLLCDKYTHTII 329

Query: 212 IDGLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAKDE 33
           IDGLCKAGNI GA++HL Y+  MGF  NL A N  I GLCK GQI+ AM++++SM+ KD 
Sbjct: 330 IDGLCKAGNISGAQKHLHYMKMMGFHENLVALNCMIDGLCKAGQIDRAMELYKSMETKDS 389

Query: 32  FTYSSIVQGL 3
           FTY+S+V  L
Sbjct: 390 FTYTSLVHNL 399



 Score =  102 bits (253), Expect = 4e-19
 Identities = 65/252 (25%), Positives = 116/252 (46%), Gaps = 4/252 (1%)
 Frame = -3

Query: 746 NIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEILD 567
           NI +   CK R  + A  ++ +  R G  P++VTYN L+    +         ++  + +
Sbjct: 12  NICIASFCKVRLLEKAEAIVIDGIRLGVIPDVVTYNTLVSAYSRFVSLDAAYSVIHRMKE 71

Query: 566 YGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRIEE 387
            G  PN ITY ++M    +N +L+  L++F EM L G   + ++Y  +     K G+ +E
Sbjct: 72  AGISPNVITYNSLMSGATQNCLLSRSLDLFEEMLLAGIHPNLWSYNILMHCFFKLGKPDE 131

Query: 386 ANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTILID 207
           AN+   ++  S +       N +IN  C  G   +A     +  + G    + T+ ILI+
Sbjct: 132 ANRVFQDILLSNLPPHPATLNIMINGLCNNGYTDNALMLYRNLRRHGFVPQLVTYNILIN 191

Query: 206 GLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAK---- 39
            LCK   ++ ARR LK L   G   NL  + + +    +  + +  +++   M  K    
Sbjct: 192 WLCKTRRLRQARRILKELGDSGHEPNLITYTTVMKCCFRSNKYDKGLEIMSVMMGKGYTF 251

Query: 38  DEFTYSSIVQGL 3
           D + Y ++V  L
Sbjct: 252 DGYAYCTVVAAL 263



 Score = 82.8 bits (203), Expect = 2e-13
 Identities = 66/289 (22%), Positives = 122/289 (42%), Gaps = 39/289 (13%)
 Frame = -3

Query: 752 TFNIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEI 573
           T+N +++   +    D A  ++  ++  G  P ++TYN L+ G  ++        L +E+
Sbjct: 45  TYNTLVSAYSRFVSLDAAYSVIHRMKEAGISPNVITYNSLMSGATQNCLLSRSLDLFEEM 104

Query: 572 LDYGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRI 393
           L  G  PN  +Y  +M C FK    +E   +F ++ L            +   L   G  
Sbjct: 105 LLAGIHPNLWSYNILMHCFFKLGKPDEANRVFQDILLSNLPPHPATLNIMINGLCNNGYT 164

Query: 392 EEANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTIL 213
           + A     N+ R G    +V YN LIN  CK  +L+ A + L +    G E ++ T+T +
Sbjct: 165 DNALMLYRNLRRHGFVPQLVTYNILINWLCKTRRLRQARRILKELGDSGHEPNLITYTTV 224

Query: 212 I--------------------------DG---------LCKAGNIQGARRHLKYLNKMGF 138
           +                          DG         L K G ++ A   ++   + G 
Sbjct: 225 MKCCFRSNKYDKGLEIMSVMMGKGYTFDGYAYCTVVAALVKTGRVEEANACMEQTIRNGI 284

Query: 137 GTNLAAFNSFIHGLCKLGQIEYAMQVFESMK----AKDEFTYSSIVQGL 3
             +L A+N+ ++  C+ G+ E A ++ + M+      D++T++ I+ GL
Sbjct: 285 ELDLVAYNTLLNMYCREGKFEAAYKLLDEMENGGLLCDKYTHTIIIDGL 333



 Score = 61.2 bits (147), Expect = 7e-07
 Identities = 46/191 (24%), Positives = 87/191 (45%)
 Frame = -3

Query: 740 MLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEILDYG 561
           ++  L K    + A   +    R+G   +LV YN L++  C+  K+     LL E+ + G
Sbjct: 259 VVAALVKTGRVEEANACMEQTIRNGIELDLVAYNTLLNMYCREGKFEAAYKLLDEMENGG 318

Query: 560 HIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRIEEAN 381
            + +  T+T ++    K   ++   +    MK+ G+  +  A   +   L KAG+I+ A 
Sbjct: 319 LLCDKYTHTIIIDGLCKAGNISGAQKHLHYMKMMGFHENLVALNCMIDGLCKAGQIDRAM 378

Query: 380 QCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTILIDGL 201
           +    +++S    D   Y +L++  CK G+ + A K +    + G +    T   + DGL
Sbjct: 379 E----LYKSMETKDSFTYTSLVHNLCKAGRFRLASKLMMKCLRHGKKIPKATQRAVFDGL 434

Query: 200 CKAGNIQGARR 168
             +G    AR+
Sbjct: 435 YSSGFTDEARK 445


>ref|XP_007215356.1| hypothetical protein PRUPE_ppa005519mg [Prunus persica]
           gi|462411506|gb|EMJ16555.1| hypothetical protein
           PRUPE_ppa005519mg [Prunus persica]
          Length = 456

 Score =  334 bits (856), Expect = 4e-89
 Identities = 156/250 (62%), Positives = 193/250 (77%)
 Frame = -3

Query: 752 TFNIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEI 573
           TFNIM+ GLCKN Y DNALML RNLQRHGF P+LVTYNILI+GLCK+R+ R  + +L+E+
Sbjct: 149 TFNIMINGLCKNEYIDNALMLFRNLQRHGFVPQLVTYNILINGLCKARRLRQARTMLREL 208

Query: 572 LDYGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRI 393
            +    PNAITYTTVMKCCF++K  ++GL+I SEMK KGYTFD FAYCTV  AL+K GRI
Sbjct: 209 GESDLEPNAITYTTVMKCCFRSKQYDKGLDIMSEMKSKGYTFDSFAYCTVVAALVKTGRI 268

Query: 392 EEANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTIL 213
           EEAN CM  +  +GI+ D+  YNTL+N+YC+EGK + A+K LD+ EK GL CD YTHTI+
Sbjct: 269 EEANACMEQVMSNGIELDLAAYNTLLNMYCREGKFEAAYKLLDEIEKGGLLCDKYTHTII 328

Query: 212 IDGLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAKDE 33
           IDGLCKAGNI GA+ HL Y+  MGF  NL A N  I GLCK G I+ AM++++SM+ KD 
Sbjct: 329 IDGLCKAGNITGAQHHLHYMKMMGFHENLVALNCMIDGLCKAGHIDRAMELYKSMETKDS 388

Query: 32  FTYSSIVQGL 3
            TY+S+V  L
Sbjct: 389 VTYTSLVHNL 398



 Score =  105 bits (263), Expect = 3e-20
 Identities = 62/252 (24%), Positives = 121/252 (48%), Gaps = 4/252 (1%)
 Frame = -3

Query: 746 NIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEILD 567
           NI +   CK R  + A  ++ + +R G  P++VTYN L+    +         ++  + +
Sbjct: 11  NICIASFCKVRLLEKAEAIIIDGERLGVIPDVVTYNTLVSAYYRYVSLDAAYSVIHRMKE 70

Query: 566 YGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRIEE 387
            G  P+ +TY +++    ++ +L++ L++F EM   G   D ++Y  +     K G+ +E
Sbjct: 71  AGISPDVVTYNSLIAGSTRDCLLSQSLDLFEEMLQAGIHPDVWSYNILMNCFFKLGKPDE 130

Query: 386 ANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTILID 207
           AN+   ++  S +      +N +IN  CK   + +A     + ++ G    + T+ ILI+
Sbjct: 131 ANRVFQDILLSNLASHPATFNIMINGLCKNEYIDNALMLFRNLQRHGFVPQLVTYNILIN 190

Query: 206 GLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAK---- 39
           GLCKA  ++ AR  L+ L +     N   + + +    +  Q +  + +   MK+K    
Sbjct: 191 GLCKARRLRQARTMLRELGESDLEPNAITYTTVMKCCFRSKQYDKGLDIMSEMKSKGYTF 250

Query: 38  DEFTYSSIVQGL 3
           D F Y ++V  L
Sbjct: 251 DSFAYCTVVAAL 262



 Score = 86.3 bits (212), Expect = 2e-14
 Identities = 67/289 (23%), Positives = 122/289 (42%), Gaps = 39/289 (13%)
 Frame = -3

Query: 752 TFNIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEI 573
           T+N +++   +    D A  ++  ++  G  P++VTYN LI G  +         L +E+
Sbjct: 44  TYNTLVSAYYRYVSLDAAYSVIHRMKEAGISPDVVTYNSLIAGSTRDCLLSQSLDLFEEM 103

Query: 572 LDYGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRI 393
           L  G  P+  +Y  +M C FK    +E   +F ++ L         +  +   L K   I
Sbjct: 104 LQAGIHPDVWSYNILMNCFFKLGKPDEANRVFQDILLSNLASHPATFNIMINGLCKNEYI 163

Query: 392 EEANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHT-- 219
           + A     N+ R G    +V YN LIN  CK  +L+ A   L +  +  LE +  T+T  
Sbjct: 164 DNALMLFRNLQRHGFVPQLVTYNILINGLCKARRLRQARTMLRELGESDLEPNAITYTTV 223

Query: 218 ---------------------------------ILIDGLCKAGNIQGARRHLKYLNKMGF 138
                                             ++  L K G I+ A   ++ +   G 
Sbjct: 224 MKCCFRSKQYDKGLDIMSEMKSKGYTFDSFAYCTVVAALVKTGRIEEANACMEQVMSNGI 283

Query: 137 GTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAK----DEFTYSSIVQGL 3
             +LAA+N+ ++  C+ G+ E A ++ + ++      D++T++ I+ GL
Sbjct: 284 ELDLAAYNTLLNMYCREGKFEAAYKLLDEIEKGGLLCDKYTHTIIIDGL 332


>ref|XP_008228937.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915 [Prunus mume] gi|645245561|ref|XP_008228938.1|
           PREDICTED: putative pentatricopeptide repeat-containing
           protein At4g17915 [Prunus mume]
          Length = 457

 Score =  333 bits (855), Expect = 6e-89
 Identities = 155/250 (62%), Positives = 193/250 (77%)
 Frame = -3

Query: 752 TFNIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEI 573
           TFNIM+ GLCKN Y DNALML RNLQRHGF P+LVTYNILI+GLCK+R+ R  + +L+E+
Sbjct: 150 TFNIMINGLCKNEYIDNALMLFRNLQRHGFVPQLVTYNILINGLCKARRLRQARTMLREL 209

Query: 572 LDYGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRI 393
            +    PNAITYTTVMKCCF++K  ++GL+I SEMK KGYTFD FAYCT+  AL+K GRI
Sbjct: 210 GESDLEPNAITYTTVMKCCFRSKQYDKGLDIMSEMKSKGYTFDSFAYCTIVAALVKTGRI 269

Query: 392 EEANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTIL 213
           EEAN CM  +  +GI+ D+  YNTL+N+YC+EGK + A+K LD+ EK GL CD YTHTI+
Sbjct: 270 EEANACMEQVMSNGIELDLAAYNTLLNMYCREGKFEAAYKLLDEIEKGGLLCDKYTHTII 329

Query: 212 IDGLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAKDE 33
           IDGLCKAGNI GA+ HL Y+  MGF  NL A N  I GLCK G I+ AM++++SM+ KD 
Sbjct: 330 IDGLCKAGNITGAQHHLHYMKMMGFHENLVALNCMIDGLCKAGHIDRAMELYKSMETKDS 389

Query: 32  FTYSSIVQGL 3
            TY+S+V  L
Sbjct: 390 VTYTSLVHNL 399



 Score =  105 bits (263), Expect = 3e-20
 Identities = 64/252 (25%), Positives = 120/252 (47%), Gaps = 4/252 (1%)
 Frame = -3

Query: 746 NIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEILD 567
           NI +   CK R  + A  ++ +  R G  P++VTYN L+    +         ++  + +
Sbjct: 12  NICIASFCKVRLLEKAEAIIIDGVRLGVIPDVVTYNTLVSAYSRYVSLDAAYSVIHRMKE 71

Query: 566 YGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRIEE 387
            G  P+ ITY +++    ++ +L++ L++F EM   G   D ++Y  +     K G+ +E
Sbjct: 72  VGISPDVITYNSLIAGSTRDCLLSQSLDLFEEMLQAGIHPDVWSYNILMNCFFKLGKPDE 131

Query: 386 ANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTILID 207
           AN+   ++  S +      +N +IN  CK   + +A     + ++ G    + T+ ILI+
Sbjct: 132 ANRVFQDILLSNLASHPATFNIMINGLCKNEYIDNALMLFRNLQRHGFVPQLVTYNILIN 191

Query: 206 GLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAK---- 39
           GLCKA  ++ AR  L+ L +     N   + + +    +  Q +  + +   MK+K    
Sbjct: 192 GLCKARRLRQARTMLRELGESDLEPNAITYTTVMKCCFRSKQYDKGLDIMSEMKSKGYTF 251

Query: 38  DEFTYSSIVQGL 3
           D F Y +IV  L
Sbjct: 252 DSFAYCTIVAAL 263



 Score = 86.3 bits (212), Expect = 2e-14
 Identities = 66/289 (22%), Positives = 122/289 (42%), Gaps = 39/289 (13%)
 Frame = -3

Query: 752 TFNIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEI 573
           T+N +++   +    D A  ++  ++  G  P+++TYN LI G  +         L +E+
Sbjct: 45  TYNTLVSAYSRYVSLDAAYSVIHRMKEVGISPDVITYNSLIAGSTRDCLLSQSLDLFEEM 104

Query: 572 LDYGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRI 393
           L  G  P+  +Y  +M C FK    +E   +F ++ L         +  +   L K   I
Sbjct: 105 LQAGIHPDVWSYNILMNCFFKLGKPDEANRVFQDILLSNLASHPATFNIMINGLCKNEYI 164

Query: 392 EEANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHT-- 219
           + A     N+ R G    +V YN LIN  CK  +L+ A   L +  +  LE +  T+T  
Sbjct: 165 DNALMLFRNLQRHGFVPQLVTYNILINGLCKARRLRQARTMLRELGESDLEPNAITYTTV 224

Query: 218 ---------------------------------ILIDGLCKAGNIQGARRHLKYLNKMGF 138
                                             ++  L K G I+ A   ++ +   G 
Sbjct: 225 MKCCFRSKQYDKGLDIMSEMKSKGYTFDSFAYCTIVAALVKTGRIEEANACMEQVMSNGI 284

Query: 137 GTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAK----DEFTYSSIVQGL 3
             +LAA+N+ ++  C+ G+ E A ++ + ++      D++T++ I+ GL
Sbjct: 285 ELDLAAYNTLLNMYCREGKFEAAYKLLDEIEKGGLLCDKYTHTIIIDGL 333


>ref|XP_009790968.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915 [Nicotiana sylvestris]
           gi|698488763|ref|XP_009790969.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein At4g17915
           [Nicotiana sylvestris] gi|698488765|ref|XP_009790970.1|
           PREDICTED: putative pentatricopeptide repeat-containing
           protein At4g17915 [Nicotiana sylvestris]
           gi|698488768|ref|XP_009790971.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein At4g17915
           [Nicotiana sylvestris] gi|698488770|ref|XP_009790973.1|
           PREDICTED: putative pentatricopeptide repeat-containing
           protein At4g17915 [Nicotiana sylvestris]
          Length = 460

 Score =  331 bits (848), Expect = 4e-88
 Identities = 154/250 (61%), Positives = 198/250 (79%)
 Frame = -3

Query: 752 TFNIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEI 573
           TFNI++ GLCKN YT+NALML R+L+RHGF P+LVTYNILI GLCKS + +T K  L E+
Sbjct: 152 TFNILMNGLCKNGYTENALMLFRSLKRHGFTPQLVTYNILIHGLCKSGRGKTAKEFLNEL 211

Query: 572 LDYGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRI 393
           ++ GHIPNAITYTTVMKCCF+ +   EGL+IF+EM+ KGYT+D FAYCTVA  LLK GR+
Sbjct: 212 VEAGHIPNAITYTTVMKCCFRCRQFEEGLKIFAEMRRKGYTYDAFAYCTVASMLLKTGRM 271

Query: 392 EEANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTIL 213
            EAN+ +G +  +G D D V +N +INLY KEG+L +A+K L +AEK GL+ D YTHTIL
Sbjct: 272 NEANEYLGYIITNGFDLDTVSFNNIINLYYKEGQLDNAYKLLYEAEKKGLKSDKYTHTIL 331

Query: 212 IDGLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAKDE 33
           IDGLC+ GN + A++HL  ++ MGF +NL A NSFI+GLCK G +++A+++FESM AKD 
Sbjct: 332 IDGLCRTGNFKEAQQHLDCMSMMGFDSNLVALNSFINGLCKAGHLDHALRMFESMDAKDS 391

Query: 32  FTYSSIVQGL 3
           FTYS+IV GL
Sbjct: 392 FTYSTIVHGL 401



 Score = 98.6 bits (244), Expect = 4e-18
 Identities = 65/252 (25%), Positives = 117/252 (46%), Gaps = 4/252 (1%)
 Frame = -3

Query: 746 NIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEILD 567
           NI +  LCK +  + A  ++ +  R G +P++VTYN +I   C+         +L  + +
Sbjct: 14  NICIASLCKAKQLEKAESVIVDGIRIGVQPDVVTYNTVIAAYCRVVGIDAGYSILHRMKE 73

Query: 566 YGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRIEE 387
            G  P+ ITY +++    +  ML+  L++F EM       D ++Y T+     K  + +E
Sbjct: 74  AGINPDVITYNSLIAGATRYCMLSRCLDLFDEMLEMSILPDIWSYNTLMHCFFKLRKPDE 133

Query: 386 ANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTILID 207
           A +   ++    I      +N L+N  CK G  ++A       ++ G    + T+ ILI 
Sbjct: 134 AYRVFQDIILKDISLHPATFNILMNGLCKNGYTENALMLFRSLKRHGFTPQLVTYNILIH 193

Query: 206 GLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAK---- 39
           GLCK+G  + A+  L  L + G   N   + + +    +  Q E  +++F  M+ K    
Sbjct: 194 GLCKSGRGKTAKEFLNELVEAGHIPNAITYTTVMKCCFRCRQFEEGLKIFAEMRRKGYTY 253

Query: 38  DEFTYSSIVQGL 3
           D F Y ++   L
Sbjct: 254 DAFAYCTVASML 265



 Score = 97.1 bits (240), Expect = 1e-17
 Identities = 68/289 (23%), Positives = 126/289 (43%), Gaps = 39/289 (13%)
 Frame = -3

Query: 752 TFNIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEI 573
           T+N ++   C+    D    +L  ++  G  P+++TYN LI G  +         L  E+
Sbjct: 47  TYNTVIAAYCRVVGIDAGYSILHRMKEAGINPDVITYNSLIAGATRYCMLSRCLDLFDEM 106

Query: 572 LDYGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRI 393
           L+   +P+  +Y T+M C FK +  +E   +F ++ LK  +     +  +   L K G  
Sbjct: 107 LEMSILPDIWSYNTLMHCFFKLRKPDEAYRVFQDIILKDISLHPATFNILMNGLCKNGYT 166

Query: 392 EEANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMG----------- 246
           E A     ++ R G    +V YN LI+  CK G+ + A +FL++  + G           
Sbjct: 167 ENALMLFRSLKRHGFTPQLVTYNILIHGLCKSGRGKTAKEFLNELVEAGHIPNAITYTTV 226

Query: 245 LEC------------------------DIYTHTILIDGLCKAGNIQGARRHLKYLNKMGF 138
           ++C                        D + +  +   L K G +  A  +L Y+   GF
Sbjct: 227 MKCCFRCRQFEEGLKIFAEMRRKGYTYDAFAYCTVASMLLKTGRMNEANEYLGYIITNGF 286

Query: 137 GTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAK----DEFTYSSIVQGL 3
             +  +FN+ I+   K GQ++ A ++    + K    D++T++ ++ GL
Sbjct: 287 DLDTVSFNNIINLYYKEGQLDNAYKLLYEAEKKGLKSDKYTHTILIDGL 335


>ref|XP_010323680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915 isoform X2 [Solanum lycopersicum]
          Length = 402

 Score =  330 bits (847), Expect = 5e-88
 Identities = 150/250 (60%), Positives = 197/250 (78%)
 Frame = -3

Query: 752 TFNIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEI 573
           TFNI++ GLC N YT+NALML R+++RHGF P+L TYNILI GLCKS + +T +  L E+
Sbjct: 94  TFNILINGLCMNGYTENALMLFRSIKRHGFIPQLATYNILIHGLCKSGRGKTAREFLNEL 153

Query: 572 LDYGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRI 393
           ++ GHIPNAITYTTVMKCCFK +   EGL+IF+EM+ KGYT+D FAYCTVA  LLK G++
Sbjct: 154 VESGHIPNAITYTTVMKCCFKCEQFEEGLKIFAEMRRKGYTYDAFAYCTVASMLLKTGKM 213

Query: 392 EEANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTIL 213
            EAN+ +G +  +G D DMV +NT++NLYCKEG+L +A+K L +AEK GLE D YTHTI 
Sbjct: 214 NEANEYLGYIITNGFDLDMVSFNTIVNLYCKEGQLDNAYKLLHEAEKKGLESDKYTHTIF 273

Query: 212 IDGLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAKDE 33
           IDGLC+ GN + A++HL Y++ MGF +NL A NSFI+GLCK G +++A+++FESM AKD 
Sbjct: 274 IDGLCRTGNFKEAQQHLDYMSMMGFDSNLVALNSFINGLCKAGHLDHALRMFESMDAKDS 333

Query: 32  FTYSSIVQGL 3
            TYS++V  L
Sbjct: 334 ITYSTMVHSL 343



 Score = 87.8 bits (216), Expect = 7e-15
 Identities = 62/269 (23%), Positives = 117/269 (43%), Gaps = 39/269 (14%)
 Frame = -3

Query: 692 LLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEILDYGHIPNAITYTTVMKCCF 513
           +L  ++  G  P+ +TYN LI G  +         L +E+L+   +P+  +Y T+M C F
Sbjct: 9   VLYRMKEAGIYPDTITYNSLIAGATRYCMISRCFDLFEEMLEMSILPDIWSYNTLMHCFF 68

Query: 512 KNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRIEEANQCMGNMFRSGIDFDMV 333
           K +  +E   +F ++ LK  +     +  +   L   G  E A     ++ R G    + 
Sbjct: 69  KLRKPDEAYRVFQDILLKNISVHPATFNILINGLCMNGYTENALMLFRSIKRHGFIPQLA 128

Query: 332 CYNTLINLYCKEGKLQDAFKFLDDAEKMG-----------LEC----------------- 237
            YN LI+  CK G+ + A +FL++  + G           ++C                 
Sbjct: 129 TYNILIHGLCKSGRGKTAREFLNELVESGHIPNAITYTTVMKCCFKCEQFEEGLKIFAEM 188

Query: 236 -------DIYTHTILIDGLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQI 78
                  D + +  +   L K G +  A  +L Y+   GF  ++ +FN+ ++  CK GQ+
Sbjct: 189 RRKGYTYDAFAYCTVASMLLKTGKMNEANEYLGYIITNGFDLDMVSFNTIVNLYCKEGQL 248

Query: 77  EYAMQVFESMKAK----DEFTYSSIVQGL 3
           + A ++    + K    D++T++  + GL
Sbjct: 249 DNAYKLLHEAEKKGLESDKYTHTIFIDGL 277



 Score = 74.7 bits (182), Expect = 6e-11
 Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 6/205 (2%)
 Frame = -3

Query: 599 TVKG--LLKEILDYGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCT 426
           ++KG  +L  + + G  P+ ITY +++    +  M++   ++F EM       D ++Y T
Sbjct: 3   SIKGYSVLYRMKEAGIYPDTITYNSLIAGATRYCMISRCFDLFEEMLEMSILPDIWSYNT 62

Query: 425 VAGALLKAGRIEEANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMG 246
           +     K  + +EA +   ++    I      +N LIN  C  G  ++A       ++ G
Sbjct: 63  LMHCFFKLRKPDEAYRVFQDILLKNISVHPATFNILINGLCMNGYTENALMLFRSIKRHG 122

Query: 245 LECDIYTHTILIDGLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAM 66
               + T+ ILI GLCK+G  + AR  L  L + G   N   + + +    K  Q E  +
Sbjct: 123 FIPQLATYNILIHGLCKSGRGKTAREFLNELVESGHIPNAITYTTVMKCCFKCEQFEEGL 182

Query: 65  QVFESMKAK----DEFTYSSIVQGL 3
           ++F  M+ K    D F Y ++   L
Sbjct: 183 KIFAEMRRKGYTYDAFAYCTVASML 207


>ref|XP_004243786.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915 isoform X1 [Solanum lycopersicum]
           gi|723714891|ref|XP_010323676.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein At4g17915
           isoform X1 [Solanum lycopersicum]
           gi|723714894|ref|XP_010323677.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein At4g17915
           isoform X1 [Solanum lycopersicum]
           gi|723714899|ref|XP_010323678.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein At4g17915
           isoform X1 [Solanum lycopersicum]
           gi|723714902|ref|XP_010323679.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein At4g17915
           isoform X1 [Solanum lycopersicum]
          Length = 460

 Score =  330 bits (847), Expect = 5e-88
 Identities = 150/250 (60%), Positives = 197/250 (78%)
 Frame = -3

Query: 752 TFNIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEI 573
           TFNI++ GLC N YT+NALML R+++RHGF P+L TYNILI GLCKS + +T +  L E+
Sbjct: 152 TFNILINGLCMNGYTENALMLFRSIKRHGFIPQLATYNILIHGLCKSGRGKTAREFLNEL 211

Query: 572 LDYGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRI 393
           ++ GHIPNAITYTTVMKCCFK +   EGL+IF+EM+ KGYT+D FAYCTVA  LLK G++
Sbjct: 212 VESGHIPNAITYTTVMKCCFKCEQFEEGLKIFAEMRRKGYTYDAFAYCTVASMLLKTGKM 271

Query: 392 EEANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTIL 213
            EAN+ +G +  +G D DMV +NT++NLYCKEG+L +A+K L +AEK GLE D YTHTI 
Sbjct: 272 NEANEYLGYIITNGFDLDMVSFNTIVNLYCKEGQLDNAYKLLHEAEKKGLESDKYTHTIF 331

Query: 212 IDGLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAKDE 33
           IDGLC+ GN + A++HL Y++ MGF +NL A NSFI+GLCK G +++A+++FESM AKD 
Sbjct: 332 IDGLCRTGNFKEAQQHLDYMSMMGFDSNLVALNSFINGLCKAGHLDHALRMFESMDAKDS 391

Query: 32  FTYSSIVQGL 3
            TYS++V  L
Sbjct: 392 ITYSTMVHSL 401



 Score = 98.2 bits (243), Expect = 5e-18
 Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 4/252 (1%)
 Frame = -3

Query: 746 NIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEILD 567
           NI +  LCK +  + A +++ +  R G +P++VTYN LI   C+         +L  + +
Sbjct: 14  NICVASLCKAKQLEKAEVVIVDGIRIGVQPDVVTYNTLITAYCRFVGIDAGYSVLYRMKE 73

Query: 566 YGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRIEE 387
            G  P+ ITY +++    +  M++   ++F EM       D ++Y T+     K  + +E
Sbjct: 74  AGIYPDTITYNSLIAGATRYCMISRCFDLFEEMLEMSILPDIWSYNTLMHCFFKLRKPDE 133

Query: 386 ANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTILID 207
           A +   ++    I      +N LIN  C  G  ++A       ++ G    + T+ ILI 
Sbjct: 134 AYRVFQDILLKNISVHPATFNILINGLCMNGYTENALMLFRSIKRHGFIPQLATYNILIH 193

Query: 206 GLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAK---- 39
           GLCK+G  + AR  L  L + G   N   + + +    K  Q E  +++F  M+ K    
Sbjct: 194 GLCKSGRGKTAREFLNELVESGHIPNAITYTTVMKCCFKCEQFEEGLKIFAEMRRKGYTY 253

Query: 38  DEFTYSSIVQGL 3
           D F Y ++   L
Sbjct: 254 DAFAYCTVASML 265



 Score = 97.1 bits (240), Expect = 1e-17
 Identities = 67/289 (23%), Positives = 126/289 (43%), Gaps = 39/289 (13%)
 Frame = -3

Query: 752 TFNIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEI 573
           T+N ++T  C+    D    +L  ++  G  P+ +TYN LI G  +         L +E+
Sbjct: 47  TYNTLITAYCRFVGIDAGYSVLYRMKEAGIYPDTITYNSLIAGATRYCMISRCFDLFEEM 106

Query: 572 LDYGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRI 393
           L+   +P+  +Y T+M C FK +  +E   +F ++ LK  +     +  +   L   G  
Sbjct: 107 LEMSILPDIWSYNTLMHCFFKLRKPDEAYRVFQDILLKNISVHPATFNILINGLCMNGYT 166

Query: 392 EEANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMG----------- 246
           E A     ++ R G    +  YN LI+  CK G+ + A +FL++  + G           
Sbjct: 167 ENALMLFRSIKRHGFIPQLATYNILIHGLCKSGRGKTAREFLNELVESGHIPNAITYTTV 226

Query: 245 LEC------------------------DIYTHTILIDGLCKAGNIQGARRHLKYLNKMGF 138
           ++C                        D + +  +   L K G +  A  +L Y+   GF
Sbjct: 227 MKCCFKCEQFEEGLKIFAEMRRKGYTYDAFAYCTVASMLLKTGKMNEANEYLGYIITNGF 286

Query: 137 GTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAK----DEFTYSSIVQGL 3
             ++ +FN+ ++  CK GQ++ A ++    + K    D++T++  + GL
Sbjct: 287 DLDMVSFNTIVNLYCKEGQLDNAYKLLHEAEKKGLESDKYTHTIFIDGL 335


>ref|XP_006348886.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Solanum tuberosum]
          Length = 460

 Score =  329 bits (844), Expect = 1e-87
 Identities = 149/250 (59%), Positives = 197/250 (78%)
 Frame = -3

Query: 752 TFNIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEI 573
           TFNI++ GLC N YT+NALML R+++RHGF P+L TYNILI GLCKS + +T +  L E+
Sbjct: 152 TFNILINGLCMNGYTENALMLFRSIKRHGFIPQLATYNILIHGLCKSGRGKTAREFLNEL 211

Query: 572 LDYGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRI 393
           ++ GHIPNAITYTTVMKCCF+ +   EGL+IFSEM+ KGYT+D FAYCTVA  LLK G++
Sbjct: 212 VESGHIPNAITYTTVMKCCFRCRQFEEGLKIFSEMRRKGYTYDAFAYCTVASMLLKTGKM 271

Query: 392 EEANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTIL 213
            EAN+ +G +  +G D D+V +NT++NLYCKEG+L +A+K L +AEK GLE D YTHTI 
Sbjct: 272 NEANEYLGYIITNGFDLDIVSFNTIVNLYCKEGQLDNAYKLLHEAEKKGLESDKYTHTIF 331

Query: 212 IDGLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAKDE 33
           IDGLC+ GN + A++HL Y++ MGF +NL A NSFI+GLCK G +++A+++FESM AKD 
Sbjct: 332 IDGLCRTGNFKEAQQHLDYMSMMGFDSNLVALNSFINGLCKAGHLDHALRMFESMDAKDS 391

Query: 32  FTYSSIVQGL 3
            TYS++V  L
Sbjct: 392 ITYSTMVHSL 401



 Score = 97.4 bits (241), Expect = 9e-18
 Identities = 67/289 (23%), Positives = 126/289 (43%), Gaps = 39/289 (13%)
 Frame = -3

Query: 752 TFNIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEI 573
           T+N ++T  C+    D    +L  ++  G  P+ +TYN LI G  +         L +E+
Sbjct: 47  TYNTLITAYCRFVGIDAGYSILYRMKEAGIYPDTITYNSLIAGATRYCMISRCFNLFEEM 106

Query: 572 LDYGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRI 393
           L+   +P+  +Y T+M C FK +  +E   +F ++ LK  +     +  +   L   G  
Sbjct: 107 LEMSILPDIWSYNTLMHCFFKLRKPDEAYRVFQDILLKDISVHPATFNILINGLCMNGYT 166

Query: 392 EEANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMG----------- 246
           E A     ++ R G    +  YN LI+  CK G+ + A +FL++  + G           
Sbjct: 167 ENALMLFRSIKRHGFIPQLATYNILIHGLCKSGRGKTAREFLNELVESGHIPNAITYTTV 226

Query: 245 LEC------------------------DIYTHTILIDGLCKAGNIQGARRHLKYLNKMGF 138
           ++C                        D + +  +   L K G +  A  +L Y+   GF
Sbjct: 227 MKCCFRCRQFEEGLKIFSEMRRKGYTYDAFAYCTVASMLLKTGKMNEANEYLGYIITNGF 286

Query: 137 GTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAK----DEFTYSSIVQGL 3
             ++ +FN+ ++  CK GQ++ A ++    + K    D++T++  + GL
Sbjct: 287 DLDIVSFNTIVNLYCKEGQLDNAYKLLHEAEKKGLESDKYTHTIFIDGL 335



 Score = 96.7 bits (239), Expect = 2e-17
 Identities = 65/252 (25%), Positives = 115/252 (45%), Gaps = 4/252 (1%)
 Frame = -3

Query: 746 NIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEILD 567
           NI +  LCK +  + A +++ +  R G +P++VTYN LI   C+         +L  + +
Sbjct: 14  NICVASLCKAKQLEKAEVVIVDGIRIGVQPDVVTYNTLITAYCRFVGIDAGYSILYRMKE 73

Query: 566 YGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRIEE 387
            G  P+ ITY +++    +  M++    +F EM       D ++Y T+     K  + +E
Sbjct: 74  AGIYPDTITYNSLIAGATRYCMISRCFNLFEEMLEMSILPDIWSYNTLMHCFFKLRKPDE 133

Query: 386 ANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTILID 207
           A +   ++    I      +N LIN  C  G  ++A       ++ G    + T+ ILI 
Sbjct: 134 AYRVFQDILLKDISVHPATFNILINGLCMNGYTENALMLFRSIKRHGFIPQLATYNILIH 193

Query: 206 GLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAK---- 39
           GLCK+G  + AR  L  L + G   N   + + +    +  Q E  +++F  M+ K    
Sbjct: 194 GLCKSGRGKTAREFLNELVESGHIPNAITYTTVMKCCFRCRQFEEGLKIFSEMRRKGYTY 253

Query: 38  DEFTYSSIVQGL 3
           D F Y ++   L
Sbjct: 254 DAFAYCTVASML 265


>ref|XP_002532784.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527472|gb|EEF29603.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 487

 Score =  329 bits (843), Expect = 1e-87
 Identities = 151/250 (60%), Positives = 197/250 (78%)
 Frame = -3

Query: 752 TFNIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEI 573
           TFNIM+ GLCKN +T NALML R+L++HGF P+L+TYNILI+GLCK R+ R  + +LKE+
Sbjct: 179 TFNIMINGLCKNGFTSNALMLFRSLKQHGFVPQLITYNILINGLCKDRRLRAARSMLKEL 238

Query: 572 LDYGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRI 393
              G++PNAITYTTVMK CF+++   +GLEI  EM  KGYTFDGFAYCTV G L+K GR+
Sbjct: 239 ETSGYVPNAITYTTVMKFCFRSRRFKQGLEILQEMIDKGYTFDGFAYCTVVGVLIKTGRL 298

Query: 392 EEANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTIL 213
           EEA + M  M ++GI+ D+  YNTLINLYCK+G L+ A++ LD+ EK GL+CD YTHTIL
Sbjct: 299 EEATEYMRQMIKNGIEHDLASYNTLINLYCKQGNLEAAYQLLDEIEKEGLQCDEYTHTIL 358

Query: 212 IDGLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAKDE 33
           I+ +CKAGNI GARRH++++N MGF + L A N  + GLCK GQI++A+++FESMK +D 
Sbjct: 359 INWMCKAGNILGARRHMQHMNMMGFDSCLVALNCMVDGLCKNGQIDHAVKLFESMKMRDS 418

Query: 32  FTYSSIVQGL 3
           FTYSS+V  L
Sbjct: 419 FTYSSLVHNL 428



 Score =  113 bits (283), Expect = 1e-22
 Identities = 69/249 (27%), Positives = 120/249 (48%), Gaps = 4/249 (1%)
 Frame = -3

Query: 746 NIMLTGLCKNRYTDNALMLLRNLQRHGFRPELVTYNILIDGLCKSRKWRTVKGLLKEILD 567
           NI +  LCK +  + A  ++ +  R G  P++VTYN LID   +   +     LL  + +
Sbjct: 41  NISIASLCKAKELNKAESVIIDGIRLGVLPDVVTYNTLIDAYSRFVSFNAAYSLLNRMRE 100

Query: 566 YGHIPNAITYTTVMKCCFKNKMLNEGLEIFSEMKLKGYTFDGFAYCTVAGALLKAGRIEE 387
               P+ +TY +++    +N +L E L +F EM   G   D ++Y T+     K G+ EE
Sbjct: 101 ASISPDVVTYNSLIAGAARNCLLLESLNLFDEMLNMGIVPDVWSYNTLMHCFFKLGKAEE 160

Query: 386 ANQCMGNMFRSGIDFDMVCYNTLINLYCKEGKLQDAFKFLDDAEKMGLECDIYTHTILID 207
           AN+ +  +F  G+      +N +IN  CK G   +A       ++ G    + T+ ILI+
Sbjct: 161 ANEVLRQIFGHGLSPCPTTFNIMINGLCKNGFTSNALMLFRSLKQHGFVPQLITYNILIN 220

Query: 206 GLCKAGNIQGARRHLKYLNKMGFGTNLAAFNSFIHGLCKLGQIEYAMQVFESMKAK---- 39
           GLCK   ++ AR  LK L   G+  N   + + +    +  + +  +++ + M  K    
Sbjct: 221 GLCKDRRLRAARSMLKELETSGYVPNAITYTTVMKFCFRSRRFKQGLEILQEMIDKGYTF 280

Query: 38  DEFTYSSIV 12
           D F Y ++V
Sbjct: 281 DGFAYCTVV 289