BLASTX nr result
ID: Gardenia21_contig00015186
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Gardenia21_contig00015186
(312 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDP13864.1| unnamed protein product [Coffea canephora] 211 1e-52
ref|XP_009599439.1| PREDICTED: pentatricopeptide repeat-containi... 176 5e-42
ref|XP_009759176.1| PREDICTED: pentatricopeptide repeat-containi... 176 8e-42
ref|XP_006358175.1| PREDICTED: pentatricopeptide repeat-containi... 176 8e-42
ref|XP_004235443.1| PREDICTED: pentatricopeptide repeat-containi... 172 9e-41
emb|CBI39452.3| unnamed protein product [Vitis vinifera] 171 2e-40
ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containi... 171 2e-40
emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera] 171 2e-40
ref|XP_011042452.1| PREDICTED: pentatricopeptide repeat-containi... 169 7e-40
ref|XP_002511627.1| pentatricopeptide repeat-containing protein,... 169 7e-40
ref|XP_006375239.1| hypothetical protein POPTR_0014s05550g [Popu... 169 7e-40
ref|XP_010052040.1| PREDICTED: pentatricopeptide repeat-containi... 164 2e-38
ref|XP_010544362.1| PREDICTED: pentatricopeptide repeat-containi... 164 2e-38
ref|XP_012475332.1| PREDICTED: pentatricopeptide repeat-containi... 164 3e-38
gb|KJB24854.1| hypothetical protein B456_004G164900 [Gossypium r... 164 3e-38
ref|XP_007052225.1| Tetratricopeptide repeat (TPR)-like superfam... 164 3e-38
ref|XP_011076550.1| PREDICTED: pentatricopeptide repeat-containi... 163 5e-38
ref|XP_003622527.1| PPR containing plant-like protein [Medicago ... 162 9e-38
gb|KHF97527.1| hypothetical protein F383_12018 [Gossypium arboreum] 161 2e-37
ref|XP_012083857.1| PREDICTED: pentatricopeptide repeat-containi... 161 2e-37
>emb|CDP13864.1| unnamed protein product [Coffea canephora]
Length = 751
Score = 211 bits (538), Expect = 1e-52
Identities = 99/103 (96%), Positives = 102/103 (99%)
Frame = -3
Query: 310 GMVFELFDEMLKTYGVEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNT 131
GMVFELFDEML+TYGVEPDLYSFNILIRGFCKNSMVDEGFRFFK+MEKFNCQPDVITYNT
Sbjct: 220 GMVFELFDEMLETYGVEPDLYSFNILIRGFCKNSMVDEGFRFFKKMEKFNCQPDVITYNT 279
Query: 130 IIDGLCKDGRVNIAHNVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
IIDGLCKDGRV IAHNVMKGMLNKGPNLSP+IVTYTTLIRGYC
Sbjct: 280 IIDGLCKDGRVKIAHNVMKGMLNKGPNLSPNIVTYTTLIRGYC 322
Score = 58.9 bits (141), Expect = 1e-06
Identities = 25/88 (28%), Positives = 47/88 (53%)
Frame = -3
Query: 265 VEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTIIDGLCKDGRVNIAH 86
+ P++ ++ LIRG+C+ +DE F+E+ +P+ IT NT++ GLC+ +N
Sbjct: 307 LSPNIVTYTTLIRGYCEKLEIDEALDVFEEIACRGLKPNEITCNTLVQGLCEARMLNKVK 366
Query: 85 NVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
++ G + P T+ TL+ +C
Sbjct: 367 EILDGCGGENGGFVPDTCTFNTLMNAHC 394
>ref|XP_009599439.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Nicotiana tomentosiformis]
Length = 765
Score = 176 bits (447), Expect = 5e-42
Identities = 77/103 (74%), Positives = 93/103 (90%)
Frame = -3
Query: 310 GMVFELFDEMLKTYGVEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNT 131
GMV++LFDEMLKTYG +PDLY+FNILIRGFC NSMVD+GFRFFKEME+ C+PDVITYNT
Sbjct: 237 GMVYDLFDEMLKTYGAKPDLYTFNILIRGFCMNSMVDQGFRFFKEMERHECEPDVITYNT 296
Query: 130 IIDGLCKDGRVNIAHNVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
IIDGLC+ G+ IAHNV+KGM+ +G LSP++V+YTTL+RGYC
Sbjct: 297 IIDGLCRAGKARIAHNVLKGMVKRGHQLSPNVVSYTTLVRGYC 339
Score = 60.1 bits (144), Expect = 6e-07
Identities = 28/84 (33%), Positives = 46/84 (54%)
Frame = -3
Query: 265 VEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTIIDGLCKDGRVNIAH 86
+ P++ S+ L+RG+C+ V+ FKEM +P ITYNT++ GLC+ + +
Sbjct: 324 LSPNVVSYTTLVRGYCEKQEVEHALDVFKEMIDLGLKPTSITYNTLVQGLCEAQKFDRIK 383
Query: 85 NVMKGMLNKGPNLSPSIVTYTTLI 14
+++G L G P T+ TLI
Sbjct: 384 EILEGTLG-GGGFIPDTCTFNTLI 406
Score = 59.3 bits (142), Expect = 1e-06
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Frame = -3
Query: 286 EMLKTYGVEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFN-------CQPDVITYNTI 128
E + V+PD +++ILIR FC+ D + F E++K + C+P V YN +
Sbjct: 423 ESMSDLKVKPDSATYSILIRSFCQKGYFDRALKLFDELKKTDVLLCDDGCKPVVAAYNLM 482
Query: 127 IDGLCKDGRVNIAHNVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
+ LCK G+ A V + ++ +G + + Y LI G+C
Sbjct: 483 FEHLCKIGKTKKAEKVFRQLMRRG---TQDPLAYRILIMGHC 521
Score = 57.4 bits (137), Expect = 4e-06
Identities = 28/81 (34%), Positives = 43/81 (53%)
Frame = -3
Query: 244 FNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTIIDGLCKDGRVNIAHNVMKGML 65
FN LIR + K + E + FK M+ P V+T+N++ L K GR + +++ ML
Sbjct: 188 FNTLIRSYGKAGLFQESLKVFKTMKSLGISPSVVTFNSLFSILLKRGRTGMVYDLFDEML 247
Query: 64 NKGPNLSPSIVTYTTLIRGYC 2
K P + T+ LIRG+C
Sbjct: 248 -KTYGAKPDLYTFNILIRGFC 267
>ref|XP_009759176.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Nicotiana sylvestris]
Length = 764
Score = 176 bits (445), Expect = 8e-42
Identities = 77/103 (74%), Positives = 93/103 (90%)
Frame = -3
Query: 310 GMVFELFDEMLKTYGVEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNT 131
GMV++LFDEMLKTYG +PD Y+FNILIRGFC NSMVD+GFRFFKEME+ C+PDVITYNT
Sbjct: 236 GMVYDLFDEMLKTYGAKPDSYTFNILIRGFCMNSMVDQGFRFFKEMERHECEPDVITYNT 295
Query: 130 IIDGLCKDGRVNIAHNVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
IIDGLC+ G+V IAHNV+KGM+ +G LSP++V+YTTL+RGYC
Sbjct: 296 IIDGLCRAGKVKIAHNVLKGMVKRGHQLSPNVVSYTTLVRGYC 338
Score = 59.7 bits (143), Expect = 8e-07
Identities = 28/88 (31%), Positives = 47/88 (53%)
Frame = -3
Query: 265 VEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTIIDGLCKDGRVNIAH 86
+ P++ S+ L+RG+C+ V+ FKEM +P ITYNT++ GLC+ + +
Sbjct: 323 LSPNVVSYTTLVRGYCEKQEVEHALDVFKEMIDLGLKPTSITYNTLVQGLCEAQKFDRIK 382
Query: 85 NVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
+++ L G P T+ TLI +C
Sbjct: 383 EILERTLG-GGRFIPDTCTFNTLITYHC 409
Score = 56.2 bits (134), Expect = 9e-06
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Frame = -3
Query: 295 LFDEMLKTYGVEP--DLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTIID 122
LF ++ G P D Y FN LIR + K + E + FK M+ P V+T+N++
Sbjct: 169 LFSIPTRSNGTVPLQDKY-FNTLIRSYGKAGLFQESLKVFKTMKSLGISPSVVTFNSLFT 227
Query: 121 GLCKDGRVNIAHNVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
L K GR + +++ ML K P T+ LIRG+C
Sbjct: 228 ILLKRGRTGMVYDLFDEML-KTYGAKPDSYTFNILIRGFC 266
>ref|XP_006358175.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like isoform X1 [Solanum tuberosum]
Length = 718
Score = 176 bits (445), Expect = 8e-42
Identities = 76/103 (73%), Positives = 94/103 (91%)
Frame = -3
Query: 310 GMVFELFDEMLKTYGVEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNT 131
GMV+ELFDEMLKT+G +PD+Y+FNILIRGFC NSMVD+GFRFFKEME+ C+PDVITYNT
Sbjct: 208 GMVYELFDEMLKTFGAKPDVYTFNILIRGFCMNSMVDKGFRFFKEMERHECEPDVITYNT 267
Query: 130 IIDGLCKDGRVNIAHNVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
I+DGLC+ G+V IAHNV+KGM+ +G LSP++V+YTTL+RGYC
Sbjct: 268 IVDGLCRAGKVEIAHNVLKGMVKRGHQLSPNVVSYTTLVRGYC 310
Score = 63.9 bits (154), Expect = 4e-08
Identities = 30/88 (34%), Positives = 49/88 (55%)
Frame = -3
Query: 265 VEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTIIDGLCKDGRVNIAH 86
+ P++ S+ L+RG+C+ V+ F+EM +P ITYNT++ GLC+ R +
Sbjct: 295 LSPNVVSYTTLVRGYCEKQEVERALDVFEEMIDCGLKPTSITYNTLVQGLCEAKRFDRIK 354
Query: 85 NVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
+++G L G L P T+ TLI +C
Sbjct: 355 EILEGTLGSG-GLIPDTCTFNTLITFHC 381
>ref|XP_004235443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Solanum lycopersicum]
Length = 710
Score = 172 bits (436), Expect = 9e-41
Identities = 75/103 (72%), Positives = 93/103 (90%)
Frame = -3
Query: 310 GMVFELFDEMLKTYGVEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNT 131
GMV+ELFDEMLKT+G +PD+Y+FNILIRGFC NSMVD+GFRFFKEME+ C+P+VITYNT
Sbjct: 202 GMVYELFDEMLKTFGAKPDVYTFNILIRGFCINSMVDKGFRFFKEMERHECEPNVITYNT 261
Query: 130 IIDGLCKDGRVNIAHNVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
I+DGLC+ G+V IAHNV+KGM +G LSP++V+YTTL+RGYC
Sbjct: 262 IVDGLCRAGKVEIAHNVLKGMAKRGHQLSPNVVSYTTLVRGYC 304
Score = 63.5 bits (153), Expect = 6e-08
Identities = 30/88 (34%), Positives = 49/88 (55%)
Frame = -3
Query: 265 VEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTIIDGLCKDGRVNIAH 86
+ P++ S+ L+RG+C+ V+ F+EM +P ITYNT++ GLC+ R +
Sbjct: 289 LSPNVVSYTTLVRGYCEKQEVERALDVFEEMIDRGLKPTSITYNTLVQGLCEAKRFDRIK 348
Query: 85 NVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
+++G L G L P T+ TLI +C
Sbjct: 349 EILEGTLGSG-GLIPDTCTFNTLITYHC 375
>emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 171 bits (433), Expect = 2e-40
Identities = 76/102 (74%), Positives = 88/102 (86%)
Frame = -3
Query: 307 MVFELFDEMLKTYGVEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTI 128
M +LFDEML TYGV PD Y+FNILIRGFC NSMVDEGF FFKEM +F C PDV+TYNT+
Sbjct: 218 MAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTL 277
Query: 127 IDGLCKDGRVNIAHNVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
+DGLC+ G+V IAHNV+KGM+ K PNLSP++VTYTTLIRGYC
Sbjct: 278 VDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYC 319
Score = 61.2 bits (147), Expect = 3e-07
Identities = 29/92 (31%), Positives = 50/92 (54%)
Frame = -3
Query: 277 KTYGVEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTIIDGLCKDGRV 98
K+ + P++ ++ LIRG+C + E EM +P+ ITYNT+I GLC+ ++
Sbjct: 300 KSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKL 359
Query: 97 NIAHNVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
+ +++GM+ G P T TLI+ +C
Sbjct: 360 DKIKEILEGMVGDG-GFIPDTCTLNTLIKAHC 390
>ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Vitis vinifera]
gi|731390607|ref|XP_010650422.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Vitis vinifera]
Length = 746
Score = 171 bits (433), Expect = 2e-40
Identities = 76/102 (74%), Positives = 88/102 (86%)
Frame = -3
Query: 307 MVFELFDEMLKTYGVEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTI 128
M +LFDEML TYGV PD Y+FNILIRGFC NSMVDEGF FFKEM +F C PDV+TYNT+
Sbjct: 218 MAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTL 277
Query: 127 IDGLCKDGRVNIAHNVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
+DGLC+ G+V IAHNV+KGM+ K PNLSP++VTYTTLIRGYC
Sbjct: 278 VDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYC 319
Score = 61.2 bits (147), Expect = 3e-07
Identities = 29/92 (31%), Positives = 50/92 (54%)
Frame = -3
Query: 277 KTYGVEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTIIDGLCKDGRV 98
K+ + P++ ++ LIRG+C + E EM +P+ ITYNT+I GLC+ ++
Sbjct: 300 KSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKL 359
Query: 97 NIAHNVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
+ +++GM+ G P T TLI+ +C
Sbjct: 360 DKIKEILEGMVGDG-GFIPDTCTLNTLIKAHC 390
>emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]
Length = 1024
Score = 171 bits (433), Expect = 2e-40
Identities = 76/102 (74%), Positives = 88/102 (86%)
Frame = -3
Query: 307 MVFELFDEMLKTYGVEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTI 128
M +LFDEML TYGV PD Y+FNILIRGFC NSMVDEGF FFKEM +F C PDV+TYNT+
Sbjct: 289 MAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTL 348
Query: 127 IDGLCKDGRVNIAHNVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
+DGLC+ G+V IAHNV+KGM+ K PNLSP++VTYTTLIRGYC
Sbjct: 349 VDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYC 390
Score = 61.2 bits (147), Expect = 3e-07
Identities = 29/92 (31%), Positives = 50/92 (54%)
Frame = -3
Query: 277 KTYGVEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTIIDGLCKDGRV 98
K+ + P++ ++ LIRG+C + E EM +P+ ITYNT+I GLC+ ++
Sbjct: 371 KSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKL 430
Query: 97 NIAHNVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
+ +++GM+ G P T TLI+ +C
Sbjct: 431 DKIKEILEGMVGDG-GFIPDTCTLNTLIKAHC 461
>ref|XP_011042452.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Populus euphratica]
Length = 1216
Score = 169 bits (428), Expect = 7e-40
Identities = 74/102 (72%), Positives = 88/102 (86%)
Frame = -3
Query: 307 MVFELFDEMLKTYGVEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTI 128
M +FDEM TYGV PD Y+FNILIRGFCKNSMVDEGFRFFKEM +FNC+PDV+TYNT+
Sbjct: 214 MAHSVFDEMCGTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTL 273
Query: 127 IDGLCKDGRVNIAHNVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
+DGLC+ G+V IAHNV+KGM+ K +LSP +VTYTTL+RGYC
Sbjct: 274 VDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYC 315
Score = 62.4 bits (150), Expect = 1e-07
Identities = 30/92 (32%), Positives = 48/92 (52%)
Frame = -3
Query: 277 KTYGVEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTIIDGLCKDGRV 98
K + PD+ ++ L+RG+C +DE F+EM +P+ ITYNT+I GLC+ +
Sbjct: 296 KMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKF 355
Query: 97 NIAHNVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
+ ++ G + G P TY TL+ C
Sbjct: 356 DKIKEILGGAVG-GRGFVPDTCTYNTLMNSQC 386
Score = 61.2 bits (147), Expect = 3e-07
Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 13/110 (11%)
Frame = -3
Query: 292 FDEMLKTYG------VEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFN-------CQP 152
FDE LK + V+PD ++++LIR C+ + + F E+ + C P
Sbjct: 391 FDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDELSDDDILLRDDGCTP 450
Query: 151 DVITYNTIIDGLCKDGRVNIAHNVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
V YN I D LCK+G+ + A V + ++ KG PS Y TLI G+C
Sbjct: 451 LVAAYNPIFDFLCKNGKTSKAERVFRQLMKKGTQDPPS---YKTLILGHC 497
>ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548807|gb|EEF50296.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1163
Score = 169 bits (428), Expect = 7e-40
Identities = 73/102 (71%), Positives = 87/102 (85%)
Frame = -3
Query: 307 MVFELFDEMLKTYGVEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTI 128
M +FDEML TYGV PD Y+FNILIRGFCKNSMVDEGFRFFKEM +F C PD++TYNT+
Sbjct: 209 MAQSVFDEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTL 268
Query: 127 IDGLCKDGRVNIAHNVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
+DGLC+ G+VNIAHNV+ GM+ K NL+P +VTYTTL+RGYC
Sbjct: 269 VDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYC 310
Score = 64.7 bits (156), Expect = 3e-08
Identities = 30/92 (32%), Positives = 50/92 (54%)
Frame = -3
Query: 277 KTYGVEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTIIDGLCKDGRV 98
K+ + PD+ ++ L+RG+C +DE F+EM +P+ ITYNT+I GLC+ ++
Sbjct: 291 KSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKI 350
Query: 97 NIAHNVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
+ + +G L G P T TL+ +C
Sbjct: 351 DKIKQIFEGALG-GGGFIPDTCTLNTLMNAHC 381
Score = 56.6 bits (135), Expect = 7e-06
Identities = 29/81 (35%), Positives = 45/81 (55%)
Frame = -3
Query: 244 FNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTIIDGLCKDGRVNIAHNVMKGML 65
FN LIR + K + E + F M+ P V+T+N+++ L K GR N+A +V ML
Sbjct: 159 FNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEML 218
Query: 64 NKGPNLSPSIVTYTTLIRGYC 2
+ ++P T+ LIRG+C
Sbjct: 219 ST-YGVTPDTYTFNILIRGFC 238
>ref|XP_006375239.1| hypothetical protein POPTR_0014s05550g [Populus trichocarpa]
gi|550323558|gb|ERP53036.1| hypothetical protein
POPTR_0014s05550g [Populus trichocarpa]
Length = 728
Score = 169 bits (428), Expect = 7e-40
Identities = 74/102 (72%), Positives = 88/102 (86%)
Frame = -3
Query: 307 MVFELFDEMLKTYGVEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTI 128
M +FDEM TYGV PD Y+FNILIRGFCKNSMVDEGFRFFKEM +FNC+PDV+TYNT+
Sbjct: 214 MAHSVFDEMCGTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTL 273
Query: 127 IDGLCKDGRVNIAHNVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
+DGLC+ G+V IAHNV+KGM+ K +LSP +VTYTTL+RGYC
Sbjct: 274 VDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYC 315
Score = 62.4 bits (150), Expect = 1e-07
Identities = 30/92 (32%), Positives = 48/92 (52%)
Frame = -3
Query: 277 KTYGVEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTIIDGLCKDGRV 98
K + PD+ ++ L+RG+C +DE F+EM +P+ ITYNT+I GLC+ +
Sbjct: 296 KMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKF 355
Query: 97 NIAHNVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
+ ++ G + G P TY TL+ C
Sbjct: 356 DKIKEILGGAVG-GRGFVPDTCTYNTLMNAQC 386
Score = 59.3 bits (142), Expect = 1e-06
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 13/110 (11%)
Frame = -3
Query: 292 FDEMLKTYG------VEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFN-------CQP 152
FDE LK + V+PD ++++LIR C+ + + F ++ + C P
Sbjct: 391 FDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTP 450
Query: 151 DVITYNTIIDGLCKDGRVNIAHNVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
V YN I D LCK+G+ + A V + ++ KG PS Y TLI G+C
Sbjct: 451 LVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQDPPS---YKTLIIGHC 497
>ref|XP_010052040.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Eucalyptus grandis]
gi|629110935|gb|KCW75895.1| hypothetical protein
EUGRSUZ_D00277 [Eucalyptus grandis]
Length = 761
Score = 164 bits (416), Expect = 2e-38
Identities = 72/102 (70%), Positives = 88/102 (86%)
Frame = -3
Query: 307 MVFELFDEMLKTYGVEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTI 128
MV ++DEML TYGV PD Y++NILIRGFC NSMVDEGF FFKEM +FNC+PDVITYNT+
Sbjct: 213 MVKHVYDEMLNTYGVTPDTYTYNILIRGFCMNSMVDEGFHFFKEMSQFNCEPDVITYNTL 272
Query: 127 IDGLCKDGRVNIAHNVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
+DGLC+ G+VNIA+NV+KGM K +L P+++TYTTLIRGYC
Sbjct: 273 VDGLCRAGKVNIANNVVKGMRTKSADLKPNVITYTTLIRGYC 314
Score = 62.8 bits (151), Expect = 1e-07
Identities = 28/93 (30%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Frame = -3
Query: 277 KTYGVEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTIIDGLCKDGRV 98
K+ ++P++ ++ LIRG+C +D+ +EM +P+ ITYNT+I GLC+ ++
Sbjct: 295 KSADLKPNVITYTTLIRGYCMKGEIDDALAIIEEMVNGGLKPNKITYNTLIKGLCEARKL 354
Query: 97 NIAHNVMKGMLNKGPNL-SPSIVTYTTLIRGYC 2
+ +++G + KG + P T TL+ +C
Sbjct: 355 DKIKEILEGTVGKGDRVFIPDSCTLNTLMHSHC 387
Score = 61.2 bits (147), Expect = 3e-07
Identities = 31/81 (38%), Positives = 45/81 (55%)
Frame = -3
Query: 244 FNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTIIDGLCKDGRVNIAHNVMKGML 65
FN LIR + K + E + F++M++ P VIT+N + L K GR N+ +V ML
Sbjct: 163 FNSLIRSYGKAGLFQESLKLFEKMKEIGISPSVITFNNLFSLLLKRGRTNMVKHVYDEML 222
Query: 64 NKGPNLSPSIVTYTTLIRGYC 2
N ++P TY LIRG+C
Sbjct: 223 NT-YGVTPDTYTYNILIRGFC 242
>ref|XP_010544362.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Tarenaya hassleriana]
Length = 676
Score = 164 bits (415), Expect = 2e-38
Identities = 73/103 (70%), Positives = 88/103 (85%)
Frame = -3
Query: 310 GMVFELFDEMLKTYGVEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNT 131
GMV +FDEML TYGV PD Y++NILIRGFCK+SMV EGFR FKEME+ C P+V+TYNT
Sbjct: 167 GMVHNMFDEMLHTYGVTPDSYTYNILIRGFCKDSMVHEGFRLFKEMEQSKCHPNVVTYNT 226
Query: 130 IIDGLCKDGRVNIAHNVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
I+DGLC+ G+V IAHNV+KGM+ KG +L P+IVTYTTL+RGYC
Sbjct: 227 IVDGLCRAGKVKIAHNVVKGMMKKGTDLRPNIVTYTTLVRGYC 269
Score = 60.5 bits (145), Expect = 5e-07
Identities = 30/94 (31%), Positives = 48/94 (51%)
Frame = -3
Query: 283 MLKTYGVEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTIIDGLCKDG 104
M K + P++ ++ L+RG+C +DE F+EM +P+ ITYNT+I GLC+
Sbjct: 248 MKKGTDLRPNIVTYTTLVRGYCMKHEIDEALAVFREMLTRGLKPNDITYNTLIKGLCEAQ 307
Query: 103 RVNIAHNVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
R ++ + K +P TY LI +C
Sbjct: 308 RYEEIKEIL-DVGGKSSGFAPDACTYNILIAAHC 340
Score = 57.0 bits (136), Expect = 5e-06
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 7/106 (6%)
Frame = -3
Query: 298 ELFDEMLKTYGVEPDLYSFNILIRGFCKNSMVDEGFRFFKEM-------EKFNCQPDVIT 140
++F EM+ V+PD S++ILIR FC+ + E+ K C+P
Sbjct: 350 KVFGEMVNL-NVQPDSASYSILIRNFCQRKDFERAEALLNELLEKEILLGKDGCKPLFAA 408
Query: 139 YNTIIDGLCKDGRVNIAHNVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
YN + LC +G+ A V + ++ +G SPS Y TLI G+C
Sbjct: 409 YNPVFTYLCANGKTEKAEKVFRQLMKRGTQDSPS---YKTLIMGFC 451
>ref|XP_012475332.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Gossypium raimondii]
Length = 678
Score = 164 bits (414), Expect = 3e-38
Identities = 72/102 (70%), Positives = 88/102 (86%)
Frame = -3
Query: 307 MVFELFDEMLKTYGVEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTI 128
M +F+EML TYGV PD+Y+FNILI+GFC NSMVDEGFRFFKEME+F C PDV+TYNTI
Sbjct: 150 MAKSVFNEMLSTYGVTPDVYTFNILIKGFCMNSMVDEGFRFFKEMERFKCDPDVVTYNTI 209
Query: 127 IDGLCKDGRVNIAHNVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
+DGLC+ G+V IAHNV+KGM K +L+P++VTYTTL+RGYC
Sbjct: 210 VDGLCRVGKVGIAHNVVKGMSKKSLDLNPNVVTYTTLLRGYC 251
>gb|KJB24854.1| hypothetical protein B456_004G164900 [Gossypium raimondii]
Length = 1615
Score = 164 bits (414), Expect = 3e-38
Identities = 72/102 (70%), Positives = 88/102 (86%)
Frame = -3
Query: 307 MVFELFDEMLKTYGVEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTI 128
M +F+EML TYGV PD+Y+FNILI+GFC NSMVDEGFRFFKEME+F C PDV+TYNTI
Sbjct: 1087 MAKSVFNEMLSTYGVTPDVYTFNILIKGFCMNSMVDEGFRFFKEMERFKCDPDVVTYNTI 1146
Query: 127 IDGLCKDGRVNIAHNVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
+DGLC+ G+V IAHNV+KGM K +L+P++VTYTTL+RGYC
Sbjct: 1147 VDGLCRVGKVGIAHNVVKGMSKKSLDLNPNVVTYTTLLRGYC 1188
>ref|XP_007052225.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao] gi|508704486|gb|EOX96382.1|
Tetratricopeptide repeat (TPR)-like superfamily protein,
putative [Theobroma cacao]
Length = 724
Score = 164 bits (414), Expect = 3e-38
Identities = 72/102 (70%), Positives = 87/102 (85%)
Frame = -3
Query: 307 MVFELFDEMLKTYGVEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTI 128
M +FDEML TYGV PD+Y+FNILIRGFC NSMVDEGFRFFKEME+F C PDV+TYNTI
Sbjct: 213 MAKSVFDEMLSTYGVSPDVYTFNILIRGFCMNSMVDEGFRFFKEMERFKCDPDVVTYNTI 272
Query: 127 IDGLCKDGRVNIAHNVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
+DGLC+ G+V IA NV++GM K +L+P++VTYTTL+RGYC
Sbjct: 273 VDGLCRAGKVGIARNVVRGMSKKSLDLNPNVVTYTTLVRGYC 314
Score = 58.9 bits (141), Expect = 1e-06
Identities = 30/92 (32%), Positives = 47/92 (51%)
Frame = -3
Query: 277 KTYGVEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTIIDGLCKDGRV 98
K+ + P++ ++ L+RG+C +DE FKEM +P+ ITYNT+I GL +
Sbjct: 295 KSLDLNPNVVTYTTLVRGYCMKQEIDEALVVFKEMISRRLRPNRITYNTLIKGLSEVHEY 354
Query: 97 NIAHNVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
+++GM G P T TLI +C
Sbjct: 355 EKIKEILEGMGEDG-RFVPDTCTLNTLINAHC 385
>ref|XP_011076550.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Sesamum indicum]
Length = 790
Score = 163 bits (412), Expect = 5e-38
Identities = 72/102 (70%), Positives = 88/102 (86%)
Frame = -3
Query: 307 MVFELFDEMLKTYGVEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTI 128
MVFEL+DEML+TYGV+PDLY+FNILIRGFC NS VDE FR FKEME+F C+PD+ITYNTI
Sbjct: 281 MVFELYDEMLRTYGVKPDLYTFNILIRGFCMNSKVDEAFRMFKEMERFECEPDLITYNTI 340
Query: 127 IDGLCKDGRVNIAHNVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
+DGLC+ G+VN+A NV+ GM K L P++V+YTTLIRG+C
Sbjct: 341 VDGLCRAGKVNVARNVVNGMSKKCEKLRPNVVSYTTLIRGFC 382
Score = 60.8 bits (146), Expect = 4e-07
Identities = 27/88 (30%), Positives = 46/88 (52%)
Frame = -3
Query: 265 VEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTIIDGLCKDGRVNIAH 86
+ P++ S+ LIRGFC +DE F++M +P+ IT NTII GLC + ++
Sbjct: 367 LRPNVVSYTTLIRGFCGRQEIDEAMDVFRQMVSSGIKPNEITCNTIIQGLCASQKFDMIK 426
Query: 85 NVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
+++ G P T+ T++ +C
Sbjct: 427 EILEECQVDGRGFVPDTCTFNTVMNAHC 454
>ref|XP_003622527.1| PPR containing plant-like protein [Medicago truncatula]
gi|355497542|gb|AES78745.1| PPR containing plant-like
protein [Medicago truncatula]
Length = 721
Score = 162 bits (410), Expect = 9e-38
Identities = 70/102 (68%), Positives = 87/102 (85%)
Frame = -3
Query: 307 MVFELFDEMLKTYGVEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTI 128
M E++DEMLKTYGV+PD Y++NILIRGFCKNSMVDEGF FFKEM F+C PDV+TYNT+
Sbjct: 208 MAKEVYDEMLKTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTL 267
Query: 127 IDGLCKDGRVNIAHNVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
+DGLC+ G++ +AHN++ GM K +LSP +VTYTTLIRGYC
Sbjct: 268 VDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYC 309
Score = 65.9 bits (159), Expect = 1e-08
Identities = 30/92 (32%), Positives = 52/92 (56%)
Frame = -3
Query: 277 KTYGVEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTIIDGLCKDGRV 98
K + PD+ ++ LIRG+C+ VDE +EM +P+++TYNT+I GLC+ +
Sbjct: 290 KCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKW 349
Query: 97 NIAHNVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
+ +++ M G ++ P T+ TLI +C
Sbjct: 350 DKMKEILEQMKGDGGSI-PDACTFNTLINSHC 380
Score = 57.0 bits (136), Expect = 5e-06
Identities = 30/81 (37%), Positives = 44/81 (54%)
Frame = -3
Query: 244 FNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTIIDGLCKDGRVNIAHNVMKGML 65
FN LIR + + + E + F+ M+ P V+T+N+++ L K GR N+A V ML
Sbjct: 158 FNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEML 217
Query: 64 NKGPNLSPSIVTYTTLIRGYC 2
K + P TY LIRG+C
Sbjct: 218 -KTYGVKPDTYTYNILIRGFC 237
>gb|KHF97527.1| hypothetical protein F383_12018 [Gossypium arboreum]
Length = 741
Score = 161 bits (408), Expect = 2e-37
Identities = 72/102 (70%), Positives = 87/102 (85%)
Frame = -3
Query: 307 MVFELFDEMLKTYGVEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTI 128
M +FDEML TYGV PD+Y+FNILI+GF NSMVDEGFRFFKEME+F C PDV+TYNTI
Sbjct: 213 MAKSVFDEMLSTYGVTPDVYTFNILIKGFGMNSMVDEGFRFFKEMERFKCDPDVVTYNTI 272
Query: 127 IDGLCKDGRVNIAHNVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
+DGLC+ G+V IAHNV+KGM K +L+P++VTYTTL+RGYC
Sbjct: 273 VDGLCRVGKVRIAHNVVKGMSKKSLDLNPNVVTYTTLVRGYC 314
Score = 61.6 bits (148), Expect = 2e-07
Identities = 29/92 (31%), Positives = 51/92 (55%)
Frame = -3
Query: 277 KTYGVEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTIIDGLCKDGRV 98
K+ + P++ ++ L+RG+C +DE F+EM +P+ ITYNT+I GL + +
Sbjct: 295 KSLDLNPNVVTYTTLVRGYCMKQDIDEALAVFQEMICRGLKPNKITYNTLIKGLSEVHKY 354
Query: 97 NIAHNVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
+ +++GM G +P T+ TLI +C
Sbjct: 355 DKIKEILEGMRKDG-RFTPDTCTFNTLINAHC 385
>ref|XP_012083857.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Jatropha curcas]
Length = 1162
Score = 161 bits (407), Expect = 2e-37
Identities = 68/102 (66%), Positives = 86/102 (84%)
Frame = -3
Query: 307 MVFELFDEMLKTYGVEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTI 128
M +FDEML TYGV PD Y+FNILIRGFCKNSMVD+GFRFF++M FNC PD++TYNT+
Sbjct: 213 MAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTL 272
Query: 127 IDGLCKDGRVNIAHNVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
+DGLC+ G+V AHNV+KGM+ K +L+P +V+YTTL+RGYC
Sbjct: 273 VDGLCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYC 314
Score = 71.2 bits (173), Expect = 3e-10
Identities = 33/92 (35%), Positives = 53/92 (57%)
Frame = -3
Query: 277 KTYGVEPDLYSFNILIRGFCKNSMVDEGFRFFKEMEKFNCQPDVITYNTIIDGLCKDGRV 98
K+ + PD+ S+ L+RG+C +DE F+EM +P+ +TYNT+I GLC+ ++
Sbjct: 295 KSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKI 354
Query: 97 NIAHNVMKGMLNKGPNLSPSIVTYTTLIRGYC 2
+ V++G L G SP T TL+ G+C
Sbjct: 355 DKIKEVLEGALEVG-GFSPDTCTLNTLMNGHC 385