BLASTX nr result

ID: Gardenia21_contig00013081 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00013081
         (210 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P82411.1|PSRP6_SPIOL RecName: Full=50S ribosomal protein 6, c...    62   2e-07
ref|XP_006356805.1| PREDICTED: 50S ribosomal protein 6, chloropl...    61   4e-07
ref|XP_011074311.1| PREDICTED: 50S ribosomal protein 6, chloropl...    60   6e-07
ref|XP_009762288.1| PREDICTED: 50S ribosomal protein 6, chloropl...    59   1e-06
ref|XP_012838813.1| PREDICTED: 50S ribosomal protein 6, chloropl...    58   2e-06
ref|XP_009595726.1| PREDICTED: 50S ribosomal protein 6, chloropl...    58   2e-06
gb|EYU36414.1| hypothetical protein MIMGU_mgv1a017064mg [Erythra...    58   2e-06
ref|XP_004238050.1| PREDICTED: 50S ribosomal protein 6, chloropl...    58   3e-06
gb|KCW66283.1| hypothetical protein EUGRSUZ_F00111 [Eucalyptus g...    57   5e-06

>sp|P82411.1|PSRP6_SPIOL RecName: Full=50S ribosomal protein 6, chloroplastic; AltName:
           Full=CL25; AltName: Full=Plastid-specific 50S ribosomal
           protein 6; Short=PSRP-6; Flags: Precursor [Spinacia
           oleracea] gi|7578927|gb|AAF64189.1|AF245292_1
           plastid-specific ribosomal protein 6 precursor [Spinacia
           oleracea] gi|902213141|gb|KNA17188.1| hypothetical
           protein SOVF_082300 [Spinacia oleracea]
          Length = 116

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 34/63 (53%), Positives = 45/63 (71%)
 Frame = -3

Query: 193 MSVSAIFGARMVTMPNPVGISGGATKNTAALRIVPAGDFSCRGGVGLVIECSSRPQKKAT 14
           MSVSAIFGAR+VT+P+ +  S   + +   +++ P+   SC GGV + IECSSRPQKK T
Sbjct: 1   MSVSAIFGARVVTIPSVLRTS---SVDGRTVKLQPSTGGSCGGGV-ITIECSSRPQKKGT 56

Query: 13  AHH 5
           AHH
Sbjct: 57  AHH 59


>ref|XP_006356805.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Solanum
           tuberosum]
          Length = 111

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 37/69 (53%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
 Frame = -3

Query: 193 MSVSAIFGARMVTMP-----NPVGISGGATKNTAALRIVPAGDFSCRGGVGLVIECSSRP 29
           MS SAIFG +MV +P     +  G +GGAT+  AA   V           GLVIECSSRP
Sbjct: 1   MSASAIFGLQMVVLPRSSTVSTTGFTGGATRLAAAPTSVG----------GLVIECSSRP 50

Query: 28  QKKATAHHK 2
           QKKATAHHK
Sbjct: 51  QKKATAHHK 59


>ref|XP_011074311.1| PREDICTED: 50S ribosomal protein 6, chloroplastic [Sesamum indicum]
          Length = 110

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 35/63 (55%), Positives = 39/63 (61%)
 Frame = -3

Query: 193 MSVSAIFGARMVTMPNPVGISGGATKNTAALRIVPAGDFSCRGGVGLVIECSSRPQKKAT 14
           MSVSAIFGAR+V  P           ++AA + VP       GG GLVIECSSRPQKKAT
Sbjct: 1   MSVSAIFGARLVLPP----------PSSAATKAVPLTLGGGHGGCGLVIECSSRPQKKAT 50

Query: 13  AHH 5
            HH
Sbjct: 51  KHH 53


>ref|XP_009762288.1| PREDICTED: 50S ribosomal protein 6, chloroplastic [Nicotiana
           sylvestris]
          Length = 105

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 36/69 (52%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
 Frame = -3

Query: 193 MSVSAIFGARMVTMP-----NPVGISGGATKNTAALRIVPAGDFSCRGGVGLVIECSSRP 29
           MS SAIFG +M  +P     +  G  GGATK  AA + V           GL IECSSRP
Sbjct: 1   MSASAIFGLKMAVLPRSSTVSTTGFYGGATKLAAAPKSVG----------GLAIECSSRP 50

Query: 28  QKKATAHHK 2
           QKKATAHHK
Sbjct: 51  QKKATAHHK 59


>ref|XP_012838813.1| PREDICTED: 50S ribosomal protein 6, chloroplastic [Erythranthe
           guttatus]
          Length = 111

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 34/63 (53%), Positives = 40/63 (63%)
 Frame = -3

Query: 193 MSVSAIFGARMVTMPNPVGISGGATKNTAALRIVPAGDFSCRGGVGLVIECSSRPQKKAT 14
           MSVSAIFG+R+V  P+   +   ATK  A  + +  G     GG GLVIECSSRPQKK T
Sbjct: 1   MSVSAIFGSRVVLPPSSAAV---ATKAIAPPQRLAVG--GGHGGTGLVIECSSRPQKKGT 55

Query: 13  AHH 5
            HH
Sbjct: 56  KHH 58


>ref|XP_009595726.1| PREDICTED: 50S ribosomal protein 6, chloroplastic [Nicotiana
           tomentosiformis]
          Length = 109

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 35/69 (50%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
 Frame = -3

Query: 193 MSVSAIFGARMVTMP-----NPVGISGGATKNTAALRIVPAGDFSCRGGVGLVIECSSRP 29
           MS SAIFG +M  +P     +  G+ GGATK  AA +             GL IECSSRP
Sbjct: 1   MSASAIFGLKMAVLPRSSTASTTGLYGGATKLAAAPKSFG----------GLAIECSSRP 50

Query: 28  QKKATAHHK 2
           QKKATAHHK
Sbjct: 51  QKKATAHHK 59


>gb|EYU36414.1| hypothetical protein MIMGU_mgv1a017064mg [Erythranthe guttata]
          Length = 95

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 34/63 (53%), Positives = 40/63 (63%)
 Frame = -3

Query: 193 MSVSAIFGARMVTMPNPVGISGGATKNTAALRIVPAGDFSCRGGVGLVIECSSRPQKKAT 14
           MSVSAIFG+R+V  P+   +   ATK  A  + +  G     GG GLVIECSSRPQKK T
Sbjct: 1   MSVSAIFGSRVVLPPSSAAV---ATKAIAPPQRLAVG--GGHGGTGLVIECSSRPQKKGT 55

Query: 13  AHH 5
            HH
Sbjct: 56  KHH 58


>ref|XP_004238050.1| PREDICTED: 50S ribosomal protein 6, chloroplastic [Solanum
           lycopersicum]
          Length = 111

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 34/69 (49%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
 Frame = -3

Query: 193 MSVSAIFGARMVTMP-----NPVGISGGATKNTAALRIVPAGDFSCRGGVGLVIECSSRP 29
           MS SAIFG +M  +P     +  G +GGAT+  +A   +           GLVIECSSRP
Sbjct: 1   MSASAIFGLQMAVLPRSSTVSATGFTGGATRLASAPTSIG----------GLVIECSSRP 50

Query: 28  QKKATAHHK 2
           QKKATAHHK
Sbjct: 51  QKKATAHHK 59


>gb|KCW66283.1| hypothetical protein EUGRSUZ_F00111 [Eucalyptus grandis]
          Length = 176

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 34/69 (49%), Positives = 43/69 (62%)
 Frame = -3

Query: 208 QTQAKMSVSAIFGARMVTMPNPVGISGGATKNTAALRIVPAGDFSCRGGVGLVIECSSRP 29
           Q ++ MS+SAIFG R+   P P     G+    AA R+  AG +   GG   ++ECSSRP
Sbjct: 42  QRKSAMSISAIFGTRIPVAPPP---PAGSAPPKAAQRL--AGGW---GGTVSIVECSSRP 93

Query: 28  QKKATAHHK 2
           QKKATAHHK
Sbjct: 94  QKKATAHHK 102


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