BLASTX nr result
ID: Gardenia21_contig00012847
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Gardenia21_contig00012847
(1711 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDO96840.1| unnamed protein product [Coffea canephora] 810 0.0
ref|XP_010655542.1| PREDICTED: pentatricopeptide repeat-containi... 676 0.0
ref|XP_011657608.1| PREDICTED: pentatricopeptide repeat-containi... 674 0.0
ref|XP_008443463.1| PREDICTED: pentatricopeptide repeat-containi... 672 0.0
ref|XP_010100741.1| hypothetical protein L484_005808 [Morus nota... 665 0.0
ref|XP_007025334.1| Pentatricopeptide, putative [Theobroma cacao... 665 0.0
ref|XP_002305733.2| hypothetical protein POPTR_0004s05810g, part... 664 0.0
ref|XP_012456795.1| PREDICTED: pentatricopeptide repeat-containi... 663 0.0
ref|XP_006467621.1| PREDICTED: pentatricopeptide repeat-containi... 662 0.0
ref|XP_007214267.1| hypothetical protein PRUPE_ppa025121mg [Prun... 661 0.0
ref|XP_010999774.1| PREDICTED: pentatricopeptide repeat-containi... 660 0.0
ref|XP_008225340.1| PREDICTED: pentatricopeptide repeat-containi... 660 0.0
gb|AHB18405.1| pentatricopeptide repeat-containing protein [Goss... 657 0.0
ref|XP_008366040.1| PREDICTED: pentatricopeptide repeat-containi... 657 0.0
ref|XP_013597041.1| PREDICTED: pentatricopeptide repeat-containi... 651 0.0
ref|XP_010518818.1| PREDICTED: pentatricopeptide repeat-containi... 651 0.0
ref|XP_009352737.1| PREDICTED: pentatricopeptide repeat-containi... 650 0.0
ref|XP_009132154.1| PREDICTED: pentatricopeptide repeat-containi... 649 0.0
ref|XP_013700306.1| PREDICTED: pentatricopeptide repeat-containi... 649 0.0
emb|CDX78889.1| BnaA01g09560D [Brassica napus] 649 0.0
>emb|CDO96840.1| unnamed protein product [Coffea canephora]
Length = 885
Score = 810 bits (2091), Expect = 0.0
Identities = 391/428 (91%), Positives = 412/428 (96%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNKRPDDVT 1531
DM+AKCGSMENAE VFSQMPAKDIVSWNTMIGGYSKNS ANEALSLFA MQP+KRPDDVT
Sbjct: 458 DMFAKCGSMENAEAVFSQMPAKDIVSWNTMIGGYSKNSLANEALSLFAKMQPHKRPDDVT 517
Query: 1530 ITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIF 1351
+TC+LPACASLAALDRG+EIHGY+LRNGLSSDHFVVNAL DMYVKCGALVMAKLLFRKI
Sbjct: 518 VTCILPACASLAALDRGQEIHGYILRNGLSSDHFVVNALIDMYVKCGALVMAKLLFRKIL 577
Query: 1350 SKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWR 1171
SKDLVSWTIMIAGYAMHGFGTEAVATF+KMRQAGIEPDEVSFISILYACSHSGLLD GWR
Sbjct: 578 SKDLVSWTIMIAGYAMHGFGTEAVATFRKMRQAGIEPDEVSFISILYACSHSGLLDAGWR 637
Query: 1170 FFNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCGCRIY 991
FFNIMRN+F+IEPNLEHYTCMVDLLARAGKLSKAYKFIK MPIEPDA VWGALLCGCRIY
Sbjct: 638 FFNIMRNEFYIEPNLEHYTCMVDLLARAGKLSKAYKFIKGMPIEPDATVWGALLCGCRIY 697
Query: 990 HDVDMAEKVAEQVFELEPENTGYYVLLANIYAEAEKWEEVKMLQGKIGKRALRKNPVCSW 811
HDVDMAEKVAE VFELEPENTG+YVLLANIYAEAEKWEEVK LQ KIGKRAL+KN CSW
Sbjct: 698 HDVDMAEKVAEHVFELEPENTGHYVLLANIYAEAEKWEEVKRLQEKIGKRALKKNSGCSW 757
Query: 810 IEVRGKVYIFVSGDSAYPQAKSIKFLLQDLRKKMNEQGHSSKQKYALINEDEMEKQVAIC 631
IE+RGK YIFVSGDSA+PQAKSIKFLL+DLR+KMNE GHSSKQKYALINEDE+EK+VA+C
Sbjct: 758 IEIRGKAYIFVSGDSAFPQAKSIKFLLRDLRRKMNELGHSSKQKYALINEDEIEKEVALC 817
Query: 630 GHSEKLAMAFGVLSLPPGKTIRVTKNIQVCGDCHEMAKFISKMLGREILLRDSSRFHHFK 451
GHSEKLAMAFGVLSLPP KTIRVTKN+++CGDCHEMAKFISKMLGREILLRDSSRFHHFK
Sbjct: 818 GHSEKLAMAFGVLSLPPSKTIRVTKNLRICGDCHEMAKFISKMLGREILLRDSSRFHHFK 877
Query: 450 DGSCSCRG 427
DGSCSCRG
Sbjct: 878 DGSCSCRG 885
Score = 149 bits (375), Expect = 1e-32
Identities = 85/240 (35%), Positives = 131/240 (54%), Gaps = 4/240 (1%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNK-RPDDV 1534
D+YAKCG M+ A VF M +IVSW +MI GY++ + EA+ LF M+ PD
Sbjct: 357 DVYAKCGDMDGAVCVFENMGEPNIVSWTSMIAGYAREGLSYEAIELFHEMRKKGIDPDVF 416
Query: 1533 TITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKI 1354
T+T L ACA +L+ G ++H Y+ + ++ V NAL DM+ KCG++ A+ +F ++
Sbjct: 417 TVTSTLHACACSGSLESGMKVHAYIKEKNMETNLVVSNALMDMFAKCGSMENAEAVFSQM 476
Query: 1353 FSKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGW 1174
+KD+VSW MI GY+ + EA++ F KM Q PD+V+ IL AC+ LD G
Sbjct: 477 PAKDIVSWNTMIGGYSKNSLANEALSLFAKM-QPHKRPDDVTVTCILPACASLAALDRGQ 535
Query: 1173 RFFN-IMRNQFHIEPNLEHY--TCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
I+RN + +H+ ++D+ + G L A K + R + D W ++ G
Sbjct: 536 EIHGYILRNGL----SSDHFVVNALIDMYVKCGALVMA-KLLFRKILSKDLVSWTIMIAG 590
Score = 144 bits (363), Expect = 2e-31
Identities = 82/257 (31%), Positives = 132/257 (51%), Gaps = 1/257 (0%)
Frame = -2
Query: 1704 YAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATM-QPNKRPDDVTI 1528
Y KCG + + +F +M +D+VSWN+MI GY N A + + F M + D ++
Sbjct: 258 YFKCGRSGSGQKLFDEMRERDVVSWNSMISGYVANGLAVKGIKFFMEMLRLGVDVDLASM 317
Query: 1527 TCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIFS 1348
L ACAS+ + R IH Y ++ G N L D+Y KCG + A +F +
Sbjct: 318 VSALAACASIKDMLLSRAIHAYAVKAGFDLKMPFTNTLLDVYAKCGDMDGAVCVFENMGE 377
Query: 1347 KDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWRF 1168
++VSWT MIAGYA G EA+ F +MR+ GI+PD + S L+AC+ SG L+ G +
Sbjct: 378 PNIVSWTSMIAGYAREGLSYEAIELFHEMRKKGIDPDVFTVTSTLHACACSGSLESGMKV 437
Query: 1167 FNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCGCRIYH 988
++ + ++E NL ++D+ A+ G + A +MP + D W ++ G Y
Sbjct: 438 HAYIKEK-NMETNLVVSNALMDMFAKCGSMENAEAVFSQMPAK-DIVSWNTMIGG---YS 492
Query: 987 DVDMAEKVAEQVFELEP 937
+A + +++P
Sbjct: 493 KNSLANEALSLFAKMQP 509
Score = 105 bits (261), Expect = 2e-19
Identities = 61/238 (25%), Positives = 115/238 (48%), Gaps = 3/238 (1%)
Frame = -2
Query: 1707 MYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATM-QPNKRPDDVT 1531
MY CG + +F + +K++ WN ++ Y+K E+++++ M + + T
Sbjct: 156 MYVSCGHLIEGRRIFDRSESKNVFLWNLLMNEYAKIGNFKESVNMYYRMLELGIEMNSYT 215
Query: 1530 ITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIF 1351
+C+L A+L + G ++H +L+ G S VVN+L Y KCG + LF ++
Sbjct: 216 FSCILKCFAALENVVEGEKVHEKILKLGFGSYSAVVNSLISFYFKCGRSGSGQKLFDEMR 275
Query: 1350 SKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACS--HSGLLDEG 1177
+D+VSW MI+GY +G + + F +M + G++ D S +S L AC+ LL
Sbjct: 276 ERDVVSWNSMISGYVANGLAVKGIKFFMEMLRLGVDVDLASMVSALAACASIKDMLLSRA 335
Query: 1176 WRFFNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
+ + + + ++D+ A+ G + A + M EP+ W +++ G
Sbjct: 336 IHAYAVKAG---FDLKMPFTNTLLDVYAKCGDMDGAVCVFENMG-EPNIVSWTSMIAG 389
Score = 71.6 bits (174), Expect = 2e-09
Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 4/184 (2%)
Frame = -2
Query: 1542 DDVTITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLF 1363
D T +L CA ++D GRE+H + RNG+ + + + L MYV CG L+ + +F
Sbjct: 111 DARTYCSLLQLCAEYKSIDNGREVHSIIERNGIETGGVLESKLVFMYVSCGHLIEGRRIF 170
Query: 1362 RKIFSKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLD 1183
+ SK++ W +++ YA G E+V + +M + GIE + +F IL + +
Sbjct: 171 DRSESKNVFLWNLLMNEYAKIGNFKESVNMYYRMLELGIEMNSYTFSCILKCFAALENVV 230
Query: 1182 EGWRFFNIMRNQFHIEPNLEHYTCMVDLLA----RAGKLSKAYKFIKRMPIEPDAAVWGA 1015
EG + ++ ++ Y+ +V+ L + G+ K M E D W +
Sbjct: 231 EGEKV-----HEKILKLGFGSYSAVVNSLISFYFKCGRSGSGQKLFDEMR-ERDVVSWNS 284
Query: 1014 LLCG 1003
++ G
Sbjct: 285 MISG 288
>ref|XP_010655542.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic [Vitis vinifera]
Length = 876
Score = 676 bits (1744), Expect = 0.0
Identities = 316/428 (73%), Positives = 369/428 (86%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNKRPDDVT 1531
DMYAKCGSM +A VFS+M KDIVSWNTMIGGYSKNS NEAL+LF MQ N +P+ +T
Sbjct: 447 DMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNSKPNSIT 506
Query: 1530 ITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIF 1351
+ C+LPACASLAAL+RG+EIHG++LRNG S D V NAL DMY+KCGAL +A+LLF I
Sbjct: 507 MACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIP 566
Query: 1350 SKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWR 1171
KDLVSWT+MIAGY MHG+G+EA+A F +MR +GIEPDEVSFISILYACSHSGLLDEGW
Sbjct: 567 EKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWG 626
Query: 1170 FFNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCGCRIY 991
FFN+MRN IEP EHY C+VDLLARAG LSKAYKFIK MPIEPDA +WGALLCGCRIY
Sbjct: 627 FFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIY 686
Query: 990 HDVDMAEKVAEQVFELEPENTGYYVLLANIYAEAEKWEEVKMLQGKIGKRALRKNPVCSW 811
HDV +AEKVAE VFELEPENTGYYVLLANIYAEAEKWEEVK L+ +IG+R LRKNP CSW
Sbjct: 687 HDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSW 746
Query: 810 IEVRGKVYIFVSGDSAYPQAKSIKFLLQDLRKKMNEQGHSSKQKYALINEDEMEKQVAIC 631
IE++GKV+IFV+GDS++P A I+ LL+ R +M E+GH K +YALI D+ EK++A+C
Sbjct: 747 IEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMALC 806
Query: 630 GHSEKLAMAFGVLSLPPGKTIRVTKNIQVCGDCHEMAKFISKMLGREILLRDSSRFHHFK 451
GHSEK+AMAFG+LSLPPGKT+RVTKN++VCGDCHEMAKF+SKM+ R+I+LRDS+RFHHFK
Sbjct: 807 GHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHHFK 866
Query: 450 DGSCSCRG 427
DGSCSCRG
Sbjct: 867 DGSCSCRG 874
Score = 149 bits (375), Expect = 1e-32
Identities = 83/238 (34%), Positives = 133/238 (55%), Gaps = 2/238 (0%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNK-RPDDV 1534
DMY+K G++ +A VF M + +VSW +MI GY++ ++ ++ LF M+ PD
Sbjct: 346 DMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIF 405
Query: 1533 TITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKI 1354
TIT +L ACA L+ G+++H Y+ N + SD FV NAL DMY KCG++ A +F ++
Sbjct: 406 TITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEM 465
Query: 1353 FSKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGW 1174
KD+VSW MI GY+ + EA+ F +M Q +P+ ++ IL AC+ L+ G
Sbjct: 466 QVKDIVSWNTMIGGYSKNSLPNEALNLFVEM-QYNSKPNSITMACILPACASLAALERGQ 524
Query: 1173 RFF-NIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
+I+RN F ++ ++ + +VD+ + G L A +P E D W ++ G
Sbjct: 525 EIHGHILRNGFSLDRHVAN--ALVDMYLKCGALGLARLLFDMIP-EKDLVSWTVMIAG 579
Score = 133 bits (334), Expect = 6e-28
Identities = 74/235 (31%), Positives = 122/235 (51%), Gaps = 1/235 (0%)
Frame = -2
Query: 1704 YAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQP-NKRPDDVTI 1528
Y K +E+A +F ++ +D++SWN+MI GY N + + L LF M D T+
Sbjct: 247 YFKIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATM 306
Query: 1527 TCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIFS 1348
V+ C++ L GR +HGY ++ + + N L DMY K G L A +F +
Sbjct: 307 VSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGE 366
Query: 1347 KDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWRF 1168
+ +VSWT MIAGYA G +V F +M + GI PD + +IL+AC+ +GLL+ G
Sbjct: 367 RSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDV 426
Query: 1167 FNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
N ++ ++ +L ++D+ A+ G + A+ M ++ D W ++ G
Sbjct: 427 HNYIKEN-KMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVK-DIVSWNTMIGG 479
Score = 121 bits (303), Expect = 2e-24
Identities = 70/267 (26%), Positives = 137/267 (51%), Gaps = 12/267 (4%)
Frame = -2
Query: 1707 MYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQP-NKRPDDVT 1531
MY CG + +F ++ + + WN ++ GY+K E+LSLF M+ + + T
Sbjct: 145 MYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGVKMNSYT 204
Query: 1530 ITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIF 1351
+CV+ A+ +++ G +H Y+ R G S + VVN+L Y K + A+ LF ++
Sbjct: 205 FSCVMKCYAASGSVEEGEGVHAYLSRLGFGSYNTVVNSLIAFYFKIRRVESARKLFDELG 264
Query: 1350 SKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWR 1171
+D++SW MI+GY +G + + F++M GI D + +S++ CS++G+L G
Sbjct: 265 DRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRA 324
Query: 1170 FFN-IMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG--- 1003
++ F E L + C++D+ +++G L+ A + + M E W +++ G
Sbjct: 325 LHGYAIKASFGKELTLNN--CLLDMYSKSGNLNSAIQVFETMG-ERSVVSWTSMIAGYAR 381
Query: 1002 -------CRIYHDVDMAEKVAEQVFEL 943
R++H+++ E ++ +F +
Sbjct: 382 EGLSDMSVRLFHEME-KEGISPDIFTI 407
Score = 74.3 bits (181), Expect = 3e-10
Identities = 45/178 (25%), Positives = 87/178 (48%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNKRPDDVT 1531
++Y C ++ + + + K I +N I + + A+ L P + T
Sbjct: 46 NLYHSCATIGTSVLPSETIDCK-ITDYNIEICRFCELGNLRRAMELI-NQSPKPDLELRT 103
Query: 1530 ITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIF 1351
VL CA L ++ GR IH + N + D + + L MYV CG L + +F K+
Sbjct: 104 YCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVA 163
Query: 1350 SKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEG 1177
++ + W +++ GYA G E+++ F++MR+ G++ + +F ++ + SG ++EG
Sbjct: 164 NEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGVKMNSYTFSCVMKCYAASGSVEEG 221
>ref|XP_011657608.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic [Cucumis sativus]
gi|700210517|gb|KGN65613.1| hypothetical protein
Csa_1G470290 [Cucumis sativus]
Length = 871
Score = 674 bits (1740), Expect = 0.0
Identities = 315/428 (73%), Positives = 367/428 (85%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNKRPDDVT 1531
DMYAKCGSM++A VFS M KD++SWNTMIGGY+KNS NEAL+LFA MQ +PD T
Sbjct: 442 DMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRESKPDGTT 501
Query: 1530 ITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIF 1351
+ C+LPACASLAALD+GREIHGY LRNG S D +V NA+ DMYVKCG LV+A+ LF I
Sbjct: 502 VACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIP 561
Query: 1350 SKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWR 1171
+KDLVSWT+MIAGY MHG+G+EA+ TF +MR GIEPDEVSFISILYACSHSGLLDEGW+
Sbjct: 562 NKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWK 621
Query: 1170 FFNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCGCRIY 991
FNIM+ + IEPNLEHY CMVDLLAR G L KA+KFIK MPI+PDA +WGALLCGCRI+
Sbjct: 622 IFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIH 681
Query: 990 HDVDMAEKVAEQVFELEPENTGYYVLLANIYAEAEKWEEVKMLQGKIGKRALRKNPVCSW 811
HDV +AEKVAE++FELEPENTGYYVLLANIYAEAEKWEEV+ L+ KIG+R L+KNP CSW
Sbjct: 682 HDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSW 741
Query: 810 IEVRGKVYIFVSGDSAYPQAKSIKFLLQDLRKKMNEQGHSSKQKYALINEDEMEKQVAIC 631
IE++GK+ IFV+GD + PQAK I+ LL+ LR KM E+G+S K YAL+N DE EK+VA+C
Sbjct: 742 IEIKGKINIFVAGDCSKPQAKKIELLLKRLRSKMKEEGYSPKTAYALLNADEREKEVALC 801
Query: 630 GHSEKLAMAFGVLSLPPGKTIRVTKNIQVCGDCHEMAKFISKMLGREILLRDSSRFHHFK 451
GHSEKLAMAFG+L+LPPGKTIRVTKN++VCGDCHEMAKF+SK REI+LRDSSRFHHFK
Sbjct: 802 GHSEKLAMAFGMLNLPPGKTIRVTKNLRVCGDCHEMAKFMSKSASREIILRDSSRFHHFK 861
Query: 450 DGSCSCRG 427
DGSCSCRG
Sbjct: 862 DGSCSCRG 869
Score = 139 bits (349), Expect = 1e-29
Identities = 81/238 (34%), Positives = 125/238 (52%), Gaps = 2/238 (0%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNKR-PDDV 1534
DMY+KCG + +A VF +M K +VSW +MI GY + ++ A+ LF M+ PD
Sbjct: 341 DMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVY 400
Query: 1533 TITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKI 1354
+T +L ACA L G+ +H Y+ N L ++ FV NALTDMY KCG++ A +F +
Sbjct: 401 AVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHM 460
Query: 1353 FSKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGW 1174
KD++SW MI GY + EA+ F +M++ +PD + IL AC+ LD+G
Sbjct: 461 KKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILPACASLAALDKGR 519
Query: 1173 RFFN-IMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
+RN + + + + +VD+ + G L A +P D W ++ G
Sbjct: 520 EIHGYALRNGYSEDKYVTN--AVVDMYVKCGLLVLARSLFDMIP-NKDLVSWTVMIAG 574
Score = 120 bits (300), Expect = 5e-24
Identities = 64/236 (27%), Positives = 122/236 (51%), Gaps = 1/236 (0%)
Frame = -2
Query: 1707 MYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATM-QPNKRPDDVT 1531
MY KCG ++ +VF ++ I WN MI YS + E+++LF M + +P+ T
Sbjct: 139 MYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYT 198
Query: 1530 ITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIF 1351
+ +L A++A ++ GR++HG + + G +S + VVN+L Y + A+ LF ++
Sbjct: 199 FSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELT 258
Query: 1350 SKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWR 1171
+D++SW MI+GY +G + F KM G++ D + +++ AC++ G L G
Sbjct: 259 DRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKV 318
Query: 1170 FFNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
+ ++ + ++D+ ++ G L+ A + +RM E W +++ G
Sbjct: 319 LHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMD-EKTVVSWTSMITG 373
Score = 118 bits (295), Expect = 2e-23
Identities = 71/227 (31%), Positives = 114/227 (50%), Gaps = 2/227 (0%)
Frame = -2
Query: 1677 AEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNKRPDDV-TITCVLPACAS 1501
A+ +F ++ +D++SWN+MI GY KN + + +F M D+ T+ V ACA+
Sbjct: 250 AQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACAN 309
Query: 1500 LAALDRGREIHGYVLRNG-LSSDHFVVNALTDMYVKCGALVMAKLLFRKIFSKDLVSWTI 1324
+ L G+ +H Y ++ L + N L DMY KCG L A +F ++ K +VSWT
Sbjct: 310 IGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTS 369
Query: 1323 MIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNIMRNQF 1144
MI GY G A+ F +M+ G+ PD + SIL AC+ +G L G + +R
Sbjct: 370 MITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIREN- 428
Query: 1143 HIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
++E N + D+ A+ G + A+ M + D W ++ G
Sbjct: 429 NLETNSFVSNALTDMYAKCGSMKDAHDVFSHMK-KKDVISWNTMIGG 474
Score = 65.5 bits (158), Expect = 1e-07
Identities = 39/136 (28%), Positives = 68/136 (50%)
Frame = -2
Query: 1584 ALSLFATMQPNKRPDDVTITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDM 1405
A+ L + Q N D +L CA ++ GR + + +G+ D + L M
Sbjct: 81 AMELLCSSQ-NSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFM 139
Query: 1404 YVKCGALVMAKLLFRKIFSKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSF 1225
YVKCG L +++F K+ + W +MI+ Y+ G E++ F++M + GI+P+ +F
Sbjct: 140 YVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTF 199
Query: 1224 ISILYACSHSGLLDEG 1177
SIL + ++EG
Sbjct: 200 SSILKCFAAVARVEEG 215
>ref|XP_008443463.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic [Cucumis melo]
Length = 871
Score = 672 bits (1735), Expect = 0.0
Identities = 314/428 (73%), Positives = 367/428 (85%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNKRPDDVT 1531
DMYAKCGSM++A VFS M KD++SWNTMIGGYSKN NEAL+LFA MQ +PD T
Sbjct: 442 DMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYSKNRLPNEALTLFAEMQSESKPDGTT 501
Query: 1530 ITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIF 1351
+ C+LPACASLAALDRGREIHGY LRNG S D +VVNAL DMYVKCG LV+A+ F I
Sbjct: 502 VACILPACASLAALDRGREIHGYALRNGYSEDKYVVNALLDMYVKCGLLVLARSFFDMIL 561
Query: 1350 SKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWR 1171
+KDLVSWT+MIAGY MHGFG+EA+ TF +MR GI+PDEVSFISILYACSHSGLLDEGW+
Sbjct: 562 NKDLVSWTVMIAGYGMHGFGSEAINTFNQMRMTGIKPDEVSFISILYACSHSGLLDEGWK 621
Query: 1170 FFNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCGCRIY 991
F+IM+ + IEPNLEHY CMVDLLAR G L KA+KFI+ MPI+PDA +WGALLCGCRI+
Sbjct: 622 IFSIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIQTMPIKPDATIWGALLCGCRIH 681
Query: 990 HDVDMAEKVAEQVFELEPENTGYYVLLANIYAEAEKWEEVKMLQGKIGKRALRKNPVCSW 811
HDV +AEKVAE++FELEPENTGYYVLLANIYAEAEKWEEV+ L+ +IG+R L+KNP C+W
Sbjct: 682 HDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKRIGQRGLKKNPGCNW 741
Query: 810 IEVRGKVYIFVSGDSAYPQAKSIKFLLQDLRKKMNEQGHSSKQKYALINEDEMEKQVAIC 631
IE++GKV IFV+GD + PQAK I+ LL+ LR KM E+G+S K YAL+N DE EK+VA+C
Sbjct: 742 IEIKGKVNIFVAGDCSKPQAKKIELLLKRLRSKMKEEGYSPKTTYALLNADEREKEVALC 801
Query: 630 GHSEKLAMAFGVLSLPPGKTIRVTKNIQVCGDCHEMAKFISKMLGREILLRDSSRFHHFK 451
GHSEKLAMAFG+L+LPPGKTIRVTKN++VCGDCHEMAKF+SK + REI+LRDSSRFHHFK
Sbjct: 802 GHSEKLAMAFGMLNLPPGKTIRVTKNLRVCGDCHEMAKFMSKSVSREIILRDSSRFHHFK 861
Query: 450 DGSCSCRG 427
DGSCSCRG
Sbjct: 862 DGSCSCRG 869
Score = 138 bits (347), Expect = 2e-29
Identities = 82/238 (34%), Positives = 125/238 (52%), Gaps = 2/238 (0%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNKR-PDDV 1534
DMY+KCG + +A VF +M K +VSW +MI GY + ++ A+ LF M+ PD
Sbjct: 341 DMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVY 400
Query: 1533 TITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKI 1354
+T +L ACA L G+ +H Y+ N L ++ FV NALTDMY KCG++ A +F +
Sbjct: 401 AVTSILHACAINGNLKSGQIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHM 460
Query: 1353 FSKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGW 1174
KD++SW MI GY+ + EA+ F +M Q+ +PD + IL AC+ LD G
Sbjct: 461 KKKDVISWNTMIGGYSKNRLPNEALTLFAEM-QSESKPDGTTVACILPACASLAALDRGR 519
Query: 1173 RFFN-IMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
+RN + + + ++D+ + G L A F M + D W ++ G
Sbjct: 520 EIHGYALRNGYSEDKYV--VNALLDMYVKCGLLVLARSFFD-MILNKDLVSWTVMIAG 574
Score = 123 bits (309), Expect = 4e-25
Identities = 65/236 (27%), Positives = 124/236 (52%), Gaps = 1/236 (0%)
Frame = -2
Query: 1707 MYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATM-QPNKRPDDVT 1531
MY KCG ++ ++F ++ + WN MI Y N E+++LF M + +P+ T
Sbjct: 139 MYVKCGDLKEGRMIFDKLSESKVFIWNLMISEYLGNGNYGESINLFKQMLELGIKPNSYT 198
Query: 1530 ITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIF 1351
+ VL A++A+++ GR++HG + + G +S + VVN+L Y + A+ LF ++
Sbjct: 199 FSSVLKCFAAVASVEEGRQVHGLIYKLGYNSYNTVVNSLISFYFVGRKVRCAQKLFDELT 258
Query: 1350 SKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWR 1171
+D++SW MI+GY +G + F KM G+E D + +++L AC+++G L G
Sbjct: 259 DRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVEIDLATMVNVLVACANTGTLLFGKV 318
Query: 1170 FFNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
+ ++ + ++D+ ++ G L+ A + +RM E W +++ G
Sbjct: 319 LHSYSIKAAALDREVRFNNTLLDMYSKCGDLNSAIRVFERMD-EKTVVSWTSMITG 373
Score = 120 bits (302), Expect = 3e-24
Identities = 72/227 (31%), Positives = 114/227 (50%), Gaps = 2/227 (0%)
Frame = -2
Query: 1677 AEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQP-NKRPDDVTITCVLPACAS 1501
A+ +F ++ +D++SWN+MI GY KN + + +F M D T+ VL ACA+
Sbjct: 250 AQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVEIDLATMVNVLVACAN 309
Query: 1500 LAALDRGREIHGYVLRNG-LSSDHFVVNALTDMYVKCGALVMAKLLFRKIFSKDLVSWTI 1324
L G+ +H Y ++ L + N L DMY KCG L A +F ++ K +VSWT
Sbjct: 310 TGTLLFGKVLHSYSIKAAALDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTS 369
Query: 1323 MIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNIMRNQF 1144
MI GY G A+ F +M+ G+ PD + SIL+AC+ +G L G + +R
Sbjct: 370 MITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILHACAINGNLKSGQIVHDYIREN- 428
Query: 1143 HIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
++E N + D+ A+ G + A+ M + D W ++ G
Sbjct: 429 NLETNSFVSNALTDMYAKCGSMKDAHDVFSHMK-KKDVISWNTMIGG 474
Score = 68.2 bits (165), Expect = 2e-08
Identities = 39/136 (28%), Positives = 69/136 (50%)
Frame = -2
Query: 1584 ALSLFATMQPNKRPDDVTITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDM 1405
A+ L + Q N D +L CA ++ GR +H + +G+ D + L M
Sbjct: 81 AMELLCSSQ-NSNFDLDAFCSILQLCAERKSIRDGRRVHSIIESSGVIIDGILGVKLVFM 139
Query: 1404 YVKCGALVMAKLLFRKIFSKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSF 1225
YVKCG L +++F K+ + W +MI+ Y +G E++ F++M + GI+P+ +F
Sbjct: 140 YVKCGDLKEGRMIFDKLSESKVFIWNLMISEYLGNGNYGESINLFKQMLELGIKPNSYTF 199
Query: 1224 ISILYACSHSGLLDEG 1177
S+L + ++EG
Sbjct: 200 SSVLKCFAAVASVEEG 215
>ref|XP_010100741.1| hypothetical protein L484_005808 [Morus notabilis]
gi|587895546|gb|EXB84044.1| hypothetical protein
L484_005808 [Morus notabilis]
Length = 877
Score = 665 bits (1717), Expect = 0.0
Identities = 315/428 (73%), Positives = 362/428 (84%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNKRPDDVT 1531
DMY+KCGSM++A +VFS+MPAKDI+SWNTMIGGYSKN NEAL LFA MQ + D +T
Sbjct: 449 DMYSKCGSMDDANLVFSRMPAKDIISWNTMIGGYSKNRLPNEALKLFAEMQGKSKADSIT 508
Query: 1530 ITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIF 1351
C+LPACASLAAL +GREIHG+VLRNG D V NAL DMYVKCG L +A++LF I
Sbjct: 509 AACILPACASLAALAKGREIHGHVLRNGYFQDRHVANALVDMYVKCGLLALAQVLFDMIP 568
Query: 1350 SKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWR 1171
KDL+SWT+MIAGY MHGFG EA+A F +MR AGIEPDEVSFISILYACSHSGL DEGW
Sbjct: 569 VKDLISWTVMIAGYGMHGFGREAIAAFDEMRHAGIEPDEVSFISILYACSHSGL-DEGWS 627
Query: 1170 FFNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCGCRIY 991
FFN+MRN++ IEP LEHY CMVDLL+R G LSKAY+FI++MPIEPDA +WGALLCGCR Y
Sbjct: 628 FFNVMRNEYSIEPMLEHYACMVDLLSRTGNLSKAYRFIRKMPIEPDATIWGALLCGCRTY 687
Query: 990 HDVDMAEKVAEQVFELEPENTGYYVLLANIYAEAEKWEEVKMLQGKIGKRALRKNPVCSW 811
HDV +AE+VAE VFELEP+NTGYYVLLANIYAEAEKWEEV+ L+ KIG+R L+KNP CSW
Sbjct: 688 HDVKLAERVAEHVFELEPDNTGYYVLLANIYAEAEKWEEVRKLREKIGRRGLKKNPGCSW 747
Query: 810 IEVRGKVYIFVSGDSAYPQAKSIKFLLQDLRKKMNEQGHSSKQKYALINEDEMEKQVAIC 631
IE++GKV IFV+GD + P AK I+ LL+ LR KM E+G KYALIN DEMEK+VA+C
Sbjct: 748 IEIKGKVNIFVAGDDSQPLAKKIESLLKRLRAKMKEEGFYPNMKYALINADEMEKEVALC 807
Query: 630 GHSEKLAMAFGVLSLPPGKTIRVTKNIQVCGDCHEMAKFISKMLGREILLRDSSRFHHFK 451
GHSEKLAMAFG+LSLPPGKTIRVTKN++VCGDCHE AKFISKM REI+LRDS+RFHHFK
Sbjct: 808 GHSEKLAMAFGMLSLPPGKTIRVTKNLRVCGDCHETAKFISKMSSREIVLRDSNRFHHFK 867
Query: 450 DGSCSCRG 427
DG CSCRG
Sbjct: 868 DGHCSCRG 875
Score = 153 bits (386), Expect = 5e-34
Identities = 83/238 (34%), Positives = 139/238 (58%), Gaps = 2/238 (0%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNK-RPDDV 1534
DMY+KCG ++ A VF + + +VSW +MI GY++ +NEA+ LF M+ N PD
Sbjct: 348 DMYSKCGELDAAVQVFEKTGERSVVSWTSMIAGYAREGRSNEAIRLFYEMERNGVSPDIF 407
Query: 1533 TITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKI 1354
TIT +L ACA +L+ G+++H Y+ +G+ S+ FV NAL DMY KCG++ A L+F ++
Sbjct: 408 TITSILHACACSGSLEDGKDVHNYIRESGMESNLFVCNALMDMYSKCGSMDDANLVFSRM 467
Query: 1353 FSKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGW 1174
+KD++SW MI GY+ + EA+ F +M Q + D ++ IL AC+ L +G
Sbjct: 468 PAKDIISWNTMIGGYSKNRLPNEALKLFAEM-QGKSKADSITAACILPACASLAALAKGR 526
Query: 1173 RFF-NIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
+++RN + + ++ + +VD+ + G L+ A +P++ D W ++ G
Sbjct: 527 EIHGHVLRNGYFQDRHVAN--ALVDMYVKCGLLALAQVLFDMIPVK-DLISWTVMIAG 581
Score = 149 bits (377), Expect = 6e-33
Identities = 83/235 (35%), Positives = 125/235 (53%), Gaps = 1/235 (0%)
Frame = -2
Query: 1704 YAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQP-NKRPDDVTI 1528
Y K G +E+A+ VF ++ +D++SWN+MI GYS N + + +F M D TI
Sbjct: 249 YFKSGRVESAQKVFDELTDRDVISWNSMISGYSSNGLGEKGVGIFGKMLSLGVNVDLATI 308
Query: 1527 TCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIFS 1348
L ACA++ GR +H Y ++ + N L DMY KCG L A +F K
Sbjct: 309 VNALVACANIGTHLLGRAVHAYAIKACFDGEIMFRNTLLDMYSKCGELDAAVQVFEKTGE 368
Query: 1347 KDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWRF 1168
+ +VSWT MIAGYA G EA+ F +M + G+ PD + SIL+AC+ SG L++G
Sbjct: 369 RSVVSWTSMIAGYAREGRSNEAIRLFYEMERNGVSPDIFTITSILHACACSGSLEDGKDV 428
Query: 1167 FNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
N +R + +E NL ++D+ ++ G + A RMP + D W ++ G
Sbjct: 429 HNYIR-ESGMESNLFVCNALMDMYSKCGSMDDANLVFSRMPAK-DIISWNTMIGG 481
Score = 110 bits (275), Expect = 4e-21
Identities = 64/236 (27%), Positives = 116/236 (49%), Gaps = 1/236 (0%)
Frame = -2
Query: 1707 MYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQP-NKRPDDVT 1531
MY CG + A +F + + WN +I Y+K E++SLF MQ + + T
Sbjct: 147 MYVNCGDLREARRIFDNIYTDRVFVWNLVINEYAKIRNFRESVSLFKKMQELGIQANSHT 206
Query: 1530 ITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIF 1351
++CVL +L L G IH Y+ + G + V+N+L Y K G + A+ +F ++
Sbjct: 207 LSCVLKCFGALGNLKEGERIHAYLYKLGFGCYNTVLNSLVAFYFKSGRVESAQKVFDELT 266
Query: 1350 SKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWR 1171
+D++SW MI+GY+ +G G + V F KM G+ D + ++ L AC++ G G R
Sbjct: 267 DRDVISWNSMISGYSSNGLGEKGVGIFGKMLSLGVNVDLATIVNALVACANIGTHLLG-R 325
Query: 1170 FFNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
+ + + + ++D+ ++ G+L A + ++ E W +++ G
Sbjct: 326 AVHAYAIKACFDGEIMFRNTLLDMYSKCGELDAAVQVFEKTG-ERSVVSWTSMIAG 380
Score = 65.1 bits (157), Expect = 2e-07
Identities = 45/181 (24%), Positives = 84/181 (46%), Gaps = 4/181 (2%)
Frame = -2
Query: 1533 TITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKI 1354
T VL CA +L G+ +H + +G+ D ++ L MYV CG L A+ +F I
Sbjct: 105 TYCSVLELCAQRKSLRDGKRVHSVIRDSGVEVDGYLGEKLVFMYVNCGDLREARRIFDNI 164
Query: 1353 FSKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGW 1174
++ + W ++I YA E+V+ F+KM++ GI+ + + +L G L EG
Sbjct: 165 YTDRVFVWNLVINEYAKIRNFRESVSLFKKMQELGIQANSHTLSCVLKCFGALGNLKEGE 224
Query: 1173 RFFNIMRNQFHIEPNLEHYTCMVDLLA----RAGKLSKAYKFIKRMPIEPDAAVWGALLC 1006
R + + + Y +++ L ++G++ A K + + D W +++
Sbjct: 225 RI-----HAYLYKLGFGCYNTVLNSLVAFYFKSGRVESAQKVFDEL-TDRDVISWNSMIS 278
Query: 1005 G 1003
G
Sbjct: 279 G 279
>ref|XP_007025334.1| Pentatricopeptide, putative [Theobroma cacao]
gi|508780700|gb|EOY27956.1| Pentatricopeptide, putative
[Theobroma cacao]
Length = 874
Score = 665 bits (1715), Expect = 0.0
Identities = 308/428 (71%), Positives = 366/428 (85%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNKRPDDVT 1531
DMYAKCGSME+A +FS+M KDI+SWNTMIGGYSKN NEAL + A M +PD T
Sbjct: 445 DMYAKCGSMEDANSIFSRMAVKDIISWNTMIGGYSKNCLPNEALKMLAAMLKELKPDSRT 504
Query: 1530 ITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIF 1351
+ C+LPACASLAAL+RG+EIHG++LRNG SD V NAL D+YVKCG L +A+LLF I
Sbjct: 505 LACILPACASLAALERGKEIHGHILRNGYFSDRHVANALVDLYVKCGVLALARLLFDMIS 564
Query: 1350 SKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWR 1171
SKDLVSWT+MIAGY MHGF EA+ TF +MR AGIEPDEVSFISILYACSHSGLL+EGWR
Sbjct: 565 SKDLVSWTVMIAGYGMHGFANEAITTFNEMRDAGIEPDEVSFISILYACSHSGLLEEGWR 624
Query: 1170 FFNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCGCRIY 991
FF IMRN ++IEP LEHY CMVDLL+R G LSKA+ FI+RMPI PDA +WGA+LCGCRIY
Sbjct: 625 FFYIMRNDYNIEPKLEHYACMVDLLSRTGNLSKAFHFIERMPIAPDATIWGAVLCGCRIY 684
Query: 990 HDVDMAEKVAEQVFELEPENTGYYVLLANIYAEAEKWEEVKMLQGKIGKRALRKNPVCSW 811
HDV +AE+VAE+VFELEPENTGYYVLLANIYAEAEKWEEVK ++ +IG++ LRKNP CSW
Sbjct: 685 HDVKLAERVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRVRERIGRKGLRKNPGCSW 744
Query: 810 IEVRGKVYIFVSGDSAYPQAKSIKFLLQDLRKKMNEQGHSSKQKYALINEDEMEKQVAIC 631
IE++GKV +FV+GDS++PQ+K I+ LL+ LR+KM +G+ K KYALIN D+M+K++A+C
Sbjct: 745 IEIKGKVNLFVAGDSSHPQSKKIESLLKKLRRKMKGEGYFPKTKYALINADDMQKEMALC 804
Query: 630 GHSEKLAMAFGVLSLPPGKTIRVTKNIQVCGDCHEMAKFISKMLGREILLRDSSRFHHFK 451
GHSEKLAMAFG+LSLPP KTIRVTKN+++CGDCHEMAKF+SK GREI+LRDS+RFHHFK
Sbjct: 805 GHSEKLAMAFGLLSLPPSKTIRVTKNLRICGDCHEMAKFMSKETGREIVLRDSNRFHHFK 864
Query: 450 DGSCSCRG 427
DG CSCRG
Sbjct: 865 DGYCSCRG 872
Score = 141 bits (356), Expect = 2e-30
Identities = 84/271 (30%), Positives = 148/271 (54%), Gaps = 4/271 (1%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQ-PNKRPDDV 1534
DMY+KCG ++ A VF +M +++VSW +MI GY+++ ++ A+ L M+ + D V
Sbjct: 344 DMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGQSDGAIRLLQQMEREGVKLDVV 403
Query: 1533 TITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKI 1354
IT VL ACA +L+ G+++H Y+ N + S+ FV NAL DMY KCG++ A +F ++
Sbjct: 404 AITSVLHACARSGSLENGKDVHDYIKANNVESNLFVCNALMDMYAKCGSMEDANSIFSRM 463
Query: 1353 FSKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGW 1174
KD++SW MI GY+ + EA+ M + ++PD + IL AC+ L+ G
Sbjct: 464 AVKDIISWNTMIGGYSKNCLPNEALKMLAAMLKE-LKPDSRTLACILPACASLAALERGK 522
Query: 1173 RFF-NIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCGCR 997
+I+RN + + ++ + +VDL + G L+ A + + M D W ++ G
Sbjct: 523 EIHGHILRNGYFSDRHVAN--ALVDLYVKCGVLALA-RLLFDMISSKDLVSWTVMIAGYG 579
Query: 996 IYHDVDMAEKVAEQVFE--LEPENTGYYVLL 910
++ + A ++ + +EP+ + +L
Sbjct: 580 MHGFANEAITTFNEMRDAGIEPDEVSFISIL 610
Score = 130 bits (328), Expect = 3e-27
Identities = 76/235 (32%), Positives = 121/235 (51%), Gaps = 1/235 (0%)
Frame = -2
Query: 1704 YAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATM-QPNKRPDDVTI 1528
Y K +E+A +F ++ +D++SWN+MI GY N A + L +F M D TI
Sbjct: 245 YFKGKRVESASELFDELIDRDVISWNSMISGYVSNGLAEKGLEVFKEMLYLGIDVDLATI 304
Query: 1527 TCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIFS 1348
VL CA+ L G+ +H ++ N L DMY KCG L A +F K+
Sbjct: 305 VTVLVGCANSGTLSLGKAVHALAIKACFERKLNFNNTLLDMYSKCGDLDGALRVFEKMGE 364
Query: 1347 KDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWRF 1168
+++VSWT MIAGY G A+ Q+M + G++ D V+ S+L+AC+ SG L+ G
Sbjct: 365 RNVVSWTSMIAGYTRDGQSDGAIRLLQQMEREGVKLDVVAITSVLHACARSGSLENGKDV 424
Query: 1167 FNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
+ ++ ++E NL ++D+ A+ G + A RM ++ D W ++ G
Sbjct: 425 HDYIKAN-NVESNLFVCNALMDMYAKCGSMEDANSIFSRMAVK-DIISWNTMIGG 477
Score = 123 bits (308), Expect = 6e-25
Identities = 69/252 (27%), Positives = 125/252 (49%), Gaps = 1/252 (0%)
Frame = -2
Query: 1704 YAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNK-RPDDVTI 1528
Y CG ++ +F +M K + WN M+ Y+K E++ LF M D T
Sbjct: 144 YVTCGDLKEGRGIFDEMEKKKVFLWNYMLNEYAKFGDFKESIYLFKMMMKKGIEVDSYTF 203
Query: 1527 TCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIFS 1348
+C+L A+ L G +HGY+L+ G S + VVN+L Y K + A LF ++
Sbjct: 204 SCILKCLAASGGLKEGERVHGYLLKLGFGSYNSVVNSLITFYFKGKRVESASELFDELID 263
Query: 1347 KDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWRF 1168
+D++SW MI+GY +G + + F++M GI+ D + +++L C++SG L G +
Sbjct: 264 RDVISWNSMISGYVSNGLAEKGLEVFKEMLYLGIDVDLATIVTVLVGCANSGTLSLG-KA 322
Query: 1167 FNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCGCRIYH 988
+ + + E L ++D+ ++ G L A + ++M E + W +++ G
Sbjct: 323 VHALAIKACFERKLNFNNTLLDMYSKCGDLDGALRVFEKMG-ERNVVSWTSMIAGYTRDG 381
Query: 987 DVDMAEKVAEQV 952
D A ++ +Q+
Sbjct: 382 QSDGAIRLLQQM 393
Score = 81.6 bits (200), Expect = 2e-12
Identities = 62/236 (26%), Positives = 106/236 (44%), Gaps = 3/236 (1%)
Frame = -2
Query: 1641 IVSWNTMIGGYSKNSFANEALSLFATMQPNKRPDDVTITCVLPACASLAALDRGREIHGY 1462
+ +N I + + + A+ L + M PN + T +L CA L +L G+++H
Sbjct: 66 VTDYNARIFQFCQLGNLHNAMELLS-MSPNSELESKTYCSILQLCADLKSLKDGKKVHSI 124
Query: 1461 VLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIFSKDLVSWTIMIAGYAMHGFGTEA 1282
+ NG++ D + + L YV CG L + +F ++ K + W M+ YA G E+
Sbjct: 125 INSNGVAVDEVLGSKLVSFYVTCGDLKEGRGIFDEMEKKKVFLWNYMLNEYAKFGDFKES 184
Query: 1281 VATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNIMRNQFHIEPNLEHYTCMVD 1102
+ F+ M + GIE D +F IL + SG L EG R + ++ Y +V+
Sbjct: 185 IYLFKMMMKKGIEVDSYTFSCILKCLAASGGLKEGERVHGYL-----LKLGFGSYNSVVN 239
Query: 1101 LLAR---AGKLSKAYKFIKRMPIEPDAAVWGALLCGCRIYHDVDMAEKVAEQVFEL 943
L GK ++ + I+ D W +++ G Y +AEK E E+
Sbjct: 240 SLITFYFKGKRVESASELFDELIDRDVISWNSMISG---YVSNGLAEKGLEVFKEM 292
>ref|XP_002305733.2| hypothetical protein POPTR_0004s05810g, partial [Populus trichocarpa]
gi|550340410|gb|EEE86244.2| hypothetical protein
POPTR_0004s05810g, partial [Populus trichocarpa]
Length = 778
Score = 664 bits (1712), Expect = 0.0
Identities = 308/428 (71%), Positives = 367/428 (85%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNKRPDDVT 1531
DMYAKCGSME+A VF +MP KDI+SWNTMIGGYSKNS NEALSLF M +PD T
Sbjct: 349 DMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLEMKPDGTT 408
Query: 1530 ITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIF 1351
+ C+LPACASLA+LDRG+E+HG++LRNG SD V NAL DMYVKCG V+A+LLF I
Sbjct: 409 LACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIP 468
Query: 1350 SKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWR 1171
+KDL++WT+MIAGY MHGFG A+ TF +MRQAGIEPDEVSFISILYACSHSGLLDEGWR
Sbjct: 469 TKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWR 528
Query: 1170 FFNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCGCRIY 991
FFN+M+++ +++P LEHY C+VDLLAR+GKL+ AYKFIK MPIEPDA +WGALL GCRI+
Sbjct: 529 FFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSGCRIH 588
Query: 990 HDVDMAEKVAEQVFELEPENTGYYVLLANIYAEAEKWEEVKMLQGKIGKRALRKNPVCSW 811
HDV +AEKVAE VFELEPENTGYYVLLAN YAEAEKWEEVK L+ KIG+R L+KNP CSW
Sbjct: 589 HDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEVKKLRQKIGRRGLKKNPGCSW 648
Query: 810 IEVRGKVYIFVSGDSAYPQAKSIKFLLQDLRKKMNEQGHSSKQKYALINEDEMEKQVAIC 631
IEV+ KV+IF++G+S++PQAK I+ LL+ LR KM E+G+ K +YALIN D ++K+ A+C
Sbjct: 649 IEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKEEGYFPKTRYALINADSLQKETALC 708
Query: 630 GHSEKLAMAFGVLSLPPGKTIRVTKNIQVCGDCHEMAKFISKMLGREILLRDSSRFHHFK 451
GHSEKLAMAFG+L+LPP +TIRV+KN++VCGDCHEMAKFISK LGREI+LRDS+RFHHFK
Sbjct: 709 GHSEKLAMAFGILNLPPARTIRVSKNLRVCGDCHEMAKFISKTLGREIVLRDSNRFHHFK 768
Query: 450 DGSCSCRG 427
DG C CRG
Sbjct: 769 DGVCCCRG 776
Score = 145 bits (365), Expect = 1e-31
Identities = 82/238 (34%), Positives = 131/238 (55%), Gaps = 2/238 (0%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATM-QPNKRPDDV 1534
DMYAKCG ++ A +VF M + +V+W ++I Y++ ++EA+ LF M + PD
Sbjct: 248 DMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIF 307
Query: 1533 TITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKI 1354
TIT VL ACA +L+ G+++H Y+ N + S+ FV NAL DMY KCG++ A +F ++
Sbjct: 308 TITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEM 367
Query: 1353 FSKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGW 1174
KD++SW MI GY+ + EA++ F M ++PD + IL AC+ LD G
Sbjct: 368 PVKDIISWNTMIGGYSKNSLPNEALSLFGDM-VLEMKPDGTTLACILPACASLASLDRGK 426
Query: 1173 RFF-NIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
+I+RN F + + + +VD+ + G A +P + D W ++ G
Sbjct: 427 EVHGHILRNGFFSDQQVAN--ALVDMYVKCGVPVLARLLFDMIPTK-DLITWTVMIAG 481
Score = 131 bits (329), Expect = 2e-27
Identities = 77/264 (29%), Positives = 133/264 (50%), Gaps = 5/264 (1%)
Frame = -2
Query: 1704 YAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATM-QPNKRPDDVTI 1528
Y K ++ A +F ++ +D++SWN+MI GY N F+ + + LF M D T+
Sbjct: 149 YLKIRRVDVARKLFDELSNRDVISWNSMISGYVANGFSEKGVELFKKMLYLGVDMDLATM 208
Query: 1527 TCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIFS 1348
+L ACA+ + GR +HG ++ + N L DMY KCG L A L+F +
Sbjct: 209 VSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSV 268
Query: 1347 KDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWRF 1168
+ +V+WT +IA YA G EA+ F +M + G+ PD + ++L+AC+ +G L+ G
Sbjct: 269 RTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDV 328
Query: 1167 FNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCGCRIYH 988
N +R ++ N+ ++D+ A+ G + A MP++ D W ++ G Y
Sbjct: 329 HNYIREN-DMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVK-DIISWNTMIGG---YS 383
Query: 987 DVDMAEKV----AEQVFELEPENT 928
+ + + V E++P+ T
Sbjct: 384 KNSLPNEALSLFGDMVLEMKPDGT 407
Score = 124 bits (312), Expect = 2e-25
Identities = 75/266 (28%), Positives = 137/266 (51%), Gaps = 11/266 (4%)
Frame = -2
Query: 1707 MYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQP-NKRPDDVT 1531
MY CG + ++F ++ + + WN M+ GY+K E++SLF M + T
Sbjct: 47 MYVTCGDLREGRLIFDKIRNEKVFLWNLMMNGYTKIGDFKESVSLFRQMLDLGVEVNSHT 106
Query: 1530 ITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIF 1351
++CVL A+L ++ G+ +HG++L+ GL S + VVN+L Y+K + +A+ LF ++
Sbjct: 107 VSCVLKCFAALGSVKEGKWVHGFLLKLGLGSYNAVVNSLIAFYLKIRRVDVARKLFDELS 166
Query: 1350 SKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWR 1171
++D++SW MI+GY +GF + V F+KM G++ D + +SIL AC++ G + G R
Sbjct: 167 NRDVISWNSMISGYVANGFSEKGVELFKKMLYLGVDMDLATMVSILQACANCGDVSLG-R 225
Query: 1170 FFNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLC----- 1006
+ + + ++D+ A+ G L A M + W +L+
Sbjct: 226 AVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVR-TVVTWTSLIAAYARE 284
Query: 1005 -----GCRIYHDVDMAEKVAEQVFEL 943
R++H++D E V+ +F +
Sbjct: 285 GLSDEAIRLFHEMD-REGVSPDIFTI 309
Score = 68.2 bits (165), Expect = 2e-08
Identities = 36/119 (30%), Positives = 64/119 (53%)
Frame = -2
Query: 1533 TITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKI 1354
T +L A L +L G+++H ++ +G+S D + + L MYV CG L +L+F KI
Sbjct: 5 TCCSILQLSAELKSLQDGKKVHSFICSSGISIDSVLGSKLVFMYVTCGDLREGRLIFDKI 64
Query: 1353 FSKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEG 1177
++ + W +M+ GY G E+V+ F++M G+E + + +L + G + EG
Sbjct: 65 RNEKVFLWNLMMNGYTKIGDFKESVSLFRQMLDLGVEVNSHTVSCVLKCFAALGSVKEG 123
>ref|XP_012456795.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic [Gossypium raimondii]
gi|763802760|gb|KJB69698.1| hypothetical protein
B456_011G038100 [Gossypium raimondii]
Length = 875
Score = 663 bits (1710), Expect = 0.0
Identities = 311/429 (72%), Positives = 367/429 (85%), Gaps = 1/429 (0%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNKRPDDVT 1531
DMYAKCGSME A VFS M KDI+SWNTM+GGYSKN NEAL FA M +PD T
Sbjct: 445 DMYAKCGSMEGANSVFSTMVVKDIISWNTMVGGYSKNCLPNEALKTFAAMLKELKPDSRT 504
Query: 1530 ITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIF 1351
+ C+LPACASL+AL+RG+EIHGY+LRNG SSD V NAL D+YVKCG L +A+LLF I
Sbjct: 505 MACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIP 564
Query: 1350 SKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWR 1171
SKDLVSWT+MIAGY MHG+G EA+ATF +MR AGIEPDEVSFISILYACSHSGLL++GWR
Sbjct: 565 SKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR 624
Query: 1170 FFNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCGCRIY 991
FF IM+N F+IEP LEHY CMVDLL+R G LSKAYKFI+ +PI PDA +WGALLCGCRIY
Sbjct: 625 FFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIY 684
Query: 990 HDVDMAEKVAEQVFELEPENTGYYVLLANIYAEAEKWEEVKMLQGKIGKRALRKNPVCSW 811
HD+++AEKVAE+VFELEPENTGYYVLLANIYAEAEKWEEVK ++ KIGK+ LRKNP CSW
Sbjct: 685 HDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSW 744
Query: 810 IEVRGKVYIFVSG-DSAYPQAKSIKFLLQDLRKKMNEQGHSSKQKYALINEDEMEKQVAI 634
IE++G+V +FVSG +S++P +K I+ LL+ +R+KM E+G+ K KYALIN DEM+K++A+
Sbjct: 745 IEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMAL 804
Query: 633 CGHSEKLAMAFGVLSLPPGKTIRVTKNIQVCGDCHEMAKFISKMLGREILLRDSSRFHHF 454
CGHSEKLAMAFG+L+LPP KTIRVTKN++VCGDCHEMAKF+SK REI+LRDS+RFHHF
Sbjct: 805 CGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHF 864
Query: 453 KDGSCSCRG 427
KDG CSCRG
Sbjct: 865 KDGYCSCRG 873
Score = 147 bits (371), Expect = 3e-32
Identities = 81/238 (34%), Positives = 134/238 (56%), Gaps = 2/238 (0%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNK-RPDDV 1534
DMY+KCG ++ A VF +M +++VSW +MI GY+++ +++ A+ L M+ + D V
Sbjct: 344 DMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVV 403
Query: 1533 TITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKI 1354
IT +L ACA +LD G+++H Y+ N ++S+ FV NAL DMY KCG++ A +F +
Sbjct: 404 AITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTM 463
Query: 1353 FSKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGW 1174
KD++SW M+ GY+ + EA+ TF M + ++PD + IL AC+ L+ G
Sbjct: 464 VVKDIISWNTMVGGYSKNCLPNEALKTFAAMLKE-LKPDSRTMACILPACASLSALERGK 522
Query: 1173 RFFN-IMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
I+RN + + ++ + +VDL + G L A +P D W ++ G
Sbjct: 523 EIHGYILRNGYSSDRHVAN--ALVDLYVKCGVLGLARLLFDMIP-SKDLVSWTVMIAG 577
Score = 125 bits (314), Expect = 1e-25
Identities = 74/235 (31%), Positives = 118/235 (50%), Gaps = 1/235 (0%)
Frame = -2
Query: 1704 YAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNKRPDDV-TI 1528
Y K E+A +F ++ +D++SWN+MI GY N L ++ M D+ TI
Sbjct: 245 YFKGKRSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATI 304
Query: 1527 TCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIFS 1348
VL CA L G+ +H +++ N L DMY KCG L A +F K+
Sbjct: 305 ISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGE 364
Query: 1347 KDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWRF 1168
+++VSWT MIAGY G+ A+ Q+M + G++ D V+ SIL+AC+ SG LD G
Sbjct: 365 RNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDV 424
Query: 1167 FNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
+ ++ ++ NL ++D+ A+ G + A M ++ D W ++ G
Sbjct: 425 HDYIKAN-NMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVK-DIISWNTMVGG 477
Score = 122 bits (306), Expect = 1e-24
Identities = 70/235 (29%), Positives = 119/235 (50%), Gaps = 1/235 (0%)
Frame = -2
Query: 1704 YAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATM-QPNKRPDDVTI 1528
YA CG ++ VF M K++ WN M+ Y+K E++ LF M + + T
Sbjct: 144 YATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEVNSYTF 203
Query: 1527 TCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIFS 1348
+CVL A+L +L G +HGY+L+ G S + VVN+L Y K A LF K+
Sbjct: 204 SCVLKCFAALGSLKEGECVHGYLLKLGFGSCNSVVNSLIAFYFKGKRSESASELFDKLCD 263
Query: 1347 KDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWRF 1168
+D++SW MI+GY +G + +++M GI+ D + IS+L C+ SG L G +
Sbjct: 264 RDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLG-KA 322
Query: 1167 FNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
+ + + E + ++D+ ++ G L A + ++M E + W +++ G
Sbjct: 323 VHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMG-ERNVVSWTSMIAG 376
Score = 62.4 bits (150), Expect = 1e-06
Identities = 35/119 (29%), Positives = 57/119 (47%)
Frame = -2
Query: 1533 TITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKI 1354
T VL CA L +L G+++H + N + D + L Y CG L + +F +
Sbjct: 101 TYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTM 160
Query: 1353 FSKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEG 1177
K++ W M++ YA G E++ F+ M + GIE + +F +L + G L EG
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEVNSYTFSCVLKCFAALGSLKEG 219
>ref|XP_006467621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Citrus sinensis]
Length = 872
Score = 662 bits (1709), Expect = 0.0
Identities = 310/428 (72%), Positives = 367/428 (85%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNKRPDDVT 1531
DMYAKCGSM +AE VF+QMP KDIVSWNTMIGGYSKNS NEAL LF M N PD VT
Sbjct: 443 DMYAKCGSMADAESVFNQMPVKDIVSWNTMIGGYSKNSCPNEALDLFVAMLQNFEPDGVT 502
Query: 1530 ITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIF 1351
+ C+LPACASLAAL+RGREIHGY+LR+G+S+D V NA+ DMYVKCG LV+A+ LF I
Sbjct: 503 MACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP 562
Query: 1350 SKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWR 1171
+KDL+SWTIMIAGY MHGFG +A+ATF MRQAGIEPDEVSFIS+LYACSHSGL+DEGWR
Sbjct: 563 AKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWR 622
Query: 1170 FFNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCGCRIY 991
FFN+MR + +IEP LEHY CMVDLL+R G LS+AY+FI+ MP+ PDA +WG+LLCGCRI+
Sbjct: 623 FFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH 682
Query: 990 HDVDMAEKVAEQVFELEPENTGYYVLLANIYAEAEKWEEVKMLQGKIGKRALRKNPVCSW 811
H+V +AEKVAE VFELEP+NTGYYVLLAN+YAEAEKWEEVK L+ KI +R L+KNP CSW
Sbjct: 683 HEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSW 742
Query: 810 IEVRGKVYIFVSGDSAYPQAKSIKFLLQDLRKKMNEQGHSSKQKYALINEDEMEKQVAIC 631
IE++GKV IFV+G S++P AK I+ LL+ LR +M +G+ K +YALIN DEMEK+VA+C
Sbjct: 743 IEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALC 802
Query: 630 GHSEKLAMAFGVLSLPPGKTIRVTKNIQVCGDCHEMAKFISKMLGREILLRDSSRFHHFK 451
GHSEKLAMAFG+L+LP G+TIRVTKN++VCGDCHEMAKF+SK REI+LRDS+RFHHFK
Sbjct: 803 GHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFK 862
Query: 450 DGSCSCRG 427
DG CSCRG
Sbjct: 863 DGRCSCRG 870
Score = 142 bits (358), Expect = 9e-31
Identities = 83/238 (34%), Positives = 128/238 (53%), Gaps = 2/238 (0%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATM-QPNKRPDDV 1534
DMY+KCG ++ A VF +M + +VSW +MI GY++ + A+ LF M + PD
Sbjct: 342 DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 401
Query: 1533 TITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKI 1354
IT +L ACA L+ G+++H Y+ N + S +V NAL DMY KCG++ A+ +F ++
Sbjct: 402 AITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 461
Query: 1353 FSKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGW 1174
KD+VSW MI GY+ + EA+ F M Q EPD V+ IL AC+ L+ G
Sbjct: 462 PVKDIVSWNTMIGGYSKNSCPNEALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGR 520
Query: 1173 RFFN-IMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
I+R+ + N+ + +VD+ + G L A +P + D W ++ G
Sbjct: 521 EIHGYILRHGISADRNVAN--AIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAG 575
Score = 137 bits (346), Expect = 2e-29
Identities = 81/235 (34%), Positives = 125/235 (53%), Gaps = 1/235 (0%)
Frame = -2
Query: 1704 YAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATM-QPNKRPDDVTI 1528
Y K +++A +F ++ +D+VSWN MI GY N A + L +F M D T+
Sbjct: 243 YFKSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 302
Query: 1527 TCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIFS 1348
VL CA+ AL GR +H + L+ S + N L DMY KCG L A +F K+
Sbjct: 303 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 362
Query: 1347 KDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWRF 1168
+ +VSWT MIAGYA G A+ F+ M + GIEPD + SIL+AC+ GLL+ G
Sbjct: 363 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 422
Query: 1167 FNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
+ ++ ++ +L ++D+ A+ G ++ A +MP++ D W ++ G
Sbjct: 423 HDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGG 475
Score = 108 bits (269), Expect = 2e-20
Identities = 62/236 (26%), Positives = 114/236 (48%), Gaps = 1/236 (0%)
Frame = -2
Query: 1707 MYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQP-NKRPDDVT 1531
M+ CG ++ VF+++ + WN ++ YSK E+L LF MQ D T
Sbjct: 141 MFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYT 200
Query: 1530 ITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIF 1351
+CVL A + + G +HG++L+ G ++ V+N+L Y K + A LF ++
Sbjct: 201 FSCVLKCLAVVGNVKEGESVHGFMLKLGFGCNNTVLNSLITYYFKSRRVKDAHKLFDELS 260
Query: 1350 SKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWR 1171
+D+VSW MI+GY +G + + F++M G D + +++L C++ G L G R
Sbjct: 261 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG-R 319
Query: 1170 FFNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
+ + + ++D+ ++ G L A + ++M E W +++ G
Sbjct: 320 AVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAG 374
Score = 72.0 bits (175), Expect = 2e-09
Identities = 59/248 (23%), Positives = 114/248 (45%), Gaps = 3/248 (1%)
Frame = -2
Query: 1635 SWNTMIGGYSKNSFANEALSLFATMQPNKRPDDVTITCVLPACASLAALDRGREIHGYVL 1456
++N IG + + +A+ + + + +K D T +L CA L +L+ G+++H +
Sbjct: 65 NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI-DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
Query: 1455 RNGLSSDHFVVNA-LTDMYVKCGALVMAKLLFRKIFSKDLVSWTIMIAGYAMHGFGTEAV 1279
+G+ D V+ + L M+V CG L + +F KI + + W +++ Y+ G E++
Sbjct: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
Query: 1278 ATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNIMRNQFHIEPNLEHYTCMVDL 1099
F+KM+ GI D +F +L + G + EG M + N ++
Sbjct: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNVKEGESVHGFML-KLGFGCNNTVLNSLITY 242
Query: 1098 LARAGKLSKAYKFIKRMPIEPDAAVWGALLCGCRIYHDVDMAEKVAEQVFELEPE--NTG 925
++ ++ A+K + + D W ++ G +A VAE+ E+ E N G
Sbjct: 243 YFKSRRVKDAHKLFDELS-DRDVVSWNCMISGY-------IANGVAEKGLEVFKEMLNLG 294
Query: 924 YYVLLANI 901
+ V LA +
Sbjct: 295 FNVDLATM 302
>ref|XP_007214267.1| hypothetical protein PRUPE_ppa025121mg [Prunus persica]
gi|462410132|gb|EMJ15466.1| hypothetical protein
PRUPE_ppa025121mg [Prunus persica]
Length = 796
Score = 661 bits (1705), Expect = 0.0
Identities = 310/428 (72%), Positives = 366/428 (85%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNKRPDDVT 1531
DMYAKCGSME+A VFS MP KDIVSWNTMIGGYSKN NEAL LF+ MQ +PD +T
Sbjct: 367 DMYAKCGSMEDAHSVFSSMPVKDIVSWNTMIGGYSKNCLPNEALKLFSEMQQKSKPDGMT 426
Query: 1530 ITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIF 1351
I VLPACASLAAL+RG+EIHG++LRNG SD +V NAL DMYVKCG LV+A+LLF I
Sbjct: 427 IASVLPACASLAALNRGQEIHGHILRNGYFSDRYVANALVDMYVKCGVLVLARLLFDIIP 486
Query: 1350 SKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWR 1171
KDL+SWT+++AGY MHGFG+EA+ F +MR++GI+PD +SFISILYACSHSGLLDE WR
Sbjct: 487 IKDLISWTVIVAGYGMHGFGSEAITAFNEMRKSGIKPDSISFISILYACSHSGLLDEAWR 546
Query: 1170 FFNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCGCRIY 991
FF+ MRN + I P LEHY CMVDLLAR G L+KAYKFI +MPIEPDA +WG+LLCGCRI+
Sbjct: 547 FFDSMRNDYSIVPKLEHYACMVDLLARTGNLTKAYKFINKMPIEPDATIWGSLLCGCRIH 606
Query: 990 HDVDMAEKVAEQVFELEPENTGYYVLLANIYAEAEKWEEVKMLQGKIGKRALRKNPVCSW 811
HDV +AEKVAE+VFELEPENTGYYVLLANIYAEAEKWEEVK L+ +IG++ L+KNP CSW
Sbjct: 607 HDVKLAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRQGLKKNPGCSW 666
Query: 810 IEVRGKVYIFVSGDSAYPQAKSIKFLLQDLRKKMNEQGHSSKQKYALINEDEMEKQVAIC 631
IE++GKV IFV+G+S++PQA I+ LL+ LR KM E+G+S K +YALIN DEMEK+VA+C
Sbjct: 667 IEIKGKVQIFVAGNSSHPQATKIESLLKRLRLKMKEEGYSPKMQYALINADEMEKEVALC 726
Query: 630 GHSEKLAMAFGVLSLPPGKTIRVTKNIQVCGDCHEMAKFISKMLGREILLRDSSRFHHFK 451
GHSEKLA+AFG+L+LPPGKTIRVTKN++VC DCHEMAKFISK REI+LRDS+RFHH K
Sbjct: 727 GHSEKLAIAFGILNLPPGKTIRVTKNLRVCSDCHEMAKFISKTSRREIVLRDSNRFHHMK 786
Query: 450 DGSCSCRG 427
DG CSCRG
Sbjct: 787 DGICSCRG 794
Score = 155 bits (393), Expect = 8e-35
Identities = 87/238 (36%), Positives = 136/238 (57%), Gaps = 2/238 (0%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNK-RPDDV 1534
DMY+KCG + +A VF +M + +VSW +MI GY + ++EA+ LF+ M+ N PD
Sbjct: 266 DMYSKCGDLSSATQVFGKMGQRSVVSWTSMIAGYVREGLSDEAIELFSEMERNDVSPDVY 325
Query: 1533 TITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKI 1354
TIT +L ACA +L +GR+IH Y+ +G+ S FV N L DMY KCG++ A +F +
Sbjct: 326 TITSILHACACNGSLKKGRDIHKYIREHGMDSSLFVCNTLMDMYAKCGSMEDAHSVFSSM 385
Query: 1353 FSKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGW 1174
KD+VSW MI GY+ + EA+ F +M+Q +PD ++ S+L AC+ L+ G
Sbjct: 386 PVKDIVSWNTMIGGYSKNCLPNEALKLFSEMQQKS-KPDGMTIASVLPACASLAALNRGQ 444
Query: 1173 RFF-NIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
+I+RN + + + + +VD+ + G L A +PI+ D W ++ G
Sbjct: 445 EIHGHILRNGYFSDRYVAN--ALVDMYVKCGVLVLARLLFDIIPIK-DLISWTVIVAG 499
Score = 135 bits (340), Expect = 1e-28
Identities = 76/235 (32%), Positives = 121/235 (51%), Gaps = 1/235 (0%)
Frame = -2
Query: 1704 YAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQP-NKRPDDVTI 1528
Y K +E+A VF ++ +D++SWN+MI Y N A + + +F M D T+
Sbjct: 167 YFKNRIIESARKVFDELSDRDVISWNSMISAYVANGLAEKGVEIFRQMLSLGVDVDLATV 226
Query: 1527 TCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIFS 1348
VL AC+ L GR +H Y ++ L D N + DMY KCG L A +F K+
Sbjct: 227 INVLMACSDGGNLSLGRALHSYAIKTCLDMDIMFYNNVLDMYSKCGDLSSATQVFGKMGQ 286
Query: 1347 KDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWRF 1168
+ +VSWT MIAGY G EA+ F +M + + PD + SIL+AC+ +G L +G
Sbjct: 287 RSVVSWTSMIAGYVREGLSDEAIELFSEMERNDVSPDVYTITSILHACACNGSLKKGRDI 346
Query: 1167 FNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
+R + ++ +L ++D+ A+ G + A+ MP++ D W ++ G
Sbjct: 347 HKYIR-EHGMDSSLFVCNTLMDMYAKCGSMEDAHSVFSSMPVK-DIVSWNTMIGG 399
Score = 118 bits (296), Expect = 1e-23
Identities = 71/257 (27%), Positives = 129/257 (50%), Gaps = 1/257 (0%)
Frame = -2
Query: 1707 MYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQP-NKRPDDVT 1531
M+ KCG + A VF ++ + WN MI Y+K E + LF MQ + + T
Sbjct: 65 MFVKCGDLREARRVFDKLSNGKVFLWNLMINEYAKVRNFREGIHLFRKMQELGIQANSYT 124
Query: 1530 ITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIF 1351
+C+L +SL + G +HGY+ + G SD+ V N+L Y K + A+ +F ++
Sbjct: 125 FSCILKCFSSLGYVREGEWVHGYLYKLGFGSDNTVGNSLMAFYFKNRIIESARKVFDELS 184
Query: 1350 SKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWR 1171
+D++SW MI+ Y +G + V F++M G++ D + I++L ACS G L G R
Sbjct: 185 DRDVISWNSMISAYVANGLAEKGVEIFRQMLSLGVDVDLATVINVLMACSDGGNLSLG-R 243
Query: 1170 FFNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCGCRIY 991
+ + ++ ++ Y ++D+ ++ G LS A + +M + W +++ G Y
Sbjct: 244 ALHSYAIKTCLDMDIMFYNNVLDMYSKCGDLSSATQVFGKMG-QRSVVSWTSMIAG---Y 299
Query: 990 HDVDMAEKVAEQVFELE 940
++++ E E+E
Sbjct: 300 VREGLSDEAIELFSEME 316
Score = 67.8 bits (164), Expect = 3e-08
Identities = 39/115 (33%), Positives = 59/115 (51%)
Frame = -2
Query: 1521 VLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIFSKD 1342
VL CA L +L G+ +H + NG D + L M+VKCG L A+ +F K+ +
Sbjct: 27 VLELCAGLKSLQDGKRVHSVICNNGAEVDGPLGAKLVFMFVKCGDLREARRVFDKLSNGK 86
Query: 1341 LVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEG 1177
+ W +MI YA E + F+KM++ GI+ + +F IL S G + EG
Sbjct: 87 VFLWNLMINEYAKVRNFREGIHLFRKMQELGIQANSYTFSCILKCFSSLGYVREG 141
>ref|XP_010999774.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic [Populus euphratica]
Length = 879
Score = 660 bits (1704), Expect = 0.0
Identities = 306/428 (71%), Positives = 367/428 (85%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNKRPDDVT 1531
DMYAKCGSME+A VF ++P KDI+SWNTMIGGYSKNS NEALSLF M +PD T
Sbjct: 450 DMYAKCGSMEDANSVFLEIPVKDIISWNTMIGGYSKNSLPNEALSLFGAMVLEMKPDGTT 509
Query: 1530 ITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIF 1351
+ C+LPACASLA+LD+G+E+HG++LRNG SD V NAL DMYVKCG V+A+LLF I
Sbjct: 510 LACILPACASLASLDKGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIP 569
Query: 1350 SKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWR 1171
+KDL++WT+MIAGY MHGFG A+ TF +MR AGIEPDEVSFISILYACSHSGLL+EGWR
Sbjct: 570 TKDLITWTVMIAGYGMHGFGNNAITTFNEMRLAGIEPDEVSFISILYACSHSGLLEEGWR 629
Query: 1170 FFNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCGCRIY 991
FFN+M+++ +I+P LEHY C+VDLLAR+GKL+ AYKFIK MPIEPDA +WGALL GCRI+
Sbjct: 630 FFNVMKDECNIKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSGCRIH 689
Query: 990 HDVDMAEKVAEQVFELEPENTGYYVLLANIYAEAEKWEEVKMLQGKIGKRALRKNPVCSW 811
HDV +AEKVAE VFELEPENTGYYVLLAN YAEAEKWEEVK L+ KIG+R L+KNP CSW
Sbjct: 690 HDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEVKKLRQKIGQRGLKKNPGCSW 749
Query: 810 IEVRGKVYIFVSGDSAYPQAKSIKFLLQDLRKKMNEQGHSSKQKYALINEDEMEKQVAIC 631
IEV+ K++IF+SG+S++PQAK I+ LL+ LR KM E+G+ K +YALIN D ++K+ A+C
Sbjct: 750 IEVKSKIHIFLSGNSSHPQAKKIEVLLKRLRSKMKEEGYFPKTRYALINADSLQKETALC 809
Query: 630 GHSEKLAMAFGVLSLPPGKTIRVTKNIQVCGDCHEMAKFISKMLGREILLRDSSRFHHFK 451
GHSEKLAMAFG+L+LPPG+TIRV+KN++VCGDCHEMAKFISK LGREI+LRDS+RFHHFK
Sbjct: 810 GHSEKLAMAFGILNLPPGRTIRVSKNLRVCGDCHEMAKFISKTLGREIVLRDSNRFHHFK 869
Query: 450 DGSCSCRG 427
DG C CRG
Sbjct: 870 DGVCCCRG 877
Score = 145 bits (365), Expect = 1e-31
Identities = 83/238 (34%), Positives = 131/238 (55%), Gaps = 2/238 (0%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATM-QPNKRPDDV 1534
DMYAKCG ++ A VF M + +V+W ++I Y++ ++EA+ LF M + PD
Sbjct: 349 DMYAKCGVLDGAIRVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIF 408
Query: 1533 TITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKI 1354
TIT VL ACA +L+ G+++H Y+ N + S+ FV NAL DMY KCG++ A +F +I
Sbjct: 409 TITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEI 468
Query: 1353 FSKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGW 1174
KD++SW MI GY+ + EA++ F M ++PD + IL AC+ LD+G
Sbjct: 469 PVKDIISWNTMIGGYSKNSLPNEALSLFGAM-VLEMKPDGTTLACILPACASLASLDKGK 527
Query: 1173 RFF-NIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
+I+RN F + + + +VD+ + G A +P + D W ++ G
Sbjct: 528 EVHGHILRNGFFSDQQVAN--ALVDMYVKCGVPVLARLLFDMIPTK-DLITWTVMIAG 582
Score = 129 bits (324), Expect = 8e-27
Identities = 70/235 (29%), Positives = 123/235 (52%), Gaps = 1/235 (0%)
Frame = -2
Query: 1704 YAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNKRPDDV-TI 1528
Y K ++ A +F ++ +D++SWN+MI GY N F+ + + LF M + D+ T+
Sbjct: 250 YLKMRRVDVARKLFDELTDRDVISWNSMISGYVANGFSEKGVELFKKMLYSGVDMDLATM 309
Query: 1527 TCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIFS 1348
+L ACA+ + GR +HG ++ + N L DMY KCG L A +F +
Sbjct: 310 VSILQACANCGYVSLGRAVHGSAVKACVHGKTTFCNTLLDMYAKCGVLDGAIRVFDLMSV 369
Query: 1347 KDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWRF 1168
+ +V+WT +IA YA G EA+ F +M + G+ PD + ++L+AC+ +G L+ G
Sbjct: 370 RTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDV 429
Query: 1167 FNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
N +R ++ N+ ++D+ A+ G + A +P++ D W ++ G
Sbjct: 430 HNYIREN-DMQSNIFVCNALMDMYAKCGSMEDANSVFLEIPVK-DIISWNTMIGG 482
Score = 127 bits (319), Expect = 3e-26
Identities = 74/266 (27%), Positives = 137/266 (51%), Gaps = 11/266 (4%)
Frame = -2
Query: 1707 MYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQP-NKRPDDVT 1531
MY CG + +F ++ + + WN M+ GY+K E++SLF M + T
Sbjct: 148 MYVTCGDLREGRPIFDKIRNEKVFLWNLMMNGYTKIGDFKESVSLFRQMLDLGVEVNSHT 207
Query: 1530 ITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIF 1351
++C+L A+L ++ G+ +HG++L+ GL S + VVN+L Y+K + +A+ LF ++
Sbjct: 208 VSCILKCFAALGSVKEGKWVHGFLLKLGLGSCNAVVNSLIAFYLKMRRVDVARKLFDELT 267
Query: 1350 SKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWR 1171
+D++SW MI+GY +GF + V F+KM +G++ D + +SIL AC++ G + G R
Sbjct: 268 DRDVISWNSMISGYVANGFSEKGVELFKKMLYSGVDMDLATMVSILQACANCGYVSLG-R 326
Query: 1170 FFNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLC----- 1006
+ + + ++D+ A+ G L A + M + W +L+
Sbjct: 327 AVHGSAVKACVHGKTTFCNTLLDMYAKCGVLDGAIRVFDLMSVR-TVVTWTSLIAAYARE 385
Query: 1005 -----GCRIYHDVDMAEKVAEQVFEL 943
R++H++D E V+ +F +
Sbjct: 386 GLSDEAIRLFHEMD-REGVSPDIFTI 410
Score = 74.3 bits (181), Expect = 3e-10
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 2/173 (1%)
Frame = -2
Query: 1689 SMENAEVVFSQMPAKD--IVSWNTMIGGYSKNSFANEALSLFATMQPNKRPDDVTITCVL 1516
S + V S +KD I WN I + ++A+ L M P + T +L
Sbjct: 53 SYDKVSVFSSPAQSKDYKITDWNKKIYEVCEMGNIDKAIELLY-MSPKAEIESRTCCSIL 111
Query: 1515 PACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIFSKDLV 1336
A L +L G+++H ++ +G+S D + + L MYV CG L + +F KI ++ +
Sbjct: 112 QLSAELKSLQDGKKVHSFICSSGISIDSVLGSKLVFMYVTCGDLREGRPIFDKIRNEKVF 171
Query: 1335 SWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEG 1177
W +M+ GY G E+V+ F++M G+E + + IL + G + EG
Sbjct: 172 LWNLMMNGYTKIGDFKESVSLFRQMLDLGVEVNSHTVSCILKCFAALGSVKEG 224
>ref|XP_008225340.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic [Prunus mume]
Length = 878
Score = 660 bits (1704), Expect = 0.0
Identities = 310/428 (72%), Positives = 365/428 (85%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNKRPDDVT 1531
DMYAKCGSME+A VFS MP KDIVSWNTMIGGYSKN NEAL LF+ MQ +PD +T
Sbjct: 449 DMYAKCGSMEDAHSVFSNMPVKDIVSWNTMIGGYSKNCLPNEALKLFSEMQQKSKPDGMT 508
Query: 1530 ITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIF 1351
I VLPACASLAAL+RG+EIHG++LRNG SD +V NAL DMYVKCG LV+A+LLF I
Sbjct: 509 IASVLPACASLAALNRGQEIHGHILRNGYFSDRYVANALVDMYVKCGVLVLARLLFDIIP 568
Query: 1350 SKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWR 1171
KDL+SWT+++AGY MHG G EA+ F +MR++GI+PD +SFISILYACSHSGLLDE WR
Sbjct: 569 MKDLISWTVIVAGYGMHGLGREAITAFNEMRKSGIKPDSISFISILYACSHSGLLDEAWR 628
Query: 1170 FFNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCGCRIY 991
FF+ MRN + I P LEHY CMVDLLAR G L+KAYKFI +MPIEPDA +WG+LLCGCRI+
Sbjct: 629 FFDSMRNDYSIVPKLEHYACMVDLLARTGNLTKAYKFINKMPIEPDATIWGSLLCGCRIH 688
Query: 990 HDVDMAEKVAEQVFELEPENTGYYVLLANIYAEAEKWEEVKMLQGKIGKRALRKNPVCSW 811
HDV +AEKVAE+VFELEPENTGYYVLLANIYAEAEKWEEVK L+ +IG++ L+KNP CSW
Sbjct: 689 HDVKLAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRQGLKKNPGCSW 748
Query: 810 IEVRGKVYIFVSGDSAYPQAKSIKFLLQDLRKKMNEQGHSSKQKYALINEDEMEKQVAIC 631
IE++GKV IFV+G+S++PQA I+ LL+ LR KM E+G+S K +YALIN DEMEK+VA+C
Sbjct: 749 IEIKGKVQIFVAGNSSHPQATKIESLLKRLRLKMKEEGYSPKMQYALINADEMEKEVALC 808
Query: 630 GHSEKLAMAFGVLSLPPGKTIRVTKNIQVCGDCHEMAKFISKMLGREILLRDSSRFHHFK 451
GHSEKLA+AFG+L+LPPGKTIRVTKN++VC DCHEMAKFISK REI+LRDS+RFHH K
Sbjct: 809 GHSEKLAIAFGILNLPPGKTIRVTKNLRVCSDCHEMAKFISKTSRREIVLRDSNRFHHMK 868
Query: 450 DGSCSCRG 427
DGSCSCRG
Sbjct: 869 DGSCSCRG 876
Score = 154 bits (388), Expect = 3e-34
Identities = 86/238 (36%), Positives = 136/238 (57%), Gaps = 2/238 (0%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNK-RPDDV 1534
DMY+KCG + +A VF +M + +VSW +MI GY + ++EA+ LF+ M+ N PD
Sbjct: 348 DMYSKCGDLSSATQVFGKMGQRSVVSWTSMIAGYVREGLSDEAIELFSEMERNGVSPDVY 407
Query: 1533 TITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKI 1354
TIT +L ACA +L +GR+IH Y+ +G+ S FV N L DMY KCG++ A +F +
Sbjct: 408 TITSILHACACNGSLKKGRDIHKYIREHGMDSGLFVCNTLMDMYAKCGSMEDAHSVFSNM 467
Query: 1353 FSKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGW 1174
KD+VSW MI GY+ + EA+ F +M+Q +PD ++ S+L AC+ L+ G
Sbjct: 468 PVKDIVSWNTMIGGYSKNCLPNEALKLFSEMQQKS-KPDGMTIASVLPACASLAALNRGQ 526
Query: 1173 RFF-NIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
+I+RN + + + + +VD+ + G L A +P++ D W ++ G
Sbjct: 527 EIHGHILRNGYFSDRYVAN--ALVDMYVKCGVLVLARLLFDIIPMK-DLISWTVIVAG 581
Score = 139 bits (350), Expect = 8e-30
Identities = 78/235 (33%), Positives = 123/235 (52%), Gaps = 1/235 (0%)
Frame = -2
Query: 1704 YAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNKRPDDV-TI 1528
Y K +E+A VF ++ +D++SWN+MI Y N A++ + +F M D+ TI
Sbjct: 249 YFKNRRIESARKVFDELSDRDVISWNSMISAYVSNGLADKGVDIFRQMLSLGIDVDLATI 308
Query: 1527 TCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIFS 1348
VL AC+ L GR +H Y ++ L D N + DMY KCG L A +F K+
Sbjct: 309 INVLMACSDGGNLSLGRALHSYAIKTCLDMDIIFYNNVLDMYSKCGDLSSATQVFGKMGQ 368
Query: 1347 KDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWRF 1168
+ +VSWT MIAGY G EA+ F +M + G+ PD + SIL+AC+ +G L +G
Sbjct: 369 RSVVSWTSMIAGYVREGLSDEAIELFSEMERNGVSPDVYTITSILHACACNGSLKKGRDI 428
Query: 1167 FNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
+R + ++ L ++D+ A+ G + A+ MP++ D W ++ G
Sbjct: 429 HKYIR-EHGMDSGLFVCNTLMDMYAKCGSMEDAHSVFSNMPVK-DIVSWNTMIGG 481
Score = 120 bits (301), Expect = 4e-24
Identities = 72/257 (28%), Positives = 131/257 (50%), Gaps = 1/257 (0%)
Frame = -2
Query: 1707 MYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQP-NKRPDDVT 1531
M+ KCG + A ++F ++ I WN MI Y+K E + LF MQ + + + T
Sbjct: 147 MFVKCGDLREARLIFDKLSNGKIFLWNLMINEYAKVRNFREGIHLFRKMQELDIQANSYT 206
Query: 1530 ITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIF 1351
+C+L +SL + G +HGY+ + G SD+ V N+L Y K + A+ +F ++
Sbjct: 207 FSCILKCFSSLGYVREGEWVHGYLYKLGFGSDNTVGNSLMAFYFKNRRIESARKVFDELS 266
Query: 1350 SKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWR 1171
+D++SW MI+ Y +G + V F++M GI+ D + I++L ACS G L G R
Sbjct: 267 DRDVISWNSMISAYVSNGLADKGVDIFRQMLSLGIDVDLATIINVLMACSDGGNLSLG-R 325
Query: 1170 FFNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCGCRIY 991
+ + ++ ++ Y ++D+ ++ G LS A + +M + W +++ G Y
Sbjct: 326 ALHSYAIKTCLDMDIIFYNNVLDMYSKCGDLSSATQVFGKMG-QRSVVSWTSMIAG---Y 381
Query: 990 HDVDMAEKVAEQVFELE 940
++++ E E+E
Sbjct: 382 VREGLSDEAIELFSEME 398
Score = 68.6 bits (166), Expect = 2e-08
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 1/157 (0%)
Frame = -2
Query: 1644 DIVSWNTMIGGYSKNSFANEALSLFATMQPNKRPDDVTITC-VLPACASLAALDRGREIH 1468
+++ N I Y + A+ L + ++ D+ C VL CA L +L G+ +H
Sbjct: 69 EVIDKNAKISKYCEMGNLKNAVELVCGSKKSEL--DLEGYCSVLELCAGLKSLQDGKRVH 126
Query: 1467 GYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIFSKDLVSWTIMIAGYAMHGFGT 1288
+ NG D + L M+VKCG L A+L+F K+ + + W +MI YA
Sbjct: 127 SVICSNGAEVDGPLGAKLVFMFVKCGDLREARLIFDKLSNGKIFLWNLMINEYAKVRNFR 186
Query: 1287 EAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEG 1177
E + F+KM++ I+ + +F IL S G + EG
Sbjct: 187 EGIHLFRKMQELDIQANSYTFSCILKCFSSLGYVREG 223
>gb|AHB18405.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
Length = 875
Score = 657 bits (1696), Expect = 0.0
Identities = 310/429 (72%), Positives = 366/429 (85%), Gaps = 1/429 (0%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNKRPDDVT 1531
DMYAKCGSME A VFS M KDI+SWNTM+GGYSKN NEAL FA M +PD T
Sbjct: 445 DMYAKCGSMEGANSVFSTMVVKDIISWNTMVGGYSKNCLPNEALKTFAAMLKELKPDSRT 504
Query: 1530 ITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIF 1351
+ C+LPACASL+AL+RG+EIHGY+LRNG SSD V NAL D+YVKCG L +A+LLF I
Sbjct: 505 MACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIP 564
Query: 1350 SKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWR 1171
SKDLVSWT+MIAGY MHG+G EA+ATF +MR AGIEPDEVSFISILYACSHSGLL++GWR
Sbjct: 565 SKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR 624
Query: 1170 FFNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCGCRIY 991
FF IM+N F+IEP LEHY CMVDLL+R G LSKAYKFI+ +PI PDA +WGALLCGCRIY
Sbjct: 625 FFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIY 684
Query: 990 HDVDMAEKVAEQVFELEPENTGYYVLLANIYAEAEKWEEVKMLQGKIGKRALRKNPVCSW 811
HD+++AEKVAE+VFELEPENTGYYVLLANIYAEAEK EEVK ++ KIGK+ LRKNP CSW
Sbjct: 685 HDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRKNPGCSW 744
Query: 810 IEVRGKVYIFVSG-DSAYPQAKSIKFLLQDLRKKMNEQGHSSKQKYALINEDEMEKQVAI 634
IE++G+V +FVSG +S++P +K I+ LL+ +R+KM E+G+ K KYALIN DEM+K++A+
Sbjct: 745 IEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMAL 804
Query: 633 CGHSEKLAMAFGVLSLPPGKTIRVTKNIQVCGDCHEMAKFISKMLGREILLRDSSRFHHF 454
CGHSEKLAMAFG+L+LPP KTIRVTKN++VCGDCHEMAKF+SK REI+LRDS+RFHHF
Sbjct: 805 CGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHF 864
Query: 453 KDGSCSCRG 427
KDG CSCRG
Sbjct: 865 KDGYCSCRG 873
Score = 147 bits (371), Expect = 3e-32
Identities = 81/238 (34%), Positives = 134/238 (56%), Gaps = 2/238 (0%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNK-RPDDV 1534
DMY+KCG ++ A VF +M +++VSW +MI GY+++ +++ A+ L M+ + D V
Sbjct: 344 DMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVV 403
Query: 1533 TITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKI 1354
IT +L ACA +LD G+++H Y+ N ++S+ FV NAL DMY KCG++ A +F +
Sbjct: 404 AITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTM 463
Query: 1353 FSKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGW 1174
KD++SW M+ GY+ + EA+ TF M + ++PD + IL AC+ L+ G
Sbjct: 464 VVKDIISWNTMVGGYSKNCLPNEALKTFAAMLKE-LKPDSRTMACILPACASLSALERGK 522
Query: 1173 RFFN-IMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
I+RN + + ++ + +VDL + G L A +P D W ++ G
Sbjct: 523 EIHGYILRNGYSSDRHVAN--ALVDLYVKCGVLGLARLLFDMIP-SKDLVSWTVMIAG 577
Score = 125 bits (314), Expect = 1e-25
Identities = 74/235 (31%), Positives = 119/235 (50%), Gaps = 1/235 (0%)
Frame = -2
Query: 1704 YAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNKRPDDV-TI 1528
Y K E+A +F ++ +D++SWN+MI GY N L ++ M D+ TI
Sbjct: 245 YFKGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATI 304
Query: 1527 TCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIFS 1348
VL CA+ L G+ +H +++ N L DMY KCG L A +F K+
Sbjct: 305 ISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGE 364
Query: 1347 KDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWRF 1168
+++VSWT MIAGY G+ A+ Q+M + G++ D V+ SIL+AC+ SG LD G
Sbjct: 365 RNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDV 424
Query: 1167 FNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
+ ++ ++ NL ++D+ A+ G + A M ++ D W ++ G
Sbjct: 425 HDYIKAN-NMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVK-DIISWNTMVGG 477
Score = 122 bits (307), Expect = 8e-25
Identities = 70/235 (29%), Positives = 120/235 (51%), Gaps = 1/235 (0%)
Frame = -2
Query: 1704 YAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATM-QPNKRPDDVTI 1528
YA CG ++ VF M K++ WN M+ Y+K E++ LF M + + T
Sbjct: 144 YATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEVNSYTF 203
Query: 1527 TCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIFS 1348
+CVL A+L +L G +HGY+L+ G S + VVN+L Y K A LF K+
Sbjct: 204 SCVLKCFAALGSLKEGECVHGYLLKLGFGSCNSVVNSLIAFYFKGKRPESASELFDKLCD 263
Query: 1347 KDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWRF 1168
+D++SW MI+GY +G + +++M GI+ D + IS+L C++SG L G +
Sbjct: 264 RDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLG-KA 322
Query: 1167 FNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
+ + + E + ++D+ ++ G L A + ++M E + W +++ G
Sbjct: 323 VHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMG-ERNVVSWTSMIAG 376
Score = 63.2 bits (152), Expect = 7e-07
Identities = 40/155 (25%), Positives = 70/155 (45%)
Frame = -2
Query: 1641 IVSWNTMIGGYSKNSFANEALSLFATMQPNKRPDDVTITCVLPACASLAALDRGREIHGY 1462
+ +N I + + A+ L Q ++ + T VL CA L +L G+++H
Sbjct: 66 VTDYNAKILHFCQLGDLENAMELVCMCQKSEL-ETKTYGSVLQLCAGLKSLTDGKKVHSI 124
Query: 1461 VLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIFSKDLVSWTIMIAGYAMHGFGTEA 1282
+ N + D + L Y CG L + +F + K++ W M++ YA G E+
Sbjct: 125 IKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKES 184
Query: 1281 VATFQKMRQAGIEPDEVSFISILYACSHSGLLDEG 1177
+ F+ M + GIE + +F +L + G L EG
Sbjct: 185 ICLFKIMVEKGIEVNSYTFSCVLKCFAALGSLKEG 219
>ref|XP_008366040.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Malus domestica]
Length = 877
Score = 657 bits (1695), Expect = 0.0
Identities = 312/428 (72%), Positives = 362/428 (84%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNKRPDDVT 1531
DMYAKCGSME+A VFS+MPAKDIVSWNTMIGGYSKN NEAL LF+ M +PD +T
Sbjct: 448 DMYAKCGSMEDAHSVFSRMPAKDIVSWNTMIGGYSKNCLPNEALKLFSEMMQKSKPDSMT 507
Query: 1530 ITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIF 1351
I VLPACASLAAL+RG+EIHG++LRNG S+ V NAL DMYVKCG LV+A+LLF I
Sbjct: 508 IASVLPACASLAALNRGQEIHGHILRNGYFSERHVANALVDMYVKCGVLVLARLLFDXIP 567
Query: 1350 SKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWR 1171
KDL+SWT++ AGY MHGFG EA+A F +MR+AGIEPD VSFISILYACSHSGL DE WR
Sbjct: 568 VKDLISWTVIXAGYGMHGFGREAIAAFNEMRKAGIEPDSVSFISILYACSHSGLXDEAWR 627
Query: 1170 FFNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCGCRIY 991
FF+ MRN + I P LEHY CMVDLL+R G L+KAYKFIK MPIEPDA +WG+LLCGCRI+
Sbjct: 628 FFDTMRNDYGIVPKLEHYACMVDLLSRTGNLTKAYKFIKTMPIEPDATIWGSLLCGCRIH 687
Query: 990 HDVDMAEKVAEQVFELEPENTGYYVLLANIYAEAEKWEEVKMLQGKIGKRALRKNPVCSW 811
HDV +AEKVAE VFELEPENTGYYVLLANIYAEAEKWEEVKML+ +I +R L+KNP CSW
Sbjct: 688 HDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKMLRERITRRGLKKNPGCSW 747
Query: 810 IEVRGKVYIFVSGDSAYPQAKSIKFLLQDLRKKMNEQGHSSKQKYALINEDEMEKQVAIC 631
IE++GKV IFV+GDS++PQA I+ LL+ LR KM E+G S K +YALIN DE EK+VA+C
Sbjct: 748 IEIKGKVKIFVAGDSSHPQAAKIESLLKRLRLKMKEEGQSPKMQYALINADEAEKEVALC 807
Query: 630 GHSEKLAMAFGVLSLPPGKTIRVTKNIQVCGDCHEMAKFISKMLGREILLRDSSRFHHFK 451
GHSEKLA+AFG+L+L PGKTIRVTKN++VCGDCHEMAKFIS+ REI+LRDS+RFHH K
Sbjct: 808 GHSEKLAIAFGILNLQPGKTIRVTKNLRVCGDCHEMAKFISRTSRREIVLRDSNRFHHMK 867
Query: 450 DGSCSCRG 427
DG+CSCRG
Sbjct: 868 DGNCSCRG 875
Score = 157 bits (397), Expect = 3e-35
Identities = 85/238 (35%), Positives = 138/238 (57%), Gaps = 2/238 (0%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNK-RPDDV 1534
DMY+KCG + +A VF +M + +VSW +MI G+ + ++EA+ LF+ M+ + PD
Sbjct: 347 DMYSKCGDLSSAIQVFKKMGERSVVSWTSMIAGHIREGLSDEAIGLFSEMERDGVNPDAY 406
Query: 1533 TITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKI 1354
TIT +L ACAS +L +GR+IH Y+ +G+ S +V N L DMY KCG++ A +F ++
Sbjct: 407 TITSILHACASSGSLKKGRDIHNYIKEHGMDSSLYVCNTLMDMYAKCGSMEDAHSVFSRM 466
Query: 1353 FSKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGW 1174
+KD+VSW MI GY+ + EA+ F +M Q +PD ++ S+L AC+ L+ G
Sbjct: 467 PAKDIVSWNTMIGGYSKNCLPNEALKLFSEMMQKS-KPDSMTIASVLPACASLAALNRGQ 525
Query: 1173 RFF-NIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
+I+RN + E ++ + +VD+ + G L A +P++ D W + G
Sbjct: 526 EIHGHILRNGYFSERHVAN--ALVDMYVKCGVLVLARLLFDXIPVK-DLISWTVIXAG 580
Score = 140 bits (352), Expect = 5e-30
Identities = 78/235 (33%), Positives = 123/235 (52%), Gaps = 1/235 (0%)
Frame = -2
Query: 1704 YAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNKRPDDV-TI 1528
Y K +E A VF ++ +D++SWN+MI Y N A + + +F M D+ TI
Sbjct: 248 YFKNRRIEXARKVFDELCDRDVISWNSMISAYVSNGLAEKGVEIFRQMVSLGIDVDLATI 307
Query: 1527 TCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIFS 1348
VL AC + L GR +H Y ++ D N + DMY KCG L A +F+K+
Sbjct: 308 INVLMACVAGGNLSLGRALHAYAIKASFDEDVMFCNNVLDMYSKCGDLSSAIQVFKKMGE 367
Query: 1347 KDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWRF 1168
+ +VSWT MIAG+ G EA+ F +M + G+ PD + SIL+AC+ SG L +G
Sbjct: 368 RSVVSWTSMIAGHIREGLSDEAIGLFSEMERDGVNPDAYTITSILHACASSGSLKKGRDI 427
Query: 1167 FNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
N ++ + ++ +L ++D+ A+ G + A+ RMP + D W ++ G
Sbjct: 428 HNYIK-EHGMDSSLYVCNTLMDMYAKCGSMEDAHSVFSRMPAK-DIVSWNTMIGG 480
Score = 118 bits (295), Expect = 2e-23
Identities = 70/236 (29%), Positives = 118/236 (50%), Gaps = 1/236 (0%)
Frame = -2
Query: 1707 MYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQP-NKRPDDVT 1531
MY KCG + A VF ++ + WN MI Y+K E + LF MQ + + T
Sbjct: 146 MYVKCGDLREARRVFDKLSNGKVFVWNLMINEYAKVRNFREGVYLFGKMQELGIQANSYT 205
Query: 1530 ITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIF 1351
+CVL ++L + G IHGY+ + G SD+ V N+L Y K + A+ +F ++
Sbjct: 206 FSCVLKCFSALGCVREGEWIHGYLYKLGFGSDNTVGNSLMAFYFKNRRIEXARKVFDELC 265
Query: 1350 SKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWR 1171
+D++SW MI+ Y +G + V F++M GI+ D + I++L AC G L G R
Sbjct: 266 DRDVISWNSMISAYVSNGLAEKGVEIFRQMVSLGIDVDLATIINVLMACVAGGNLSLG-R 324
Query: 1170 FFNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
+ + + ++ ++D+ ++ G LS A + K+M E W +++ G
Sbjct: 325 ALHAYAIKASFDEDVMFCNNVLDMYSKCGDLSSAIQVFKKMG-ERSVVSWTSMIAG 379
Score = 68.6 bits (166), Expect = 2e-08
Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 1/152 (0%)
Frame = -2
Query: 1629 NTMIGGYSKNSFANEALSLFATMQPNKRPDDVTITC-VLPACASLAALDRGREIHGYVLR 1453
N I Y + A+ + + Q ++ D+ C V+ CA + +L G+ +H +
Sbjct: 73 NAKINKYCEMGNLKSAMEMVSGAQKSEL--DLEAYCSVVELCAGMMSLQDGKXVHSVICD 130
Query: 1452 NGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIFSKDLVSWTIMIAGYAMHGFGTEAVAT 1273
NG+ +D + L MYVKCG L A+ +F K+ + + W +MI YA E V
Sbjct: 131 NGVEADGQLGAKLVFMYVKCGDLREARRVFDKLSNGKVFVWNLMINEYAKVRNFREGVYL 190
Query: 1272 FQKMRQAGIEPDEVSFISILYACSHSGLLDEG 1177
F KM++ GI+ + +F +L S G + EG
Sbjct: 191 FGKMQELGIQANSYTFSCVLKCFSALGCVREG 222
>ref|XP_013597041.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic [Brassica oleracea var. oleracea]
Length = 870
Score = 651 bits (1679), Expect = 0.0
Identities = 301/430 (70%), Positives = 368/430 (85%), Gaps = 2/430 (0%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNKR--PDD 1537
DMYAKCGSM AE+VFS+MP +DI+SWNT+IGGYSKN +ANEALSLF + KR PD+
Sbjct: 439 DMYAKCGSMGEAEIVFSEMPVRDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFVPDE 498
Query: 1536 VTITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRK 1357
T+ CVLPACASL+A D+GREIHGY++RNG D V N+L DMY KCGAL++A+LLF +
Sbjct: 499 RTVVCVLPACASLSAFDKGREIHGYIVRNGFFRDRHVANSLVDMYAKCGALLLARLLFNE 558
Query: 1356 IFSKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEG 1177
I SKDLVSWT+MIAGY MHGFG EA+A F + R+ GIEPDE+SF+S+LYACSHSGL+DEG
Sbjct: 559 IASKDLVSWTVMIAGYGMHGFGKEAIALFNQKRREGIEPDEISFVSVLYACSHSGLVDEG 618
Query: 1176 WRFFNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCGCR 997
WRFFNIMR++ IEP LEHY C+VD+LAR G LSKAY+FI+ MPI PDA +WGALLCGCR
Sbjct: 619 WRFFNIMRHECKIEPTLEHYACVVDMLARTGDLSKAYRFIENMPIPPDATIWGALLCGCR 678
Query: 996 IYHDVDMAEKVAEQVFELEPENTGYYVLLANIYAEAEKWEEVKMLQGKIGKRALRKNPVC 817
I+HDV +AEKVAE+VFELEPENTGYYVL+ANIYAEAEKWEEVK L+ +IG+R LRKNP C
Sbjct: 679 IHHDVKLAEKVAERVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGC 738
Query: 816 SWIEVRGKVYIFVSGDSAYPQAKSIKFLLQDLRKKMNEQGHSSKQKYALINEDEMEKQVA 637
SWIE++G+V IFV+GDS++P+ ++I+ LL+ +R +M E+G+S + KYALI+ +EMEK+ A
Sbjct: 739 SWIEIKGRVNIFVAGDSSHPETENIEALLRRVRARMREEGYSPQTKYALIDAEEMEKEEA 798
Query: 636 ICGHSEKLAMAFGVLSLPPGKTIRVTKNIQVCGDCHEMAKFISKMLGREILLRDSSRFHH 457
+CGHSEKLAM GVL+ GK IRVTKN++VCGDCHEMAKF+SK+ GREI+LRDS+RFHH
Sbjct: 799 LCGHSEKLAMGLGVLTSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTGREIVLRDSNRFHH 858
Query: 456 FKDGSCSCRG 427
FKDG CSCRG
Sbjct: 859 FKDGHCSCRG 868
Score = 144 bits (364), Expect = 2e-31
Identities = 77/240 (32%), Positives = 135/240 (56%), Gaps = 4/240 (1%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNK--RPDD 1537
DMY+KCG +++A+ VF +M + +VS+ +MI GY++ A EA+ LF+ M+ + PD
Sbjct: 337 DMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFSEMEEEEGISPDV 396
Query: 1536 VTITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRK 1357
T+T VL CA L+ G+ +H ++ N + D F+ NAL DMY KCG++ A+++F +
Sbjct: 397 YTVTAVLNCCARNRLLEEGKRVHEWIKENDMGFDIFLSNALMDMYAKCGSMGEAEIVFSE 456
Query: 1356 IFSKDLVSWTIMIAGYAMHGFGTEAVATFQ-KMRQAGIEPDEVSFISILYACSHSGLLDE 1180
+ +D++SW +I GY+ + + EA++ F + + PDE + + +L AC+ D+
Sbjct: 457 MPVRDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFVPDERTVVCVLPACASLSAFDK 516
Query: 1179 GWRFFN-IMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
G I+RN F + ++ + +VD+ A+ G L A + D W ++ G
Sbjct: 517 GREIHGYIVRNGFFRDRHVAN--SLVDMYAKCGALLLARLLFNEI-ASKDLVSWTVMIAG 573
Score = 132 bits (331), Expect = 1e-27
Identities = 81/238 (34%), Positives = 124/238 (52%), Gaps = 4/238 (1%)
Frame = -2
Query: 1704 YAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNKRPDDV-TI 1528
Y K G +++A VF +M +D++SWN+MI GY + L +F M + D+ T+
Sbjct: 237 YLKNGRVDSARKVFDEMTERDVISWNSMINGYLSTGLTEQGLYMFVEMLCSGIEFDLATV 296
Query: 1527 TCVLPACASLAAL-DRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIF 1351
V CA + L GR +HG L+ +S + N L DMY KCG L AK +FR++
Sbjct: 297 VSVFAGCADDSCLVSLGRAVHGIGLKACMSREDRFCNTLLDMYSKCGDLDSAKAVFREMS 356
Query: 1350 SKDLVSWTIMIAGYAMHGFGTEAVATFQKM-RQAGIEPDEVSFISILYACSHSGLLDEGW 1174
+ +VS+T MIAGYA G EAV F +M + GI PD + ++L C+ + LL+EG
Sbjct: 357 DRSVVSYTSMIAGYAREGLAGEAVKLFSEMEEEEGISPDVYTVTAVLNCCARNRLLEEGK 416
Query: 1173 RFFN-IMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
R I N + L + ++D+ A+ G + +A MP+ D W ++ G
Sbjct: 417 RVHEWIKENDMGFDIFLSN--ALMDMYAKCGSMGEAEIVFSEMPVR-DIISWNTIIGG 471
Score = 100 bits (249), Expect = 4e-18
Identities = 84/344 (24%), Positives = 148/344 (43%), Gaps = 40/344 (11%)
Frame = -2
Query: 1707 MYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNKRP-DDVT 1531
MY CG + A VF Q+ + + WN ++ +K + ++ LF M + D T
Sbjct: 135 MYTNCGDLREARRVFDQVEIEKALFWNILMNELAKAGDFSGSIELFEKMMGSGVVMDSYT 194
Query: 1530 ITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIF 1351
+CV + +SL ++D G ++HGYVL+ G V N+L Y+K G + A+ +F ++
Sbjct: 195 FSCVSKSFSSLRSVDGGEQLHGYVLKLGFGECSSVGNSLLAFYLKNGRVDSARKVFDEMT 254
Query: 1350 SKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLL----- 1186
+D++SW MI GY G + + F +M +GIE D + +S+ C+ L
Sbjct: 255 ERDVISWNSMINGYLSTGLTEQGLYMFVEMLCSGIEFDLATVVSVFAGCADDSCLVSLGR 314
Query: 1185 -----------DEGWRFFNIMRNQFH---------------IEPNLEHYTCMVDLLARAG 1084
RF N + + + + ++ YT M+ AR G
Sbjct: 315 AVHGIGLKACMSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG 374
Query: 1083 KLSKAYKFIKRMP----IEPDAAVWGALLCGCRIYHDVDMAEKVAEQVFELEPENTGYYV 916
+A K M I PD A+L C ++ ++V E + E + G+ +
Sbjct: 375 LAGEAVKLFSEMEEEEGISPDVYTVTAVLNCCARNRLLEEGKRVHEWIKE---NDMGFDI 431
Query: 915 LLAN----IYAEAEKWEEVKMLQGKIGKRALRKNPVCSWIEVRG 796
L+N +YA+ E +++ ++ R + SW + G
Sbjct: 432 FLSNALMDMYAKCGSMGEAEIVFSEMPVR-----DIISWNTIIG 470
>ref|XP_010518818.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic [Tarenaya hassleriana]
Length = 872
Score = 651 bits (1679), Expect = 0.0
Identities = 308/430 (71%), Positives = 363/430 (84%), Gaps = 2/430 (0%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATM--QPNKRPDD 1537
DMYAKCGSME A +VFS+MP KDIVSWNT+IGGYSKN FANEALSLF+ M + RPD+
Sbjct: 441 DMYAKCGSMEEARLVFSEMPVKDIVSWNTVIGGYSKNCFANEALSLFSAMLEECQSRPDE 500
Query: 1536 VTITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRK 1357
T+ CVLPACAS+AA D+GREIH Y++RN SD V N+L DMY KCGAL A+LLF
Sbjct: 501 RTMVCVLPACASVAAFDKGREIHSYIMRNRYFSDRHVANSLVDMYAKCGALKFARLLFDD 560
Query: 1356 IFSKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEG 1177
I SKDLVSWT+MIAGY MHGFG EA+ F +MR+AGIEPDE+SF+S+LYACSHSGLLDEG
Sbjct: 561 IVSKDLVSWTVMIAGYGMHGFGNEAIDMFNEMRKAGIEPDEISFVSVLYACSHSGLLDEG 620
Query: 1176 WRFFNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCGCR 997
WRFFNIMR++ IEP LEHY CMVDLLAR G LSKAY+FI++MPI PD+ +WGALLCGCR
Sbjct: 621 WRFFNIMRHECKIEPTLEHYACMVDLLARTGNLSKAYRFIEKMPIPPDSTIWGALLCGCR 680
Query: 996 IYHDVDMAEKVAEQVFELEPENTGYYVLLANIYAEAEKWEEVKMLQGKIGKRALRKNPVC 817
I+HDV +AEKVAE+VFELEPENTGYYVL+ANIYAEAEKWEEVK L+ +IG+R LRKNP C
Sbjct: 681 IHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRQRIGQRGLRKNPGC 740
Query: 816 SWIEVRGKVYIFVSGDSAYPQAKSIKFLLQDLRKKMNEQGHSSKQKYALINEDEMEKQVA 637
SWIE++GKV IFVSGDS++PQ + I+ LL+ LR +M E+G+S KYALI+ +EMEK+ A
Sbjct: 741 SWIEIKGKVNIFVSGDSSHPQTEKIEALLRRLRARMMEEGYSPLTKYALIDAEEMEKEAA 800
Query: 636 ICGHSEKLAMAFGVLSLPPGKTIRVTKNIQVCGDCHEMAKFISKMLGREILLRDSSRFHH 457
+CGHSEKLAMA G+LS GK IRVTKN++VCGDCHEMAKF+SK+ REI+LRD +RFHH
Sbjct: 801 LCGHSEKLAMALGILSSGHGKIIRVTKNLRVCGDCHEMAKFMSKITRREIVLRDLNRFHH 860
Query: 456 FKDGSCSCRG 427
F DG CSCRG
Sbjct: 861 FTDGHCSCRG 870
Score = 153 bits (386), Expect = 5e-34
Identities = 84/239 (35%), Positives = 135/239 (56%), Gaps = 3/239 (1%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNK-RPDDV 1534
DMY+KCG + +A+ VF QM + VS+ +MI GY++ A EA+ LF+ M+ PD
Sbjct: 340 DMYSKCGDLGSAKAVFEQMSDRSAVSYTSMIAGYAREGLAGEAVKLFSEMEKEGISPDVY 399
Query: 1533 TITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKI 1354
T+T VL CA L+ G ++H ++ N + D FV NAL DMY KCG++ A+L+F ++
Sbjct: 400 TVTAVLNCCARNGLLEEGGQVHDWIRENDMDFDLFVSNALMDMYAKCGSMEEARLVFSEM 459
Query: 1353 FSKDLVSWTIMIAGYAMHGFGTEAVATFQKM-RQAGIEPDEVSFISILYACSHSGLLDEG 1177
KD+VSW +I GY+ + F EA++ F M + PDE + + +L AC+ D+G
Sbjct: 460 PVKDIVSWNTVIGGYSKNCFANEALSLFSAMLEECQSRPDERTMVCVLPACASVAAFDKG 519
Query: 1176 WRFFN-IMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
+ IMRN++ + ++ + +VD+ A+ G L A + + D W ++ G
Sbjct: 520 REIHSYIMRNRYFSDRHVAN--SLVDMYAKCGALKFARLLFDDI-VSKDLVSWTVMIAG 575
Score = 140 bits (354), Expect = 3e-30
Identities = 78/235 (33%), Positives = 124/235 (52%), Gaps = 1/235 (0%)
Frame = -2
Query: 1704 YAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQ-PNKRPDDVTI 1528
Y K G +E+A +F +M +D++SWN+MI GY N A + L++F M D T+
Sbjct: 241 YLKNGRVESARRLFDEMTERDVISWNSMINGYISNGSAEQGLTIFVQMLLSGLNVDLATM 300
Query: 1527 TCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIFS 1348
V CA + GR +H + L+ + N L DMY KCG L AK +F ++
Sbjct: 301 VSVFSGCADCRFISLGRAVHCFGLKTRFACKDRFCNTLLDMYSKCGDLGSAKAVFEQMSD 360
Query: 1347 KDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWRF 1168
+ VS+T MIAGYA G EAV F +M + GI PD + ++L C+ +GLL+EG +
Sbjct: 361 RSAVSYTSMIAGYAREGLAGEAVKLFSEMEKEGISPDVYTVTAVLNCCARNGLLEEGGQV 420
Query: 1167 FNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
+ +R ++ +L ++D+ A+ G + +A MP++ D W ++ G
Sbjct: 421 HDWIREN-DMDFDLFVSNALMDMYAKCGSMEEARLVFSEMPVK-DIVSWNTVIGG 473
Score = 100 bits (248), Expect = 5e-18
Identities = 64/259 (24%), Positives = 121/259 (46%), Gaps = 1/259 (0%)
Frame = -2
Query: 1707 MYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATM-QPNKRPDDVT 1531
MY CG++ A VF + + WN +I Y K E++ LF M D T
Sbjct: 139 MYVNCGNLREARRVFDLTRIEKTLFWNLLINEYVKTGDFRESIGLFKKMLNSGIETDHYT 198
Query: 1530 ITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIF 1351
+ + + + L +++ G ++HGYVL+ G + + VVN+L Y+K G + A+ LF ++
Sbjct: 199 FSSISKSLSVLGSVNGGEQLHGYVLKTGFGNYNSVVNSLMASYLKNGRVESARRLFDEMT 258
Query: 1350 SKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWR 1171
+D++SW MI GY +G + + F +M +G+ D + +S+ C+ + G R
Sbjct: 259 ERDVISWNSMINGYISNGSAEQGLTIFVQMLLSGLNVDLATMVSVFSGCADCRFISLG-R 317
Query: 1170 FFNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCGCRIY 991
+ + ++D+ ++ G L A ++M + A + +++ G Y
Sbjct: 318 AVHCFGLKTRFACKDRFCNTLLDMYSKCGDLGSAKAVFEQMS-DRSAVSYTSMIAG---Y 373
Query: 990 HDVDMAEKVAEQVFELEPE 934
+A + + E+E E
Sbjct: 374 AREGLAGEAVKLFSEMEKE 392
Score = 71.6 bits (174), Expect = 2e-09
Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 4/213 (1%)
Frame = -2
Query: 1629 NTMIGGYSKNSFANEALSLFATMQPNKRPDDVTITCVLPACASLAALDRGREIHGYVLRN 1450
NT I + + A L T D T+ +L CA +L+ GRE+ ++ N
Sbjct: 66 NTQIRRFCEAGNLESATELLRTSS-KPEIDPRTLCSMLQLCADSKSLNHGREVDSFIRAN 124
Query: 1449 GLSSDHFVVNALTDMYVKCGALVMAKLLFRKIFSKDLVSWTIMIAGYAMHGFGTEAVATF 1270
G + D + + L MYV CG L A+ +F + + W ++I Y G E++ F
Sbjct: 125 GFAIDANLGSKLVLMYVNCGNLREARRVFDLTRIEKTLFWNLLINEYVKTGDFRESIGLF 184
Query: 1269 QKMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNIMRNQFHIEPNLEHYTCMVDLL-- 1096
+KM +GIE D +F SI + S G ++ G + + + ++ +Y +V+ L
Sbjct: 185 KKMLNSGIETDHYTFSSISKSLSVLGSVNGGEQL-----HGYVLKTGFGNYNSVVNSLMA 239
Query: 1095 --ARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
+ G++ A + M E D W +++ G
Sbjct: 240 SYLKNGRVESARRLFDEM-TERDVISWNSMING 271
>ref|XP_009352737.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic [Pyrus x bretschneideri]
Length = 879
Score = 650 bits (1677), Expect = 0.0
Identities = 307/428 (71%), Positives = 360/428 (84%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNKRPDDVT 1531
DMYAKCGSME+A VFS+MPAKDIVSWNTMIGGYSKN NEAL LF+ M +PD +T
Sbjct: 450 DMYAKCGSMEDAHSVFSRMPAKDIVSWNTMIGGYSKNCLPNEALKLFSEMMQKSKPDSMT 509
Query: 1530 ITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIF 1351
I +LPACASLAAL+RG+EIHG++LRNG S+ V NAL DMYVKCG LV+A+LLF
Sbjct: 510 IASILPACASLAALNRGQEIHGHILRNGYFSERHVANALVDMYVKCGVLVLARLLFDMFP 569
Query: 1350 SKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWR 1171
KDL+SWT+++AGY MHGFG EA+A F +MR+AG EPD VSF+SILYACSHSGL DE WR
Sbjct: 570 VKDLISWTVIVAGYGMHGFGREAIAAFNEMRKAGTEPDGVSFVSILYACSHSGLRDEAWR 629
Query: 1170 FFNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCGCRIY 991
FF+ MRN + I P LEHY CMVDLL+R G L+KAYKFIK MPIEPDA +WG+LLCGCRI+
Sbjct: 630 FFDTMRNDYGIVPKLEHYACMVDLLSRTGNLTKAYKFIKTMPIEPDATIWGSLLCGCRIH 689
Query: 990 HDVDMAEKVAEQVFELEPENTGYYVLLANIYAEAEKWEEVKMLQGKIGKRALRKNPVCSW 811
HDV +AEKVAE VFELEPENTGYYVLLANIYAEAEKWEEVK L+ +I +R L+KNP CSW
Sbjct: 690 HDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERITRRGLKKNPGCSW 749
Query: 810 IEVRGKVYIFVSGDSAYPQAKSIKFLLQDLRKKMNEQGHSSKQKYALINEDEMEKQVAIC 631
IE++GKV IFV+GDS++PQA I+ LL+ LR KM E+G S K +YALIN DE EK+VA+C
Sbjct: 750 IEIKGKVKIFVAGDSSHPQAAKIESLLKRLRLKMKEEGQSPKMQYALINADEAEKEVALC 809
Query: 630 GHSEKLAMAFGVLSLPPGKTIRVTKNIQVCGDCHEMAKFISKMLGREILLRDSSRFHHFK 451
GHSEKLA+AFG+L+L PGKTIRVTKN++VCGDCHEMAKFIS+ REI+LRDS+RFHH K
Sbjct: 810 GHSEKLAIAFGMLNLQPGKTIRVTKNLRVCGDCHEMAKFISRTSRREIVLRDSNRFHHMK 869
Query: 450 DGSCSCRG 427
DG+CSCRG
Sbjct: 870 DGNCSCRG 877
Score = 158 bits (399), Expect = 2e-35
Identities = 86/238 (36%), Positives = 138/238 (57%), Gaps = 2/238 (0%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNK-RPDDV 1534
DMY+KCG + +A VF +M + +VSW +MI G+ + ++EA+ LF+ M+ + PD
Sbjct: 349 DMYSKCGDLSSAIQVFKKMGERSVVSWTSMIAGHIREGLSDEAIGLFSEMERDGVNPDAY 408
Query: 1533 TITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKI 1354
TIT +L ACAS +L +GR+IH Y+ +G+ S +V N L DMY KCG++ A +F ++
Sbjct: 409 TITSILHACASSGSLKKGRDIHNYIKEHGMDSSLYVCNTLMDMYAKCGSMEDAHSVFSRM 468
Query: 1353 FSKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGW 1174
+KD+VSW MI GY+ + EA+ F +M Q +PD ++ SIL AC+ L+ G
Sbjct: 469 PAKDIVSWNTMIGGYSKNCLPNEALKLFSEMMQKS-KPDSMTIASILPACASLAALNRGQ 527
Query: 1173 RFF-NIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
+I+RN + E ++ + +VD+ + G L A P++ D W ++ G
Sbjct: 528 EIHGHILRNGYFSERHVAN--ALVDMYVKCGVLVLARLLFDMFPVK-DLISWTVIVAG 582
Score = 139 bits (350), Expect = 8e-30
Identities = 78/235 (33%), Positives = 124/235 (52%), Gaps = 1/235 (0%)
Frame = -2
Query: 1704 YAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNKRPDDV-TI 1528
Y K +E+A VF ++ +D++SWN+MI Y N A + + +F M D+ TI
Sbjct: 250 YFKNRRIESACKVFDELCDRDVISWNSMISAYVSNGLAEKGVEIFRQMVSLGIDVDLATI 309
Query: 1527 TCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIFS 1348
VL AC + L GR +H Y ++ D N + DMY KCG L A +F+K+
Sbjct: 310 INVLMACVAGGNLSLGRALHAYAIKASFDEDVMFCNNVLDMYSKCGDLSSAIQVFKKMGE 369
Query: 1347 KDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWRF 1168
+ +VSWT MIAG+ G EA+ F +M + G+ PD + SIL+AC+ SG L +G
Sbjct: 370 RSVVSWTSMIAGHIREGLSDEAIGLFSEMERDGVNPDAYTITSILHACASSGSLKKGRDI 429
Query: 1167 FNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
N ++ + ++ +L ++D+ A+ G + A+ RMP + D W ++ G
Sbjct: 430 HNYIK-EHGMDSSLYVCNTLMDMYAKCGSMEDAHSVFSRMPAK-DIVSWNTMIGG 482
Score = 116 bits (290), Expect = 7e-23
Identities = 70/236 (29%), Positives = 117/236 (49%), Gaps = 1/236 (0%)
Frame = -2
Query: 1707 MYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQP-NKRPDDVT 1531
MY KCG + A VF ++ + WN MI Y+K E + LF MQ + + T
Sbjct: 148 MYVKCGDLREARRVFDKLSNGKVFVWNLMINEYAKVRNFREGVYLFGKMQELGIQANSYT 207
Query: 1530 ITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIF 1351
+CVL ++L + G IHGY+ + G SD+ V N+L Y K + A +F ++
Sbjct: 208 FSCVLKCFSALGCVREGEWIHGYLYKLGFGSDNTVGNSLMAFYFKNRRIESACKVFDELC 267
Query: 1350 SKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWR 1171
+D++SW MI+ Y +G + V F++M GI+ D + I++L AC G L G R
Sbjct: 268 DRDVISWNSMISAYVSNGLAEKGVEIFRQMVSLGIDVDLATIINVLMACVAGGNLSLG-R 326
Query: 1170 FFNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
+ + + ++ ++D+ ++ G LS A + K+M E W +++ G
Sbjct: 327 ALHAYAIKASFDEDVMFCNNVLDMYSKCGDLSSAIQVFKKMG-ERSVVSWTSMIAG 381
Score = 67.8 bits (164), Expect = 3e-08
Identities = 38/115 (33%), Positives = 61/115 (53%)
Frame = -2
Query: 1521 VLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIFSKD 1342
V+ CA + +L G+++H + NG+ +D + L MYVKCG L A+ +F K+ +
Sbjct: 110 VVELCAGMMSLQDGKKVHSVICDNGVEADGQLGAKLVFMYVKCGDLREARRVFDKLSNGK 169
Query: 1341 LVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEG 1177
+ W +MI YA E V F KM++ GI+ + +F +L S G + EG
Sbjct: 170 VFVWNLMINEYAKVRNFREGVYLFGKMQELGIQANSYTFSCVLKCFSALGCVREG 224
>ref|XP_009132154.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic [Brassica rapa]
Length = 868
Score = 649 bits (1675), Expect = 0.0
Identities = 299/430 (69%), Positives = 369/430 (85%), Gaps = 2/430 (0%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNKR--PDD 1537
DMYAKCGSM AE+VFS+MP +DI+SWNT+IGGYSKN +ANEALSLF + KR PD+
Sbjct: 437 DMYAKCGSMGEAEIVFSEMPVRDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFVPDE 496
Query: 1536 VTITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRK 1357
T+ CVLPACASL+A D+GREIHGY++RNG D V N+L DMY KCGAL++A+LLF +
Sbjct: 497 RTVVCVLPACASLSAFDKGREIHGYIMRNGFFRDRHVANSLVDMYAKCGALLLARLLFDE 556
Query: 1356 IFSKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEG 1177
I SKDLVSWT+MIAGY MHGFG EA+A F + R+ GIEPDE+SF+S+LYACSHSGL+DEG
Sbjct: 557 IASKDLVSWTVMIAGYGMHGFGKEAIALFDQKRREGIEPDEISFVSVLYACSHSGLVDEG 616
Query: 1176 WRFFNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCGCR 997
WRFFNIMR++ IEP LEHY C+VD+LAR G+LSKAY+FI+ MPI PDA +WGALLCGCR
Sbjct: 617 WRFFNIMRHECKIEPTLEHYACVVDMLARTGELSKAYRFIESMPIPPDATIWGALLCGCR 676
Query: 996 IYHDVDMAEKVAEQVFELEPENTGYYVLLANIYAEAEKWEEVKMLQGKIGKRALRKNPVC 817
I+HDV +AE+VAE+VFELEPENTGYYVL+ANIYAEAEKWEEVK L+ +IG+R LRKNP C
Sbjct: 677 IHHDVKLAERVAERVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGC 736
Query: 816 SWIEVRGKVYIFVSGDSAYPQAKSIKFLLQDLRKKMNEQGHSSKQKYALINEDEMEKQVA 637
SWIE++G+V IFV+GDS++P+ ++I+ LL+ +R +M E+G+S + KYALI+ +EMEK+ A
Sbjct: 737 SWIEIKGRVNIFVAGDSSHPETENIEALLRRVRARMREEGYSPQTKYALIDAEEMEKEEA 796
Query: 636 ICGHSEKLAMAFGVLSLPPGKTIRVTKNIQVCGDCHEMAKFISKMLGREILLRDSSRFHH 457
+CGHSEKLAM G+L+ GK IRVTKN++VCGDCHEMAKF+SK+ GREI+LRDS+RFHH
Sbjct: 797 LCGHSEKLAMGLGILTSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTGREIVLRDSNRFHH 856
Query: 456 FKDGSCSCRG 427
FKDG CSCRG
Sbjct: 857 FKDGHCSCRG 866
Score = 144 bits (363), Expect = 2e-31
Identities = 78/239 (32%), Positives = 134/239 (56%), Gaps = 3/239 (1%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNK-RPDDV 1534
DMY+KC +++A+ VF++M + +VS+ +MI GY++ A EA+ LFA M+ PD
Sbjct: 336 DMYSKCSDLDSAKAVFTKMSDRSVVSYTSMIAGYAREGLAGEAVKLFAEMEEEGISPDVY 395
Query: 1533 TITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKI 1354
T+T VL CA L+ G+ +H ++ N + D F+ NAL DMY KCG++ A+++F ++
Sbjct: 396 TVTAVLNCCARNRLLEEGKRVHEWIKENDMGFDIFLSNALMDMYAKCGSMGEAEIVFSEM 455
Query: 1353 FSKDLVSWTIMIAGYAMHGFGTEAVATFQ-KMRQAGIEPDEVSFISILYACSHSGLLDEG 1177
+D++SW +I GY+ + + EA++ F + + PDE + + +L AC+ D+G
Sbjct: 456 PVRDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFVPDERTVVCVLPACASLSAFDKG 515
Query: 1176 WRFFN-IMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
IMRN F + ++ + +VD+ A+ G L A + D W ++ G
Sbjct: 516 REIHGYIMRNGFFRDRHVAN--SLVDMYAKCGALLLARLLFDEI-ASKDLVSWTVMIAG 571
Score = 138 bits (348), Expect = 1e-29
Identities = 81/236 (34%), Positives = 121/236 (51%), Gaps = 2/236 (0%)
Frame = -2
Query: 1704 YAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNKRPDDV-TI 1528
Y K G +E+A VF +M +D++SWN+MI GY + L LF M + D+ T+
Sbjct: 237 YLKNGRVESARKVFDEMTERDVISWNSMINGYVSTGLTEQGLYLFVEMLCSGIEFDLATV 296
Query: 1527 TCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIFS 1348
V CA + GR +HG L+ +S + N L DMY KC L AK +F K+
Sbjct: 297 VSVFAGCADSCLVSLGRAVHGIGLKACMSREDRFCNTLLDMYSKCSDLDSAKAVFTKMSD 356
Query: 1347 KDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGWRF 1168
+ +VS+T MIAGYA G EAV F +M + GI PD + ++L C+ + LL+EG R
Sbjct: 357 RSVVSYTSMIAGYAREGLAGEAVKLFAEMEEEGISPDVYTVTAVLNCCARNRLLEEGKRV 416
Query: 1167 FN-IMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
I N + L + ++D+ A+ G + +A MP+ D W ++ G
Sbjct: 417 HEWIKENDMGFDIFLSN--ALMDMYAKCGSMGEAEIVFSEMPVR-DIISWNTIIGG 469
Score = 106 bits (264), Expect = 7e-20
Identities = 87/342 (25%), Positives = 151/342 (44%), Gaps = 38/342 (11%)
Frame = -2
Query: 1707 MYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNK-RPDDVT 1531
MY CG + A VF Q+ + + WN ++ +K + ++ LF M + D T
Sbjct: 135 MYTNCGDLREARRVFDQVRIEKALFWNILMNELAKAGDFSGSIELFEKMMGSGVEMDSYT 194
Query: 1530 ITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIF 1351
+CV + +SL ++D G ++HGYVL+ G V N+L Y+K G + A+ +F ++
Sbjct: 195 FSCVSKSFSSLRSVDGGEQLHGYVLKLGFGECSSVGNSLLAFYLKNGRVESARKVFDEMT 254
Query: 1350 SKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGW- 1174
+D++SW MI GY G + + F +M +GIE D + +S+ C+ S L+ G
Sbjct: 255 ERDVISWNSMINGYVSTGLTEQGLYLFVEMLCSGIEFDLATVVSVFAGCADSCLVSLGRA 314
Query: 1173 --------------RFFNIMRNQFHIEPNLE---------------HYTCMVDLLARAGK 1081
RF N + + + +L+ YT M+ AR G
Sbjct: 315 VHGIGLKACMSREDRFCNTLLDMYSKCSDLDSAKAVFTKMSDRSVVSYTSMIAGYAREGL 374
Query: 1080 LSKAYKFIKRMP---IEPDAAVWGALLCGCRIYHDVDMAEKVAEQVFELEPENTGYYVLL 910
+A K M I PD A+L C ++ ++V E + E + G+ + L
Sbjct: 375 AGEAVKLFAEMEEEGISPDVYTVTAVLNCCARNRLLEEGKRVHEWIKE---NDMGFDIFL 431
Query: 909 AN----IYAEAEKWEEVKMLQGKIGKRALRKNPVCSWIEVRG 796
+N +YA+ E +++ ++ R + SW + G
Sbjct: 432 SNALMDMYAKCGSMGEAEIVFSEMPVR-----DIISWNTIIG 468
Score = 62.4 bits (150), Expect = 1e-06
Identities = 45/180 (25%), Positives = 83/180 (46%)
Frame = -2
Query: 1542 DDVTITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLF 1363
D T+ VL CA +L G+E+ ++ RNG+ D + + L MY CG L A+ +F
Sbjct: 90 DPRTLCSVLQLCADTRSLKHGKEVDSFIRRNGVVVDSNMGSKLALMYTNCGDLREARRVF 149
Query: 1362 RKIFSKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLD 1183
++ + + W I++ A G + ++ F+KM +G+E D +F + + S +D
Sbjct: 150 DQVRIEKALFWNILMNELAKAGDFSGSIELFEKMMGSGVEMDSYTFSCVSKSFSSLRSVD 209
Query: 1182 EGWRFFNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
G + + E + + + L + G++ A K M E D W +++ G
Sbjct: 210 GGEQLHGYVLKLGFGECSSVGNSLLAFYL-KNGRVESARKVFDEM-TERDVISWNSMING 267
>ref|XP_013700306.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic [Brassica napus]
gi|923912642|ref|XP_013726004.1| PREDICTED:
pentatricopeptide repeat-containing protein DOT4,
chloroplastic isoform X1 [Brassica napus]
gi|923912645|ref|XP_013726005.1| PREDICTED:
pentatricopeptide repeat-containing protein DOT4,
chloroplastic isoform X2 [Brassica napus]
Length = 869
Score = 649 bits (1674), Expect = 0.0
Identities = 299/430 (69%), Positives = 369/430 (85%), Gaps = 2/430 (0%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNKR--PDD 1537
DMYAKCGSM AE+VFS+MP +DI+SWNT+IGGYSKN +ANEALSLF + KR PD+
Sbjct: 438 DMYAKCGSMGEAELVFSEMPVRDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFVPDE 497
Query: 1536 VTITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRK 1357
T+ CVLPACASL+A D+GREIHGY++RNG D V N+L DMY KCGAL++A+LLF +
Sbjct: 498 RTVVCVLPACASLSAFDKGREIHGYIMRNGFFRDRHVANSLVDMYAKCGALLLARLLFDE 557
Query: 1356 IFSKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEG 1177
I SKDLVSWT+MIAGY MHGFG EA+A F + R+ GIEPDE+SF+S+LYACSHSGL+DEG
Sbjct: 558 IASKDLVSWTVMIAGYGMHGFGKEAIALFDQKRREGIEPDEISFVSVLYACSHSGLVDEG 617
Query: 1176 WRFFNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCGCR 997
WRFFNIMR++ +IEP LEHY C+VD+LAR G LSKAY+FI+ MPI PDA +WGALLCGCR
Sbjct: 618 WRFFNIMRHECNIEPTLEHYACVVDMLARTGDLSKAYRFIENMPIPPDATIWGALLCGCR 677
Query: 996 IYHDVDMAEKVAEQVFELEPENTGYYVLLANIYAEAEKWEEVKMLQGKIGKRALRKNPVC 817
I+HDV +AE+VAE+VFELEPENTGYYVL+ANIYAEAEKWEEVK L+ +IG+R LRKNP C
Sbjct: 678 IHHDVKLAERVAERVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGC 737
Query: 816 SWIEVRGKVYIFVSGDSAYPQAKSIKFLLQDLRKKMNEQGHSSKQKYALINEDEMEKQVA 637
SWIE++G+V IFV+GDS++P+ ++I+ LL+ +R +M E+G+S + KYALI+ +EMEK+ A
Sbjct: 738 SWIEIKGRVNIFVAGDSSHPETENIEALLRRVRARMREEGYSPQTKYALIDAEEMEKEEA 797
Query: 636 ICGHSEKLAMAFGVLSLPPGKTIRVTKNIQVCGDCHEMAKFISKMLGREILLRDSSRFHH 457
+CGHSEKLAM G+L+ GK IRVTKN++VCGDCHEMAKF+SK+ GREI+LRDS+RFHH
Sbjct: 798 LCGHSEKLAMGLGILTSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTGREIVLRDSNRFHH 857
Query: 456 FKDGSCSCRG 427
FKDG CSCRG
Sbjct: 858 FKDGHCSCRG 867
Score = 146 bits (369), Expect = 5e-32
Identities = 79/240 (32%), Positives = 135/240 (56%), Gaps = 4/240 (1%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNK--RPDD 1537
DMY+KCG +++A+ VF +M + +VS+ +MI GY++ A EA+ LF+ M+ + PD
Sbjct: 336 DMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFSEMEEEEGISPDV 395
Query: 1536 VTITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRK 1357
T+T VL CA L+ G+ +H ++ N + D F+ NAL DMY KCG++ A+L+F +
Sbjct: 396 YTVTAVLNCCARNRLLEEGKRVHEWIKENDMGFDIFLSNALMDMYAKCGSMGEAELVFSE 455
Query: 1356 IFSKDLVSWTIMIAGYAMHGFGTEAVATFQ-KMRQAGIEPDEVSFISILYACSHSGLLDE 1180
+ +D++SW +I GY+ + + EA++ F + + PDE + + +L AC+ D+
Sbjct: 456 MPVRDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFVPDERTVVCVLPACASLSAFDK 515
Query: 1179 GWRFFN-IMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
G IMRN F + ++ + +VD+ A+ G L A + D W ++ G
Sbjct: 516 GREIHGYIMRNGFFRDRHVAN--SLVDMYAKCGALLLARLLFDEI-ASKDLVSWTVMIAG 572
Score = 139 bits (349), Expect = 1e-29
Identities = 82/237 (34%), Positives = 124/237 (52%), Gaps = 3/237 (1%)
Frame = -2
Query: 1704 YAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNKRPDDV-TI 1528
Y K G +E+A VF +M +D++SWN+MI GY + LSLF M + D+ T+
Sbjct: 237 YLKNGRVESARKVFDEMTERDVISWNSMINGYVSTGLTEQGLSLFVEMLCSGIEFDLATV 296
Query: 1527 TCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIFS 1348
V CA + GR +HG ++ +S + N L DMY KCG L AK +FR++
Sbjct: 297 VSVFAGCADSCLVSLGRAVHGIGVKACMSREDRFCNTLLDMYSKCGDLDSAKAVFREMSD 356
Query: 1347 KDLVSWTIMIAGYAMHGFGTEAVATFQKM-RQAGIEPDEVSFISILYACSHSGLLDEGWR 1171
+ +VS+T MIAGYA G EAV F +M + GI PD + ++L C+ + LL+EG R
Sbjct: 357 RSVVSYTSMIAGYAREGLAGEAVKLFSEMEEEEGISPDVYTVTAVLNCCARNRLLEEGKR 416
Query: 1170 FFN-IMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
I N + L + ++D+ A+ G + +A MP+ D W ++ G
Sbjct: 417 VHEWIKENDMGFDIFLSN--ALMDMYAKCGSMGEAELVFSEMPVR-DIISWNTIIGG 470
Score = 107 bits (267), Expect = 3e-20
Identities = 86/343 (25%), Positives = 152/343 (44%), Gaps = 39/343 (11%)
Frame = -2
Query: 1707 MYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNK-RPDDVT 1531
MY CG + A VF Q+ + + WN ++ +K + ++ LF M + D T
Sbjct: 135 MYTNCGDLREARRVFDQVRIEKALFWNILMNELAKAGDFSGSIELFEKMMGSGVEMDSYT 194
Query: 1530 ITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIF 1351
+CV + +SL ++D G ++HGYVL+ G V N+L Y+K G + A+ +F ++
Sbjct: 195 FSCVSKSFSSLRSVDGGEQLHGYVLKLGFGECSSVGNSLLAFYLKNGRVESARKVFDEMT 254
Query: 1350 SKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGW- 1174
+D++SW MI GY G + ++ F +M +GIE D + +S+ C+ S L+ G
Sbjct: 255 ERDVISWNSMINGYVSTGLTEQGLSLFVEMLCSGIEFDLATVVSVFAGCADSCLVSLGRA 314
Query: 1173 --------------RFFNIMRNQFH---------------IEPNLEHYTCMVDLLARAGK 1081
RF N + + + + ++ YT M+ AR G
Sbjct: 315 VHGIGVKACMSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGL 374
Query: 1080 LSKAYKFIKRMP----IEPDAAVWGALLCGCRIYHDVDMAEKVAEQVFELEPENTGYYVL 913
+A K M I PD A+L C ++ ++V E + E + G+ +
Sbjct: 375 AGEAVKLFSEMEEEEGISPDVYTVTAVLNCCARNRLLEEGKRVHEWIKE---NDMGFDIF 431
Query: 912 LAN----IYAEAEKWEEVKMLQGKIGKRALRKNPVCSWIEVRG 796
L+N +YA+ E +++ ++ R + SW + G
Sbjct: 432 LSNALMDMYAKCGSMGEAELVFSEMPVR-----DIISWNTIIG 469
Score = 62.4 bits (150), Expect = 1e-06
Identities = 45/180 (25%), Positives = 83/180 (46%)
Frame = -2
Query: 1542 DDVTITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLF 1363
D T+ VL CA +L G+E+ ++ RNG+ D + + L MY CG L A+ +F
Sbjct: 90 DPRTLCSVLQLCADTRSLKHGKEVDSFIRRNGVVVDSNMGSKLALMYTNCGDLREARRVF 149
Query: 1362 RKIFSKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLD 1183
++ + + W I++ A G + ++ F+KM +G+E D +F + + S +D
Sbjct: 150 DQVRIEKALFWNILMNELAKAGDFSGSIELFEKMMGSGVEMDSYTFSCVSKSFSSLRSVD 209
Query: 1182 EGWRFFNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
G + + E + + + L + G++ A K M E D W +++ G
Sbjct: 210 GGEQLHGYVLKLGFGECSSVGNSLLAFYL-KNGRVESARKVFDEM-TERDVISWNSMING 267
>emb|CDX78889.1| BnaA01g09560D [Brassica napus]
Length = 869
Score = 649 bits (1674), Expect = 0.0
Identities = 298/430 (69%), Positives = 370/430 (86%), Gaps = 2/430 (0%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNKR--PDD 1537
DMYAKCGSM+ AE+VF++MP +DI+SWNT+IGGYSKN +ANEALSLF + KR PD+
Sbjct: 438 DMYAKCGSMQEAELVFTEMPVRDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFVPDE 497
Query: 1536 VTITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRK 1357
T+ CVLPACASL+A D+GREIHGY++RNG D V N+L DMY KCGAL++A+LLF +
Sbjct: 498 RTVVCVLPACASLSAFDKGREIHGYIMRNGFFRDRHVANSLVDMYAKCGALLLARLLFDE 557
Query: 1356 IFSKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEG 1177
I SKDLVSWT+MIAGY MHGFG EA+A F + R+ GIEPDE+SF+S+LYACSHSGL+DEG
Sbjct: 558 IASKDLVSWTVMIAGYGMHGFGKEAIALFDQKRREGIEPDEISFVSVLYACSHSGLVDEG 617
Query: 1176 WRFFNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCGCR 997
WRFFNIMR++ +IEP LEHY C+VD+LAR G LSKAY+FI+ MPI PDA +WGALLCGCR
Sbjct: 618 WRFFNIMRHECNIEPTLEHYACVVDMLARTGDLSKAYRFIESMPIPPDATIWGALLCGCR 677
Query: 996 IYHDVDMAEKVAEQVFELEPENTGYYVLLANIYAEAEKWEEVKMLQGKIGKRALRKNPVC 817
I+HDV +AE+VAE+VFELEPENTGYYVL+ANIYAEAEKWEEVK L+ +IG+R LRKNP C
Sbjct: 678 IHHDVKLAERVAERVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGC 737
Query: 816 SWIEVRGKVYIFVSGDSAYPQAKSIKFLLQDLRKKMNEQGHSSKQKYALINEDEMEKQVA 637
SWIE++G+V IFV+GDS++P+ ++I+ LL+ +R +M E+G+S + KYALI+ +EMEK+ A
Sbjct: 738 SWIEIKGRVNIFVAGDSSHPETENIEALLRRVRARMREEGYSPQTKYALIDAEEMEKEEA 797
Query: 636 ICGHSEKLAMAFGVLSLPPGKTIRVTKNIQVCGDCHEMAKFISKMLGREILLRDSSRFHH 457
+CGHSEKLAM G+L+ GK IRVTKN++VCGDCHEMAKF+SK+ GREI+LRDS+RFHH
Sbjct: 798 LCGHSEKLAMGLGILTSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTGREIVLRDSNRFHH 857
Query: 456 FKDGSCSCRG 427
FKDG CSCRG
Sbjct: 858 FKDGHCSCRG 867
Score = 147 bits (370), Expect = 4e-32
Identities = 79/240 (32%), Positives = 135/240 (56%), Gaps = 4/240 (1%)
Frame = -2
Query: 1710 DMYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNK--RPDD 1537
DMY+KCG +++A+ VF +M + +VS+ +MI GY++ A EA+ LF+ M+ + PD
Sbjct: 336 DMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFSEMEEEEGISPDV 395
Query: 1536 VTITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRK 1357
T+T VL CA L+ G+ +H ++ N + D F+ NAL DMY KCG++ A+L+F +
Sbjct: 396 YTVTAVLNCCARNRLLEEGKRVHEWIKENDMGFDIFLSNALMDMYAKCGSMQEAELVFTE 455
Query: 1356 IFSKDLVSWTIMIAGYAMHGFGTEAVATFQ-KMRQAGIEPDEVSFISILYACSHSGLLDE 1180
+ +D++SW +I GY+ + + EA++ F + + PDE + + +L AC+ D+
Sbjct: 456 MPVRDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFVPDERTVVCVLPACASLSAFDK 515
Query: 1179 GWRFFN-IMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
G IMRN F + ++ + +VD+ A+ G L A + D W ++ G
Sbjct: 516 GREIHGYIMRNGFFRDRHVAN--SLVDMYAKCGALLLARLLFDEI-ASKDLVSWTVMIAG 572
Score = 139 bits (350), Expect = 8e-30
Identities = 83/237 (35%), Positives = 124/237 (52%), Gaps = 3/237 (1%)
Frame = -2
Query: 1704 YAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNKRPDDV-TI 1528
Y K G +E+A VF +M +D++SWN+MI GY + LSLF M + D+ T+
Sbjct: 237 YLKNGRVESARKVFDEMTERDVISWNSMINGYVSTGLTEQGLSLFVEMLCSGIEFDLATV 296
Query: 1527 TCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIFS 1348
V CA + GR +HG L+ +S + N L DMY KCG L AK +FR++
Sbjct: 297 VSVFAGCADSCFVSLGRAVHGIGLKACMSREDRFCNTLLDMYSKCGDLDSAKAVFREMSD 356
Query: 1347 KDLVSWTIMIAGYAMHGFGTEAVATFQKM-RQAGIEPDEVSFISILYACSHSGLLDEGWR 1171
+ +VS+T MIAGYA G EAV F +M + GI PD + ++L C+ + LL+EG R
Sbjct: 357 RSVVSYTSMIAGYAREGLAGEAVKLFSEMEEEEGISPDVYTVTAVLNCCARNRLLEEGKR 416
Query: 1170 FFN-IMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
I N + L + ++D+ A+ G + +A MP+ D W ++ G
Sbjct: 417 VHEWIKENDMGFDIFLSN--ALMDMYAKCGSMQEAELVFTEMPVR-DIISWNTIIGG 470
Score = 106 bits (265), Expect = 6e-20
Identities = 81/321 (25%), Positives = 144/321 (44%), Gaps = 39/321 (12%)
Frame = -2
Query: 1707 MYAKCGSMENAEVVFSQMPAKDIVSWNTMIGGYSKNSFANEALSLFATMQPNK-RPDDVT 1531
MY CG + A VF Q+ + + WN ++ +K + ++ LF M + D T
Sbjct: 135 MYTNCGDLREARRVFDQVRIEKALFWNILMNELAKAGDFSGSIELFEKMMSSGVSMDSYT 194
Query: 1530 ITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLFRKIF 1351
+CV + +SL ++D G ++HGYVL+ G V N+L Y+K G + A+ +F ++
Sbjct: 195 FSCVSKSFSSLRSVDGGEQLHGYVLKLGFGECSSVGNSLLAFYLKNGRVESARKVFDEMT 254
Query: 1350 SKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLDEGW- 1174
+D++SW MI GY G + ++ F +M +GIE D + +S+ C+ S + G
Sbjct: 255 ERDVISWNSMINGYVSTGLTEQGLSLFVEMLCSGIEFDLATVVSVFAGCADSCFVSLGRA 314
Query: 1173 --------------RFFNIMRNQFH---------------IEPNLEHYTCMVDLLARAGK 1081
RF N + + + + ++ YT M+ AR G
Sbjct: 315 VHGIGLKACMSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGL 374
Query: 1080 LSKAYKFIKRMP----IEPDAAVWGALLCGCRIYHDVDMAEKVAEQVFELEPENTGYYVL 913
+A K M I PD A+L C ++ ++V E + E + G+ +
Sbjct: 375 AGEAVKLFSEMEEEEGISPDVYTVTAVLNCCARNRLLEEGKRVHEWIKE---NDMGFDIF 431
Query: 912 LAN----IYAEAEKWEEVKML 862
L+N +YA+ +E +++
Sbjct: 432 LSNALMDMYAKCGSMQEAELV 452
Score = 60.5 bits (145), Expect = 5e-06
Identities = 44/180 (24%), Positives = 81/180 (45%)
Frame = -2
Query: 1542 DDVTITCVLPACASLAALDRGREIHGYVLRNGLSSDHFVVNALTDMYVKCGALVMAKLLF 1363
D T+ VL CA +L G+E+ ++ RNG D + + L MY CG L A+ +F
Sbjct: 90 DPRTLCSVLQLCADTRSLKHGKEVASFIRRNGFVVDSNMGSKLALMYTNCGDLREARRVF 149
Query: 1362 RKIFSKDLVSWTIMIAGYAMHGFGTEAVATFQKMRQAGIEPDEVSFISILYACSHSGLLD 1183
++ + + W I++ A G + ++ F+KM +G+ D +F + + S +D
Sbjct: 150 DQVRIEKALFWNILMNELAKAGDFSGSIELFEKMMSSGVSMDSYTFSCVSKSFSSLRSVD 209
Query: 1182 EGWRFFNIMRNQFHIEPNLEHYTCMVDLLARAGKLSKAYKFIKRMPIEPDAAVWGALLCG 1003
G + + E + + + L + G++ A K M E D W +++ G
Sbjct: 210 GGEQLHGYVLKLGFGECSSVGNSLLAFYL-KNGRVESARKVFDEM-TERDVISWNSMING 267