BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00012545
         (3367 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP13507.1| unnamed protein product [Coffea canephora]           1769   0.0  
ref|XP_011081567.1| PREDICTED: RNA-dependent RNA polymerase 6 [S...  1535   0.0  
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]  1515   0.0  
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]    1511   0.0  
ref|XP_009758053.1| PREDICTED: RNA-dependent RNA polymerase 6 [N...  1510   0.0  
gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot...  1506   0.0  
ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-li...  1506   0.0  
emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]   1501   0.0  
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    1501   0.0  
dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]   1500   0.0  
ref|XP_010319120.1| PREDICTED: RNA-dependent RNA polymerase 6 is...  1498   0.0  
ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lyco...  1498   0.0  
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...  1485   0.0  
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu...  1481   0.0  
ref|XP_012857917.1| PREDICTED: RNA-dependent RNA polymerase 6 [E...  1480   0.0  
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu...  1479   0.0  
ref|XP_012071453.1| PREDICTED: RNA-dependent RNA polymerase 6-li...  1477   0.0  
ref|XP_011026450.1| PREDICTED: RNA-dependent RNA polymerase 6-li...  1476   0.0  
ref|XP_012076580.1| PREDICTED: RNA-dependent RNA polymerase 6-li...  1469   0.0  
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...  1465   0.0  

>emb|CDP13507.1| unnamed protein product [Coffea canephora]
          Length = 1049

 Score = 1769 bits (4581), Expect = 0.0
 Identities = 869/978 (88%), Positives = 912/978 (93%)
 Frame = -3

Query: 3308 LASSPSIHYRTADDDIEVSVPFDLLDDDDPWIRTTDFTPSGAIGRCNMYRISIPPRKGAI 3129
            LASSP IHYRTADDDIE SVPFDLLDDDDPWIRTTDFTPSGAIGRCN+YRISIPPR G  
Sbjct: 72   LASSPRIHYRTADDDIEESVPFDLLDDDDPWIRTTDFTPSGAIGRCNIYRISIPPRNGGT 131

Query: 3128 LKKALEYLKESRVYIQDISSAKKLLIKDEPDFGMTLSDPFFCIQHKQGITFGVLFLVNAI 2949
            L++AL YLK+SRV++Q +S A KLLIKDEPDFGM  SDPFFCIQ+KQGITF VLFLVNA+
Sbjct: 132  LERALVYLKQSRVHVQYMSPANKLLIKDEPDFGMASSDPFFCIQYKQGITFKVLFLVNAV 191

Query: 2948 MHKGIINQHQMSDMFFDLLRLESEEVNLAALKHIYSYKRPLFDASRKLESVQQRLHNNPK 2769
            MHKGIINQHQMSD FFDLLRLESEEVNLAALKHIYSYK PLFDAS+KLESVQQ LH NPK
Sbjct: 192  MHKGIINQHQMSDRFFDLLRLESEEVNLAALKHIYSYKWPLFDASKKLESVQQWLHKNPK 251

Query: 2768 LTERPKQLEDIVEVRRLIITPSKAYCLPPEVELSNRVLRHYRDVADRFLRVTFMDEGMRT 2589
            LTERPKQL+DIVEVRR+IITPSKAYCLPPEVELSNRVLRHYRD+ADRFLRVTFMDEGM+T
Sbjct: 252  LTERPKQLDDIVEVRRVIITPSKAYCLPPEVELSNRVLRHYRDIADRFLRVTFMDEGMQT 311

Query: 2588 LNKNVLNSYAASIVRDVTSYSNPQRTTMFKRVKNILNKGFYICGRKYCFLAFSANQLRDC 2409
            LNKNVL+ YAA IV DVTS SN QRT+MFKRVK+IL+KGFYICGRKY FLAFSANQLRD 
Sbjct: 312  LNKNVLSYYAAPIVWDVTSNSNLQRTSMFKRVKDILSKGFYICGRKYSFLAFSANQLRDR 371

Query: 2408 SAWFFAEHKNVRVANIISWMGRFTNRNVAKCAARMGQCFSSTYATVEVPLSQVDLQLPDI 2229
            SAWFFAE+KNVRVANIISWMGRF +RNVAKCAARMGQCFSSTYATVEVP SQVD +LPDI
Sbjct: 372  SAWFFAENKNVRVANIISWMGRFADRNVAKCAARMGQCFSSTYATVEVPPSQVDSELPDI 431

Query: 2228 KRNNFVFSDGIGMMTSGLAAEVAARLRLTQNPPCAYQIRYAGCKGVIACWPSKTNGHRLY 2049
            KRN FVFSDGIGMMTS LAAEVA RLRLT+NPPCAYQIRYAGCKGV+ACWPSKTNGHRLY
Sbjct: 432  KRNTFVFSDGIGMMTSDLAAEVAERLRLTENPPCAYQIRYAGCKGVVACWPSKTNGHRLY 491

Query: 2048 LRPSMQKFESSHTILEICSWTRFQPGFLNRQIITLLSALDVRDNIFWEMQESMMLRLNLM 1869
            LR SM+KF+S+HTILEICSWTRFQPGFLNRQIITLLSAL V+DNIFW MQESM+ RLNLM
Sbjct: 492  LRESMRKFDSTHTILEICSWTRFQPGFLNRQIITLLSALGVQDNIFWRMQESMISRLNLM 551

Query: 1868 LEDTDVAFDVITASCAEQGNTAAIMLSAGFNPKTEPHLRGMLTSVRAAQLRDLRERARIF 1689
            LEDTDVAFDV+TASCAEQGNT AIMLSAGFNP+TEPHLRGMLTSVRAAQL DLRE+ARIF
Sbjct: 552  LEDTDVAFDVVTASCAEQGNTPAIMLSAGFNPETEPHLRGMLTSVRAAQLGDLREKARIF 611

Query: 1688 VPSGRWLMGCLDELAVLEQGQCFIQVSGPCLENCFSHHGSKFSETQKNLQVIKGLVAIAK 1509
            V SGRWLMGCLDELAVLEQGQCFIQVSGPCLENCF  HGSKFSET+KNLQVIKGLV IAK
Sbjct: 612  VASGRWLMGCLDELAVLEQGQCFIQVSGPCLENCFFRHGSKFSETKKNLQVIKGLVVIAK 671

Query: 1508 NPCLHPGDVRILEAVDAPELQHLSDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDSNLI 1329
            NPCLHPGDVRILEAVDAPEL+HL+DCLVFPQKGDRPH NEASGSDLDGDLYFVTWD NLI
Sbjct: 672  NPCLHPGDVRILEAVDAPELRHLTDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDGNLI 731

Query: 1328 PPSKTSWMPMDYAPVEAKSLPREVKHPDIIDFFSKNMVTESLGTICNAHVVHADLSEYGA 1149
            PPSK SWMPMDYA  EA+ LPREV H DIIDFFSKNMVTESLG ICNAHVVHADLSEYGA
Sbjct: 732  PPSKRSWMPMDYASAEARKLPREVNHLDIIDFFSKNMVTESLGAICNAHVVHADLSEYGA 791

Query: 1148 LDEKCIKLAEMAAIAVDFPKTGKIVTMPFEYKPKMYPDFMGKEDFQSYKSKKILGKLYRQ 969
            LDEKCIKLAE+AA AVDFPKTGKIV MP EYKPKMYPDFMGKEDFQSYKSKKILGKLYRQ
Sbjct: 792  LDEKCIKLAELAATAVDFPKTGKIVNMPSEYKPKMYPDFMGKEDFQSYKSKKILGKLYRQ 851

Query: 968  VKDAYDEGEAATSDLIFSLNKIPYDTDLEIPGSEQFIKHAWNSKCSYDGQLNGLLGQYRV 789
            VKDA DEGEAATSDL F  NKIPYDTDLEIPGSE FI+HAWN+KCSYDGQLNGLLGQY+V
Sbjct: 852  VKDACDEGEAATSDLTFPSNKIPYDTDLEIPGSEVFIEHAWNTKCSYDGQLNGLLGQYKV 911

Query: 788  TREEEVVTGHIWSMPKYSSKKLGDLKERLKHAYNNLRKEFRRVFEQIEPDFEFLADDEKN 609
             REEEVVTGHIWSMPKYSSKKLGDLKERLKHAYNNLRKEFRRVFEQ+EP+FE L DDEKN
Sbjct: 912  NREEEVVTGHIWSMPKYSSKKLGDLKERLKHAYNNLRKEFRRVFEQMEPNFELLTDDEKN 971

Query: 608  AIYEKKASAWYQVTYHPTWLQRSLELHHPDCVGETVMLSFAWIAVDYLAQIKIRRRGSWN 429
             +YEKKASAWYQVTYHPTWLQR LEL  PD V ETVMLSFAWIAVDYLAQIKIR RGSWN
Sbjct: 972  VMYEKKASAWYQVTYHPTWLQRLLELQLPDGVEETVMLSFAWIAVDYLAQIKIRCRGSWN 1031

Query: 428  LDSSKPIDSLGRYLADKI 375
            LDSSKPIDSLGRYL+DKI
Sbjct: 1032 LDSSKPIDSLGRYLSDKI 1049


>ref|XP_011081567.1| PREDICTED: RNA-dependent RNA polymerase 6 [Sesamum indicum]
          Length = 1205

 Score = 1535 bits (3975), Expect = 0.0
 Identities = 748/1000 (74%), Positives = 856/1000 (85%), Gaps = 3/1000 (0%)
 Frame = -3

Query: 3365 EINAIRQYQDSSGFVILLQLASSPSIHYRTADDDIEVSVPFDLLDDDDPWIRTTDFTPSG 3186
            EIN I QY+D S  ++LLQLASSP ++YRTADDDIE SVPFDLLDDDDPWIRTTDFTPSG
Sbjct: 206  EINEINQYRDFSSLIVLLQLASSPLVYYRTADDDIEESVPFDLLDDDDPWIRTTDFTPSG 265

Query: 3185 AIGRCNMYRISIPPRKGAILKKALEYLKESRVYIQDISSAKKLLIKDEPDFGMTLSDPFF 3006
            AIGRCN YRIS  PR G  L KALEYL++ RV + D S  + L ++DEPDFGM +SDPFF
Sbjct: 266  AIGRCNTYRISARPRNGPSLFKALEYLRKLRVPVLDESPGRTLRVQDEPDFGMPMSDPFF 325

Query: 3005 CIQHKQGITFGVLFLVNAIMHKGIINQHQMSDMFFDLLRLESEEVNLAALKHIYSYKRPL 2826
            C+Q+K+GI+F ++FLVNA+MHKGIINQHQMS+ FFDLLR + EE+N+ ALKH+ SYKRP+
Sbjct: 326  CLQYKEGISFKIMFLVNAVMHKGIINQHQMSEKFFDLLRSQPEELNIVALKHMCSYKRPV 385

Query: 2825 FDASRKLESVQQRLHNNPKLTERPKQLEDIVEVRRLIITPSKAYCLPPEVELSNRVLRHY 2646
            +DA + L+ VQ+ L NNPKL ERP++++D+VEVRRLIITPSKAYCLPPEVELSNRVLR+Y
Sbjct: 386  YDAIKALDFVQKWLLNNPKLLERPREMDDVVEVRRLIITPSKAYCLPPEVELSNRVLRNY 445

Query: 2645 RDVADRFLRVTFMDEGMRTLNKNVLNSYAASIVRDVTSYSNPQRTTMFKRVKNILNKGFY 2466
            +++ADRFLRVTFMDE M+TLNKNVL  YA+ IVRD+TS SNPQRT MFKRVK+IL  GFY
Sbjct: 446  KNIADRFLRVTFMDEAMQTLNKNVLMYYASPIVRDITSNSNPQRTNMFKRVKDILVNGFY 505

Query: 2465 ICGRKYCFLAFSANQLRDCSAWFFAEHKNVRVANIISWMGRFTNRNVAKCAARMGQCFSS 2286
            +CGRKY FLAFSANQLRD SAWFFAE KN  VANI SWMG+FT RNVAKCAARMGQCFSS
Sbjct: 506  LCGRKYTFLAFSANQLRDRSAWFFAEDKNTGVANIKSWMGKFTQRNVAKCAARMGQCFSS 565

Query: 2285 TYATVEVPLSQVDLQLPDIKRNNFVFSDGIGMMTSGLAAEVAARLRLTQNPPCAYQIRYA 2106
            TYAT+EVPL++V+ Q PD++RN +VFSDGIGM+++ LA EVA +L+L  NPPCAYQIRYA
Sbjct: 566  TYATIEVPLTKVNSQFPDVERNGYVFSDGIGMISADLAIEVAEKLQLGSNPPCAYQIRYA 625

Query: 2105 GCKGVIACWPSKTNGHRLYLRPSMQKFESSHTILEICSWTRFQPGFLNRQIITLLSALDV 1926
            G KGV+A WP+K +G RLYLR SM+KFES+H  LEICSWTRFQPGFLNRQI+TLLSAL+V
Sbjct: 626  GYKGVVARWPAKDDGVRLYLRRSMKKFESNHKTLEICSWTRFQPGFLNRQIVTLLSALEV 685

Query: 1925 RDNIFWEMQESMMLRLNLMLEDTDVAFDVITASCAEQGNTAAIMLSAGFNPKTEPHLRGM 1746
            +D+IFW MQE+M+ RL+ MLED+D AFDV+TASC +QGNTAA+MLSAGF P+TEPHLRGM
Sbjct: 686  QDDIFWRMQETMVSRLDWMLEDSDTAFDVLTASCTDQGNTAALMLSAGFRPQTEPHLRGM 745

Query: 1745 LTSVRAAQLRDLRER---ARIFVPSGRWLMGCLDELAVLEQGQCFIQVSGPCLENCFSHH 1575
            LTS+RAAQL DL ER   ARIFVP GRWLMGCLDEL  LE GQCFIQVS P +E+CF  H
Sbjct: 746  LTSIRAAQLGDLSERATIARIFVPLGRWLMGCLDELGKLEHGQCFIQVSNPSIEDCFVKH 805

Query: 1574 GSKFSETQKNLQVIKGLVAIAKNPCLHPGDVRILEAVDAPELQHLSDCLVFPQKGDRPHT 1395
            GS+FSET+K LQV+ GLVAIAKNPCLHPGDVRILEAVD PEL HL DCLVFPQKGDRPHT
Sbjct: 806  GSQFSETKKKLQVVTGLVAIAKNPCLHPGDVRILEAVDVPELHHLYDCLVFPQKGDRPHT 865

Query: 1394 NEASGSDLDGDLYFVTWDSNLIPPSKTSWMPMDYAPVEAKSLPREVKHPDIIDFFSKNMV 1215
            NEASGSDLDGDLYFVTWD NLIPPSK SW PM+YAP E K LPREVKH DIIDFF+KNMV
Sbjct: 866  NEASGSDLDGDLYFVTWDENLIPPSKRSWTPMEYAPGEVKQLPREVKHSDIIDFFTKNMV 925

Query: 1214 TESLGTICNAHVVHADLSEYGALDEKCIKLAEMAAIAVDFPKTGKIVTMPFEYKPKMYPD 1035
             ESLG ICNAHVVHADLSEYGALDEKCIKLAE+AA AVDFPKTGKIV MP E KPK YPD
Sbjct: 926  NESLGAICNAHVVHADLSEYGALDEKCIKLAELAATAVDFPKTGKIVNMPAELKPKTYPD 985

Query: 1034 FMGKEDFQSYKSKKILGKLYRQVKDAYDEGEAATSDLIFSLNKIPYDTDLEIPGSEQFIK 855
            FMGKE+FQSY S KILGKLYR++KDAYD    A+ +  F+ + I YD DLE+ GS  FI 
Sbjct: 986  FMGKEEFQSYNSSKILGKLYRKIKDAYDRDHEASREHTFASDDIIYDQDLEVTGSTGFIG 1045

Query: 854  HAWNSKCSYDGQLNGLLGQYRVTREEEVVTGHIWSMPKYSSKKLGDLKERLKHAYNNLRK 675
             AWN KCSYDGQL GLLGQY+V REEEVVTGHIWSMPKYSSKK G+LKERLKHAY+ LRK
Sbjct: 1046 DAWNCKCSYDGQLIGLLGQYKVNREEEVVTGHIWSMPKYSSKKQGELKERLKHAYSTLRK 1105

Query: 674  EFRRVFEQIEPDFEFLADDEKNAIYEKKASAWYQVTYHPTWLQRSLELHHPDCVGETVML 495
            EFR+VFE + P+F+ L DDEKN +YE+KASAWYQVTY  +W+++S ELH  D  G++VML
Sbjct: 1106 EFRKVFECMGPEFDQLWDDEKNIMYERKASAWYQVTYKDSWVKKSKELHAVDDAGKSVML 1165

Query: 494  SFAWIAVDYLAQIKIRRRGSWNLDSSKPIDSLGRYLADKI 375
            SFAWIA DYLA+IKI+RR   N  S+KPIDSLGRYLADKI
Sbjct: 1166 SFAWIAADYLARIKIKRRMMENSISTKPIDSLGRYLADKI 1205


>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
          Length = 1197

 Score = 1515 bits (3923), Expect = 0.0
 Identities = 741/997 (74%), Positives = 846/997 (84%)
 Frame = -3

Query: 3365 EINAIRQYQDSSGFVILLQLASSPSIHYRTADDDIEVSVPFDLLDDDDPWIRTTDFTPSG 3186
            EIN I++ +D    VILLQLASSP + YRTADDDIE SV FDLLDDDD WIRTTD T SG
Sbjct: 202  EINEIKKCKDFMSLVILLQLASSPLVFYRTADDDIEESVAFDLLDDDDQWIRTTDITGSG 261

Query: 3185 AIGRCNMYRISIPPRKGAILKKALEYLKESRVYIQDISSAKKLLIKDEPDFGMTLSDPFF 3006
            AIGRCN YRISI PR G   +KA+ Y    RV + ++ + K L ++DEPDFG+++SDPFF
Sbjct: 262  AIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCNRKMLRVRDEPDFGVSMSDPFF 321

Query: 3005 CIQHKQGITFGVLFLVNAIMHKGIINQHQMSDMFFDLLRLESEEVNLAALKHIYSYKRPL 2826
            C Q+ +GI+F VLFL NA++HKGI+NQHQM + FF LLR   EEVNLAALKH++SYK P+
Sbjct: 322  CFQN-EGISFKVLFLANAVLHKGIVNQHQMINEFFYLLRSHQEEVNLAALKHMFSYKWPV 380

Query: 2825 FDASRKLESVQQRLHNNPKLTERPKQLEDIVEVRRLIITPSKAYCLPPEVELSNRVLRHY 2646
             DA +KL  +Q+ L  NPKL ER  +L+DIVEVRRL+ITP+KAYCLPP VELSNRVLR+Y
Sbjct: 381  NDAIQKLAGIQKWLLKNPKLLERTGELDDIVEVRRLVITPTKAYCLPPTVELSNRVLRNY 440

Query: 2645 RDVADRFLRVTFMDEGMRTLNKNVLNSYAASIVRDVTSYSNPQRTTMFKRVKNILNKGFY 2466
            + VADRFLRVTFMDEGMR LN+NVL  YAA+IVR++TS SNPQRT +F+RVK+IL+KGF+
Sbjct: 441  KHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSNSNPQRTAIFQRVKSILSKGFH 500

Query: 2465 ICGRKYCFLAFSANQLRDCSAWFFAEHKNVRVANIISWMGRFTNRNVAKCAARMGQCFSS 2286
            +CGRKY FLAFSANQLRD SAWFFAE   +RV  IISWMGRF+NRNVAKCAARMGQCFSS
Sbjct: 501  LCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQCFSS 560

Query: 2285 TYATVEVPLSQVDLQLPDIKRNNFVFSDGIGMMTSGLAAEVAARLRLTQNPPCAYQIRYA 2106
            TYATVEVP S+V+ +LPDI+RN +VFSDGIGM+++ LA EVA +L L+ NPP AYQIRYA
Sbjct: 561  TYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAIEVAEKLHLSVNPPAAYQIRYA 620

Query: 2105 GCKGVIACWPSKTNGHRLYLRPSMQKFESSHTILEICSWTRFQPGFLNRQIITLLSALDV 1926
            GCKGV+ACWP+K +G RL LRPSM+KF+S+HTILEICSWTRFQPGFLNRQI+TLLS+LDV
Sbjct: 621  GCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSSLDV 680

Query: 1925 RDNIFWEMQESMMLRLNLMLEDTDVAFDVITASCAEQGNTAAIMLSAGFNPKTEPHLRGM 1746
            +D IFWEMQ+ M+  L+ ML D+DVAFDVITASCAE GNTAA+MLSAGF P++EPHLRGM
Sbjct: 681  KDGIFWEMQKEMIAGLDKMLVDSDVAFDVITASCAEAGNTAALMLSAGFKPQSEPHLRGM 740

Query: 1745 LTSVRAAQLRDLRERARIFVPSGRWLMGCLDELAVLEQGQCFIQVSGPCLENCFSHHGSK 1566
            L+S+RA+QL DLR +ARIFVPSGRWLMGCLDEL  LEQGQCFIQVS P LENCF  HGSK
Sbjct: 741  LSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFVKHGSK 800

Query: 1565 FSETQKNLQVIKGLVAIAKNPCLHPGDVRILEAVDAPELQHLSDCLVFPQKGDRPHTNEA 1386
            FS+ +KNLQV+KGLV IAKNPCLHPGDVRILEAVD P L HL DCLVFPQKGDRPH+NEA
Sbjct: 801  FSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPSLSHLYDCLVFPQKGDRPHSNEA 860

Query: 1385 SGSDLDGDLYFVTWDSNLIPPSKTSWMPMDYAPVEAKSLPREVKHPDIIDFFSKNMVTES 1206
            SGSDLDGDLYFVTWD N+IPPSK SW+PM+Y P E K L R+V H DIIDFFSKNMV ES
Sbjct: 861  SGSDLDGDLYFVTWDENIIPPSKKSWIPMNYEPAEVKQLGRQVNHMDIIDFFSKNMVQES 920

Query: 1205 LGTICNAHVVHADLSEYGALDEKCIKLAEMAAIAVDFPKTGKIVTMPFEYKPKMYPDFMG 1026
            LG ICNAHVVHADLSE+GALDEKC+KLAE+AA+AVDFPKTGK+VTMPF+ KPKMYPDFMG
Sbjct: 921  LGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMG 980

Query: 1025 KEDFQSYKSKKILGKLYRQVKDAYDEGEAATSDLIFSLNKIPYDTDLEIPGSEQFIKHAW 846
            KE+FQSYKSKKILGKLYRQVKD  D     ++ L      IPYDT LEI GS  FI  AW
Sbjct: 981  KEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPKDIPYDTTLEILGSTTFIDDAW 1040

Query: 845  NSKCSYDGQLNGLLGQYRVTREEEVVTGHIWSMPKYSSKKLGDLKERLKHAYNNLRKEFR 666
            NSKCSYDGQLNGLLGQY+V REEEVVTGHIWSMPKYS+KK G+LKERLKHAYN LRKEFR
Sbjct: 1041 NSKCSYDGQLNGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNTLRKEFR 1100

Query: 665  RVFEQIEPDFEFLADDEKNAIYEKKASAWYQVTYHPTWLQRSLELHHPDCVGETVMLSFA 486
             VFE++EPDF+ L DDEKN +YE+KASAWYQVTYHP W+ RSLEL  PD V  TVMLSFA
Sbjct: 1101 NVFERMEPDFDLLPDDEKNDMYERKASAWYQVTYHPHWVARSLELQIPDAVSSTVMLSFA 1160

Query: 485  WIAVDYLAQIKIRRRGSWNLDSSKPIDSLGRYLADKI 375
            WIA DYLA+IKIR RG    DS+KPI+SLGRYLADKI
Sbjct: 1161 WIAADYLARIKIRHRGLPYSDSTKPINSLGRYLADKI 1197


>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
          Length = 1197

 Score = 1511 bits (3911), Expect = 0.0
 Identities = 736/997 (73%), Positives = 848/997 (85%)
 Frame = -3

Query: 3365 EINAIRQYQDSSGFVILLQLASSPSIHYRTADDDIEVSVPFDLLDDDDPWIRTTDFTPSG 3186
            EIN I++ +D +  VILLQLASSP + YRTADDDIE SV FDLLDDDD WIRTTD T SG
Sbjct: 202  EINEIKKCKDFTSLVILLQLASSPLVFYRTADDDIEESVAFDLLDDDDQWIRTTDITGSG 261

Query: 3185 AIGRCNMYRISIPPRKGAILKKALEYLKESRVYIQDISSAKKLLIKDEPDFGMTLSDPFF 3006
            AIGRCN YRISI PR G   +KA+ Y    RV + ++ + K L ++DEPDFG+++SDPFF
Sbjct: 262  AIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCNRKMLRVRDEPDFGVSMSDPFF 321

Query: 3005 CIQHKQGITFGVLFLVNAIMHKGIINQHQMSDMFFDLLRLESEEVNLAALKHIYSYKRPL 2826
            C Q+ +GI+F V+FLVNA++HKGI+NQHQM++ FF LLR   EEVNLAALKH++SYK P+
Sbjct: 322  CFQN-EGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLRSHQEEVNLAALKHMFSYKWPV 380

Query: 2825 FDASRKLESVQQRLHNNPKLTERPKQLEDIVEVRRLIITPSKAYCLPPEVELSNRVLRHY 2646
             DA +KL  +++ L  NPKL ER  +L+DIVEVRRL+ITP+KAYCLPP VELSNRVLR+Y
Sbjct: 381  NDAIQKLVGIRKWLLKNPKLLERTGELDDIVEVRRLVITPTKAYCLPPTVELSNRVLRNY 440

Query: 2645 RDVADRFLRVTFMDEGMRTLNKNVLNSYAASIVRDVTSYSNPQRTTMFKRVKNILNKGFY 2466
            + VADRFLRVTFMDEGMR LN+NVL  YAA+IVR++TS SNPQRT +F+RVK+IL++GF+
Sbjct: 441  KHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSNSNPQRTAIFQRVKSILSRGFH 500

Query: 2465 ICGRKYCFLAFSANQLRDCSAWFFAEHKNVRVANIISWMGRFTNRNVAKCAARMGQCFSS 2286
            +CGRKY FLAFSANQLRD SAWFFAE   +RV  IISWMGRF+NRNVAKCAARMGQCFSS
Sbjct: 501  LCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQCFSS 560

Query: 2285 TYATVEVPLSQVDLQLPDIKRNNFVFSDGIGMMTSGLAAEVAARLRLTQNPPCAYQIRYA 2106
            TYATVEVP S+V+ +LPDI+RN +VFSDGIGM+++ LA EVA +L L+ NPP AYQIRYA
Sbjct: 561  TYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAVEVAEKLHLSVNPPSAYQIRYA 620

Query: 2105 GCKGVIACWPSKTNGHRLYLRPSMQKFESSHTILEICSWTRFQPGFLNRQIITLLSALDV 1926
            GCKGV+ACWP+K +G RL LRPSM+KF+S+HTILEICSWTRFQPGFLNRQI+TLLS+LDV
Sbjct: 621  GCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSSLDV 680

Query: 1925 RDNIFWEMQESMMLRLNLMLEDTDVAFDVITASCAEQGNTAAIMLSAGFNPKTEPHLRGM 1746
            +D IFWEMQ+ M+  L+ ML D+DVAFDVITASCAE GNTAAIMLSAGF P++EPHLRGM
Sbjct: 681  KDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGNTAAIMLSAGFKPQSEPHLRGM 740

Query: 1745 LTSVRAAQLRDLRERARIFVPSGRWLMGCLDELAVLEQGQCFIQVSGPCLENCFSHHGSK 1566
            L+S+RA+QL DLR +ARIFVPSGRWLMGCLDEL  LEQGQCFIQVS P LENCF  HG K
Sbjct: 741  LSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFIKHGPK 800

Query: 1565 FSETQKNLQVIKGLVAIAKNPCLHPGDVRILEAVDAPELQHLSDCLVFPQKGDRPHTNEA 1386
            FS+ +KNLQV+KGLV IAKNPCLHPGDVRILEAVD P L HL DCLVFPQKGDRPH+NEA
Sbjct: 801  FSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGLHHLYDCLVFPQKGDRPHSNEA 860

Query: 1385 SGSDLDGDLYFVTWDSNLIPPSKTSWMPMDYAPVEAKSLPREVKHPDIIDFFSKNMVTES 1206
            SGSDLDGDLYFVTWD NLIPPSK SW+PM+Y P E K + R+V H DIIDFFSKNMV ES
Sbjct: 861  SGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQMGRQVNHMDIIDFFSKNMVQES 920

Query: 1205 LGTICNAHVVHADLSEYGALDEKCIKLAEMAAIAVDFPKTGKIVTMPFEYKPKMYPDFMG 1026
            LG ICNAHVVHADLSE+GALDEKC+KLAE+AA+AVDFPKTGK+VTMPF+ KPKMYPDFMG
Sbjct: 921  LGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMG 980

Query: 1025 KEDFQSYKSKKILGKLYRQVKDAYDEGEAATSDLIFSLNKIPYDTDLEIPGSEQFIKHAW 846
            KE+FQSYKSKKILGKLYRQVKD  D     ++ L    N IPYD+ LEIPGS  FI  AW
Sbjct: 981  KEEFQSYKSKKILGKLYRQVKDVCDTEGEVSAGLELVPNDIPYDSSLEIPGSTAFIDDAW 1040

Query: 845  NSKCSYDGQLNGLLGQYRVTREEEVVTGHIWSMPKYSSKKLGDLKERLKHAYNNLRKEFR 666
            NSKCSYDGQL+GLLGQY+V REEEVVTGHIWSMPKYS+KK G+LKERLKHAYN LRKEFR
Sbjct: 1041 NSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNTLRKEFR 1100

Query: 665  RVFEQIEPDFEFLADDEKNAIYEKKASAWYQVTYHPTWLQRSLELHHPDCVGETVMLSFA 486
             VFE++EPDF+ L DDEKN +YE+KASAWYQVTY+P W+ RSLEL  PD V  TVMLSFA
Sbjct: 1101 NVFERMEPDFDLLPDDEKNDMYERKASAWYQVTYNPHWVARSLELQLPDAVSSTVMLSFA 1160

Query: 485  WIAVDYLAQIKIRRRGSWNLDSSKPIDSLGRYLADKI 375
            WIA DYLA+IKIR RG    DS+KPI+SLGRYL D I
Sbjct: 1161 WIAADYLARIKIRHRGLQYSDSTKPINSLGRYLVDNI 1197


>ref|XP_009758053.1| PREDICTED: RNA-dependent RNA polymerase 6 [Nicotiana sylvestris]
          Length = 1197

 Score = 1510 bits (3909), Expect = 0.0
 Identities = 735/997 (73%), Positives = 848/997 (85%)
 Frame = -3

Query: 3365 EINAIRQYQDSSGFVILLQLASSPSIHYRTADDDIEVSVPFDLLDDDDPWIRTTDFTPSG 3186
            EIN I++ +D +  VILLQLASSP + YRTADDDIE SV FDLLDDDD WIRTTD T SG
Sbjct: 202  EINEIKKCKDFTSLVILLQLASSPLVFYRTADDDIEESVAFDLLDDDDQWIRTTDITGSG 261

Query: 3185 AIGRCNMYRISIPPRKGAILKKALEYLKESRVYIQDISSAKKLLIKDEPDFGMTLSDPFF 3006
            AIGRCN YRISI PR G   +KA+ Y    RV + ++ + K L ++DEPDFG+++SDPFF
Sbjct: 262  AIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCNRKMLRVRDEPDFGVSMSDPFF 321

Query: 3005 CIQHKQGITFGVLFLVNAIMHKGIINQHQMSDMFFDLLRLESEEVNLAALKHIYSYKRPL 2826
            C Q+ +GI+F V+FLVNA++HKGI+NQHQM++ FF LLR   EEVNLAALKH++SYK P+
Sbjct: 322  CFQN-EGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLRSRQEEVNLAALKHMFSYKWPV 380

Query: 2825 FDASRKLESVQQRLHNNPKLTERPKQLEDIVEVRRLIITPSKAYCLPPEVELSNRVLRHY 2646
             DA +KL  +Q+ L  NPKL ER  +L+DIVEVRRL+ITP+KAYCLPP VELSNRVLR+Y
Sbjct: 381  NDAIQKLVGIQKWLMKNPKLLERTGELDDIVEVRRLVITPTKAYCLPPTVELSNRVLRNY 440

Query: 2645 RDVADRFLRVTFMDEGMRTLNKNVLNSYAASIVRDVTSYSNPQRTTMFKRVKNILNKGFY 2466
            + VADRFLRVTFMDEGMR LN+NVL  YAA+IVR++TS SNPQRT +F+RVK+IL++GF+
Sbjct: 441  KHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSNSNPQRTAIFQRVKSILSRGFH 500

Query: 2465 ICGRKYCFLAFSANQLRDCSAWFFAEHKNVRVANIISWMGRFTNRNVAKCAARMGQCFSS 2286
            +CGRKY FLAFSANQLRD SAWFFAE   +RV  IISWMGRF+NRNVAKCAARMGQCFSS
Sbjct: 501  LCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQCFSS 560

Query: 2285 TYATVEVPLSQVDLQLPDIKRNNFVFSDGIGMMTSGLAAEVAARLRLTQNPPCAYQIRYA 2106
            TYATVEVP  +V+ +LPDI+RN +VFSDGIGM+++ LA EVA +L L+ NPP AYQIRYA
Sbjct: 561  TYATVEVPSREVNSELPDIERNGYVFSDGIGMISADLAIEVAEKLHLSVNPPSAYQIRYA 620

Query: 2105 GCKGVIACWPSKTNGHRLYLRPSMQKFESSHTILEICSWTRFQPGFLNRQIITLLSALDV 1926
            GCKGV+ACWP+K +G RL LRPSM+KF+S+HTILEICSWTRFQPGFLNRQI+TLLS+LDV
Sbjct: 621  GCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSSLDV 680

Query: 1925 RDNIFWEMQESMMLRLNLMLEDTDVAFDVITASCAEQGNTAAIMLSAGFNPKTEPHLRGM 1746
            +D IFWEMQ+ M+  L+ ML D+DVAFDVITASCAE GNTAAIMLSAGF P++EPHLRGM
Sbjct: 681  KDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGNTAAIMLSAGFKPQSEPHLRGM 740

Query: 1745 LTSVRAAQLRDLRERARIFVPSGRWLMGCLDELAVLEQGQCFIQVSGPCLENCFSHHGSK 1566
            L+S+RA+QL DLR +ARIFVPSGRWLMGCLDEL  LEQGQCFIQVS P LENCF  HG K
Sbjct: 741  LSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFIKHGPK 800

Query: 1565 FSETQKNLQVIKGLVAIAKNPCLHPGDVRILEAVDAPELQHLSDCLVFPQKGDRPHTNEA 1386
            FS+ ++NLQV+KGLV IAKNPCLHPGDVRILEAVD P L HL DCLVFPQKGDRPH+NEA
Sbjct: 801  FSDIKQNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGLHHLYDCLVFPQKGDRPHSNEA 860

Query: 1385 SGSDLDGDLYFVTWDSNLIPPSKTSWMPMDYAPVEAKSLPREVKHPDIIDFFSKNMVTES 1206
            SGSDLDGDLYFVTWD NLIPPSK SW+PM+Y P E K L R+V H DIIDFFSKNMV ES
Sbjct: 861  SGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQLGRQVNHMDIIDFFSKNMVQES 920

Query: 1205 LGTICNAHVVHADLSEYGALDEKCIKLAEMAAIAVDFPKTGKIVTMPFEYKPKMYPDFMG 1026
            LG ICNAHVVHADLSE+GALDEKC+KLAE+AA+AVDFPKTGK+VTMPF+ KPKMYPDFMG
Sbjct: 921  LGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMG 980

Query: 1025 KEDFQSYKSKKILGKLYRQVKDAYDEGEAATSDLIFSLNKIPYDTDLEIPGSEQFIKHAW 846
            KE+FQSYKSKKILGKLYRQVKD  D     ++ L    N IPYD+ LEIPGS  FI  AW
Sbjct: 981  KEEFQSYKSKKILGKLYRQVKDVCDTEGEVSAGLELVPNDIPYDSSLEIPGSTAFIDDAW 1040

Query: 845  NSKCSYDGQLNGLLGQYRVTREEEVVTGHIWSMPKYSSKKLGDLKERLKHAYNNLRKEFR 666
            NSKCSYDGQL+GLLGQY+V REEEVVTGHIWSMPKYS+KK G+LKERLKHAYN LRKEFR
Sbjct: 1041 NSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNTLRKEFR 1100

Query: 665  RVFEQIEPDFEFLADDEKNAIYEKKASAWYQVTYHPTWLQRSLELHHPDCVGETVMLSFA 486
             VFE+++PDF+ L DDEKN +YE+KASAWYQVTY+P W+ RSLEL  PD +  TVMLSFA
Sbjct: 1101 NVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYNPHWVARSLELQLPDAISSTVMLSFA 1160

Query: 485  WIAVDYLAQIKIRRRGSWNLDSSKPIDSLGRYLADKI 375
            WIA DYLA+IKIR RG    DS+KPI+SLGRYL DKI
Sbjct: 1161 WIAADYLARIKIRHRGLQYSDSTKPINSLGRYLVDKI 1197


>gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
          Length = 1197

 Score = 1506 bits (3899), Expect = 0.0
 Identities = 734/997 (73%), Positives = 846/997 (84%)
 Frame = -3

Query: 3365 EINAIRQYQDSSGFVILLQLASSPSIHYRTADDDIEVSVPFDLLDDDDPWIRTTDFTPSG 3186
            EIN I++++D +  VILLQLASSP + YRTADDDIE SV FDLLDDDD WIRTTD T SG
Sbjct: 202  EINEIKKFKDFTSLVILLQLASSPLVFYRTADDDIEESVAFDLLDDDDQWIRTTDITGSG 261

Query: 3185 AIGRCNMYRISIPPRKGAILKKALEYLKESRVYIQDISSAKKLLIKDEPDFGMTLSDPFF 3006
            AIGRCN YRISI PR G   +KA+ Y    RV + ++ + K L ++DEPDFG+++SDPFF
Sbjct: 262  AIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCNRKMLRVRDEPDFGVSMSDPFF 321

Query: 3005 CIQHKQGITFGVLFLVNAIMHKGIINQHQMSDMFFDLLRLESEEVNLAALKHIYSYKRPL 2826
            C Q+ +GI+F V+FLVNA++HKGI+NQHQM++ FF LLR   EEVNLAALKH++SYK P+
Sbjct: 322  CFQN-EGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLRSHQEEVNLAALKHMFSYKWPV 380

Query: 2825 FDASRKLESVQQRLHNNPKLTERPKQLEDIVEVRRLIITPSKAYCLPPEVELSNRVLRHY 2646
             DA +KL  +Q+ L  NPKL ER  +L+DIVEVRRL+ITP+KAYCLPP VELSNRVLR+Y
Sbjct: 381  NDAIQKLVGIQKWLLKNPKLLERTGELDDIVEVRRLVITPTKAYCLPPTVELSNRVLRNY 440

Query: 2645 RDVADRFLRVTFMDEGMRTLNKNVLNSYAASIVRDVTSYSNPQRTTMFKRVKNILNKGFY 2466
            + VADRFLRVTFMDEGMR LN+NVL  YAA+IVR++TS SNPQRT +F+RVK+IL++GF+
Sbjct: 441  KHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSNSNPQRTAIFQRVKSILSRGFH 500

Query: 2465 ICGRKYCFLAFSANQLRDCSAWFFAEHKNVRVANIISWMGRFTNRNVAKCAARMGQCFSS 2286
            +CGRKY FLAFSANQLRD SAWFFAE   +RV  IISWMGRF+NRNVAKCAARMGQCFSS
Sbjct: 501  LCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQCFSS 560

Query: 2285 TYATVEVPLSQVDLQLPDIKRNNFVFSDGIGMMTSGLAAEVAARLRLTQNPPCAYQIRYA 2106
            TYATVEVP S+V+ +LPDI+RN +VFSDGIGM+++ LA EVA +L L+ NPP AYQIRYA
Sbjct: 561  TYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLALEVAEKLHLSVNPPSAYQIRYA 620

Query: 2105 GCKGVIACWPSKTNGHRLYLRPSMQKFESSHTILEICSWTRFQPGFLNRQIITLLSALDV 1926
            GCKGV+ACWP+K +G  L LRPSM+KF+S+HTILEICSWTRFQPGFLNRQI+TLLS+LDV
Sbjct: 621  GCKGVVACWPTKNDGILLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSSLDV 680

Query: 1925 RDNIFWEMQESMMLRLNLMLEDTDVAFDVITASCAEQGNTAAIMLSAGFNPKTEPHLRGM 1746
            +D IFWEMQ+ M+  LN ML D+DVAFDVITASCAE GNTAAIMLSAGF P++EPHLRGM
Sbjct: 681  KDGIFWEMQKEMISGLNKMLVDSDVAFDVITASCAEAGNTAAIMLSAGFKPQSEPHLRGM 740

Query: 1745 LTSVRAAQLRDLRERARIFVPSGRWLMGCLDELAVLEQGQCFIQVSGPCLENCFSHHGSK 1566
            L+S+RA+QL DLR +ARIFVPSGRWLMGCLDEL  LEQGQCFIQVS P LENCF  HG K
Sbjct: 741  LSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFIKHGPK 800

Query: 1565 FSETQKNLQVIKGLVAIAKNPCLHPGDVRILEAVDAPELQHLSDCLVFPQKGDRPHTNEA 1386
            FS+ +KNLQV+KGLV IAKNPCLHPGDVRILEAVD P L HL DCLVFPQKGDRPH+NEA
Sbjct: 801  FSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGLHHLYDCLVFPQKGDRPHSNEA 860

Query: 1385 SGSDLDGDLYFVTWDSNLIPPSKTSWMPMDYAPVEAKSLPREVKHPDIIDFFSKNMVTES 1206
            SGSDLDGDLYFVTWD NLIPPSK SW+PM+Y P E K L R+V H DIIDFFSKNMV ES
Sbjct: 861  SGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQLGRQVNHMDIIDFFSKNMVQES 920

Query: 1205 LGTICNAHVVHADLSEYGALDEKCIKLAEMAAIAVDFPKTGKIVTMPFEYKPKMYPDFMG 1026
            LG ICNAHVVHADLSE+GALDEKC+KLAE+AA+AVDFPKTGK+VTMPF+ KPKMYPDFMG
Sbjct: 921  LGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMG 980

Query: 1025 KEDFQSYKSKKILGKLYRQVKDAYDEGEAATSDLIFSLNKIPYDTDLEIPGSEQFIKHAW 846
            KE+FQSYKSKKILGKLYRQVKD  D     ++ L    N IPYD+ LEIPGS  F+  AW
Sbjct: 981  KEEFQSYKSKKILGKLYRQVKDVCDTEGEVSAGLELVPNDIPYDSSLEIPGSTVFMGDAW 1040

Query: 845  NSKCSYDGQLNGLLGQYRVTREEEVVTGHIWSMPKYSSKKLGDLKERLKHAYNNLRKEFR 666
            N KCSYDGQL+GLLGQY+V REEEVVTGHIWSMPKYS+KK G+LKERLKHAYN LRKEFR
Sbjct: 1041 NCKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNMLRKEFR 1100

Query: 665  RVFEQIEPDFEFLADDEKNAIYEKKASAWYQVTYHPTWLQRSLELHHPDCVGETVMLSFA 486
             VFE+++PDF+ L DDEKN +YE+KASAWYQVTY+P W+ RSLEL  PD V  TVMLSFA
Sbjct: 1101 NVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYNPHWVARSLELQLPDAVSSTVMLSFA 1160

Query: 485  WIAVDYLAQIKIRRRGSWNLDSSKPIDSLGRYLADKI 375
            WIA DYLA+I IR RG    DS+KPI+SLGRYL D I
Sbjct: 1161 WIAADYLARINIRHRGLQYSDSTKPINSLGRYLVDNI 1197


>ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Solanum
            tuberosum] gi|565360032|ref|XP_006346785.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Solanum
            tuberosum]
          Length = 1198

 Score = 1506 bits (3898), Expect = 0.0
 Identities = 735/997 (73%), Positives = 844/997 (84%)
 Frame = -3

Query: 3365 EINAIRQYQDSSGFVILLQLASSPSIHYRTADDDIEVSVPFDLLDDDDPWIRTTDFTPSG 3186
            EIN I + +D +  V+LLQL SSP + YRTADDDIE SV FDLLDDDD WIRTTD T SG
Sbjct: 202  EINEINECKDFASLVLLLQLTSSPLVFYRTADDDIEESVAFDLLDDDDQWIRTTDITCSG 261

Query: 3185 AIGRCNMYRISIPPRKGAILKKALEYLKESRVYIQDISSAKKLLIKDEPDFGMTLSDPFF 3006
            AIGR N YRISI PR G  LKKA+ Y +ESRV + +  + + L ++DEPDFG++LS+PFF
Sbjct: 262  AIGRFNTYRISIRPRNGPSLKKAMNYFRESRVPVVEQGNRQMLRVRDEPDFGVSLSEPFF 321

Query: 3005 CIQHKQGITFGVLFLVNAIMHKGIINQHQMSDMFFDLLRLESEEVNLAALKHIYSYKRPL 2826
            C Q+ +GI+F VLFLVNA++ KGI+NQHQM+  FF LLR   E VNLAALKHI+SYKRP+
Sbjct: 322  CFQNHEGISFKVLFLVNAVLQKGIVNQHQMTAEFFSLLRKHQEGVNLAALKHIFSYKRPV 381

Query: 2825 FDASRKLESVQQRLHNNPKLTERPKQLEDIVEVRRLIITPSKAYCLPPEVELSNRVLRHY 2646
             DA +KL SVQ+ L  NP L ER  QL+D+VEVRRL+ITP+KAYCLPP VELSNRVLR Y
Sbjct: 382  NDAIQKLASVQKWLFKNPNLLERTGQLDDVVEVRRLVITPTKAYCLPPTVELSNRVLRKY 441

Query: 2645 RDVADRFLRVTFMDEGMRTLNKNVLNSYAASIVRDVTSYSNPQRTTMFKRVKNILNKGFY 2466
            + V+DRFLRVTFMDEGMR LN+NVL  YAA+IVR++TS SNPQRT +F+RVK+IL+KGFY
Sbjct: 442  KHVSDRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSSSNPQRTGIFQRVKSILSKGFY 501

Query: 2465 ICGRKYCFLAFSANQLRDCSAWFFAEHKNVRVANIISWMGRFTNRNVAKCAARMGQCFSS 2286
            +CGR+Y FLAFSANQLRD SAWFFAE   +RV NII+WMG+F NRNVAKCAARMGQCFSS
Sbjct: 502  LCGRRYSFLAFSANQLRDRSAWFFAEAPEIRVPNIINWMGKFGNRNVAKCAARMGQCFSS 561

Query: 2285 TYATVEVPLSQVDLQLPDIKRNNFVFSDGIGMMTSGLAAEVAARLRLTQNPPCAYQIRYA 2106
            TYATVEV  S+V+ +LPDI+RN +VFSDGIGMM++ L+ EVAA+L+L+ NPPCAYQIRYA
Sbjct: 562  TYATVEVLPSEVNSELPDIERNGYVFSDGIGMMSADLSIEVAAKLQLSVNPPCAYQIRYA 621

Query: 2105 GCKGVIACWPSKTNGHRLYLRPSMQKFESSHTILEICSWTRFQPGFLNRQIITLLSALDV 1926
            GCKGV+ACWP++ +G RL LRPSM+KF+S+HTILEICSWTR QPGFLNRQIITLLS+L+V
Sbjct: 622  GCKGVVACWPAEKDGIRLSLRPSMKKFDSNHTILEICSWTRLQPGFLNRQIITLLSSLEV 681

Query: 1925 RDNIFWEMQESMMLRLNLMLEDTDVAFDVITASCAEQGNTAAIMLSAGFNPKTEPHLRGM 1746
            +D +FWEMQ+ M+ +L+ +L D+DVAFDVITASCAE GNTAAIMLSAGF P++EPHLRGM
Sbjct: 682  KDEMFWEMQKEMLSKLDKILVDSDVAFDVITASCAEAGNTAAIMLSAGFKPQSEPHLRGM 741

Query: 1745 LTSVRAAQLRDLRERARIFVPSGRWLMGCLDELAVLEQGQCFIQVSGPCLENCFSHHGSK 1566
            L S+RAAQL DLR + R+FVPSGRWLMGCLDEL  LEQGQCFIQVS P LE CF  HG K
Sbjct: 742  LASIRAAQLGDLRNKTRMFVPSGRWLMGCLDELRKLEQGQCFIQVSSPSLETCFVKHGPK 801

Query: 1565 FSETQKNLQVIKGLVAIAKNPCLHPGDVRILEAVDAPELQHLSDCLVFPQKGDRPHTNEA 1386
            FSE +KNLQVIKGLV IAKNPCLHPGDVRILEAVD P L HL DCLVFPQKGDRPH+NEA
Sbjct: 802  FSEIKKNLQVIKGLVVIAKNPCLHPGDVRILEAVDVPGLHHLYDCLVFPQKGDRPHSNEA 861

Query: 1385 SGSDLDGDLYFVTWDSNLIPPSKTSWMPMDYAPVEAKSLPREVKHPDIIDFFSKNMVTES 1206
            SGSDLDGDLYFVTWD NLIPPSK SWMPMDYAP EAK L R+V+H DIIDFFSKNMV ES
Sbjct: 862  SGSDLDGDLYFVTWDENLIPPSKKSWMPMDYAPAEAKQLGRQVQHTDIIDFFSKNMVQES 921

Query: 1205 LGTICNAHVVHADLSEYGALDEKCIKLAEMAAIAVDFPKTGKIVTMPFEYKPKMYPDFMG 1026
            LG ICNAHVVHADLSE+GALDEKC+KLAE+AA+AVDFPKTGK+VTMPF+ KPKMYPDFMG
Sbjct: 922  LGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMG 981

Query: 1025 KEDFQSYKSKKILGKLYRQVKDAYDEGEAATSDLIFSLNKIPYDTDLEIPGSEQFIKHAW 846
            KE FQ+Y+SKKILGKLYRQV D YD     +S L F    IPYDT++EI G E FI  AW
Sbjct: 982  KEPFQTYESKKILGKLYRQVIDVYDAEGGESSGLEFVPKDIPYDTNIEILGYEDFIDDAW 1041

Query: 845  NSKCSYDGQLNGLLGQYRVTREEEVVTGHIWSMPKYSSKKLGDLKERLKHAYNNLRKEFR 666
            N KCSYDGQLNGLLGQY+V  EEEVVTGHIWSMPKYS+KK G+LKERLKHAYN LRKEFR
Sbjct: 1042 NHKCSYDGQLNGLLGQYKVNGEEEVVTGHIWSMPKYSAKKQGELKERLKHAYNTLRKEFR 1101

Query: 665  RVFEQIEPDFEFLADDEKNAIYEKKASAWYQVTYHPTWLQRSLELHHPDCVGETVMLSFA 486
             VFEQ+EPDF+ L  DEKN +YE+KASAWY+VTYHP W+ RSLEL  PD V   VMLSFA
Sbjct: 1102 NVFEQMEPDFDMLPVDEKNDMYERKASAWYRVTYHPHWVTRSLELQLPDAVSNGVMLSFA 1161

Query: 485  WIAVDYLAQIKIRRRGSWNLDSSKPIDSLGRYLADKI 375
            WIA DY+A+IKIR+RG  N DS+KPI+ LGRYL +KI
Sbjct: 1162 WIAADYIARIKIRQRGMQNSDSTKPINFLGRYLVNKI 1198


>emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score = 1501 bits (3885), Expect = 0.0
 Identities = 733/997 (73%), Positives = 843/997 (84%)
 Frame = -3

Query: 3365 EINAIRQYQDSSGFVILLQLASSPSIHYRTADDDIEVSVPFDLLDDDDPWIRTTDFTPSG 3186
            EIN I++ +D +  VIL QLASSP + YRTADDDIE SV FDLLDDDD WIRTTD T SG
Sbjct: 202  EINEIKKCKDFTSLVILFQLASSPLVFYRTADDDIEESVAFDLLDDDDQWIRTTDITGSG 261

Query: 3185 AIGRCNMYRISIPPRKGAILKKALEYLKESRVYIQDISSAKKLLIKDEPDFGMTLSDPFF 3006
            AIGRCN YRISI PR G   +KA+ Y    RV + ++ + K L +KDEPDFG+++SDPFF
Sbjct: 262  AIGRCNTYRISIRPRNGPSFEKAMAYFSFRRVPMVEMCNRKMLRVKDEPDFGVSMSDPFF 321

Query: 3005 CIQHKQGITFGVLFLVNAIMHKGIINQHQMSDMFFDLLRLESEEVNLAALKHIYSYKRPL 2826
            C Q+ +GI+F V+FLVNA++HKGI+NQHQM++ FF LLR   EEVNLAALKH++SYK P+
Sbjct: 322  CFQN-EGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLRSRQEEVNLAALKHMFSYKWPV 380

Query: 2825 FDASRKLESVQQRLHNNPKLTERPKQLEDIVEVRRLIITPSKAYCLPPEVELSNRVLRHY 2646
             DA +KL  +Q+ L  NPKL ER  +L+DIVEVRRL+ITP+KAYCLPP VELSNRVLR+Y
Sbjct: 381  NDAIQKLVGIQKWLLKNPKLLERTGELDDIVEVRRLVITPTKAYCLPPTVELSNRVLRNY 440

Query: 2645 RDVADRFLRVTFMDEGMRTLNKNVLNSYAASIVRDVTSYSNPQRTTMFKRVKNILNKGFY 2466
            + VADRFLRVTFMDEGMR LN+NVL  YAA+IVR++TS SNPQRT +F+RVK+IL++GF+
Sbjct: 441  KHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSNSNPQRTAIFQRVKSILSRGFH 500

Query: 2465 ICGRKYCFLAFSANQLRDCSAWFFAEHKNVRVANIISWMGRFTNRNVAKCAARMGQCFSS 2286
            +CGRKY FLAFSANQLRD SAWFFAE   +RV  IISWMGRF+NRNVAKCAARMGQCFSS
Sbjct: 501  LCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQCFSS 560

Query: 2285 TYATVEVPLSQVDLQLPDIKRNNFVFSDGIGMMTSGLAAEVAARLRLTQNPPCAYQIRYA 2106
            TYATVEVP S+V+ +LPDI+RN +VFSDGIGM+++ LA EVA +L L  NPP AYQIRYA
Sbjct: 561  TYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAIEVAEKLHLNVNPPSAYQIRYA 620

Query: 2105 GCKGVIACWPSKTNGHRLYLRPSMQKFESSHTILEICSWTRFQPGFLNRQIITLLSALDV 1926
            G KGV+ACWP+K +G  L LRPSM+KF+S+HTILEICSWTRFQPGFLNRQI+TLLS+LDV
Sbjct: 621  GYKGVVACWPTKNDGILLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSSLDV 680

Query: 1925 RDNIFWEMQESMMLRLNLMLEDTDVAFDVITASCAEQGNTAAIMLSAGFNPKTEPHLRGM 1746
            +D IFWEMQ+ M+  L+ ML D+DVAFDVITASCAE GNTAA+MLSAGF P++EPHLRGM
Sbjct: 681  KDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGNTAALMLSAGFKPQSEPHLRGM 740

Query: 1745 LTSVRAAQLRDLRERARIFVPSGRWLMGCLDELAVLEQGQCFIQVSGPCLENCFSHHGSK 1566
            L+S+RA+QL DLR +ARIFVPSGRWLMGCLDEL  LEQGQCFIQVS P LENCF  HG K
Sbjct: 741  LSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFVKHGPK 800

Query: 1565 FSETQKNLQVIKGLVAIAKNPCLHPGDVRILEAVDAPELQHLSDCLVFPQKGDRPHTNEA 1386
            FS+ +KNLQV+KGLV IAKNPCLHPGDVRILEAVD P L HL DCLVFPQKGDRPH+NEA
Sbjct: 801  FSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPSLSHLYDCLVFPQKGDRPHSNEA 860

Query: 1385 SGSDLDGDLYFVTWDSNLIPPSKTSWMPMDYAPVEAKSLPREVKHPDIIDFFSKNMVTES 1206
            SGSDLDGDLYFVTWD NLIPPSK SW+PM+Y P E K L R+V H DIIDFFSKNMV ES
Sbjct: 861  SGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQLGRQVNHMDIIDFFSKNMVQES 920

Query: 1205 LGTICNAHVVHADLSEYGALDEKCIKLAEMAAIAVDFPKTGKIVTMPFEYKPKMYPDFMG 1026
            LG ICNAHVVHADLSE+GALDEKC+KLAE+AA+AVDFPKTGK+VTMPF+ KPKMYPDFMG
Sbjct: 921  LGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMG 980

Query: 1025 KEDFQSYKSKKILGKLYRQVKDAYDEGEAATSDLIFSLNKIPYDTDLEIPGSEQFIKHAW 846
            KE+FQSYKSKKILGKLYRQVKD  D     ++ L      IPYDT L IPGS  FI  AW
Sbjct: 981  KEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPKDIPYDTTLVIPGSTVFIDDAW 1040

Query: 845  NSKCSYDGQLNGLLGQYRVTREEEVVTGHIWSMPKYSSKKLGDLKERLKHAYNNLRKEFR 666
            NSKCSYDGQL+GLLGQY+V REEEVVTGHIWSMPKYS+KK G+LKERLKHAYN LRKEFR
Sbjct: 1041 NSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNTLRKEFR 1100

Query: 665  RVFEQIEPDFEFLADDEKNAIYEKKASAWYQVTYHPTWLQRSLELHHPDCVGETVMLSFA 486
             VFE+++PDF+ L DDEKN +YE+KASAWYQVTY+P W+ RSLEL  PD +  TVMLSFA
Sbjct: 1101 NVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYNPHWVARSLELQLPDAISSTVMLSFA 1160

Query: 485  WIAVDYLAQIKIRRRGSWNLDSSKPIDSLGRYLADKI 375
            WIA DYLA+IKIR RG    DS+KPI+SLGRYL DKI
Sbjct: 1161 WIAADYLARIKIRHRGLQYSDSTKPINSLGRYLVDKI 1197


>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score = 1501 bits (3885), Expect = 0.0
 Identities = 734/997 (73%), Positives = 842/997 (84%)
 Frame = -3

Query: 3365 EINAIRQYQDSSGFVILLQLASSPSIHYRTADDDIEVSVPFDLLDDDDPWIRTTDFTPSG 3186
            EIN I++ +D +  VIL QLASSP + YRTADDDIE SV FDLLDDDD WIRTTD T SG
Sbjct: 202  EINEIKKCKDFTSLVILFQLASSPLVFYRTADDDIEESVAFDLLDDDDQWIRTTDITGSG 261

Query: 3185 AIGRCNMYRISIPPRKGAILKKALEYLKESRVYIQDISSAKKLLIKDEPDFGMTLSDPFF 3006
            AIGRCN YRISI PR G   +KA+ Y    RV + ++ + K L +KDEPDFG+++SDPFF
Sbjct: 262  AIGRCNTYRISIRPRNGPSFEKAMAYFSFRRVPMVEMCNRKMLRVKDEPDFGVSMSDPFF 321

Query: 3005 CIQHKQGITFGVLFLVNAIMHKGIINQHQMSDMFFDLLRLESEEVNLAALKHIYSYKRPL 2826
            C Q+ +GI+F VLFLVNA++HKGI+NQHQM++ FF LLR   EEVN AALKH++SYK P+
Sbjct: 322  CFQN-EGISFRVLFLVNAVLHKGIVNQHQMANEFFYLLRSHQEEVNSAALKHMFSYKWPV 380

Query: 2825 FDASRKLESVQQRLHNNPKLTERPKQLEDIVEVRRLIITPSKAYCLPPEVELSNRVLRHY 2646
             DA +KL  +Q+ L  NPKL +R  +L+DIVEVRRL+ITP+KAYCLPP VELSNRVLR+Y
Sbjct: 381  NDAIQKLAGIQKWLLKNPKLLDRTGELDDIVEVRRLVITPTKAYCLPPTVELSNRVLRNY 440

Query: 2645 RDVADRFLRVTFMDEGMRTLNKNVLNSYAASIVRDVTSYSNPQRTTMFKRVKNILNKGFY 2466
            + VADRFLRVTFMDEGMR LN+NVL  YAA+IVR++TS SNPQRT +F+RVK+IL+KGF+
Sbjct: 441  KHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSNSNPQRTAIFQRVKSILSKGFH 500

Query: 2465 ICGRKYCFLAFSANQLRDCSAWFFAEHKNVRVANIISWMGRFTNRNVAKCAARMGQCFSS 2286
            +CGRKY FLAFSANQLRD SAWFFAE   +RV  IISWMGRF+NRNVAKCAARMGQCFSS
Sbjct: 501  LCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQCFSS 560

Query: 2285 TYATVEVPLSQVDLQLPDIKRNNFVFSDGIGMMTSGLAAEVAARLRLTQNPPCAYQIRYA 2106
            TYATVEVP S+V+ +LPDI+RN +VFSDGIGM+++ LA EVA +L L+ NPP AYQIRYA
Sbjct: 561  TYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAIEVAEKLHLSVNPPSAYQIRYA 620

Query: 2105 GCKGVIACWPSKTNGHRLYLRPSMQKFESSHTILEICSWTRFQPGFLNRQIITLLSALDV 1926
            GCKGV+ACWP+K +G RL LRPSM+KF+S+HTILEICSWTRFQPGFLNRQI+TLLS+LDV
Sbjct: 621  GCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSSLDV 680

Query: 1925 RDNIFWEMQESMMLRLNLMLEDTDVAFDVITASCAEQGNTAAIMLSAGFNPKTEPHLRGM 1746
            +D IFWEMQ+ M+  L+ ML D+DVAFDVITASCAE GNTAA+MLSAGF P++EPHLRGM
Sbjct: 681  KDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGNTAALMLSAGFKPQSEPHLRGM 740

Query: 1745 LTSVRAAQLRDLRERARIFVPSGRWLMGCLDELAVLEQGQCFIQVSGPCLENCFSHHGSK 1566
            L+S+RA+QL DLR +ARIFVPSGRWLMGCLDEL  LEQGQCFIQVS P LENCF  HG K
Sbjct: 741  LSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFVKHGPK 800

Query: 1565 FSETQKNLQVIKGLVAIAKNPCLHPGDVRILEAVDAPELQHLSDCLVFPQKGDRPHTNEA 1386
            FS+ +KNLQV+KGLV IAKNPCLHPGDVRILEAVD P L HL DCLVFPQKGDRPH+NEA
Sbjct: 801  FSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPSLSHLYDCLVFPQKGDRPHSNEA 860

Query: 1385 SGSDLDGDLYFVTWDSNLIPPSKTSWMPMDYAPVEAKSLPREVKHPDIIDFFSKNMVTES 1206
            SGSDLDGDLYFVTWD NLIPPSK SW+PM+Y P E K L R+V H DIIDFFSKNMV ES
Sbjct: 861  SGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQLGRQVNHMDIIDFFSKNMVQES 920

Query: 1205 LGTICNAHVVHADLSEYGALDEKCIKLAEMAAIAVDFPKTGKIVTMPFEYKPKMYPDFMG 1026
            LG ICNAHVVHADLSE+GALDEKC+KLAE+AA+AVDFPKTGK+VTMPF+ KPKMYPDFMG
Sbjct: 921  LGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMG 980

Query: 1025 KEDFQSYKSKKILGKLYRQVKDAYDEGEAATSDLIFSLNKIPYDTDLEIPGSEQFIKHAW 846
            KE+FQSYKSKKILGKLYRQVKD  D     ++ L      IPYDT LEI GS  FI  AW
Sbjct: 981  KEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPKDIPYDTTLEILGSTTFIDDAW 1040

Query: 845  NSKCSYDGQLNGLLGQYRVTREEEVVTGHIWSMPKYSSKKLGDLKERLKHAYNNLRKEFR 666
            NSKCSYDGQLNGLLGQY+V REEEVVTG+IWSMPKY++KK G+LKERLKHAYN LRKEFR
Sbjct: 1041 NSKCSYDGQLNGLLGQYKVNREEEVVTGYIWSMPKYNAKKQGELKERLKHAYNTLRKEFR 1100

Query: 665  RVFEQIEPDFEFLADDEKNAIYEKKASAWYQVTYHPTWLQRSLELHHPDCVGETVMLSFA 486
             VFE++EPDF+ L DDEKN +YE+KASAWYQVTYHP W+ RSLEL   D V  TVMLSFA
Sbjct: 1101 NVFERMEPDFDLLPDDEKNDMYERKASAWYQVTYHPHWVARSLELQLADAVSNTVMLSFA 1160

Query: 485  WIAVDYLAQIKIRRRGSWNLDSSKPIDSLGRYLADKI 375
            WIA DYLA+IKIR R     DS+KPI+SLGRYL D I
Sbjct: 1161 WIAADYLARIKIRHRRLQYSDSTKPINSLGRYLVDNI 1197


>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score = 1500 bits (3884), Expect = 0.0
 Identities = 733/997 (73%), Positives = 843/997 (84%)
 Frame = -3

Query: 3365 EINAIRQYQDSSGFVILLQLASSPSIHYRTADDDIEVSVPFDLLDDDDPWIRTTDFTPSG 3186
            EIN I++ +D +  VILLQLASSP + YRTADDDIE SV FDLLDDDD WIRTTD T SG
Sbjct: 202  EINEIKKCKDFTSLVILLQLASSPLVFYRTADDDIEESVAFDLLDDDDQWIRTTDITGSG 261

Query: 3185 AIGRCNMYRISIPPRKGAILKKALEYLKESRVYIQDISSAKKLLIKDEPDFGMTLSDPFF 3006
            AIGRCN YRISI PR G   +KA+ Y    RV + ++ + K L +KDEPDFG+++SDPFF
Sbjct: 262  AIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCNRKMLRVKDEPDFGVSMSDPFF 321

Query: 3005 CIQHKQGITFGVLFLVNAIMHKGIINQHQMSDMFFDLLRLESEEVNLAALKHIYSYKRPL 2826
            C Q+ +GI+F V+FLVNA++HKGI+NQHQM++ FF LLR   EEVN AALKH++SYK P+
Sbjct: 322  CFQN-EGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLRSRQEEVNSAALKHMFSYKWPV 380

Query: 2825 FDASRKLESVQQRLHNNPKLTERPKQLEDIVEVRRLIITPSKAYCLPPEVELSNRVLRHY 2646
             DA +KL  +Q+ L  NPKL +R  +L+DIVEVRRL+ITP+KAYCLPP VELSNRVLR+Y
Sbjct: 381  NDAIQKLVGIQKWLLKNPKLLDRTGELDDIVEVRRLVITPTKAYCLPPTVELSNRVLRNY 440

Query: 2645 RDVADRFLRVTFMDEGMRTLNKNVLNSYAASIVRDVTSYSNPQRTTMFKRVKNILNKGFY 2466
            + VADRFLRVTFMDEGMR LN+NVL  YAA+IVR++TS SNPQRT +F+RVK+IL+KGF+
Sbjct: 441  KHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSNSNPQRTAIFQRVKSILSKGFH 500

Query: 2465 ICGRKYCFLAFSANQLRDCSAWFFAEHKNVRVANIISWMGRFTNRNVAKCAARMGQCFSS 2286
            +CGRKY FLAFSANQLRD SAWFFAE   +RV  IISWMGRF+NRNVAKCAARMGQCFSS
Sbjct: 501  LCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQCFSS 560

Query: 2285 TYATVEVPLSQVDLQLPDIKRNNFVFSDGIGMMTSGLAAEVAARLRLTQNPPCAYQIRYA 2106
            TYATVEVP  +V+ +LPDI+RN +VFSDGIGM+++ LA EVA +L L+ NPP AYQIRYA
Sbjct: 561  TYATVEVPSREVNSELPDIERNGYVFSDGIGMISADLAIEVAEKLHLSVNPPSAYQIRYA 620

Query: 2105 GCKGVIACWPSKTNGHRLYLRPSMQKFESSHTILEICSWTRFQPGFLNRQIITLLSALDV 1926
            GCKGV+ACWP+K +G RL LRPSM+KF+S+HTILEICSWTRFQPGFLNRQI+TLLS+LDV
Sbjct: 621  GCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSSLDV 680

Query: 1925 RDNIFWEMQESMMLRLNLMLEDTDVAFDVITASCAEQGNTAAIMLSAGFNPKTEPHLRGM 1746
            +D IFWEMQ+ M+  L+ ML D+DVAFDVITASCAE GNTAAIMLSAGF P++EPHLRGM
Sbjct: 681  KDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGNTAAIMLSAGFKPQSEPHLRGM 740

Query: 1745 LTSVRAAQLRDLRERARIFVPSGRWLMGCLDELAVLEQGQCFIQVSGPCLENCFSHHGSK 1566
            L+S+RA+QL DLR +ARIFVPSGRWLMGCLDEL  LEQGQCFIQVS P LENCF  HG K
Sbjct: 741  LSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFVKHGPK 800

Query: 1565 FSETQKNLQVIKGLVAIAKNPCLHPGDVRILEAVDAPELQHLSDCLVFPQKGDRPHTNEA 1386
            FS+ ++NLQV+KGLV IAKNPCLHPGDVRILEAVD P L HL DCLVFPQKGDRPH+NEA
Sbjct: 801  FSDIKQNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPSLSHLYDCLVFPQKGDRPHSNEA 860

Query: 1385 SGSDLDGDLYFVTWDSNLIPPSKTSWMPMDYAPVEAKSLPREVKHPDIIDFFSKNMVTES 1206
            SGSDLDGDLYFVTWD NLIPPSK SW+PM+Y P E K L R+V H DIIDFFSKNMV ES
Sbjct: 861  SGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQLGRQVNHMDIIDFFSKNMVQES 920

Query: 1205 LGTICNAHVVHADLSEYGALDEKCIKLAEMAAIAVDFPKTGKIVTMPFEYKPKMYPDFMG 1026
            LG ICNAHVVHADLSE+GALDEKC+KLAE+AA+AVDFPKTGK+VTMPF+ KPKMYPDFMG
Sbjct: 921  LGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMG 980

Query: 1025 KEDFQSYKSKKILGKLYRQVKDAYDEGEAATSDLIFSLNKIPYDTDLEIPGSEQFIKHAW 846
            KE+FQSYKSKKILGKLYRQVKD  D     ++ L      IPYD+ LEI GS  FI  AW
Sbjct: 981  KEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPKDIPYDSTLEILGSTAFIDDAW 1040

Query: 845  NSKCSYDGQLNGLLGQYRVTREEEVVTGHIWSMPKYSSKKLGDLKERLKHAYNNLRKEFR 666
            NSKCSYDGQL+GLLGQY+V REEEVVTGHIWSMPKYS+KK G+LKERLKHAYN LRKEFR
Sbjct: 1041 NSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNTLRKEFR 1100

Query: 665  RVFEQIEPDFEFLADDEKNAIYEKKASAWYQVTYHPTWLQRSLELHHPDCVGETVMLSFA 486
             VFE+++PDF+ L DDEKN +YE+KASAWYQVTYHP W+ RSLEL  PD V  TVMLSFA
Sbjct: 1101 NVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYHPHWVARSLELQLPDAVSNTVMLSFA 1160

Query: 485  WIAVDYLAQIKIRRRGSWNLDSSKPIDSLGRYLADKI 375
            WIA DYLA+IKIR R     DS+KPI+SLGRYL D I
Sbjct: 1161 WIAADYLARIKIRHRRLQYSDSTKPINSLGRYLVDNI 1197


>ref|XP_010319120.1| PREDICTED: RNA-dependent RNA polymerase 6 isoform X1 [Solanum
            lycopersicum] gi|723688503|ref|XP_010319121.1| PREDICTED:
            RNA-dependent RNA polymerase 6 isoform X1 [Solanum
            lycopersicum]
          Length = 1197

 Score = 1498 bits (3878), Expect = 0.0
 Identities = 731/997 (73%), Positives = 840/997 (84%)
 Frame = -3

Query: 3365 EINAIRQYQDSSGFVILLQLASSPSIHYRTADDDIEVSVPFDLLDDDDPWIRTTDFTPSG 3186
            EIN I + +D S  V+LLQLASSP + YRTADDDIE SV FDLLDDDD WIRTTD T SG
Sbjct: 202  EINEINECKDFSSLVLLLQLASSPLVFYRTADDDIEESVAFDLLDDDDQWIRTTDITFSG 261

Query: 3185 AIGRCNMYRISIPPRKGAILKKALEYLKESRVYIQDISSAKKLLIKDEPDFGMTLSDPFF 3006
            AIGR N YR+SI PR G   KKA+ Y +ESRV + +    + L +++EPDFG ++S+PFF
Sbjct: 262  AIGRFNTYRVSIRPRNGPSFKKAMNYFRESRVPVVE-QGEQMLRVRNEPDFGESVSEPFF 320

Query: 3005 CIQHKQGITFGVLFLVNAIMHKGIINQHQMSDMFFDLLRLESEEVNLAALKHIYSYKRPL 2826
            C Q+ +GI+F VLFLVNA++HKGI+NQHQM+  FF LLR   E VNLAALKHI+SYKRP+
Sbjct: 321  CFQNHEGISFKVLFLVNAVLHKGIVNQHQMTAEFFSLLRKHQEGVNLAALKHIFSYKRPV 380

Query: 2825 FDASRKLESVQQRLHNNPKLTERPKQLEDIVEVRRLIITPSKAYCLPPEVELSNRVLRHY 2646
             DA RKL SVQ+ L NNP L ER  QL+D+VEVRRL+ITP+KAYCLPP VELSNRVLR Y
Sbjct: 381  NDAIRKLASVQKWLFNNPNLLERTGQLDDVVEVRRLVITPTKAYCLPPTVELSNRVLRKY 440

Query: 2645 RDVADRFLRVTFMDEGMRTLNKNVLNSYAASIVRDVTSYSNPQRTTMFKRVKNILNKGFY 2466
            + ++DRFLRVTFMDEGMR LN+N L  YAA+IVR++TS SNPQRT +F+RVK I+NKGFY
Sbjct: 441  KHISDRFLRVTFMDEGMRNLNRNALTYYAANIVREITSSSNPQRTGIFQRVKIIVNKGFY 500

Query: 2465 ICGRKYCFLAFSANQLRDCSAWFFAEHKNVRVANIISWMGRFTNRNVAKCAARMGQCFSS 2286
            +CGR+Y FLAFSANQLRD SAWFFAE   +RV +II+WMG+F NRNVAKCAARMGQCFSS
Sbjct: 501  LCGRRYSFLAFSANQLRDRSAWFFAETPEIRVTSIINWMGKFGNRNVAKCAARMGQCFSS 560

Query: 2285 TYATVEVPLSQVDLQLPDIKRNNFVFSDGIGMMTSGLAAEVAARLRLTQNPPCAYQIRYA 2106
            TYATVEV  S+V+ +LPDI+RN +VFSDGIGMMT+ L+ EVAA+L+L+ NPPCAYQIRYA
Sbjct: 561  TYATVEVLPSEVNSELPDIERNGYVFSDGIGMMTADLSIEVAAKLQLSVNPPCAYQIRYA 620

Query: 2105 GCKGVIACWPSKTNGHRLYLRPSMQKFESSHTILEICSWTRFQPGFLNRQIITLLSALDV 1926
            GCKGV+ACWP++ +G RL LRPSM+KF+S+HTILEICSWTR QPGFLNRQIITLLS+L+V
Sbjct: 621  GCKGVVACWPAEKDGIRLSLRPSMKKFDSNHTILEICSWTRLQPGFLNRQIITLLSSLEV 680

Query: 1925 RDNIFWEMQESMMLRLNLMLEDTDVAFDVITASCAEQGNTAAIMLSAGFNPKTEPHLRGM 1746
            +D +FWEMQ+ M+ +L+ +L D+DVAFDVITASCAE GNTAAIMLSAGF P++EPHLRGM
Sbjct: 681  KDEMFWEMQKEMLSKLDKILVDSDVAFDVITASCAEAGNTAAIMLSAGFKPQSEPHLRGM 740

Query: 1745 LTSVRAAQLRDLRERARIFVPSGRWLMGCLDELAVLEQGQCFIQVSGPCLENCFSHHGSK 1566
            L S+RAAQL DLR + R+FV SGRWLMGCLDEL  LEQGQCFIQVS P LE CF  HG +
Sbjct: 741  LASIRAAQLGDLRNKTRMFVTSGRWLMGCLDELGELEQGQCFIQVSSPSLETCFVKHGPE 800

Query: 1565 FSETQKNLQVIKGLVAIAKNPCLHPGDVRILEAVDAPELQHLSDCLVFPQKGDRPHTNEA 1386
            FSE +KNLQV+KGLV IAKNPCLHPGDVRILEAVD P L HL DCLVFPQKGDRPH+NEA
Sbjct: 801  FSEIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGLHHLYDCLVFPQKGDRPHSNEA 860

Query: 1385 SGSDLDGDLYFVTWDSNLIPPSKTSWMPMDYAPVEAKSLPREVKHPDIIDFFSKNMVTES 1206
            SGSDLDGDLYFVTWD NLIPPSK SWMPM YAP EAK L R+V+H DIIDFF KNMV ES
Sbjct: 861  SGSDLDGDLYFVTWDENLIPPSKKSWMPMAYAPAEAKQLGRQVQHTDIIDFFLKNMVQES 920

Query: 1205 LGTICNAHVVHADLSEYGALDEKCIKLAEMAAIAVDFPKTGKIVTMPFEYKPKMYPDFMG 1026
            LG ICNAHVVHADLSE+GA+DEKC+KLAE+AA+AVDFPKTGK+VTMPF+ KPKMYPDFMG
Sbjct: 921  LGEICNAHVVHADLSEFGAMDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMG 980

Query: 1025 KEDFQSYKSKKILGKLYRQVKDAYDEGEAATSDLIFSLNKIPYDTDLEIPGSEQFIKHAW 846
            KE FQSY+SKKILGKLYRQV D YD     +S L +    IPYDT+LEIPG E FI  AW
Sbjct: 981  KEPFQSYESKKILGKLYRQVIDVYDAEGGESSGLEYVPKDIPYDTNLEIPGYEDFIDDAW 1040

Query: 845  NSKCSYDGQLNGLLGQYRVTREEEVVTGHIWSMPKYSSKKLGDLKERLKHAYNNLRKEFR 666
            N KCSYDGQLNGLLGQY+V  EEEVVTGHIWSMPKYS+KK G+LKERLKHAYN LRKEFR
Sbjct: 1041 NHKCSYDGQLNGLLGQYKVNGEEEVVTGHIWSMPKYSAKKQGELKERLKHAYNMLRKEFR 1100

Query: 665  RVFEQIEPDFEFLADDEKNAIYEKKASAWYQVTYHPTWLQRSLELHHPDCVGETVMLSFA 486
             VFEQ+EPDF+ L  DEKN +YE+KA AWY+VTYHP W+ RSLEL  PD V   VMLSFA
Sbjct: 1101 NVFEQMEPDFDLLPIDEKNDMYERKAFAWYRVTYHPHWVTRSLELQLPDAVSNGVMLSFA 1160

Query: 485  WIAVDYLAQIKIRRRGSWNLDSSKPIDSLGRYLADKI 375
            WIA DY+A+IKIR+RG  N DS+KPIDSLGRYL +KI
Sbjct: 1161 WIAADYIARIKIRQRGMQNFDSTKPIDSLGRYLVNKI 1197


>ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lycopersicum]
            gi|397529811|gb|AFO53516.1| RNA-dependent RNA polymerase
            6 [Solanum lycopersicum]
          Length = 1197

 Score = 1498 bits (3878), Expect = 0.0
 Identities = 731/997 (73%), Positives = 840/997 (84%)
 Frame = -3

Query: 3365 EINAIRQYQDSSGFVILLQLASSPSIHYRTADDDIEVSVPFDLLDDDDPWIRTTDFTPSG 3186
            EIN I + +D S  V+LLQLASSP + YRTADDDIE SV FDLLDDDD WIRTTD T SG
Sbjct: 202  EINEINECKDFSSLVLLLQLASSPLVFYRTADDDIEESVAFDLLDDDDQWIRTTDITFSG 261

Query: 3185 AIGRCNMYRISIPPRKGAILKKALEYLKESRVYIQDISSAKKLLIKDEPDFGMTLSDPFF 3006
            AIGR N YR+SI PR G   KKA+ Y +ESRV + +    + L +++EPDFG ++S+PFF
Sbjct: 262  AIGRFNTYRVSIRPRNGPSFKKAMNYFRESRVPVVE-QGEQMLRVRNEPDFGESVSEPFF 320

Query: 3005 CIQHKQGITFGVLFLVNAIMHKGIINQHQMSDMFFDLLRLESEEVNLAALKHIYSYKRPL 2826
            C Q+ +GI+F VLFLVNA++HKGI+NQHQM+  FF LLR   E VNLAALKHI+SYKRP+
Sbjct: 321  CFQNHEGISFKVLFLVNAVLHKGIVNQHQMTAEFFSLLRKHQEGVNLAALKHIFSYKRPV 380

Query: 2825 FDASRKLESVQQRLHNNPKLTERPKQLEDIVEVRRLIITPSKAYCLPPEVELSNRVLRHY 2646
             DA RKL SVQ+ L NNP L ER  QL+D+VEVRRL+ITP+KAYCLPP VELSNRVLR Y
Sbjct: 381  NDAIRKLASVQKWLFNNPNLLERTGQLDDVVEVRRLVITPTKAYCLPPTVELSNRVLRKY 440

Query: 2645 RDVADRFLRVTFMDEGMRTLNKNVLNSYAASIVRDVTSYSNPQRTTMFKRVKNILNKGFY 2466
            + ++DRFLRVTFMDEGMR LN+N L  YAA+IVR++TS SNPQRT +F+RVK I+NKGFY
Sbjct: 441  KHISDRFLRVTFMDEGMRNLNRNALTYYAANIVREITSSSNPQRTGIFQRVKIIVNKGFY 500

Query: 2465 ICGRKYCFLAFSANQLRDCSAWFFAEHKNVRVANIISWMGRFTNRNVAKCAARMGQCFSS 2286
            +CGR+Y FLAFSANQLRD SAWFFAE   +RV +II+WMG+F NRNVAKCAARMGQCFSS
Sbjct: 501  LCGRRYSFLAFSANQLRDRSAWFFAETPEIRVTSIINWMGKFGNRNVAKCAARMGQCFSS 560

Query: 2285 TYATVEVPLSQVDLQLPDIKRNNFVFSDGIGMMTSGLAAEVAARLRLTQNPPCAYQIRYA 2106
            TYATVEV  S+V+ +LPDI+RN +VFSDGIGMMT+ L+ EVAA+L+L+ NPPCAYQIRYA
Sbjct: 561  TYATVEVLPSEVNSELPDIERNGYVFSDGIGMMTADLSIEVAAKLQLSVNPPCAYQIRYA 620

Query: 2105 GCKGVIACWPSKTNGHRLYLRPSMQKFESSHTILEICSWTRFQPGFLNRQIITLLSALDV 1926
            GCKGV+ACWP++ +G RL LRPSM+KF+S+HTILEICSWTR QPGFLNRQIITLLS+L+V
Sbjct: 621  GCKGVVACWPAEKDGIRLSLRPSMKKFDSNHTILEICSWTRLQPGFLNRQIITLLSSLEV 680

Query: 1925 RDNIFWEMQESMMLRLNLMLEDTDVAFDVITASCAEQGNTAAIMLSAGFNPKTEPHLRGM 1746
            +D +FWEMQ+ M+ +L+ +L D+DVAFDVITASCAE GNTAAIMLSAGF P++EPHLRGM
Sbjct: 681  KDEMFWEMQKEMLSKLDKILVDSDVAFDVITASCAEAGNTAAIMLSAGFKPQSEPHLRGM 740

Query: 1745 LTSVRAAQLRDLRERARIFVPSGRWLMGCLDELAVLEQGQCFIQVSGPCLENCFSHHGSK 1566
            L S+RAAQL DLR + R+FV SGRWLMGCLDEL  LEQGQCFIQVS P LE CF  HG +
Sbjct: 741  LASIRAAQLGDLRNKTRMFVTSGRWLMGCLDELGELEQGQCFIQVSSPSLETCFVKHGPE 800

Query: 1565 FSETQKNLQVIKGLVAIAKNPCLHPGDVRILEAVDAPELQHLSDCLVFPQKGDRPHTNEA 1386
            FSE +KNLQV+KGLV IAKNPCLHPGDVRILEAVD P L HL DCLVFPQKGDRPH+NEA
Sbjct: 801  FSEIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGLHHLYDCLVFPQKGDRPHSNEA 860

Query: 1385 SGSDLDGDLYFVTWDSNLIPPSKTSWMPMDYAPVEAKSLPREVKHPDIIDFFSKNMVTES 1206
            SGSDLDGDLYFVTWD NLIPPSK SWMPM YAP EAK L R+V+H DIIDFF KNMV ES
Sbjct: 861  SGSDLDGDLYFVTWDENLIPPSKKSWMPMAYAPAEAKQLGRQVQHTDIIDFFLKNMVQES 920

Query: 1205 LGTICNAHVVHADLSEYGALDEKCIKLAEMAAIAVDFPKTGKIVTMPFEYKPKMYPDFMG 1026
            LG ICNAHVVHADLSE+GA+DEKC+KLAE+AA+AVDFPKTGK+VTMPF+ KPKMYPDFMG
Sbjct: 921  LGEICNAHVVHADLSEFGAMDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMG 980

Query: 1025 KEDFQSYKSKKILGKLYRQVKDAYDEGEAATSDLIFSLNKIPYDTDLEIPGSEQFIKHAW 846
            KE FQSY+SKKILGKLYRQV D YD     +S L +    IPYDT+LEIPG E FI  AW
Sbjct: 981  KEPFQSYESKKILGKLYRQVIDVYDAEGGESSGLEYVPKDIPYDTNLEIPGYEDFIDDAW 1040

Query: 845  NSKCSYDGQLNGLLGQYRVTREEEVVTGHIWSMPKYSSKKLGDLKERLKHAYNNLRKEFR 666
            N KCSYDGQLNGLLGQY+V  EEEVVTGHIWSMPKYS+KK G+LKERLKHAYN LRKEFR
Sbjct: 1041 NHKCSYDGQLNGLLGQYKVNGEEEVVTGHIWSMPKYSAKKQGELKERLKHAYNMLRKEFR 1100

Query: 665  RVFEQIEPDFEFLADDEKNAIYEKKASAWYQVTYHPTWLQRSLELHHPDCVGETVMLSFA 486
             VFEQ+EPDF+ L  DEKN +YE+KA AWY+VTYHP W+ RSLEL  PD V   VMLSFA
Sbjct: 1101 NVFEQMEPDFDLLPIDEKNDMYERKAFAWYRVTYHPHWVTRSLELQLPDAVSNGVMLSFA 1160

Query: 485  WIAVDYLAQIKIRRRGSWNLDSSKPIDSLGRYLADKI 375
            WIA DY+A+IKIR+RG  N DS+KPIDSLGRYL +KI
Sbjct: 1161 WIAADYIARIKIRQRGMQNFDSTKPIDSLGRYLVNKI 1197


>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
            gi|731385864|ref|XP_010648660.1| PREDICTED: RNA-dependent
            RNA polymerase 6 [Vitis vinifera]
            gi|731385866|ref|XP_010648661.1| PREDICTED: RNA-dependent
            RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score = 1485 bits (3844), Expect = 0.0
 Identities = 725/998 (72%), Positives = 843/998 (84%), Gaps = 1/998 (0%)
 Frame = -3

Query: 3365 EINAIRQYQDSSGFVILLQLASSPSIHYRTADDDIEVSVPFDLLDDDDPWIRTTDFTPSG 3186
            EIN +RQ +D S  ++LLQL+SSP ++YRTADDDIE +VPFDLLDDDDPWIRTTDFT SG
Sbjct: 203  EINEVRQRRDMSSLILLLQLSSSPFVYYRTADDDIEETVPFDLLDDDDPWIRTTDFTVSG 262

Query: 3185 AIGRCNMYRISIPPRKGAILKKALEYLKESRVYIQDISSAKKLLIKDEPDFGMTLSDPFF 3006
            AIGRCN YRISIPPR GA LKKA++YL+  RV + + S   +L ++DEPDFG+ +SDPFF
Sbjct: 263  AIGRCNSYRISIPPRYGAKLKKAMDYLRARRVNVLEDSPKWQLRVRDEPDFGLPMSDPFF 322

Query: 3005 CIQHKQGITFGVLFLVNAIMHKGIINQHQMSDMFFDLLRLESEEVNLAALKHIYSYKRPL 2826
            CIQHK+GI F V+FLVNA+MHKGIINQHQ+SD FFDLLR + +++N+AALKHI SY+ P+
Sbjct: 323  CIQHKEGIDFRVMFLVNAVMHKGIINQHQLSDKFFDLLRSQQKDINIAALKHICSYRHPV 382

Query: 2825 FDASRKLESVQQRLHNNPKLTERPKQLEDIVEVRRLIITPSKAYCLPPEVELSNRVLRHY 2646
            FDA ++L+ V + L  NPKL + PK+L+DIVEVRRL+ITPSKAYCLPPEVELSNRVLR+Y
Sbjct: 383  FDAYQRLKLVHKWLLKNPKLLKSPKELDDIVEVRRLVITPSKAYCLPPEVELSNRVLRNY 442

Query: 2645 RDVADRFLRVTFMDEGMRTLNKNVLNSYAASIVRDVTSYSNPQRTTMFKRVKNILNKGFY 2466
            ++V+DRFLRVTFMDEGM+T+N NVLN Y A IV+ +TS S PQ+T +FKRVK IL  GFY
Sbjct: 443  KEVSDRFLRVTFMDEGMQTINANVLNYYVAPIVKVITSNSFPQKTRVFKRVKTILTDGFY 502

Query: 2465 ICGRKYCFLAFSANQLRDCSAWFFAEHKNVRVANIISWMGRFTNRNVAKCAARMGQCFSS 2286
            +CGRKY FLAFS+NQLRD SAWFFAE K   V  I SWMG+FTNRNVAKCAARMGQCFSS
Sbjct: 503  LCGRKYSFLAFSSNQLRDRSAWFFAEDKKTSVRAIKSWMGKFTNRNVAKCAARMGQCFSS 562

Query: 2285 TYATVEVPLSQVDLQLPDIKRNNFVFSDGIGMMTSGLAAEVAARLRLTQNPPCAYQIRYA 2106
            TYATVEVP  +V  +LPDIKRN + FSDGIG +   LA EVA +L+L +  P AYQIRYA
Sbjct: 563  TYATVEVPSWEVK-ELPDIKRNGYDFSDGIGKIVPDLAMEVAEKLKL-EGTPSAYQIRYA 620

Query: 2105 GCKGVIACWPSKTNGHRLYLRPSMQKFESSHTILEICSWTRFQPGFLNRQIITLLSALDV 1926
            GCKGV+ACWPS  +G RL  RPSM KF S HTILEICSWTRFQPGFLNRQI+TLLSAL+V
Sbjct: 621  GCKGVVACWPSDNDGIRLSWRPSMNKFLSDHTILEICSWTRFQPGFLNRQIVTLLSALNV 680

Query: 1925 RDNIFWEMQESMMLRLNLMLEDTDVAFDVITASCAEQGNTAAIMLSAGFNPKTEPHLRGM 1746
             D IFW+MQESM+ +LN ML DTDVAFDV+ ASCAEQGNTAAIMLSAGF P+TEPHL+GM
Sbjct: 681  PDKIFWKMQESMISKLNQMLTDTDVAFDVLIASCAEQGNTAAIMLSAGFKPQTEPHLQGM 740

Query: 1745 LTSVRAAQLRDLRERARIFVPSGRWLMGCLDELAVLEQGQCFIQVSGPCLENCFSHHGSK 1566
            LT +RAAQ   LRE+ARIFVPSGRWLMGCLDEL VLEQGQCFIQVS P LENCF  HGS+
Sbjct: 741  LTCIRAAQFWGLREKARIFVPSGRWLMGCLDELGVLEQGQCFIQVSSPSLENCFLKHGSR 800

Query: 1565 FSETQKNLQVIKGLVAIAKNPCLHPGDVRILEAVDAPELQHLSDCLVFPQKGDRPHTNEA 1386
            FS  QKNL+VIKG+VAIAKNPCLHPGDVRILEAVDAP L+HL DCLVFPQKGDRPH+NEA
Sbjct: 801  FS-AQKNLKVIKGIVAIAKNPCLHPGDVRILEAVDAPGLEHLVDCLVFPQKGDRPHSNEA 859

Query: 1385 SGSDLDGDLYFVTWDSNLIPPSKTSWMPMDYAPVEAKSLPREVKHPDIIDFFSKNMVTES 1206
            SGSDLDGDLYFVTW+  LIPPSK SW PM Y   EAK+L REV   DIIDFF+KNMV E+
Sbjct: 860  SGSDLDGDLYFVTWEETLIPPSKQSWPPMQYDSAEAKALAREVTSLDIIDFFTKNMVNEN 919

Query: 1205 LGTICNAHVVHADLSEYGALDEKCIKLAEMAAIAVDFPKTGKIVTMPFEYKPKMYPDFMG 1026
            LG ICNAHVVHAD SEYGALDE C+ LAE AA AVDFPKTGK+VT+P   KPKMYPDFMG
Sbjct: 920  LGAICNAHVVHADRSEYGALDEACLDLAERAATAVDFPKTGKLVTLPPYLKPKMYPDFMG 979

Query: 1025 KEDFQSYKSKKILGKLYRQVKDAYDEGEAATSDLIFSLNKIPYDTDLEIPGSEQFIKHAW 846
            KE+FQ+Y+S KILGK+YRQ+KDAY+E  + +S+ IF  +K+P+D DL IPGS  FI  AW
Sbjct: 980  KEEFQTYRSNKILGKMYRQIKDAYNEDVSESSEQIFGADKVPFDEDLGIPGSADFINDAW 1039

Query: 845  NSKCSYDGQLNGLLGQYRVTREEEVVTGHIWSMPKYSSKKLGDLKERLKHAYNNLRKEFR 666
              KCSYDGQLNGLLGQY+V REEEVVTGH+WSMPKY S+K G+L ERLKHAY++L+KEFR
Sbjct: 1040 IHKCSYDGQLNGLLGQYKVKREEEVVTGHVWSMPKYKSRKQGELTERLKHAYSSLKKEFR 1099

Query: 665  RVFEQIEPDFEFLADDEKNAIYEKKASAWYQVTYHPTWLQRSLELHHPDCV-GETVMLSF 489
            ++FE++  DF+ L DDEKN +YE+KASAWYQVTYHPTW+++SLEL +PD V GE VMLSF
Sbjct: 1100 QIFEKMNSDFDQLTDDEKNRLYEQKASAWYQVTYHPTWVKKSLELQNPDEVFGERVMLSF 1159

Query: 488  AWIAVDYLAQIKIRRRGSWNLDSSKPIDSLGRYLADKI 375
            AWI  DYLA+IKIRR+G+ N+DSSKPI+SL R+L D+I
Sbjct: 1160 AWITADYLARIKIRRKGTGNVDSSKPINSLARFLVDRI 1197


>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1198

 Score = 1481 bits (3833), Expect = 0.0
 Identities = 716/998 (71%), Positives = 840/998 (84%), Gaps = 1/998 (0%)
 Frame = -3

Query: 3365 EINAIRQYQDSSGFVILLQLASSPSIHYRTADDDIEVSVPFDLLDDDDPWIRTTDFTPSG 3186
            +IN I+QY ++S  V+LLQLAS+P + YRTADDDIEVSVPFDLLDDDDPWIRTTDFT SG
Sbjct: 203  DINEIKQYTETSCLVLLLQLASAPRVWYRTADDDIEVSVPFDLLDDDDPWIRTTDFTASG 262

Query: 3185 AIGRCNMYRISIPPRKGAILKKALEYLKESRVYIQDISSAKKLLIKDEPDFGMTLSDPFF 3006
            AIGRC+ YR+SIPPR G  L+KA+++LKE RV  Q+    + + I+DEPDFGM ++DPFF
Sbjct: 263  AIGRCHSYRVSIPPRHGPKLRKAVDFLKERRV--QEEYLRRPIRIRDEPDFGMPMTDPFF 320

Query: 3005 CIQHKQGITFGVLFLVNAIMHKGIINQHQMSDMFFDLLRLESEEVNLAALKHIYSYKRPL 2826
            CI HK+GI F VLFLVNA+MHKGI NQHQ+S+ FFDLLR +  EVN+AALKHIY Y+RP+
Sbjct: 321  CIHHKEGIAFDVLFLVNAVMHKGIFNQHQLSNDFFDLLRNQPTEVNVAALKHIYPYRRPV 380

Query: 2825 FDASRKLESVQQRLHNNPKLTERPKQLEDIVEVRRLIITPSKAYCLPPEVELSNRVLRHY 2646
            FDA +KL+  Q+ L  NPK  +  K+L+DI E+RRL+ITP+KAYCLPPEVELSNRVLR Y
Sbjct: 381  FDAYKKLKVAQEWLLKNPKFFKNQKKLDDIAEIRRLVITPTKAYCLPPEVELSNRVLRKY 440

Query: 2645 RDVADRFLRVTFMDEGMRTLNKNVLNSYAASIVRDVTSYSNPQRTTMFKRVKNILNKGFY 2466
            +DVADRFLRVTFMDEG++T+N N LN +AA IVR +TSYS PQ+T +FKRV++IL +GFY
Sbjct: 441  KDVADRFLRVTFMDEGLQTMNSNALNYFAAPIVRAITSYSFPQKTRIFKRVRSILTEGFY 500

Query: 2465 ICGRKYCFLAFSANQLRDCSAWFFAEHKNVRVANIISWMGRFTNRNVAKCAARMGQCFSS 2286
            +CGR+Y FLAFS+NQLRD SAWFFAE +N+ V  I SWMG+FTN+N+AKCAARMGQCFSS
Sbjct: 501  LCGRRYSFLAFSSNQLRDRSAWFFAEDRNINVMAIKSWMGKFTNKNIAKCAARMGQCFSS 560

Query: 2285 TYATVEVPLSQVDLQLPDIKRNNFVFSDGIGMMTSGLAAEVAARLRLTQNPPCAYQIRYA 2106
            TYAT+EVP  +V+  LPDIKRN + FSDGIGM+T  LA EVA +L+   +PPCAYQIRYA
Sbjct: 561  TYATIEVPPEEVNSDLPDIKRNGYDFSDGIGMITPDLAREVAEKLKFDFDPPCAYQIRYA 620

Query: 2105 GCKGVIACWPSKTNGHRLYLRPSMQKFESSHTILEICSWTRFQPGFLNRQIITLLSALDV 1926
            GCKGV+ACWP + +G RL LR SM KF+S+HTILEICSWTRFQPGFLNRQIITLLSAL+V
Sbjct: 621  GCKGVVACWPEQGDGIRLSLRSSMNKFQSNHTILEICSWTRFQPGFLNRQIITLLSALNV 680

Query: 1925 RDNIFWEMQESMMLRLNLMLEDTDVAFDVITASCAEQGNTAAIMLSAGFNPKTEPHLRGM 1746
             D +FW+MQE M+ +LN ML D+DVAFDV+TASCAEQGN AAIMLSAGF P+ EPHLRGM
Sbjct: 681  PDAVFWKMQELMVSKLNQMLVDSDVAFDVLTASCAEQGNVAAIMLSAGFKPQKEPHLRGM 740

Query: 1745 LTSVRAAQLRDLRERARIFVPSGRWLMGCLDELAVLEQGQCFIQVSGPCLENCFSHHGSK 1566
            LT VRAAQL  LRE+ARIFVPSGRWLMGCLDEL VLEQGQCFIQVS   LENCF  HGSK
Sbjct: 741  LTCVRAAQLWGLREKARIFVPSGRWLMGCLDELGVLEQGQCFIQVSNSYLENCFVKHGSK 800

Query: 1565 FSETQKNLQVIKGLVAIAKNPCLHPGDVRILEAVDAPELQHLSDCLVFPQKGDRPHTNEA 1386
            FSET+KNLQV+KG V IAKNPCLHPGD+RILEAVDAP L HL DCLVFPQKG+RPH NEA
Sbjct: 801  FSETKKNLQVVKGTVVIAKNPCLHPGDIRILEAVDAPGLHHLYDCLVFPQKGERPHANEA 860

Query: 1385 SGSDLDGDLYFVTWDSNLIPPSKTSWMPMDYAPVEAKSLPREVKHPDIIDFFSKNMVTES 1206
            SGSDLDGDLYFVTWD NLIPPSK SW+PM Y   EAK L R V H DI++FF+KNM  E+
Sbjct: 861  SGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAKQLTRPVNHQDIVEFFAKNMANEN 920

Query: 1205 LGTICNAHVVHADLSEYGALDEKCIKLAEMAAIAVDFPKTGKIVTMPFEYKPKMYPDFMG 1026
            LG ICNAHVV ADLSEYGALDEKC+ LAE+AA AVDFPKTGKIV+MP + KPK+YPDFMG
Sbjct: 921  LGAICNAHVVRADLSEYGALDEKCLTLAELAATAVDFPKTGKIVSMPSDLKPKIYPDFMG 980

Query: 1025 KEDFQSYKSKKILGKLYRQVKDAYDEGE-AATSDLIFSLNKIPYDTDLEIPGSEQFIKHA 849
            KE+ QSYKSKKILG+LYRQ+KDAYD+ + AA+S+L F    IPYD DLE+ G+  FI  A
Sbjct: 981  KEEHQSYKSKKILGRLYRQIKDAYDDDDVAASSELNFVRGDIPYDLDLEVLGATDFISDA 1040

Query: 848  WNSKCSYDGQLNGLLGQYRVTREEEVVTGHIWSMPKYSSKKLGDLKERLKHAYNNLRKEF 669
            W+ KCSYDGQLNGLL QY+V REEEVVTGH+WSMPK SS+K GDLKERLKH+YN L++EF
Sbjct: 1041 WDRKCSYDGQLNGLLAQYKVKREEEVVTGHVWSMPKGSSRKQGDLKERLKHSYNCLKREF 1100

Query: 668  RRVFEQIEPDFEFLADDEKNAIYEKKASAWYQVTYHPTWLQRSLELHHPDCVGETVMLSF 489
            R+VFE+++ DF  L DDEKN +YE+KASAWYQVTYHP W+Q+SLEL   D  G +VMLSF
Sbjct: 1101 RQVFEKMDLDFGQLDDDEKNMLYERKASAWYQVTYHPHWIQKSLELQDSDGAGISVMLSF 1160

Query: 488  AWIAVDYLAQIKIRRRGSWNLDSSKPIDSLGRYLADKI 375
            AWIA DYLA+IKIR     N+DS+KP++SL +YLAD++
Sbjct: 1161 AWIAADYLARIKIRHSRIGNVDSAKPVNSLAKYLADRM 1198


>ref|XP_012857917.1| PREDICTED: RNA-dependent RNA polymerase 6 [Erythranthe guttatus]
            gi|604300451|gb|EYU20269.1| hypothetical protein
            MIMGU_mgv1a000386mg [Erythranthe guttata]
          Length = 1196

 Score = 1480 bits (3831), Expect = 0.0
 Identities = 722/999 (72%), Positives = 843/999 (84%), Gaps = 2/999 (0%)
 Frame = -3

Query: 3365 EINAIRQYQDSSGFVILLQLASSPSIHYRTADDDIEVSVPFDLLDDDDPWIRTTDFTPSG 3186
            EI  I+ Y+D S  +IL+QLASSP I+YRTADDDIE     DLLDDDDPWIRTTDFT  G
Sbjct: 202  EIIEIKHYRDFSSLIILIQLASSPLIYYRTADDDIEEPATCDLLDDDDPWIRTTDFTSGG 261

Query: 3185 AIGRCNMYRISIPPRKGAILKKALEYLKESRVYIQDISSAKKLLIKDEPDFGMTLSDPFF 3006
            A GRCN YRIS+ P  G  L KAL+YL++ RV + D  + ++L+++DEPDFGM + DPF 
Sbjct: 262  AFGRCNTYRISVRPHNGPHLLKALDYLRKRRVPVLDERTRQRLVVQDEPDFGMPVLDPFL 321

Query: 3005 CIQHKQGITFGVLFLVNAIMHKGIINQHQMSDMFFDLLRLESEEVNLAALKHIYSYKRPL 2826
            CIQ+K+GI+F V+FL+NA+MHKGIINQHQ+S+   D+ R + E+VN  ALKH+ SYKRP+
Sbjct: 322  CIQYKEGISFKVMFLLNAVMHKGIINQHQISEQLLDMFRRQPEDVNTVALKHMCSYKRPV 381

Query: 2825 FDASRKLESVQQRLHNNPKLTERPKQLEDIVEVRRLIITPSKAYCLPPEVELSNRVLRHY 2646
            +DA + +E+VQ+ L  NPKL ERP+ ++DIVEVRRLIITP+KAYCLPPEVELSNRVLRHY
Sbjct: 382  YDAFKAVETVQRWLLKNPKLLERPRGMDDIVEVRRLIITPAKAYCLPPEVELSNRVLRHY 441

Query: 2645 RDVADRFLRVTFMDEGMRTLNKNVLNSYAASIVRDVTSYSNPQRTTMFKRVKNILNKGFY 2466
            + VADRFLRVTF DE M TLNKN L  Y   +VR +TS SNPQRTT+FKR+K+IL+ GFY
Sbjct: 442  KAVADRFLRVTFTDEAMSTLNKNALTYYVGPMVRGITSSSNPQRTTIFKRIKDILHSGFY 501

Query: 2465 ICGRKYCFLAFSANQLRDCSAWFFAEHKNVRVANIISWMGRFTNRNVAKCAARMGQCFSS 2286
            +CGRKY FLAFS+NQLRD SAWFFAE K++ VANI +WMGRFTNRNVAKCAARMGQCFSS
Sbjct: 502  LCGRKYSFLAFSSNQLRDRSAWFFAEDKDIGVANIKNWMGRFTNRNVAKCAARMGQCFSS 561

Query: 2285 TYATVEVPLSQVDLQLPDIKRNNFVFSDGIGMMTSGLAAEVAARLRLTQNPPCAYQIRYA 2106
            TYATVEVP  QV+ +LPDI+RN++VFSDGIGM+++ LA EVA +L+LT N P AYQIRYA
Sbjct: 562  TYATVEVPSKQVNSKLPDIERNDYVFSDGIGMLSADLAMEVAEKLQLTTNLPSAYQIRYA 621

Query: 2105 GCKGVIACWPSKTNGHRLYLRPSMQKFESSHTILEICSWTRFQPGFLNRQIITLLSALDV 1926
            G KGV+ACWP++++G RL LR SM+KF+S+HT+LEICSWTRFQPGFLNRQIITLLSAL+V
Sbjct: 622  GYKGVVACWPAQSDGFRLSLRKSMKKFDSNHTVLEICSWTRFQPGFLNRQIITLLSALEV 681

Query: 1925 RDNIFWEMQESMMLRLNLMLEDTDVAFDVITASCAEQGNTAAIMLSAGFNPKTEPHLRGM 1746
             D IFW MQE+M+ RLN MLEDTD AFDV+T+SC +QGNTAAIMLSAGF P+TEPHLRGM
Sbjct: 682  GDEIFWRMQETMISRLNQMLEDTDTAFDVLTSSCTDQGNTAAIMLSAGFKPQTEPHLRGM 741

Query: 1745 LTSVRAAQLRDLRERARIFVPSGRWLMGCLDELAVLEQGQCFIQVSGPCLENCFSHHGSK 1566
            LTS+R AQL DLRERARIFVPSGRWLMGCLDEL VLE GQCFIQVS P LE+CF  HGS+
Sbjct: 742  LTSIRVAQLGDLRERARIFVPSGRWLMGCLDELGVLEHGQCFIQVSNPSLEDCFVKHGSE 801

Query: 1565 FSETQKNLQVIKGLVAIAKNPCLHPGDVRILEAVDAPELQHLSDCLVFPQKGDRPHTNEA 1386
            FS  +K L+VIKGLVAIAKNPCLHPGDVRILEAVD P L HL DCLVFPQKG+RPHTNEA
Sbjct: 802  FSGAKKKLEVIKGLVAIAKNPCLHPGDVRILEAVDCPGLHHLYDCLVFPQKGERPHTNEA 861

Query: 1385 SGSDLDGDLYFVTWDSNLIPPSKTSWMPMDYAPVEAKSLPREVKHPDIIDFFSKNMVTES 1206
            SGSDLDGDLYFVTWD NL+PPSK SW PM+YAP E K LPREVKH DII+FF+KNMV ES
Sbjct: 862  SGSDLDGDLYFVTWDENLMPPSKRSWTPMEYAPGEVKQLPREVKHTDIIEFFTKNMVNES 921

Query: 1205 LGTICNAHVVHADLSEYGALDEKCIKLAEMAAIAVDFPKTGKIVTMPFEYKPKMYPDFMG 1026
            LG ICNAHVVHAD SEYGALDEKCIKLAE+AAIAVDFPKTGKIVTMP E KPK+YPDFMG
Sbjct: 922  LGAICNAHVVHADSSEYGALDEKCIKLAELAAIAVDFPKTGKIVTMPAELKPKLYPDFMG 981

Query: 1025 KEDFQSYKSKKILGKLYRQVKDA-YDEGEAATSDLIFSLNKIPYDTDLEIPGSEQFIKHA 849
            K++FQ+YKS KILGKLYR++KD+ YD  E++ +  +     I YD +LEI GSE FI  A
Sbjct: 982  KDEFQTYKSSKILGKLYRKIKDSNYDYEESSENTSV----NIAYDQELEIAGSESFITDA 1037

Query: 848  WNSKCSYDGQLNGLLGQYRVTREEEVVTGHIWSMPKYSSKKLGDLKERLKHAYNNLRKEF 669
            WN KCSYDGQL GLLGQY+V  EEEVVTGHIWSMPKYSSKK G+LKERLKHAY+ LRK+F
Sbjct: 1038 WNCKCSYDGQLTGLLGQYKVNSEEEVVTGHIWSMPKYSSKKQGELKERLKHAYSTLRKDF 1097

Query: 668  RRVFEQIEPDFEFLADDEKNAIYEKKASAWYQVTYHPTWLQRSLELH-HPDCVGETVMLS 492
            R+VFE ++ +F+ L+DDEKN ++E+KASAWYQVTY+ +W+++S +L    D VG+TVMLS
Sbjct: 1098 RKVFESMDAEFDQLSDDEKNTMFERKASAWYQVTYNESWVKKSKDLQVVDDEVGKTVMLS 1157

Query: 491  FAWIAVDYLAQIKIRRRGSWNLDSSKPIDSLGRYLADKI 375
            FAWIA DYLA+IKIRRR   N  S KPIDSLGRYLADKI
Sbjct: 1158 FAWIAADYLARIKIRRRRMENAISMKPIDSLGRYLADKI 1196


>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1200

 Score = 1479 bits (3830), Expect = 0.0
 Identities = 706/998 (70%), Positives = 844/998 (84%), Gaps = 1/998 (0%)
 Frame = -3

Query: 3365 EINAIRQYQDSSGFVILLQLASSPSIHYRTADDDIEVSVPFDLLDDDDPWIRTTDFTPSG 3186
            +IN I QY ++S  V+LLQLAS+P + YRTADDDIE  VPFDLLDDDDPWIRTTDFT SG
Sbjct: 203  DINEIIQYTETSCLVLLLQLASAPWVWYRTADDDIEAWVPFDLLDDDDPWIRTTDFTASG 262

Query: 3185 AIGRCNMYRISIPPRKGAILKKALEYLKESRVYI-QDISSAKKLLIKDEPDFGMTLSDPF 3009
            AIGRC+ YR+SIPPR G+ L+KA++YLKE RV + Q+ +  +++ I DEPDFGM +SDPF
Sbjct: 263  AIGRCHSYRVSIPPRHGSKLRKAVKYLKERRVQVLQEENHRRRIRILDEPDFGMPMSDPF 322

Query: 3008 FCIQHKQGITFGVLFLVNAIMHKGIINQHQMSDMFFDLLRLESEEVNLAALKHIYSYKRP 2829
            FCI HK+GI F VLFLVNA+MHKGI NQHQ+S+ FFDLLR +  EVN++ALKHI +Y+RP
Sbjct: 323  FCIHHKEGIAFEVLFLVNAVMHKGIFNQHQLSNDFFDLLRNQHTEVNVSALKHICTYRRP 382

Query: 2828 LFDASRKLESVQQRLHNNPKLTERPKQLEDIVEVRRLIITPSKAYCLPPEVELSNRVLRH 2649
            +F+A R+L++VQ+ L  NP L + PKQL D+VE+RRL+ITP+KAYCLPPEVELSNRVLR 
Sbjct: 383  VFNAYRRLKAVQEWLLKNPNLFKNPKQLGDVVEIRRLVITPTKAYCLPPEVELSNRVLRK 442

Query: 2648 YRDVADRFLRVTFMDEGMRTLNKNVLNSYAASIVRDVTSYSNPQRTTMFKRVKNILNKGF 2469
            Y+DVADRFLRVTFMDEG++ +N NVLN Y A IVRD+TS S PQ+T +FKRV++IL +GF
Sbjct: 443  YKDVADRFLRVTFMDEGLQRMNSNVLNYYVAPIVRDITSNSFPQKTRIFKRVRSILTEGF 502

Query: 2468 YICGRKYCFLAFSANQLRDCSAWFFAEHKNVRVANIISWMGRFTNRNVAKCAARMGQCFS 2289
            Y+CGR+Y FLAFSANQLRD SAWFF+E +N+ V ++ SWMG+FTNRN+AKCAARMGQCFS
Sbjct: 503  YLCGRRYSFLAFSANQLRDQSAWFFSEERNISVLDVKSWMGKFTNRNIAKCAARMGQCFS 562

Query: 2288 STYATVEVPLSQVDLQLPDIKRNNFVFSDGIGMMTSGLAAEVAARLRLTQNPPCAYQIRY 2109
            STYAT+EVP  +V+  LPDI+RN +VFSDGIG++T  LA EVA +L+L  +PPCAYQIRY
Sbjct: 563  STYATIEVPPEEVNSDLPDIERNGYVFSDGIGIITPDLAREVAEKLKLDIDPPCAYQIRY 622

Query: 2108 AGCKGVIACWPSKTNGHRLYLRPSMQKFESSHTILEICSWTRFQPGFLNRQIITLLSALD 1929
            AGCKGV+ACWP K +G RL LRPSM KF+S+HT LEICSWTRFQPGFLNRQIITLLS L+
Sbjct: 623  AGCKGVVACWPGKGDGVRLSLRPSMNKFQSNHTTLEICSWTRFQPGFLNRQIITLLSTLN 682

Query: 1928 VRDNIFWEMQESMMLRLNLMLEDTDVAFDVITASCAEQGNTAAIMLSAGFNPKTEPHLRG 1749
            V D +FW+MQE+M+ +LN M  ++DVAFDV+TASCA+QGN AAIMLSAGF P  EPHLRG
Sbjct: 683  VPDAVFWKMQETMVSKLNQMFVNSDVAFDVLTASCADQGNVAAIMLSAGFKPDREPHLRG 742

Query: 1748 MLTSVRAAQLRDLRERARIFVPSGRWLMGCLDELAVLEQGQCFIQVSGPCLENCFSHHGS 1569
            MLT VRAAQL DLRE+ RIFVPSGRWLMGCLDEL +LEQGQCFIQVS   LE CF  HG+
Sbjct: 743  MLTCVRAAQLWDLREKTRIFVPSGRWLMGCLDELGMLEQGQCFIQVSNSSLEKCFMKHGA 802

Query: 1568 KFSETQKNLQVIKGLVAIAKNPCLHPGDVRILEAVDAPELQHLSDCLVFPQKGDRPHTNE 1389
            KFSE +KNLQVIKG V IAKNPCLHPGDVR+LEAVD P L HL DCLVFPQKG+RPHTNE
Sbjct: 803  KFSEAEKNLQVIKGTVVIAKNPCLHPGDVRVLEAVDVPGLHHLYDCLVFPQKGERPHTNE 862

Query: 1388 ASGSDLDGDLYFVTWDSNLIPPSKTSWMPMDYAPVEAKSLPREVKHPDIIDFFSKNMVTE 1209
            ASGSDLDGDLYFVTWD NLIPPSK SW+PM Y   EAK L R V H DII+FF+KNMV +
Sbjct: 863  ASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAKLLARPVNHQDIIEFFAKNMVND 922

Query: 1208 SLGTICNAHVVHADLSEYGALDEKCIKLAEMAAIAVDFPKTGKIVTMPFEYKPKMYPDFM 1029
            +LG ICNAHVVHADLSEYGA D+ C+ LAE+AA AVDFPKTGK+V+MP   KPKMYPDFM
Sbjct: 923  NLGAICNAHVVHADLSEYGATDKNCLTLAELAATAVDFPKTGKVVSMPPYLKPKMYPDFM 982

Query: 1028 GKEDFQSYKSKKILGKLYRQVKDAYDEGEAATSDLIFSLNKIPYDTDLEIPGSEQFIKHA 849
            GKE++QSYKS+KILG+LYRQ+KDAYDE  AA+S+L      IPYD+DLE+ G+  +I  A
Sbjct: 983  GKEEYQSYKSEKILGRLYRQIKDAYDEDVAASSELNLVPGDIPYDSDLEVVGASDYISDA 1042

Query: 848  WNSKCSYDGQLNGLLGQYRVTREEEVVTGHIWSMPKYSSKKLGDLKERLKHAYNNLRKEF 669
            W+ KCSYDGQLNGLL QY+V REEEVVTGHIWSMPKYSS+K G+LK+RLKH+YN+L+KEF
Sbjct: 1043 WDQKCSYDGQLNGLLSQYKVKREEEVVTGHIWSMPKYSSRKQGELKDRLKHSYNSLKKEF 1102

Query: 668  RRVFEQIEPDFEFLADDEKNAIYEKKASAWYQVTYHPTWLQRSLELHHPDCVGETVMLSF 489
            R++FE+++ +FE L D EKN +YE+KASAWYQV YHP W+++SLEL  PD  G +VMLSF
Sbjct: 1103 RQIFEKMDLEFEQLEDGEKNKLYEQKASAWYQVVYHPHWVKKSLELQDPDGAGTSVMLSF 1162

Query: 488  AWIAVDYLAQIKIRRRGSWNLDSSKPIDSLGRYLADKI 375
            AWIA DYLA+IKIR R + N+DS+KP++SL +YLAD++
Sbjct: 1163 AWIAADYLARIKIRHRETGNVDSAKPVNSLAKYLADRM 1200


>ref|XP_012071453.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Jatropha curcas]
            gi|643731347|gb|KDP38635.1| hypothetical protein
            JCGZ_03988 [Jatropha curcas]
          Length = 1198

 Score = 1478 bits (3825), Expect = 0.0
 Identities = 713/998 (71%), Positives = 836/998 (83%), Gaps = 1/998 (0%)
 Frame = -3

Query: 3365 EINAIRQYQDSSGFVILLQLASSPSIHYRTADDDIEVSVPFDLLDDDDPWIRTTDFTPSG 3186
            +IN I+QY+D+S  VILLQLAS+P + YRTADDDIEV VPF+LLDDDDPWIRTTDFTPSG
Sbjct: 203  DINEIKQYKDTSYLVILLQLASAPWVWYRTADDDIEVLVPFNLLDDDDPWIRTTDFTPSG 262

Query: 3185 AIGRCNMYRISIPPRKGAILKKALEYLKESRVYIQDISSAKKLLIKDEPDFGMTLSDPFF 3006
            AIGRCN YR+SIPPR GA L++A+ YLKE RV +  +    K+L  +EPD+GM +SDPFF
Sbjct: 263  AIGRCNSYRVSIPPRHGAKLERAINYLKERRVQVDSLRRPLKIL--NEPDYGMPMSDPFF 320

Query: 3005 CIQHKQGITFGVLFLVNAIMHKGIINQHQMSDMFFDLLRLESEEVNLAALKHIYSYKRPL 2826
            CI  K+GI F ++FLVNA+MHKGI NQHQ+SD FFDLLR +  ++N+AALKHI SYKRP+
Sbjct: 321  CIHRKEGIAFEIVFLVNAVMHKGIFNQHQLSDDFFDLLRNQPADINVAALKHICSYKRPV 380

Query: 2825 FDASRKLESVQQRLHNNPKLTERPKQLEDIVEVRRLIITPSKAYCLPPEVELSNRVLRHY 2646
            FDA R+L++VQ+ L  NPKL + PKQL+DIV++RRL ITP++AYCLPPE+ELSNRVLR Y
Sbjct: 381  FDAHRRLKAVQEWLLKNPKLFKCPKQLDDIVQIRRLAITPTRAYCLPPEIELSNRVLRKY 440

Query: 2645 RDVADRFLRVTFMDEGMRTLNKNVLNSYAASIVRDVTSYSNPQRTTMFKRVKNILNKGFY 2466
            ++ ADRFLRVTFMDEG++T+N N L  Y A IVRD+TS S  Q+T +FKRVK+IL  GFY
Sbjct: 441  KNFADRFLRVTFMDEGLQTINANTLTYYVAPIVRDITSTSFSQKTRIFKRVKSILTDGFY 500

Query: 2465 ICGRKYCFLAFSANQLRDCSAWFFAEHKNVRVANIISWMGRFTNRNVAKCAARMGQCFSS 2286
            +CGR+Y FLAFS+NQLRD SAWFFAE   +RV  I  WMG+FTN+N+AKCAARMGQCFSS
Sbjct: 501  LCGRRYSFLAFSSNQLRDRSAWFFAEDGKIRVDQIRKWMGKFTNKNIAKCAARMGQCFSS 560

Query: 2285 TYATVEVPLSQVDLQLPDIKRNNFVFSDGIGMMTSGLAAEVAARLRLTQNPPCAYQIRYA 2106
            TYATVEVP ++V+L  PDI+RN + FSDGIGM+T  LA  VA +L+L  NPPCAYQIRYA
Sbjct: 561  TYATVEVPSAEVNLAHPDIERNGYTFSDGIGMITPDLAKAVAEKLKLDINPPCAYQIRYA 620

Query: 2105 GCKGVIACWPSKTNGHRLYLRPSMQKFESSHTILEICSWTRFQPGFLNRQIITLLSALDV 1926
            GCKGV+ACWP++ +G RL LRPSM KF+S+HT LEICSWTRFQPGFLNRQIITLLS L+V
Sbjct: 621  GCKGVVACWPAQGDGIRLSLRPSMNKFQSNHTTLEICSWTRFQPGFLNRQIITLLSTLNV 680

Query: 1925 RDNIFWEMQESMMLRLNLMLEDTDVAFDVITASCAEQGNTAAIMLSAGFNPKTEPHLRGM 1746
             D IFW+MQ +M+ +LN ML D DVAFDVITASC EQGNTAA+MLSAGF P+ EPHLRGM
Sbjct: 681  SDEIFWKMQIAMVSKLNKMLTDADVAFDVITASCTEQGNTAALMLSAGFKPQNEPHLRGM 740

Query: 1745 LTSVRAAQLRDLRERARIFVPSGRWLMGCLDELAVLEQGQCFIQVSGPCLENCFSHHGSK 1566
            LT +RAAQ  DLRE+ARIFV SGRWLMGCLDEL VLEQGQCFIQVS P LE CFS HGS+
Sbjct: 741  LTCIRAAQFCDLREKARIFVSSGRWLMGCLDELGVLEQGQCFIQVSNPSLETCFSKHGSR 800

Query: 1565 FSETQKNLQVIKGLVAIAKNPCLHPGDVRILEAVDAPELQHLSDCLVFPQKGDRPHTNEA 1386
            FSET+KNLQVI G V IAKNPCLHPGDVRILEAVDAP L HL DCLVFPQKGDRPHTNEA
Sbjct: 801  FSETKKNLQVITGTVVIAKNPCLHPGDVRILEAVDAPGLCHLHDCLVFPQKGDRPHTNEA 860

Query: 1385 SGSDLDGDLYFVTWDSNLIPPSKTSWMPMDYAPVEAKSLPREVKHPDIIDFFSKNMVTES 1206
            SGSDLDGDLYFVTWD NLIPPSK SW PM Y   E K L R V H DIIDFF+KNMV ES
Sbjct: 861  SGSDLDGDLYFVTWDENLIPPSKQSWTPMQYDAAEPKLLSRPVSHQDIIDFFAKNMVNES 920

Query: 1205 LGTICNAHVVHADLSEYGALDEKCIKLAEMAAIAVDFPKTGKIVTMPFEYKPKMYPDFMG 1026
            LG ICNAHVV ADLSEYGALDE CIKLAE+AA AVDFPKTGK+VT+P   KPKMYPDFMG
Sbjct: 921  LGAICNAHVVRADLSEYGALDENCIKLAELAATAVDFPKTGKLVTLPQYLKPKMYPDFMG 980

Query: 1025 KEDFQSYKSKKILGKLYRQVKDAY-DEGEAATSDLIFSLNKIPYDTDLEIPGSEQFIKHA 849
            KE++QSYKS KILG+LYR +KDAY D+  AA+S+L  S   IPYDT+LE+ GS  +I  A
Sbjct: 981  KEEYQSYKSTKILGRLYRDIKDAYGDDDAAASSELNCSSGDIPYDTNLEVLGSADYILEA 1040

Query: 848  WNSKCSYDGQLNGLLGQYRVTREEEVVTGHIWSMPKYSSKKLGDLKERLKHAYNNLRKEF 669
            W+ KCSYDGQL GLLGQY+V +EEE+VTGHIWSMP Y+S+KLG+LKERLKH+Y+ L+KEF
Sbjct: 1041 WDQKCSYDGQLKGLLGQYKVKKEEELVTGHIWSMPMYNSRKLGELKERLKHSYSALKKEF 1100

Query: 668  RRVFEQIEPDFEFLADDEKNAIYEKKASAWYQVTYHPTWLQRSLELHHPDCVGETVMLSF 489
            R+VFE+++ DFE L DDEKN +YE+KASAWYQVTYHP W+++SLEL  PD  G   +LSF
Sbjct: 1101 RQVFEKMDLDFEQLTDDEKNLLYERKASAWYQVTYHPKWIKKSLELQEPDAAGNATILSF 1160

Query: 488  AWIAVDYLAQIKIRRRGSWNLDSSKPIDSLGRYLADKI 375
            AWIA DYLA+IKI+ RG+  +D++KP++SL +YLAD+I
Sbjct: 1161 AWIAADYLARIKIKHRGTEGVDTAKPVNSLVKYLADRI 1198


>ref|XP_011026450.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Populus euphratica]
          Length = 1200

 Score = 1476 bits (3820), Expect = 0.0
 Identities = 707/998 (70%), Positives = 844/998 (84%), Gaps = 1/998 (0%)
 Frame = -3

Query: 3365 EINAIRQYQDSSGFVILLQLASSPSIHYRTADDDIEVSVPFDLLDDDDPWIRTTDFTPSG 3186
            +IN I QY ++S  V+LLQLAS+P + YRTADDDIE  VPFDLLDDDDPWIRTTDFT SG
Sbjct: 203  DINEIIQYTETSCLVLLLQLASAPWVWYRTADDDIEAWVPFDLLDDDDPWIRTTDFTGSG 262

Query: 3185 AIGRCNMYRISIPPRKGAILKKALEYLKESRVYI-QDISSAKKLLIKDEPDFGMTLSDPF 3009
            AIGRC+ YR+SIPPR G+ L+KA++YLKE RV + Q+ +  +++ I DEPDFGM +SDPF
Sbjct: 263  AIGRCHSYRVSIPPRHGSKLRKAVKYLKERRVEVLQEENHRRRIRILDEPDFGMPMSDPF 322

Query: 3008 FCIQHKQGITFGVLFLVNAIMHKGIINQHQMSDMFFDLLRLESEEVNLAALKHIYSYKRP 2829
            FCI HK+GI F VLFLVNA+MHKGI NQHQ+S+ FFDLLR +  EVN++ALKHI +Y+RP
Sbjct: 323  FCIHHKEGIAFDVLFLVNAVMHKGIFNQHQLSNDFFDLLRNQHTEVNVSALKHICTYRRP 382

Query: 2828 LFDASRKLESVQQRLHNNPKLTERPKQLEDIVEVRRLIITPSKAYCLPPEVELSNRVLRH 2649
            +F+A ++L++VQ+ L  NP L + PKQL DIVE+RRL+ITP+KAYCLPPEVELSNRVLR 
Sbjct: 383  VFNAYKRLKAVQEWLLKNPNLFKNPKQLGDIVEIRRLVITPTKAYCLPPEVELSNRVLRK 442

Query: 2648 YRDVADRFLRVTFMDEGMRTLNKNVLNSYAASIVRDVTSYSNPQRTTMFKRVKNILNKGF 2469
            Y+DVADRFLRVTFMDEG++ +N NVLN Y A IVRD+TS S  Q+T +FKRV++IL +GF
Sbjct: 443  YKDVADRFLRVTFMDEGLQRMNSNVLNYYVAPIVRDITSNSFHQKTRIFKRVRSILTEGF 502

Query: 2468 YICGRKYCFLAFSANQLRDCSAWFFAEHKNVRVANIISWMGRFTNRNVAKCAARMGQCFS 2289
            Y+CGR+Y FLAFSANQLRD SAWFFAE +NV V +I SWMG+FTNRN+AKCAARMGQCFS
Sbjct: 503  YLCGRRYSFLAFSANQLRDQSAWFFAEERNVSVLDIKSWMGKFTNRNIAKCAARMGQCFS 562

Query: 2288 STYATVEVPLSQVDLQLPDIKRNNFVFSDGIGMMTSGLAAEVAARLRLTQNPPCAYQIRY 2109
            STYAT+EVP  +V+  LPDI+RN +VFSDGIG++T  LA EVA +L+L  +PPCAYQIRY
Sbjct: 563  STYATIEVPPEEVNFDLPDIERNGYVFSDGIGIITPDLAREVAEKLKLDIDPPCAYQIRY 622

Query: 2108 AGCKGVIACWPSKTNGHRLYLRPSMQKFESSHTILEICSWTRFQPGFLNRQIITLLSALD 1929
            AGCKGV+ACWP K +G  L LRPSM KF+S+HT LEICSWTRFQPGFLNRQIITLLS L+
Sbjct: 623  AGCKGVVACWPGKGDGVHLSLRPSMNKFQSNHTTLEICSWTRFQPGFLNRQIITLLSTLN 682

Query: 1928 VRDNIFWEMQESMMLRLNLMLEDTDVAFDVITASCAEQGNTAAIMLSAGFNPKTEPHLRG 1749
            V D +FW+MQE+M+ +LN M  ++DVAFDV+TASCA+QGN AAIMLSAGF P+ EPHLRG
Sbjct: 683  VPDAVFWKMQETMVSKLNQMFVNSDVAFDVLTASCADQGNVAAIMLSAGFKPQKEPHLRG 742

Query: 1748 MLTSVRAAQLRDLRERARIFVPSGRWLMGCLDELAVLEQGQCFIQVSGPCLENCFSHHGS 1569
            MLT VRAAQL  LRE+ARIFVPSGRWLMGCLDEL +LEQGQCFIQVS   LE CF  HG+
Sbjct: 743  MLTCVRAAQLWGLREKARIFVPSGRWLMGCLDELGMLEQGQCFIQVSNSSLEKCFIKHGA 802

Query: 1568 KFSETQKNLQVIKGLVAIAKNPCLHPGDVRILEAVDAPELQHLSDCLVFPQKGDRPHTNE 1389
            KFSE +KNLQV+KG V IAKNPCLHPGDVR+LEAVD P L HL DCLVFPQKG+RPHTNE
Sbjct: 803  KFSEAKKNLQVVKGTVVIAKNPCLHPGDVRVLEAVDVPGLHHLYDCLVFPQKGERPHTNE 862

Query: 1388 ASGSDLDGDLYFVTWDSNLIPPSKTSWMPMDYAPVEAKSLPREVKHPDIIDFFSKNMVTE 1209
            ASGSDLDGDLYFVTWD NLIPPSK SW+PM Y   EAK L R V H DII+FF+KNMV E
Sbjct: 863  ASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAKLLARPVNHQDIIEFFAKNMVNE 922

Query: 1208 SLGTICNAHVVHADLSEYGALDEKCIKLAEMAAIAVDFPKTGKIVTMPFEYKPKMYPDFM 1029
            +LG ICNAHVVHADLSE+GA+DEKC+ LAE+AA AVDFPKTGK+VTMP   KPK+YPDFM
Sbjct: 923  NLGAICNAHVVHADLSEHGAMDEKCLTLAELAATAVDFPKTGKVVTMPSYLKPKVYPDFM 982

Query: 1028 GKEDFQSYKSKKILGKLYRQVKDAYDEGEAATSDLIFSLNKIPYDTDLEIPGSEQFIKHA 849
            GKE++QSYKS+KILG+LYRQ+KDAYDE  AA+S+L      IPYD+DLE+ G+  +I  A
Sbjct: 983  GKEEYQSYKSEKILGRLYRQIKDAYDEDVAASSELNPVPGDIPYDSDLEVVGASDYINDA 1042

Query: 848  WNSKCSYDGQLNGLLGQYRVTREEEVVTGHIWSMPKYSSKKLGDLKERLKHAYNNLRKEF 669
            W+ KCSYDGQLNGLL QY+V REEE+VTGHIWSMPKYSS+K G+LK+RLKH+YN+L+KEF
Sbjct: 1043 WDQKCSYDGQLNGLLSQYKVKREEELVTGHIWSMPKYSSRKQGELKDRLKHSYNSLKKEF 1102

Query: 668  RRVFEQIEPDFEFLADDEKNAIYEKKASAWYQVTYHPTWLQRSLELHHPDCVGETVMLSF 489
            R++FE+++ +FE L D EKN +YE+KASAWYQV YHP W+++SLEL  PD  G +VMLSF
Sbjct: 1103 RQIFEKMDLEFEQLEDGEKNKLYEQKASAWYQVAYHPHWVKKSLELQDPDGAGTSVMLSF 1162

Query: 488  AWIAVDYLAQIKIRRRGSWNLDSSKPIDSLGRYLADKI 375
             WIA DYLA+IKIR R + N+DS+KP++SL +YLAD+I
Sbjct: 1163 GWIAADYLARIKIRHRETGNVDSAKPVNSLAKYLADRI 1200


>ref|XP_012076580.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Jatropha curcas]
            gi|643724398|gb|KDP33599.1| hypothetical protein
            JCGZ_07170 [Jatropha curcas]
          Length = 1199

 Score = 1469 bits (3803), Expect = 0.0
 Identities = 716/998 (71%), Positives = 828/998 (82%), Gaps = 1/998 (0%)
 Frame = -3

Query: 3365 EINAIRQYQDSSGFVILLQLASSPSIHYRTADDDIEVSVPFDLLDDDDPWIRTTDFTPSG 3186
            +IN ++QY D+S  VILLQLAS+P + YRTADDDIEVSVPFDLLDDDDPWIRTTDFTPSG
Sbjct: 203  DINEVKQYTDTSCIVILLQLASAPLVWYRTADDDIEVSVPFDLLDDDDPWIRTTDFTPSG 262

Query: 3185 AIGRCNMYRISIPPRKGAILKKALEYLKESRVYIQDISSAKKLLIKDEPDFGMTLSDPFF 3006
            AIGRCN YR+SIPPR GA LK+A  +LKE RV  Q+ S  + L I +EPD+GM +SDPFF
Sbjct: 263  AIGRCNFYRVSIPPRHGAKLKRARNFLKERRV--QEDSLRRPLKIVNEPDYGMPMSDPFF 320

Query: 3005 CIQHKQGITFGVLFLVNAIMHKGIINQHQMSDMFFDLLRLESEEVNLAALKHIYSYKRPL 2826
            CI HK+GI F ++FLVNA+MHKGI NQHQ+SD FFDLLR +S ++N+AALKHI SYK+P+
Sbjct: 321  CIHHKEGIAFEIMFLVNAVMHKGIFNQHQLSDNFFDLLRNQSLDINVAALKHICSYKQPV 380

Query: 2825 FDASRKLESVQQRLHNNPKLTERPKQLEDIVEVRRLIITPSKAYCLPPEVELSNRVLRHY 2646
            FDA + L++VQ+ L  NPKL +R KQL+DIVE+RRL +TP++AYCLPPEVELSNRVLR Y
Sbjct: 381  FDAHKGLKAVQEWLLKNPKLFKRSKQLDDIVEIRRLALTPTRAYCLPPEVELSNRVLRKY 440

Query: 2645 RDVADRFLRVTFMDEGMRTLNKNVLNSYAASIVRDVTSYSNPQRTTMFKRVKNILNKGFY 2466
            +++ADRFLRVTFMDEG++T+N N L  Y A IVRD+TS S  Q+T +F+RVK+IL  GF 
Sbjct: 441  KNIADRFLRVTFMDEGLQTINANTLTYYVAPIVRDITSTSFSQKTRIFRRVKSILTDGFN 500

Query: 2465 ICGRKYCFLAFSANQLRDCSAWFFAEHKNVRVANIISWMGRFTNRNVAKCAARMGQCFSS 2286
            +CGR+Y FLAFS+NQLRD SAWFFAE   + V  I  WMGRFTNRN+AKCAARMGQCFSS
Sbjct: 501  LCGRRYSFLAFSSNQLRDRSAWFFAEDGKISVGQIRKWMGRFTNRNIAKCAARMGQCFSS 560

Query: 2285 TYATVEVPLSQVDLQLPDIKRNNFVFSDGIGMMTSGLAAEVAARLRLTQNPPCAYQIRYA 2106
            TYATVEVP S+V+  LPDI+RN ++FSDGIG +T  LA EVA +L+L  N PCAYQIRYA
Sbjct: 561  TYATVEVPSSEVNHALPDIERNGYIFSDGIGTITPDLAKEVAEKLKLDINLPCAYQIRYA 620

Query: 2105 GCKGVIACWPSKTNGHRLYLRPSMQKFESSHTILEICSWTRFQPGFLNRQIITLLSALDV 1926
            GCKGV+ACWP++ +G RL LRPSM KF+S+HT LEICSWTRFQPGFLNRQIITLLS L+V
Sbjct: 621  GCKGVVACWPAQGDGIRLSLRPSMNKFQSNHTTLEICSWTRFQPGFLNRQIITLLSTLNV 680

Query: 1925 RDNIFWEMQESMMLRLNLMLEDTDVAFDVITASCAEQGNTAAIMLSAGFNPKTEPHLRGM 1746
             D +FWEMQ +M+ +LN ML D DVAFDVIT SCAEQGNTAAIMLSAGF P+ EPHLRGM
Sbjct: 681  SDEVFWEMQTAMVSKLNKMLTDADVAFDVITKSCAEQGNTAAIMLSAGFKPQNEPHLRGM 740

Query: 1745 LTSVRAAQLRDLRERARIFVPSGRWLMGCLDELAVLEQGQCFIQVSGPCLENCFSHHGSK 1566
            LT +RAAQ   LRE+ARIFV SGRWLMGCLDEL VLEQGQCFIQVS PCLE CFS HGSK
Sbjct: 741  LTCIRAAQFWGLREKARIFVTSGRWLMGCLDELGVLEQGQCFIQVSNPCLETCFSKHGSK 800

Query: 1565 FSETQKNLQVIKGLVAIAKNPCLHPGDVRILEAVDAPELQHLSDCLVFPQKGDRPHTNEA 1386
            FSET+KNLQVIKG V IAKNPCLHPGDVRILEAVDAP L HL DCLVFPQKGDRPHTNEA
Sbjct: 801  FSETKKNLQVIKGTVVIAKNPCLHPGDVRILEAVDAPGLHHLHDCLVFPQKGDRPHTNEA 860

Query: 1385 SGSDLDGDLYFVTWDSNLIPPSKTSWMPMDYAPVEAKSLPREVKHPDIIDFFSKNMVTES 1206
            SGSDLDGDLYFVTWD NLIPPSK SW PM Y   EAK L R V H DIIDFF+KNMV E+
Sbjct: 861  SGSDLDGDLYFVTWDDNLIPPSKKSWTPMQYDAAEAKLLNRPVSHQDIIDFFAKNMVNEN 920

Query: 1205 LGTICNAHVVHADLSEYGALDEKCIKLAEMAAIAVDFPKTGKIVTMPFEYKPKMYPDFMG 1026
            LG ICNAHVVHADLSE+GALDE CIKLAE+AA AVDFPKTGK+VTMP   KPKMYPDFMG
Sbjct: 921  LGAICNAHVVHADLSEHGALDENCIKLAELAATAVDFPKTGKLVTMPPYLKPKMYPDFMG 980

Query: 1025 KEDFQSYKSKKILGKLYRQVKDAY-DEGEAATSDLIFSLNKIPYDTDLEIPGSEQFIKHA 849
            KE++QSYKS KILG+LYRQ+ DAY D+  AA S+L      IPYD DLE+ GS  +I  A
Sbjct: 981  KEEYQSYKSTKILGRLYRQIIDAYGDDDAAAFSELNCLSGDIPYDADLEVLGSADYILEA 1040

Query: 848  WNSKCSYDGQLNGLLGQYRVTREEEVVTGHIWSMPKYSSKKLGDLKERLKHAYNNLRKEF 669
            W+ KCSYDGQL GLLGQY+V REEE+VTGHIWSMP  +S+K GDLKERLKH+Y+ L+KEF
Sbjct: 1041 WDQKCSYDGQLKGLLGQYKVKREEELVTGHIWSMPMSNSRKQGDLKERLKHSYSALKKEF 1100

Query: 668  RRVFEQIEPDFEFLADDEKNAIYEKKASAWYQVTYHPTWLQRSLELHHPDCVGETVMLSF 489
            R+VFE +  D E L DDEKN  YE+KASAWYQV YHP W+++SLEL   D  G   MLSF
Sbjct: 1101 RQVFEGMNLDVEQLTDDEKNLQYERKASAWYQVAYHPKWIKKSLELQESDAPGNATMLSF 1160

Query: 488  AWIAVDYLAQIKIRRRGSWNLDSSKPIDSLGRYLADKI 375
            +WIA DYLA+IKI+RRG+  +D++KP++SL +YL D+I
Sbjct: 1161 SWIAADYLARIKIKRRGTEGIDTAKPVNSLVKYLTDRI 1198


>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
            gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase,
            putative [Ricinus communis]
          Length = 1203

 Score = 1465 bits (3793), Expect = 0.0
 Identities = 711/1003 (70%), Positives = 826/1003 (82%), Gaps = 6/1003 (0%)
 Frame = -3

Query: 3365 EINAIRQYQDSSGFVILLQLASSPSIHYRTADDDIEVSVPFDLLDDDDPWIRTTDFTPSG 3186
            +IN I+QY D+S  VILLQLAS+PS+ YRTADDDIEV VPFDLLDDDDPWIRTTDFTPSG
Sbjct: 203  DINEIKQYTDTSCLVILLQLASAPSVWYRTADDDIEVLVPFDLLDDDDPWIRTTDFTPSG 262

Query: 3185 AIGRCNMYRISIPPRKGAILKKALEYLKESRVYIQDISSAKKLLIKDEPDFGMTLSDPFF 3006
            AIGRCN YR+SIPPR GA LK+AL +L+E RV  Q+    + L +  EP++ M +SDPFF
Sbjct: 263  AIGRCNSYRVSIPPRHGAKLKRALNFLRERRV--QEDCLRRPLHVTAEPEYEMPMSDPFF 320

Query: 3005 CIQHKQGITFGVLFLVNAIMHKGIINQHQMSDMFFDLLRLESEEVNLAALKHIYSYKRPL 2826
            CI H++G+ F ++FLVNA+MHKGI NQHQ+SD FFDLLR +  +VN+AAL+HI SYK P+
Sbjct: 321  CIHHEEGVDFNLMFLVNAVMHKGIFNQHQLSDSFFDLLRNQPLDVNIAALRHICSYKHPV 380

Query: 2825 FDASRKLESVQQRLHNNPKLTERPKQLEDIVEVRRLIITPSKAYCLPPEVELSNRVLRHY 2646
            FDA ++L++VQQ L  NPKL    KQL+DIVE+RRL ITP++AYCLPPEVELSNRVLR Y
Sbjct: 381  FDAHKRLKAVQQWLLKNPKLFRSSKQLDDIVEIRRLAITPTRAYCLPPEVELSNRVLRRY 440

Query: 2645 RDVADRFLRVTFMDEGMRTLNKNVLNSYAASIVRDVTSYSNPQRTTMFKRVKNILNKGFY 2466
            +D+AD+FLRVTFMDEG++T+N N L  Y A IVRD+TS S  Q+T +FKRVK+IL  GFY
Sbjct: 441  KDIADQFLRVTFMDEGLQTMNANTLTYYCAPIVRDITSNSFSQKTRIFKRVKSILTDGFY 500

Query: 2465 ICGRKYCFLAFSANQLRDCSAWFFAEHKNVRVANIISWMGRFTNRNVAKCAARMGQCFSS 2286
            +CGRKY FLAFS+NQLRD SAWFFAE     V+ I +WMG+FTNRN+AKCAARMGQCFSS
Sbjct: 501  LCGRKYSFLAFSSNQLRDRSAWFFAEDGKTSVSKIRNWMGKFTNRNIAKCAARMGQCFSS 560

Query: 2285 TYATVEVPLSQVDLQLPDIKRNNFVFSDGIGMMTSGLAAEVAARLRLTQNPPCAYQIRYA 2106
            TYATVEVP ++  L LPDI+RNN++FSDGIGM+T  LA EVA +L+L  NPPCAYQIRYA
Sbjct: 561  TYATVEVPSAEAILDLPDIERNNYIFSDGIGMITPDLAKEVAEKLKLEVNPPCAYQIRYA 620

Query: 2105 GCKGVIACWPSKTNGHRLYLRPSMQKFESSHTILEICSWTRFQPGFLNRQIITLLSALDV 1926
            GCKGV+ACWP+  +G RL LR SM KF S+HT LEICSWTRFQPGFLNRQIITLLS LDV
Sbjct: 621  GCKGVVACWPAHIDGIRLSLRVSMNKFHSNHTTLEICSWTRFQPGFLNRQIITLLSTLDV 680

Query: 1925 RDNIFWEMQESMMLRLNLMLEDTDVAFDVITASCAEQGNTAAIMLSAGFNPKTEPHLRGM 1746
             D IFW+MQ  M+ +LN M  D DVAFDV+TASCAEQGNTAAIMLSAGFNPKTEPHL GM
Sbjct: 681  PDEIFWKMQIVMVSKLNQMFMDADVAFDVVTASCAEQGNTAAIMLSAGFNPKTEPHLCGM 740

Query: 1745 LTSVRAAQLRDLRERARIFVPSGRWLMGCLDELAVLEQGQCFIQVSGPCLENCFSHHGSK 1566
            LT +RAAQL  LRE+ RIFVPSGRWLMGCLDEL VLE GQCFIQVS P LE+CF  HGS+
Sbjct: 741  LTCIRAAQLWGLREKTRIFVPSGRWLMGCLDELGVLEHGQCFIQVSNPSLESCFWKHGSR 800

Query: 1565 FSETQKNLQVIKGLVAIAKNPCLHPGDVRILEAVDAPELQHLSDCLVFPQKGDRPHTNEA 1386
            FSE++K LQV+KG V +AKNPCLHPGD+RILEAVDAPEL HL DCLVFPQKGDRPHTNEA
Sbjct: 801  FSESKKKLQVVKGTVVVAKNPCLHPGDIRILEAVDAPELHHLHDCLVFPQKGDRPHTNEA 860

Query: 1385 SGSDLDGDLYFVTWDSNLIPPSKTSWMPMDYAPVEAKSLPREVKHPDIIDFFSKNMVTES 1206
            SGSDLDGDLYFVTWD NLIPPSK SW+PM Y   EAK L R V H DIIDFF+KNMV E+
Sbjct: 861  SGSDLDGDLYFVTWDENLIPPSKRSWLPMQYDAAEAKQLNRPVNHQDIIDFFAKNMVNEN 920

Query: 1205 LGTICNAHVVHADLSEYGALDEKCIKLAEMAAIAVDFPKTGKIVTMPFEYKPKMYPDFMG 1026
            LG ICNAHVVHADLSEYGALDE CIKLAE+AA AVDFPKTGK+VTMP   KPK+YPDFMG
Sbjct: 921  LGAICNAHVVHADLSEYGALDENCIKLAELAATAVDFPKTGKLVTMPPHLKPKLYPDFMG 980

Query: 1025 KEDFQSYKSKKILGKLYRQVKDAY------DEGEAATSDLIFSLNKIPYDTDLEIPGSEQ 864
            KED+QSY S KILG+LYRQVKD Y      D+  A +S+L      IPYD DLE+ GS  
Sbjct: 981  KEDYQSYNSNKILGRLYRQVKDDYNDDDDDDDDAATSSELNLVRGDIPYDKDLEVSGSSD 1040

Query: 863  FIKHAWNSKCSYDGQLNGLLGQYRVTREEEVVTGHIWSMPKYSSKKLGDLKERLKHAYNN 684
            +I  AW+ KCSYDGQL GLL QY+V REEEVVTGHIWSMPK +S+K G+LKERLK +Y++
Sbjct: 1041 YILDAWDQKCSYDGQLKGLLAQYKVKREEEVVTGHIWSMPKCNSRKQGELKERLKQSYHS 1100

Query: 683  LRKEFRRVFEQIEPDFEFLADDEKNAIYEKKASAWYQVTYHPTWLQRSLELHHPDCVGET 504
            L+KEFR+VFE+++ DFE L +DEKN +YE+KASAWYQV YHP W+ +S+EL  PD  G  
Sbjct: 1101 LKKEFRQVFEKMDSDFEQLTEDEKNLLYEQKASAWYQVAYHPKWVNKSMELQEPDAAGCA 1160

Query: 503  VMLSFAWIAVDYLAQIKIRRRGSWNLDSSKPIDSLGRYLADKI 375
             MLSFAWIA DYLA+IKIR RG   +D+SKP++SL +YLAD+I
Sbjct: 1161 SMLSFAWIAADYLARIKIRCRGFDGVDTSKPVNSLVKYLADRI 1203