BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00008136
         (2826 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP12599.1| unnamed protein product [Coffea canephora]           1306   0.0  
ref|XP_009779935.1| PREDICTED: twinkle homolog protein, chloropl...  1032   0.0  
ref|XP_006360317.1| PREDICTED: twinkle homolog protein, chloropl...  1015   0.0  
ref|XP_010315626.1| PREDICTED: twinkle homolog protein, chloropl...  1012   0.0  
ref|XP_004231556.1| PREDICTED: twinkle homolog protein, chloropl...  1011   0.0  
ref|XP_011096707.1| PREDICTED: twinkle homolog protein, chloropl...   992   0.0  
ref|XP_012827508.1| PREDICTED: twinkle homolog protein, chloropl...   989   0.0  
ref|XP_010315627.1| PREDICTED: twinkle homolog protein, chloropl...   962   0.0  
ref|XP_007023031.1| Toprim domain-containing protein isoform 1 [...   962   0.0  
ref|XP_010243933.1| PREDICTED: twinkle homolog protein, chloropl...   953   0.0  
ref|XP_010053033.1| PREDICTED: twinkle homolog protein, chloropl...   952   0.0  
ref|XP_007023033.1| Toprim domain-containing protein isoform 3 [...   949   0.0  
ref|XP_008225676.1| PREDICTED: twinkle homolog protein, chloropl...   945   0.0  
ref|XP_012075515.1| PREDICTED: twinkle homolog protein, chloropl...   939   0.0  
ref|XP_007023032.1| Toprim domain-containing protein isoform 2 [...   938   0.0  
ref|XP_002268852.1| PREDICTED: twinkle homolog protein, chloropl...   937   0.0  
gb|KDP34842.1| hypothetical protein JCGZ_09130 [Jatropha curcas]      937   0.0  
ref|XP_012444430.1| PREDICTED: twinkle homolog protein, chloropl...   929   0.0  
ref|XP_009353864.1| PREDICTED: twinkle homolog protein, chloropl...   927   0.0  
ref|XP_008383370.1| PREDICTED: twinkle homolog protein, chloropl...   927   0.0  

>emb|CDP12599.1| unnamed protein product [Coffea canephora]
          Length = 699

 Score = 1306 bits (3379), Expect = 0.0
 Identities = 628/698 (89%), Positives = 651/698 (93%)
 Frame = -2

Query: 2606 MHLVPRYRHLFNNSNNFIMAGSKHLVFLKSSLFFHTLTPPKAAKFYSQTYPFAAKKLVFS 2427
            MHLVPRY+HLFN SNNFIMAGSKHLVFLKSSLFF TLTPPKAA FYSQTYPF AKKL+FS
Sbjct: 1    MHLVPRYKHLFNISNNFIMAGSKHLVFLKSSLFFPTLTPPKAANFYSQTYPFTAKKLLFS 60

Query: 2426 TILAKPTSPIFCRKSRLSYTPHAPIPRPVSLENIEQDVVNSTXXXXXXXXXXXXXLNAES 2247
            TILAKP SPIFCRKSRLSYTP APIPRPVSLE  E+DV++S              LNAES
Sbjct: 61   TILAKPRSPIFCRKSRLSYTPLAPIPRPVSLETGEEDVIDSAELRFLRVKLEKLGLNAES 120

Query: 2246 CMPGQHNHLLCPMCKGGDSMEMSLSLFVTREGDAAMWTCFRGKCGWKGSTRSFADGKSTY 2067
            CMPGQ+N L+CPMCKGGDSME SLSLF+T+EGDAAMW CFR KCGWKGSTR+FADGKSTY
Sbjct: 121  CMPGQYNGLICPMCKGGDSMEKSLSLFITQEGDAAMWNCFRAKCGWKGSTRAFADGKSTY 180

Query: 2066 GNLSMISKVKQPYREISEESLGLEPLCSELHKYFSERMISGETLRRNSVMQRRYGENQSV 1887
            GNLSMIS VKQP+REISEESLGLEPL +ELHKYFSERMISGETLRRNSVMQRRYGENQSV
Sbjct: 181  GNLSMISIVKQPHREISEESLGLEPLSNELHKYFSERMISGETLRRNSVMQRRYGENQSV 240

Query: 1886 IAFTYWRDGVLVSCKYRDSTKNFWQESNTEKIFYGLDDIKGASDIIIVEGEMDKLSMEEA 1707
            IAFTYWR+GVLVSCKYRDSTKNFWQE NTEKIFYGLDDIKGASDIIIVEGEMDKLSMEEA
Sbjct: 241  IAFTYWREGVLVSCKYRDSTKNFWQEINTEKIFYGLDDIKGASDIIIVEGEMDKLSMEEA 300

Query: 1706 GFKNCVSVPDGAPPKVSDKDLPAEEKDMKYQYLWNCKEYLEKASRIILATDGDPPGQXXX 1527
            GFKNCVSVPDGAPPKVSDKDLPAEEKD KYQYLWNCKEYL+KASRIILATDGDPPGQ   
Sbjct: 301  GFKNCVSVPDGAPPKVSDKDLPAEEKDTKYQYLWNCKEYLKKASRIILATDGDPPGQALA 360

Query: 1526 XXXXXXXXXXRCWRVRWPKKNDVEHFKDANEVLMFLGPAVLREVIENAELYPIRGLFNFK 1347
                      RCWRVRWPKKNDVEHFKDANEVLMFLGP VLREVIENAELYPIRGLF+FK
Sbjct: 361  EELARRLGRERCWRVRWPKKNDVEHFKDANEVLMFLGPGVLREVIENAELYPIRGLFDFK 420

Query: 1346 DFFVDINAYYHQTIGYELGVSTGWRALDQLYNVVPGELTVVTGVPNSGKSEWIDALLCNL 1167
            +FFVDI+AYYHQT+GYELGVSTGWRALDQLYNVVPGELTVVTGVPNSGKSEWIDALLCNL
Sbjct: 421  NFFVDIDAYYHQTLGYELGVSTGWRALDQLYNVVPGELTVVTGVPNSGKSEWIDALLCNL 480

Query: 1166 NQRVGWKFAFCSMENRVREHARKLLEKHVRKPFFDVRYGDSIERMGLEELEEGKVWLNDT 987
            N+RVGWKFAFCSMENRVREHARKLLEKHVRKPFFDVRYGDSIERM  EELEEGKVWLN+T
Sbjct: 481  NRRVGWKFAFCSMENRVREHARKLLEKHVRKPFFDVRYGDSIERMSREELEEGKVWLNET 540

Query: 986  FYLIRCENDCLPNINWVLDLARAAILRHGINGLVIDPYNELDHQRPVSQTETEYVSQMLT 807
            FYLIRCENDCLPNINWVLDLARAA+LRHGINGLVIDPYNELDHQRPVSQTETEYVSQMLT
Sbjct: 541  FYLIRCENDCLPNINWVLDLARAAVLRHGINGLVIDPYNELDHQRPVSQTETEYVSQMLT 600

Query: 806  KIKRFAQHHSCHVWFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDPEVG 627
            KIKRFAQHHSCHVWFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIV+HRNRDP VG
Sbjct: 601  KIKRFAQHHSCHVWFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDPGVG 660

Query: 626  PIDQVQVCVRKVRNKVIGTIGEAWLSYNRVTGEYMDVD 513
            PIDQVQVCVRKVRNKVIGTIGEAWLSYNRVTGEYMD+D
Sbjct: 661  PIDQVQVCVRKVRNKVIGTIGEAWLSYNRVTGEYMDID 698


>ref|XP_009779935.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            [Nicotiana sylvestris]
          Length = 699

 Score = 1032 bits (2668), Expect = 0.0
 Identities = 505/701 (72%), Positives = 574/701 (81%), Gaps = 3/701 (0%)
 Frame = -2

Query: 2606 MHLVPRYRHLFNNSNNFIMAGSKHLVFLKSSLFFHTLTPPKAAKFYSQTYPFAAKKLVFS 2427
            M L+P  R + NNSNNF M GSK+ +   S     T+ P  ++K    T+ F  ++L+FS
Sbjct: 1    MILLPYRRLVLNNSNNFAM-GSKYFLHKPSITIHKTIIPVLSSK----THLFQNQRLIFS 55

Query: 2426 TILAKPTSPIFCRKSRLSYTPHAPIPRPVS---LENIEQDVVNSTXXXXXXXXXXXXXLN 2256
            T  +KP SPI    S LSY PH  IP PVS   LE+  + +  S              ++
Sbjct: 56   TFASKPISPIR-GTSNLSYRPHR-IPPPVSGVVLEDPVEGIAESEHVKALKEKLSQVGID 113

Query: 2255 AESCMPGQHNHLLCPMCKGGDSMEMSLSLFVTREGDAAMWTCFRGKCGWKGSTRSFADGK 2076
              SC PGQ++ LLCPMC GGDS E SLSLF+T++G AA WTCFR KCGW+G TR+FAD K
Sbjct: 114  IGSCGPGQYSGLLCPMCTGGDSNEKSLSLFITQDGHAATWTCFRAKCGWRGGTRAFADVK 173

Query: 2075 STYGNLSMISKVKQPYREISEESLGLEPLCSELHKYFSERMISGETLRRNSVMQRRYGEN 1896
            + + ++  I KV + YR+I+EESLGLEPLC  L  YFSERMIS ETLRRN+VMQRRYG+ 
Sbjct: 174  TAFADMKRIGKVTKKYRQITEESLGLEPLCDVLLSYFSERMISRETLRRNAVMQRRYGD- 232

Query: 1895 QSVIAFTYWRDGVLVSCKYRDSTKNFWQESNTEKIFYGLDDIKGASDIIIVEGEMDKLSM 1716
            Q VIAFTY RDG LVSCKYRD TK FWQE++T KIFYGLDDIKGASDIIIVEGEMDKL+M
Sbjct: 233  QIVIAFTYRRDGALVSCKYRDITKKFWQEADTLKIFYGLDDIKGASDIIIVEGEMDKLAM 292

Query: 1715 EEAGFKNCVSVPDGAPPKVSDKDLPAEEKDMKYQYLWNCKEYLEKASRIILATDGDPPGQ 1536
            EEAGF+NCVSVPDGAPP VSDK+LP  +KD KYQYLWNCKEYLEKASRIILATDGDPPGQ
Sbjct: 293  EEAGFRNCVSVPDGAPPVVSDKELPPVDKDTKYQYLWNCKEYLEKASRIILATDGDPPGQ 352

Query: 1535 XXXXXXXXXXXXXRCWRVRWPKKNDVEHFKDANEVLMFLGPAVLREVIENAELYPIRGLF 1356
                         RCWRV WPKK+  + FKDANEVLM+LGP  LREVIE AELYPI+GLF
Sbjct: 353  ALAEELARRLGRERCWRVTWPKKSTKDRFKDANEVLMYLGPGALREVIEGAELYPIQGLF 412

Query: 1355 NFKDFFVDINAYYHQTIGYELGVSTGWRALDQLYNVVPGELTVVTGVPNSGKSEWIDALL 1176
            NFKD+F +I+AYYHQTIGYELGVSTGWR+L+QLYNVVPGELT+VTGVPNSGKSEWIDALL
Sbjct: 413  NFKDYFTEIDAYYHQTIGYELGVSTGWRSLNQLYNVVPGELTIVTGVPNSGKSEWIDALL 472

Query: 1175 CNLNQRVGWKFAFCSMENRVREHARKLLEKHVRKPFFDVRYGDSIERMGLEELEEGKVWL 996
            CNLNQ VGWKFA CSMEN+VR+HARKLLEKH++KPFFDVRYG+S++RM  +E EEGK WL
Sbjct: 473  CNLNQSVGWKFALCSMENKVRDHARKLLEKHIKKPFFDVRYGESVQRMSAQEFEEGKQWL 532

Query: 995  NDTFYLIRCENDCLPNINWVLDLARAAILRHGINGLVIDPYNELDHQRPVSQTETEYVSQ 816
            +DTF+LIRCENDCLPNI+WVL LA+AA+LRHG+NGLVIDPYNELDHQRP SQTETEYVSQ
Sbjct: 533  SDTFFLIRCENDCLPNIDWVLSLAKAAVLRHGVNGLVIDPYNELDHQRPSSQTETEYVSQ 592

Query: 815  MLTKIKRFAQHHSCHVWFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDP 636
            MLTKIKRFAQHHSCHVWFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDP
Sbjct: 593  MLTKIKRFAQHHSCHVWFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDP 652

Query: 635  EVGPIDQVQVCVRKVRNKVIGTIGEAWLSYNRVTGEYMDVD 513
              GP+DQVQVCVRKVRNKV GTIG+A+LSY+RVTGE+MD+D
Sbjct: 653  SAGPVDQVQVCVRKVRNKVSGTIGDAFLSYDRVTGEFMDLD 693


>ref|XP_006360317.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial-like
            [Solanum tuberosum]
          Length = 695

 Score = 1015 bits (2625), Expect = 0.0
 Identities = 497/701 (70%), Positives = 569/701 (81%), Gaps = 3/701 (0%)
 Frame = -2

Query: 2606 MHLVPRYRHLFNNSNNFIMAGSKHLVFLKSSLFFHTLTPPKAAKFYSQTYPFAAKKLVFS 2427
            M  +P  R + NNSNNF+M GSK+ +  K S+   T+       + S    F  ++L+FS
Sbjct: 1    MKFLPYRRIVVNNSNNFVM-GSKYFLH-KPSITLPTI-------YKSIPVLFQTQRLIFS 51

Query: 2426 TILAKPTSPIFCRKSRLSYTPHAPIPRPVS---LENIEQDVVNSTXXXXXXXXXXXXXLN 2256
               +KP SP     S  SY P   IP PVS   LE+ ++++  S              ++
Sbjct: 52   AFASKPISPNRGTSS-FSYRPQR-IPPPVSGVMLEDPKEEIAESDHEKALKQKLSQVGID 109

Query: 2255 AESCMPGQHNHLLCPMCKGGDSMEMSLSLFVTREGDAAMWTCFRGKCGWKGSTRSFADGK 2076
              SC PGQ+N LLCPMCKGG S E SLSLF+T +G AA WTCFR KCGW+G TR+FAD +
Sbjct: 110  IGSCGPGQYNGLLCPMCKGGGSNEKSLSLFITPDGHAATWTCFRAKCGWRGGTRAFADVR 169

Query: 2075 STYGNLSMISKVKQPYREISEESLGLEPLCSELHKYFSERMISGETLRRNSVMQRRYGEN 1896
            + + ++  I KVK+ YR+I+EESLGLEPLC  L  YFSERMIS ETLRRN+VMQ+R+G+ 
Sbjct: 170  TAFADMKRIGKVKKKYRQITEESLGLEPLCDVLLTYFSERMISRETLRRNAVMQQRHGD- 228

Query: 1895 QSVIAFTYWRDGVLVSCKYRDSTKNFWQESNTEKIFYGLDDIKGASDIIIVEGEMDKLSM 1716
            Q VIAFTY RDG LVSCKYR+ TK FWQE++T KIFYGLDDIKGASDIIIVEGEMDKL+M
Sbjct: 229  QVVIAFTYRRDGALVSCKYRNMTKKFWQEADTLKIFYGLDDIKGASDIIIVEGEMDKLAM 288

Query: 1715 EEAGFKNCVSVPDGAPPKVSDKDLPAEEKDMKYQYLWNCKEYLEKASRIILATDGDPPGQ 1536
            EEAGF+NCVSVPDGAPP +SDKDLP  +KD KYQYLWNCKEYLEKASRIILATDGDPPGQ
Sbjct: 289  EEAGFRNCVSVPDGAPPSISDKDLPPVDKDTKYQYLWNCKEYLEKASRIILATDGDPPGQ 348

Query: 1535 XXXXXXXXXXXXXRCWRVRWPKKNDVEHFKDANEVLMFLGPAVLREVIENAELYPIRGLF 1356
                         RCWRV WPKK+ ++HFKDANEVLM LGP  LREVIE AELYPI+GLF
Sbjct: 349  ALAEELARRLGRERCWRVTWPKKSTIDHFKDANEVLMCLGPGALREVIEGAELYPIQGLF 408

Query: 1355 NFKDFFVDINAYYHQTIGYELGVSTGWRALDQLYNVVPGELTVVTGVPNSGKSEWIDALL 1176
            +FK++F +I+AYYHQTIGYELGV TGWR+L+QLYNVVPGELT+VTGVPNSGKSEWIDALL
Sbjct: 409  DFKNYFTEIDAYYHQTIGYELGVPTGWRSLNQLYNVVPGELTIVTGVPNSGKSEWIDALL 468

Query: 1175 CNLNQRVGWKFAFCSMENRVREHARKLLEKHVRKPFFDVRYGDSIERMGLEELEEGKVWL 996
            CNLN  VGWKFA CSMENRVREHARKLLEKH++KPFFDVRYG+S+ERM  +E EEGK WL
Sbjct: 469  CNLNHSVGWKFALCSMENRVREHARKLLEKHIKKPFFDVRYGESVERMSAQEFEEGKQWL 528

Query: 995  NDTFYLIRCENDCLPNINWVLDLARAAILRHGINGLVIDPYNELDHQRPVSQTETEYVSQ 816
            +DTF+LIRCENDCLPNI+WVL LA+AA+LRHG+NGLVIDPYNELDHQRP SQTETEYVSQ
Sbjct: 529  SDTFFLIRCENDCLPNIDWVLSLAKAAVLRHGVNGLVIDPYNELDHQRPSSQTETEYVSQ 588

Query: 815  MLTKIKRFAQHHSCHVWFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDP 636
            MLTKIKRFAQHHSCHVWFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDP
Sbjct: 589  MLTKIKRFAQHHSCHVWFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDP 648

Query: 635  EVGPIDQVQVCVRKVRNKVIGTIGEAWLSYNRVTGEYMDVD 513
              GP+DQVQVCVRKVRNKV GTIG+A+LSY+RVTGE+MD+D
Sbjct: 649  SAGPVDQVQVCVRKVRNKVSGTIGDAFLSYDRVTGEFMDID 689


>ref|XP_010315626.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            isoform X2 [Solanum lycopersicum]
          Length = 695

 Score = 1012 bits (2617), Expect = 0.0
 Identities = 497/701 (70%), Positives = 566/701 (80%), Gaps = 3/701 (0%)
 Frame = -2

Query: 2606 MHLVPRYRHLFNNSNNFIMAGSKHLVFLKSSLFFHTLTPPKAAKFYSQTYPFAAKKLVFS 2427
            M L+P  R + NNSNNF+M GSK+ +  K S+   T+       + S    F  ++L+FS
Sbjct: 1    MILLPYRRIVVNNSNNFVM-GSKYFLH-KPSITLPTI-------YKSIPVLFKTQRLIFS 51

Query: 2426 TILAKPTSPIFCRKSRLSYTPHAPIPRPVS---LENIEQDVVNSTXXXXXXXXXXXXXLN 2256
               +KP SP     S  SY P   IP PVS   LE+ ++D+  S              ++
Sbjct: 52   AFASKPISPNRGTSS-FSYRPQR-IPPPVSGVMLEDPKEDITESDHEKALKQKLSQVGID 109

Query: 2255 AESCMPGQHNHLLCPMCKGGDSMEMSLSLFVTREGDAAMWTCFRGKCGWKGSTRSFADGK 2076
              SC PGQ+N LLCPMCKGG S E SLSLF+T +G AA WTCFR KCGW+G TR+FAD +
Sbjct: 110  IGSCGPGQYNGLLCPMCKGGGSNEKSLSLFITPDGYAATWTCFRAKCGWRGGTRAFADVR 169

Query: 2075 STYGNLSMISKVKQPYREISEESLGLEPLCSELHKYFSERMISGETLRRNSVMQRRYGEN 1896
            + + ++  I KV + YR+I+EESLGLEPLC  L  YFSERMIS ETLRRN+VMQ+R+G+ 
Sbjct: 170  TAFADMKRIGKVNKKYRQITEESLGLEPLCDVLLTYFSERMISRETLRRNAVMQQRHGD- 228

Query: 1895 QSVIAFTYWRDGVLVSCKYRDSTKNFWQESNTEKIFYGLDDIKGASDIIIVEGEMDKLSM 1716
            Q VIAFTY RDG LVSCKYR+ TK FWQE++T KIFYGLDDIKGASDIIIVEGEMDKL+M
Sbjct: 229  QVVIAFTYRRDGALVSCKYRNMTKKFWQEADTLKIFYGLDDIKGASDIIIVEGEMDKLAM 288

Query: 1715 EEAGFKNCVSVPDGAPPKVSDKDLPAEEKDMKYQYLWNCKEYLEKASRIILATDGDPPGQ 1536
            EEAGF+NCVSVPDGAPP +SDKDLP  EKD KYQYLWNCKEYLEK SRIILATDGDPPGQ
Sbjct: 289  EEAGFRNCVSVPDGAPPSISDKDLPPVEKDTKYQYLWNCKEYLEKTSRIILATDGDPPGQ 348

Query: 1535 XXXXXXXXXXXXXRCWRVRWPKKNDVEHFKDANEVLMFLGPAVLREVIENAELYPIRGLF 1356
                         RCWRV WPKK+ ++HFKDANEVLM LGP  LREVIE AELYPI+GLF
Sbjct: 349  ALAEELARRLGRERCWRVTWPKKSTIDHFKDANEVLMCLGPGALREVIEGAELYPIQGLF 408

Query: 1355 NFKDFFVDINAYYHQTIGYELGVSTGWRALDQLYNVVPGELTVVTGVPNSGKSEWIDALL 1176
            NF ++F +I+AYYHQTIGYELGV TGWR+L+ LYNVVPGELT+VTGVPNSGKSEWIDALL
Sbjct: 409  NFNNYFTEIDAYYHQTIGYELGVPTGWRSLNHLYNVVPGELTIVTGVPNSGKSEWIDALL 468

Query: 1175 CNLNQRVGWKFAFCSMENRVREHARKLLEKHVRKPFFDVRYGDSIERMGLEELEEGKVWL 996
            CNLN  VGWKFA CSMENRVREHARKLLEKH++KPFFDVRYG+S+ERM  +E EEGK WL
Sbjct: 469  CNLNYSVGWKFALCSMENRVREHARKLLEKHIKKPFFDVRYGESVERMSAQEFEEGKQWL 528

Query: 995  NDTFYLIRCENDCLPNINWVLDLARAAILRHGINGLVIDPYNELDHQRPVSQTETEYVSQ 816
            +DTF+LIRCENDCLPNI+WVL LA+AA+LRHG+NGLVIDPYNELDHQRP SQTETEYVSQ
Sbjct: 529  SDTFFLIRCENDCLPNIDWVLSLAKAAVLRHGVNGLVIDPYNELDHQRPSSQTETEYVSQ 588

Query: 815  MLTKIKRFAQHHSCHVWFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDP 636
            MLTKIKRFAQHHSCHVWFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDP
Sbjct: 589  MLTKIKRFAQHHSCHVWFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDP 648

Query: 635  EVGPIDQVQVCVRKVRNKVIGTIGEAWLSYNRVTGEYMDVD 513
              GP+DQVQVCVRKVRNKV GTIG+A+LSY+RVTGE+MD+D
Sbjct: 649  SAGPVDQVQVCVRKVRNKVSGTIGDAFLSYDRVTGEFMDID 689


>ref|XP_004231556.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            isoform X1 [Solanum lycopersicum]
          Length = 697

 Score = 1011 bits (2615), Expect = 0.0
 Identities = 497/703 (70%), Positives = 566/703 (80%), Gaps = 5/703 (0%)
 Frame = -2

Query: 2606 MHLVPRYRHLFNNSNNFIMAGSKHLVFLKSSLFFHTLTPPKAAKFYSQTYPFAAKKLVFS 2427
            M L+P  R + NNSNNF+M GSK+ +  K S+   T+       + S    F  ++L+FS
Sbjct: 1    MILLPYRRIVVNNSNNFVM-GSKYFLH-KPSITLPTI-------YKSIPVLFKTQRLIFS 51

Query: 2426 TILAKPTSPIFCRKSRLSYTPHAPIPRPVS-----LENIEQDVVNSTXXXXXXXXXXXXX 2262
               +KP SP     S  SY P   IP PVS     LE+ ++D+  S              
Sbjct: 52   AFASKPISPNRGTSS-FSYRPQR-IPPPVSVSGVMLEDPKEDITESDHEKALKQKLSQVG 109

Query: 2261 LNAESCMPGQHNHLLCPMCKGGDSMEMSLSLFVTREGDAAMWTCFRGKCGWKGSTRSFAD 2082
            ++  SC PGQ+N LLCPMCKGG S E SLSLF+T +G AA WTCFR KCGW+G TR+FAD
Sbjct: 110  IDIGSCGPGQYNGLLCPMCKGGGSNEKSLSLFITPDGYAATWTCFRAKCGWRGGTRAFAD 169

Query: 2081 GKSTYGNLSMISKVKQPYREISEESLGLEPLCSELHKYFSERMISGETLRRNSVMQRRYG 1902
             ++ + ++  I KV + YR+I+EESLGLEPLC  L  YFSERMIS ETLRRN+VMQ+R+G
Sbjct: 170  VRTAFADMKRIGKVNKKYRQITEESLGLEPLCDVLLTYFSERMISRETLRRNAVMQQRHG 229

Query: 1901 ENQSVIAFTYWRDGVLVSCKYRDSTKNFWQESNTEKIFYGLDDIKGASDIIIVEGEMDKL 1722
            + Q VIAFTY RDG LVSCKYR+ TK FWQE++T KIFYGLDDIKGASDIIIVEGEMDKL
Sbjct: 230  D-QVVIAFTYRRDGALVSCKYRNMTKKFWQEADTLKIFYGLDDIKGASDIIIVEGEMDKL 288

Query: 1721 SMEEAGFKNCVSVPDGAPPKVSDKDLPAEEKDMKYQYLWNCKEYLEKASRIILATDGDPP 1542
            +MEEAGF+NCVSVPDGAPP +SDKDLP  EKD KYQYLWNCKEYLEK SRIILATDGDPP
Sbjct: 289  AMEEAGFRNCVSVPDGAPPSISDKDLPPVEKDTKYQYLWNCKEYLEKTSRIILATDGDPP 348

Query: 1541 GQXXXXXXXXXXXXXRCWRVRWPKKNDVEHFKDANEVLMFLGPAVLREVIENAELYPIRG 1362
            GQ             RCWRV WPKK+ ++HFKDANEVLM LGP  LREVIE AELYPI+G
Sbjct: 349  GQALAEELARRLGRERCWRVTWPKKSTIDHFKDANEVLMCLGPGALREVIEGAELYPIQG 408

Query: 1361 LFNFKDFFVDINAYYHQTIGYELGVSTGWRALDQLYNVVPGELTVVTGVPNSGKSEWIDA 1182
            LFNF ++F +I+AYYHQTIGYELGV TGWR+L+ LYNVVPGELT+VTGVPNSGKSEWIDA
Sbjct: 409  LFNFNNYFTEIDAYYHQTIGYELGVPTGWRSLNHLYNVVPGELTIVTGVPNSGKSEWIDA 468

Query: 1181 LLCNLNQRVGWKFAFCSMENRVREHARKLLEKHVRKPFFDVRYGDSIERMGLEELEEGKV 1002
            LLCNLN  VGWKFA CSMENRVREHARKLLEKH++KPFFDVRYG+S+ERM  +E EEGK 
Sbjct: 469  LLCNLNYSVGWKFALCSMENRVREHARKLLEKHIKKPFFDVRYGESVERMSAQEFEEGKQ 528

Query: 1001 WLNDTFYLIRCENDCLPNINWVLDLARAAILRHGINGLVIDPYNELDHQRPVSQTETEYV 822
            WL+DTF+LIRCENDCLPNI+WVL LA+AA+LRHG+NGLVIDPYNELDHQRP SQTETEYV
Sbjct: 529  WLSDTFFLIRCENDCLPNIDWVLSLAKAAVLRHGVNGLVIDPYNELDHQRPSSQTETEYV 588

Query: 821  SQMLTKIKRFAQHHSCHVWFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNR 642
            SQMLTKIKRFAQHHSCHVWFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNR
Sbjct: 589  SQMLTKIKRFAQHHSCHVWFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNR 648

Query: 641  DPEVGPIDQVQVCVRKVRNKVIGTIGEAWLSYNRVTGEYMDVD 513
            DP  GP+DQVQVCVRKVRNKV GTIG+A+LSY+RVTGE+MD+D
Sbjct: 649  DPSAGPVDQVQVCVRKVRNKVSGTIGDAFLSYDRVTGEFMDID 691


>ref|XP_011096707.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            [Sesamum indicum]
          Length = 628

 Score =  992 bits (2565), Expect = 0.0
 Identities = 467/618 (75%), Positives = 534/618 (86%), Gaps = 3/618 (0%)
 Frame = -2

Query: 2357 PIPRP---VSLENIEQDVVNSTXXXXXXXXXXXXXLNAESCMPGQHNHLLCPMCKGGDSM 2187
            PIPRP   V +E +E+ +V+                +  +CMPGQ+N LLCP CKGGDS 
Sbjct: 2    PIPRPIPAVDVETLEKQLVDEKLLIMLRKKLQEIGFDGNACMPGQYNGLLCPSCKGGDSE 61

Query: 2186 EMSLSLFVTREGDAAMWTCFRGKCGWKGSTRSFADGKSTYGNLSMISKVKQPYREISEES 2007
            E SLSL +T +G AA+WTCFR KCGWKG+TR++AD +ST+  +S I+++KQ  R I+EES
Sbjct: 62   EKSLSLHITEDGSAAVWTCFRAKCGWKGTTRAYADVRSTFETMSKITRIKQATRIITEES 121

Query: 2006 LGLEPLCSELHKYFSERMISGETLRRNSVMQRRYGENQSVIAFTYWRDGVLVSCKYRDST 1827
            LGLEPLC+EL  YF+ERMISGETLRRN+V+Q+R G NQ VIAFTY R+G LVSCKYRD T
Sbjct: 122  LGLEPLCNELLAYFAERMISGETLRRNAVLQKRTG-NQIVIAFTYRRNGELVSCKYRDIT 180

Query: 1826 KNFWQESNTEKIFYGLDDIKGASDIIIVEGEMDKLSMEEAGFKNCVSVPDGAPPKVSDKD 1647
            K FWQE++TEKIFYGLDDIK ASDIIIVEGEMDKL+MEEAGFKNCVSVPDGAPPKVS+K 
Sbjct: 181  KKFWQEADTEKIFYGLDDIKEASDIIIVEGEMDKLAMEEAGFKNCVSVPDGAPPKVSNKA 240

Query: 1646 LPAEEKDMKYQYLWNCKEYLEKASRIILATDGDPPGQXXXXXXXXXXXXXRCWRVRWPKK 1467
            LP+EE+D KY+YLWNCK+Y  KASRIILATDGDPPGQ             RCWRV+WPKK
Sbjct: 241  LPSEEEDTKYKYLWNCKDYTAKASRIILATDGDPPGQALAEELARRLGRERCWRVKWPKK 300

Query: 1466 NDVEHFKDANEVLMFLGPAVLREVIENAELYPIRGLFNFKDFFVDINAYYHQTIGYELGV 1287
            ND E FKDANEVLM++GP  LREVIENAELYPIRGLFNFKD+F +I+ YYHQ++G+ELGV
Sbjct: 301  NDSESFKDANEVLMYMGPDALREVIENAELYPIRGLFNFKDYFDEIDDYYHQSLGFELGV 360

Query: 1286 STGWRALDQLYNVVPGELTVVTGVPNSGKSEWIDALLCNLNQRVGWKFAFCSMENRVREH 1107
            STGWRAL++LYNVVPGELT+VTGVPNSGKSEWIDALLCN+N  VGWKFA CSMEN+VREH
Sbjct: 361  STGWRALNELYNVVPGELTIVTGVPNSGKSEWIDALLCNINHSVGWKFALCSMENKVREH 420

Query: 1106 ARKLLEKHVRKPFFDVRYGDSIERMGLEELEEGKVWLNDTFYLIRCENDCLPNINWVLDL 927
            ARKLLEKH+RKPFFDVRYG+S+ERM +EELE+GK WL+D+F LIRCENDCLP+INWVLDL
Sbjct: 421  ARKLLEKHIRKPFFDVRYGESVERMSVEELEQGKKWLSDSFSLIRCENDCLPSINWVLDL 480

Query: 926  ARAAILRHGINGLVIDPYNELDHQRPVSQTETEYVSQMLTKIKRFAQHHSCHVWFVAHPR 747
            AR A+LRHG+NGLVIDPYNELDHQRP +QTETEYVSQMLTKIKRFAQHH CHVWFVAHPR
Sbjct: 481  ARIAVLRHGVNGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHHGCHVWFVAHPR 540

Query: 746  QLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDPEVGPIDQVQVCVRKVRNKVIGTI 567
            QLH+W+GGPPN+YDISGSAHFINKCDNGIVIHRNRDPE GP+D VQVCVRKVRNKVIGTI
Sbjct: 541  QLHNWIGGPPNMYDISGSAHFINKCDNGIVIHRNRDPEAGPVDLVQVCVRKVRNKVIGTI 600

Query: 566  GEAWLSYNRVTGEYMDVD 513
            G+A+LSYNRVTGEY D+D
Sbjct: 601  GDAYLSYNRVTGEYSDID 618


>ref|XP_012827508.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            isoform X1 [Erythranthe guttatus]
            gi|848927528|ref|XP_012827509.1| PREDICTED: twinkle
            homolog protein, chloroplastic/mitochondrial isoform X2
            [Erythranthe guttatus] gi|604299158|gb|EYU19093.1|
            hypothetical protein MIMGU_mgv1a002055mg [Erythranthe
            guttata]
          Length = 721

 Score =  989 bits (2556), Expect = 0.0
 Identities = 491/715 (68%), Positives = 567/715 (79%), Gaps = 17/715 (2%)
 Frame = -2

Query: 2606 MHLVPRYRHLF----NNSNNFIMAGSKHLVFLKSS------LFFHTLTPPKAAKFYSQTY 2457
            M L+P+ + LF    N++   I  GSK+ + LK S         H+L    +   YSQ +
Sbjct: 1    MLLLPQRKLLFSPHSNSTRRIIFMGSKNFLLLKFSPTPVTHAHIHSLD---SRSCYSQIH 57

Query: 2456 PFAAKKLVFSTIL---AKPTSPIFC-RKSRLSYTPHA--PIPRPVS-LENIEQDVVNSTX 2298
             F ++    + +L    K  SPI+  R S  S+TP A  PIPRP++ +E +E+  V+   
Sbjct: 58   FFRSRSNRKNPLLFPSPKHFSPIYQQRSSGYSFTPSAAIPIPRPIAGVETLEKQSVDKKQ 117

Query: 2297 XXXXXXXXXXXXLNAESCMPGQHNHLLCPMCKGGDSMEMSLSLFVTREGDAAMWTCFRGK 2118
                        ++   C+PGQ+N L+CP CKGGDS E SLSL +T +G AA+WTCFR K
Sbjct: 118  LKLLRQKLQEIGIDGTDCLPGQYNGLVCPSCKGGDSQEKSLSLHITDDGGAAVWTCFRAK 177

Query: 2117 CGWKGSTRSFADGKSTYGNLSMISKVKQPYREISEESLGLEPLCSELHKYFSERMISGET 1938
            CGWKG+TR+FAD KSTY  ++   KVKQP R I+EESLGLEPLC+EL  YF+ERMISGET
Sbjct: 178  CGWKGTTRAFADVKSTYAKMNTTQKVKQP-RVITEESLGLEPLCNELLAYFAERMISGET 236

Query: 1937 LRRNSVMQRRYGENQSVIAFTYWRDGVLVSCKYRDSTKNFWQESNTEKIFYGLDDIKGAS 1758
            LRRN VMQ+R G NQ VIAFTY R+  L+SCKYRD TK FWQE+NTEKIFYGLDDIK AS
Sbjct: 237  LRRNYVMQKRTG-NQIVIAFTYRRNKELISCKYRDITKKFWQEANTEKIFYGLDDIKEAS 295

Query: 1757 DIIIVEGEMDKLSMEEAGFKNCVSVPDGAPPKVSDKDLPAEEKDMKYQYLWNCKEYLEKA 1578
            D+IIVEGEMDKL+MEEAGFKNCVSVPDGAPPKVS+K L +EE+D KY YLWNCK+Y  KA
Sbjct: 296  DVIIVEGEMDKLAMEEAGFKNCVSVPDGAPPKVSNKSLASEEEDTKYTYLWNCKDYTAKA 355

Query: 1577 SRIILATDGDPPGQXXXXXXXXXXXXXRCWRVRWPKKNDVEHFKDANEVLMFLGPAVLRE 1398
            SRIILATDGDPPGQ             RCWRV+WPKKND E FKDANEVLM++GP  LR 
Sbjct: 356  SRIILATDGDPPGQALAEELARRLGRERCWRVKWPKKNDTESFKDANEVLMYMGPDALRG 415

Query: 1397 VIENAELYPIRGLFNFKDFFVDINAYYHQTIGYELGVSTGWRALDQLYNVVPGELTVVTG 1218
            VIENAELYPI+GLFNFKD+F +IN YYHQT+G+ELGVSTGW +L+ LYNVVPGELT+VTG
Sbjct: 416  VIENAELYPIKGLFNFKDYFDEINDYYHQTLGFELGVSTGWTSLNDLYNVVPGELTIVTG 475

Query: 1217 VPNSGKSEWIDALLCNLNQRVGWKFAFCSMENRVREHARKLLEKHVRKPFFDVRYGDSIE 1038
            VPNSGKSEWIDALLCNLN  VGWKFA CSMEN+VREHARKLLEKH++KPFFDVRYG+S+E
Sbjct: 476  VPNSGKSEWIDALLCNLNHSVGWKFALCSMENKVREHARKLLEKHIKKPFFDVRYGESVE 535

Query: 1037 RMGLEELEEGKVWLNDTFYLIRCENDCLPNINWVLDLARAAILRHGINGLVIDPYNELDH 858
            RM  +E E GK WL D+F LIRCENDCLP+I WVLDLAR A+LRHG+NGLVIDPYNE+DH
Sbjct: 536  RMSTKEFERGKKWLGDSFSLIRCENDCLPSITWVLDLARIAVLRHGVNGLVIDPYNEIDH 595

Query: 857  QRPVSQTETEYVSQMLTKIKRFAQHHSCHVWFVAHPRQLHHWVGGPPNLYDISGSAHFIN 678
            QRP SQTETEYVSQMLTKIKRFAQHHSCHVWFVAHPRQL +WVG PPNLYDISGSAHFIN
Sbjct: 596  QRPPSQTETEYVSQMLTKIKRFAQHHSCHVWFVAHPRQLQNWVGSPPNLYDISGSAHFIN 655

Query: 677  KCDNGIVIHRNRDPEVGPIDQVQVCVRKVRNKVIGTIGEAWLSYNRVTGEYMDVD 513
            KCDNGIVIHRNRDPE GP+D VQVCVRKVRNKV+GTIG+A+LSYNRVTGEYMD++
Sbjct: 656  KCDNGIVIHRNRDPEAGPVDIVQVCVRKVRNKVVGTIGDAYLSYNRVTGEYMDIN 710


>ref|XP_010315627.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            isoform X3 [Solanum lycopersicum]
          Length = 663

 Score =  962 bits (2487), Expect = 0.0
 Identities = 473/673 (70%), Positives = 537/673 (79%), Gaps = 5/673 (0%)
 Frame = -2

Query: 2606 MHLVPRYRHLFNNSNNFIMAGSKHLVFLKSSLFFHTLTPPKAAKFYSQTYPFAAKKLVFS 2427
            M L+P  R + NNSNNF+M GSK+ +  K S+   T+       + S    F  ++L+FS
Sbjct: 1    MILLPYRRIVVNNSNNFVM-GSKYFLH-KPSITLPTI-------YKSIPVLFKTQRLIFS 51

Query: 2426 TILAKPTSPIFCRKSRLSYTPHAPIPRPVS-----LENIEQDVVNSTXXXXXXXXXXXXX 2262
               +KP SP     S  SY P   IP PVS     LE+ ++D+  S              
Sbjct: 52   AFASKPISPNRGTSS-FSYRPQR-IPPPVSVSGVMLEDPKEDITESDHEKALKQKLSQVG 109

Query: 2261 LNAESCMPGQHNHLLCPMCKGGDSMEMSLSLFVTREGDAAMWTCFRGKCGWKGSTRSFAD 2082
            ++  SC PGQ+N LLCPMCKGG S E SLSLF+T +G AA WTCFR KCGW+G TR+FAD
Sbjct: 110  IDIGSCGPGQYNGLLCPMCKGGGSNEKSLSLFITPDGYAATWTCFRAKCGWRGGTRAFAD 169

Query: 2081 GKSTYGNLSMISKVKQPYREISEESLGLEPLCSELHKYFSERMISGETLRRNSVMQRRYG 1902
             ++ + ++  I KV + YR+I+EESLGLEPLC  L  YFSERMIS ETLRRN+VMQ+R+G
Sbjct: 170  VRTAFADMKRIGKVNKKYRQITEESLGLEPLCDVLLTYFSERMISRETLRRNAVMQQRHG 229

Query: 1901 ENQSVIAFTYWRDGVLVSCKYRDSTKNFWQESNTEKIFYGLDDIKGASDIIIVEGEMDKL 1722
            + Q VIAFTY RDG LVSCKYR+ TK FWQE++T KIFYGLDDIKGASDIIIVEGEMDKL
Sbjct: 230  D-QVVIAFTYRRDGALVSCKYRNMTKKFWQEADTLKIFYGLDDIKGASDIIIVEGEMDKL 288

Query: 1721 SMEEAGFKNCVSVPDGAPPKVSDKDLPAEEKDMKYQYLWNCKEYLEKASRIILATDGDPP 1542
            +MEEAGF+NCVSVPDGAPP +SDKDLP  EKD KYQYLWNCKEYLEK SRIILATDGDPP
Sbjct: 289  AMEEAGFRNCVSVPDGAPPSISDKDLPPVEKDTKYQYLWNCKEYLEKTSRIILATDGDPP 348

Query: 1541 GQXXXXXXXXXXXXXRCWRVRWPKKNDVEHFKDANEVLMFLGPAVLREVIENAELYPIRG 1362
            GQ             RCWRV WPKK+ ++HFKDANEVLM LGP  LREVIE AELYPI+G
Sbjct: 349  GQALAEELARRLGRERCWRVTWPKKSTIDHFKDANEVLMCLGPGALREVIEGAELYPIQG 408

Query: 1361 LFNFKDFFVDINAYYHQTIGYELGVSTGWRALDQLYNVVPGELTVVTGVPNSGKSEWIDA 1182
            LFNF ++F +I+AYYHQTIGYELGV TGWR+L+ LYNVVPGELT+VTGVPNSGKSEWIDA
Sbjct: 409  LFNFNNYFTEIDAYYHQTIGYELGVPTGWRSLNHLYNVVPGELTIVTGVPNSGKSEWIDA 468

Query: 1181 LLCNLNQRVGWKFAFCSMENRVREHARKLLEKHVRKPFFDVRYGDSIERMGLEELEEGKV 1002
            LLCNLN  VGWKFA CSMENRVREHARKLLEKH++KPFFDVRYG+S+ERM  +E EEGK 
Sbjct: 469  LLCNLNYSVGWKFALCSMENRVREHARKLLEKHIKKPFFDVRYGESVERMSAQEFEEGKQ 528

Query: 1001 WLNDTFYLIRCENDCLPNINWVLDLARAAILRHGINGLVIDPYNELDHQRPVSQTETEYV 822
            WL+DTF+LIRCENDCLPNI+WVL LA+AA+LRHG+NGLVIDPYNELDHQRP SQTETEYV
Sbjct: 529  WLSDTFFLIRCENDCLPNIDWVLSLAKAAVLRHGVNGLVIDPYNELDHQRPSSQTETEYV 588

Query: 821  SQMLTKIKRFAQHHSCHVWFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNR 642
            SQMLTKIKRFAQHHSCHVWFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNR
Sbjct: 589  SQMLTKIKRFAQHHSCHVWFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNR 648

Query: 641  DPEVGPIDQVQVC 603
            DP  GP+DQVQVC
Sbjct: 649  DPSAGPVDQVQVC 661


>ref|XP_007023031.1| Toprim domain-containing protein isoform 1 [Theobroma cacao]
            gi|508778397|gb|EOY25653.1| Toprim domain-containing
            protein isoform 1 [Theobroma cacao]
          Length = 705

 Score =  962 bits (2487), Expect = 0.0
 Identities = 451/626 (72%), Positives = 524/626 (83%)
 Frame = -2

Query: 2390 RKSRLSYTPHAPIPRPVSLENIEQDVVNSTXXXXXXXXXXXXXLNAESCMPGQHNHLLCP 2211
            R +  S  P A +  PV  + +E   +N               ++  +C+PG+ N LLCP
Sbjct: 76   RTNGFSSIPSANVSAPVYSKELEDRPLNMRSLEILKHKLKQLGIDISACVPGRENRLLCP 135

Query: 2210 MCKGGDSMEMSLSLFVTREGDAAMWTCFRGKCGWKGSTRSFADGKSTYGNLSMISKVKQP 2031
             C GG+S E+SLSLF+ ++G +A W CFR KCGWKG T++FADGK +Y NLS ++KVK  
Sbjct: 136  SCNGGESEEISLSLFINQDGSSASWMCFRAKCGWKGITKAFADGKPSYANLSRVNKVKVK 195

Query: 2030 YREISEESLGLEPLCSELHKYFSERMISGETLRRNSVMQRRYGENQSVIAFTYWRDGVLV 1851
             REI+ ESL LEPLC++L  YF+ERMIS ETL+RN+VMQ++ GE +  IAF YWR G LV
Sbjct: 196  -REITVESLQLEPLCNQLIAYFAERMISAETLKRNAVMQKKSGE-EIAIAFPYWRKGSLV 253

Query: 1850 SCKYRDSTKNFWQESNTEKIFYGLDDIKGASDIIIVEGEMDKLSMEEAGFKNCVSVPDGA 1671
            +CKYRD  K FWQE +TEKIFYGLDDI+ ASDIIIVEGE+DKL+MEEAGF+NCVSVPDGA
Sbjct: 254  NCKYRDIAKRFWQEKDTEKIFYGLDDIEDASDIIIVEGEIDKLAMEEAGFRNCVSVPDGA 313

Query: 1670 PPKVSDKDLPAEEKDMKYQYLWNCKEYLEKASRIILATDGDPPGQXXXXXXXXXXXXXRC 1491
            PP VS K++PAEE+D KYQYLWNCKEYL+KASRIILATDGDPPGQ             RC
Sbjct: 314  PPSVSSKEVPAEEQDTKYQYLWNCKEYLKKASRIILATDGDPPGQALAEELARRLGRERC 373

Query: 1490 WRVRWPKKNDVEHFKDANEVLMFLGPAVLREVIENAELYPIRGLFNFKDFFVDINAYYHQ 1311
            WRV+WPKKN+V+HFKDANEVLM+LGP+VL++VIENAELYPIRGLFNF+DFF +I+ YYH+
Sbjct: 374  WRVKWPKKNEVDHFKDANEVLMYLGPSVLKDVIENAELYPIRGLFNFRDFFDEIDRYYHR 433

Query: 1310 TIGYELGVSTGWRALDQLYNVVPGELTVVTGVPNSGKSEWIDALLCNLNQRVGWKFAFCS 1131
            T+GYE GV TGWRALD LYNVVPGELTVVTGVPNSGKSEWIDALLCNLN+ VGWKFA CS
Sbjct: 434  TLGYEFGVPTGWRALDGLYNVVPGELTVVTGVPNSGKSEWIDALLCNLNESVGWKFALCS 493

Query: 1130 MENRVREHARKLLEKHVRKPFFDVRYGDSIERMGLEELEEGKVWLNDTFYLIRCENDCLP 951
            MEN+VR+HARKLLEK +RKPFFD  YG S+ERM +EELE+GK WL+DTFYL+RCEND LP
Sbjct: 494  MENKVRDHARKLLEKCIRKPFFDTSYGSSVERMSVEELEKGKKWLSDTFYLVRCENDSLP 553

Query: 950  NINWVLDLARAAILRHGINGLVIDPYNELDHQRPVSQTETEYVSQMLTKIKRFAQHHSCH 771
            +I WVLDLA+AA+LRHG+ GL+IDPYNELDHQRPVSQTETEYVSQMLTKIKRFAQHHSCH
Sbjct: 554  SIKWVLDLAKAAVLRHGVRGLLIDPYNELDHQRPVSQTETEYVSQMLTKIKRFAQHHSCH 613

Query: 770  VWFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDPEVGPIDQVQVCVRKV 591
            VWFVAHPRQLHHW+G PPNLYDISGSAHFINKCDNGIVIHRNRDPE GP+DQVQVCVRKV
Sbjct: 614  VWFVAHPRQLHHWIGAPPNLYDISGSAHFINKCDNGIVIHRNRDPEAGPVDQVQVCVRKV 673

Query: 590  RNKVIGTIGEAWLSYNRVTGEYMDVD 513
            RNKV+GTIG+A+LSY+RVTG Y D+D
Sbjct: 674  RNKVVGTIGDAFLSYDRVTGVYTDID 699


>ref|XP_010243933.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            [Nelumbo nucifera]
          Length = 769

 Score =  953 bits (2463), Expect = 0.0
 Identities = 474/745 (63%), Positives = 566/745 (75%), Gaps = 21/745 (2%)
 Frame = -2

Query: 2684 PGQLQLPASSTSLKQQEHRP*QLLGDMHLVPR-YRHLFNNSNNFIMAGSKHLVFLKSSLF 2508
            PG L+ P  S   K  E++  Q      +V   +R L    ++ I+ GSK+L  L+S+ F
Sbjct: 31   PGDLK-PFVSWPWKLVENQKVQSRASSQMVLHPHRPLHTLLSSNILMGSKNL--LRSAPF 87

Query: 2507 FHTLTPPKAAKFYSQTYPFAAKKLVFSTILAKPTS---PIFCRKSRLSYTPHAPIPRPVS 2337
               ++       +S+ + F   +L+FST   KP S    +  +KS   Y  +A +PRPV 
Sbjct: 88   TIPIS-------FSRLHHFHTYRLLFSTSPPKPISIFHHLIVKKSGFCYMSYARVPRPVH 140

Query: 2336 LENIEQDVVNSTXXXXXXXXXXXXXLNAESCMPGQHNHLLCPMCKGGDSMEMSLSLFVTR 2157
            ++  E++ ++S              ++  SC PGQ+NHL+CP C+GGDSME SLSL +T+
Sbjct: 141  MDYPEEETIDSIRLNALKKRLEMIGIDCTSCRPGQYNHLICPKCEGGDSMERSLSLLITQ 200

Query: 2156 EGDAAMWTCFRGKCGWKGSTRSFADGKSTYGNLSMISKVKQPYREISEESLGLEPLCSEL 1977
            +G +AMWTCFR KCGW+G  ++F DG++ +G  ++I KV  P REISEESLGLEPLC EL
Sbjct: 201  DGGSAMWTCFRAKCGWRGGAQAFPDGRA-FGGANLIPKV-MPKREISEESLGLEPLCDEL 258

Query: 1976 HKYFSERMISGETLRRNSVMQRR-----------------YGENQSVIAFTYWRDGVLVS 1848
              YF+ERMISGETLRRN+VMQ+                  +G  +  IAFTY ++G LVS
Sbjct: 259  LAYFAERMISGETLRRNAVMQKSGKQVCGAIDGKKLSLSSHGNTKIAIAFTYRQNGKLVS 318

Query: 1847 CKYRDSTKNFWQESNTEKIFYGLDDIKGASDIIIVEGEMDKLSMEEAGFKNCVSVPDGAP 1668
            CKYR   K FWQE +TEKI YGLDDIK  SDIIIVEGE+DKLSMEEAGF+NCVSVPDGAP
Sbjct: 319  CKYRGVDKVFWQEKDTEKILYGLDDIKQTSDIIIVEGEIDKLSMEEAGFRNCVSVPDGAP 378

Query: 1667 PKVSDKDLPAEEKDMKYQYLWNCKEYLEKASRIILATDGDPPGQXXXXXXXXXXXXXRCW 1488
             KVS K+LP+ EKD KYQYLWNCKEYL+KASRIILATD DPPGQ             RCW
Sbjct: 379  AKVSTKELPSIEKDTKYQYLWNCKEYLDKASRIILATDADPPGQALAEELARRLGRERCW 438

Query: 1487 RVRWPKKNDVEHFKDANEVLMFLGPAVLREVIENAELYPIRGLFNFKDFFVDINAYYHQT 1308
            RVRWPKK+     KDANEVL + GP  L+EVIENAELYPIRGLFNFKD+F +I++YYH +
Sbjct: 439  RVRWPKKDGGNVCKDANEVLSYYGPDALKEVIENAELYPIRGLFNFKDYFDEIDSYYHCS 498

Query: 1307 IGYELGVSTGWRALDQLYNVVPGELTVVTGVPNSGKSEWIDALLCNLNQRVGWKFAFCSM 1128
             GYELGVSTGWRAL+ LYNVVPGELT+VTGVPNSGKSEWIDALLCNLN+  GWKFA CSM
Sbjct: 499  FGYELGVSTGWRALNNLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNESDGWKFALCSM 558

Query: 1127 ENRVREHARKLLEKHVRKPFFDVRYGDSIERMGLEELEEGKVWLNDTFYLIRCENDCLPN 948
            EN+VREHARKLLEKH++KPFF  RYG+S+ERM +EELE GK WLNDTFYLIRCE+DCLP+
Sbjct: 559  ENKVREHARKLLEKHLKKPFFSARYGESMERMSVEELELGKEWLNDTFYLIRCEDDCLPS 618

Query: 947  INWVLDLARAAILRHGINGLVIDPYNELDHQRPVSQTETEYVSQMLTKIKRFAQHHSCHV 768
            + WVL+LA+A +LRHG+ GLVIDPYNELDHQRP +QTETEYVSQMLTKIKRFAQHH+CHV
Sbjct: 619  VKWVLELAKAVVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHHACHV 678

Query: 767  WFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDPEVGPIDQVQVCVRKVR 588
            WFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDP+ GP+DQVQ+CVRK+R
Sbjct: 679  WFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDPQAGPLDQVQICVRKIR 738

Query: 587  NKVIGTIGEAWLSYNRVTGEYMDVD 513
            NKVIG IG+A+LSYNR TGE+ D+D
Sbjct: 739  NKVIGNIGDAFLSYNRTTGEFKDID 763


>ref|XP_010053033.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            [Eucalyptus grandis] gi|629112311|gb|KCW77271.1|
            hypothetical protein EUGRSUZ_D01628 [Eucalyptus grandis]
          Length = 720

 Score =  952 bits (2460), Expect = 0.0
 Identities = 451/631 (71%), Positives = 528/631 (83%)
 Frame = -2

Query: 2405 SPIFCRKSRLSYTPHAPIPRPVSLENIEQDVVNSTXXXXXXXXXXXXXLNAESCMPGQHN 2226
            +P   + + + + PH+ IPRPV LE      +  T             ++ ++C+PGQ++
Sbjct: 87   NPSCLKANGVPHRPHSSIPRPVQLEGPVGRGIE-TPLKVLKMRLEELGIDMQTCLPGQYH 145

Query: 2225 HLLCPMCKGGDSMEMSLSLFVTREGDAAMWTCFRGKCGWKGSTRSFADGKSTYGNLSMIS 2046
             LLCPMCKGG SME SLS+FV+ +G +A+WTCFRG CGWKGSTR+ A  +S+Y   +  S
Sbjct: 146  SLLCPMCKGGRSMERSLSIFVSPDGGSAVWTCFRGSCGWKGSTRAAAKPRSSYATSNQTS 205

Query: 2045 KVKQPYREISEESLGLEPLCSELHKYFSERMISGETLRRNSVMQRRYGENQSVIAFTYWR 1866
            KVK   REISEESLGLEPLC+EL  YF+ER+IS ETLRRN+VMQ++  ENQ VIAFTY R
Sbjct: 206  KVKT-IREISEESLGLEPLCNELVAYFAERLISAETLRRNAVMQKKC-ENQIVIAFTYRR 263

Query: 1865 DGVLVSCKYRDSTKNFWQESNTEKIFYGLDDIKGASDIIIVEGEMDKLSMEEAGFKNCVS 1686
            +G LVSCKYRD  K FWQE++TEKIFYGLDDIKG S+IIIVEGEMDKL+MEEAGF+NCVS
Sbjct: 264  EGKLVSCKYRDVKKKFWQEAHTEKIFYGLDDIKGKSEIIIVEGEMDKLAMEEAGFRNCVS 323

Query: 1685 VPDGAPPKVSDKDLPAEEKDMKYQYLWNCKEYLEKASRIILATDGDPPGQXXXXXXXXXX 1506
            VPDGAPP  SDKDLP E +D+KYQYLWNCK+YL++ASRIILATDGD PGQ          
Sbjct: 324  VPDGAPPSTSDKDLPPEGQDIKYQYLWNCKDYLKEASRIILATDGDKPGQALAEELARRL 383

Query: 1505 XXXRCWRVRWPKKNDVEHFKDANEVLMFLGPAVLREVIENAELYPIRGLFNFKDFFVDIN 1326
               RCWRV+WPKKND E+FKDANEVLM++GP VLREVI++AELYPIRGLF FKDFF +IN
Sbjct: 384  GRERCWRVKWPKKNDSEYFKDANEVLMYVGPGVLREVIDDAELYPIRGLFTFKDFFDEIN 443

Query: 1325 AYYHQTIGYELGVSTGWRALDQLYNVVPGELTVVTGVPNSGKSEWIDALLCNLNQRVGWK 1146
             YYH+T+GYE GVSTGW++L+ LYNVVPGELT+VTGVPNSGKSEWIDALLCN+N+ VGWK
Sbjct: 444  GYYHRTLGYEFGVSTGWKSLNHLYNVVPGELTIVTGVPNSGKSEWIDALLCNINESVGWK 503

Query: 1145 FAFCSMENRVREHARKLLEKHVRKPFFDVRYGDSIERMGLEELEEGKVWLNDTFYLIRCE 966
            FA CSMENRVREHARKLLEKH++KPFFD +YG+  ERM +E+ E GK WL+DTFYLIRCE
Sbjct: 504  FALCSMENRVREHARKLLEKHIKKPFFDSKYGEPAERMSVEDFERGKRWLSDTFYLIRCE 563

Query: 965  NDCLPNINWVLDLARAAILRHGINGLVIDPYNELDHQRPVSQTETEYVSQMLTKIKRFAQ 786
            +D LP+I WVLDLA++A+LRHG+ GLVIDPYNELDHQRP  QTETEYVSQMLT I+RFAQ
Sbjct: 564  DDSLPSIKWVLDLAKSAVLRHGVRGLVIDPYNELDHQRPSGQTETEYVSQMLTLIRRFAQ 623

Query: 785  HHSCHVWFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDPEVGPIDQVQV 606
            HHSCHVWFVAHPRQLH+WVG PPNLYDISGSAHFINKCDNGIVIHRNRDPE GP+DQVQV
Sbjct: 624  HHSCHVWFVAHPRQLHNWVGEPPNLYDISGSAHFINKCDNGIVIHRNRDPEAGPVDQVQV 683

Query: 605  CVRKVRNKVIGTIGEAWLSYNRVTGEYMDVD 513
            CVRKVRNKV GTIG+A+L+YNRVTGE++D+D
Sbjct: 684  CVRKVRNKVAGTIGDAFLNYNRVTGEFIDLD 714


>ref|XP_007023033.1| Toprim domain-containing protein isoform 3 [Theobroma cacao]
            gi|508778399|gb|EOY25655.1| Toprim domain-containing
            protein isoform 3 [Theobroma cacao]
          Length = 712

 Score =  949 bits (2453), Expect = 0.0
 Identities = 445/617 (72%), Positives = 517/617 (83%)
 Frame = -2

Query: 2390 RKSRLSYTPHAPIPRPVSLENIEQDVVNSTXXXXXXXXXXXXXLNAESCMPGQHNHLLCP 2211
            R +  S  P A +  PV  + +E   +N               ++  +C+PG+ N LLCP
Sbjct: 76   RTNGFSSIPSANVSAPVYSKELEDRPLNMRSLEILKHKLKQLGIDISACVPGRENRLLCP 135

Query: 2210 MCKGGDSMEMSLSLFVTREGDAAMWTCFRGKCGWKGSTRSFADGKSTYGNLSMISKVKQP 2031
             C GG+S E+SLSLF+ ++G +A W CFR KCGWKG T++FADGK +Y NLS ++KVK  
Sbjct: 136  SCNGGESEEISLSLFINQDGSSASWMCFRAKCGWKGITKAFADGKPSYANLSRVNKVKVK 195

Query: 2030 YREISEESLGLEPLCSELHKYFSERMISGETLRRNSVMQRRYGENQSVIAFTYWRDGVLV 1851
             REI+ ESL LEPLC++L  YF+ERMIS ETL+RN+VMQ++ GE +  IAF YWR G LV
Sbjct: 196  -REITVESLQLEPLCNQLIAYFAERMISAETLKRNAVMQKKSGE-EIAIAFPYWRKGSLV 253

Query: 1850 SCKYRDSTKNFWQESNTEKIFYGLDDIKGASDIIIVEGEMDKLSMEEAGFKNCVSVPDGA 1671
            +CKYRD  K FWQE +TEKIFYGLDDI+ ASDIIIVEGE+DKL+MEEAGF+NCVSVPDGA
Sbjct: 254  NCKYRDIAKRFWQEKDTEKIFYGLDDIEDASDIIIVEGEIDKLAMEEAGFRNCVSVPDGA 313

Query: 1670 PPKVSDKDLPAEEKDMKYQYLWNCKEYLEKASRIILATDGDPPGQXXXXXXXXXXXXXRC 1491
            PP VS K++PAEE+D KYQYLWNCKEYL+KASRIILATDGDPPGQ             RC
Sbjct: 314  PPSVSSKEVPAEEQDTKYQYLWNCKEYLKKASRIILATDGDPPGQALAEELARRLGRERC 373

Query: 1490 WRVRWPKKNDVEHFKDANEVLMFLGPAVLREVIENAELYPIRGLFNFKDFFVDINAYYHQ 1311
            WRV+WPKKN+V+HFKDANEVLM+LGP+VL++VIENAELYPIRGLFNF+DFF +I+ YYH+
Sbjct: 374  WRVKWPKKNEVDHFKDANEVLMYLGPSVLKDVIENAELYPIRGLFNFRDFFDEIDRYYHR 433

Query: 1310 TIGYELGVSTGWRALDQLYNVVPGELTVVTGVPNSGKSEWIDALLCNLNQRVGWKFAFCS 1131
            T+GYE GV TGWRALD LYNVVPGELTVVTGVPNSGKSEWIDALLCNLN+ VGWKFA CS
Sbjct: 434  TLGYEFGVPTGWRALDGLYNVVPGELTVVTGVPNSGKSEWIDALLCNLNESVGWKFALCS 493

Query: 1130 MENRVREHARKLLEKHVRKPFFDVRYGDSIERMGLEELEEGKVWLNDTFYLIRCENDCLP 951
            MEN+VR+HARKLLEK +RKPFFD  YG S+ERM +EELE+GK WL+DTFYL+RCEND LP
Sbjct: 494  MENKVRDHARKLLEKCIRKPFFDTSYGSSVERMSVEELEKGKKWLSDTFYLVRCENDSLP 553

Query: 950  NINWVLDLARAAILRHGINGLVIDPYNELDHQRPVSQTETEYVSQMLTKIKRFAQHHSCH 771
            +I WVLDLA+AA+LRHG+ GL+IDPYNELDHQRPVSQTETEYVSQMLTKIKRFAQHHSCH
Sbjct: 554  SIKWVLDLAKAAVLRHGVRGLLIDPYNELDHQRPVSQTETEYVSQMLTKIKRFAQHHSCH 613

Query: 770  VWFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDPEVGPIDQVQVCVRKV 591
            VWFVAHPRQLHHW+G PPNLYDISGSAHFINKCDNGIVIHRNRDPE GP+DQVQVCVRKV
Sbjct: 614  VWFVAHPRQLHHWIGAPPNLYDISGSAHFINKCDNGIVIHRNRDPEAGPVDQVQVCVRKV 673

Query: 590  RNKVIGTIGEAWLSYNR 540
            RNKV+GTIG+A+LSY+R
Sbjct: 674  RNKVVGTIGDAFLSYDR 690


>ref|XP_008225676.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            [Prunus mume]
          Length = 698

 Score =  945 bits (2443), Expect = 0.0
 Identities = 461/692 (66%), Positives = 542/692 (78%), Gaps = 3/692 (0%)
 Frame = -2

Query: 2576 FNNSNNFIMAGSKHLVFLKSSLFFHTLTPPKAAKFYSQTYPFAAKKLVFSTILAKP---T 2406
            F  S+  ++ G+  L   KS+   + LTP       SQ + F + +LVFS +  KP   T
Sbjct: 14   FLTSSAGLLMGTVQL--FKSTPCPNPLTP-------SQRHSFHSHRLVFSPLSPKPMSKT 64

Query: 2405 SPIFCRKSRLSYTPHAPIPRPVSLENIEQDVVNSTXXXXXXXXXXXXXLNAESCMPGQHN 2226
             P+  R +  SY  HA    P  LEN E+  V+               ++   CMPGQ+N
Sbjct: 65   RPLCLRTNGYSYVSHANGAAPAELENAEEKRVDFNQLSRLKLKLEMLGIDYGICMPGQYN 124

Query: 2225 HLLCPMCKGGDSMEMSLSLFVTREGDAAMWTCFRGKCGWKGSTRSFADGKSTYGNLSMIS 2046
            HL+CP+CKGGDS E SLS++++ +  +A W CFRGKCGW+G T +  D K +    + I+
Sbjct: 125  HLICPICKGGDSEEKSLSVYISEDWGSAFWCCFRGKCGWQGRTTAVGDNKLSRETSNQIA 184

Query: 2045 KVKQPYREISEESLGLEPLCSELHKYFSERMISGETLRRNSVMQRRYGENQSVIAFTYWR 1866
            KVK+  REI+ ESLGLEPLC EL  YFSER IS ETLRRN+VMQ+  G  Q  IAF YWR
Sbjct: 185  KVKKK-REITVESLGLEPLCEELVAYFSERSISTETLRRNAVMQKTTGV-QICIAFPYWR 242

Query: 1865 DGVLVSCKYRDSTKNFWQESNTEKIFYGLDDIKGASDIIIVEGEMDKLSMEEAGFKNCVS 1686
            DG+LVSCKYRD  K FWQE +TE+IFYGLDDIKG +DIIIVEGE+DKL+MEEAGF NCVS
Sbjct: 243  DGMLVSCKYRDIEKKFWQEKDTERIFYGLDDIKGTNDIIIVEGEIDKLAMEEAGFHNCVS 302

Query: 1685 VPDGAPPKVSDKDLPAEEKDMKYQYLWNCKEYLEKASRIILATDGDPPGQXXXXXXXXXX 1506
            VPDGAP KVS KDLPAEE+D KYQYLWNCKEYL+KASRIILATDGD PGQ          
Sbjct: 303  VPDGAPAKVSSKDLPAEEQDTKYQYLWNCKEYLKKASRIILATDGDEPGQALAEELARRL 362

Query: 1505 XXXRCWRVRWPKKNDVEHFKDANEVLMFLGPAVLREVIENAELYPIRGLFNFKDFFVDIN 1326
               RCWRVRWP KND EHFKDANEVLM+LGP VL+EVIENAELYPIRGLFNF ++F +++
Sbjct: 363  GRERCWRVRWPMKNDNEHFKDANEVLMYLGPDVLKEVIENAELYPIRGLFNFANYFDELD 422

Query: 1325 AYYHQTIGYELGVSTGWRALDQLYNVVPGELTVVTGVPNSGKSEWIDALLCNLNQRVGWK 1146
            AYY++T+GYE GVSTGW+ L++LYN+VPGELT+VTGVPNSGKSEWIDALLCNL++ VGWK
Sbjct: 423  AYYYRTLGYEYGVSTGWKGLNELYNIVPGELTIVTGVPNSGKSEWIDALLCNLSESVGWK 482

Query: 1145 FAFCSMENRVREHARKLLEKHVRKPFFDVRYGDSIERMGLEELEEGKVWLNDTFYLIRCE 966
            FA CSMEN+VREHARKLLEKH++KPFFD RYG S ERM  EE E+GK WLNDTFYLIRCE
Sbjct: 483  FALCSMENKVREHARKLLEKHIKKPFFDKRYGGSAERMSAEEFEQGKQWLNDTFYLIRCE 542

Query: 965  NDCLPNINWVLDLARAAILRHGINGLVIDPYNELDHQRPVSQTETEYVSQMLTKIKRFAQ 786
            +D LP+I+WVL+LA+AA+LRHG+ GLVIDPYNELDHQRP +QTETEYVSQMLTK+KRFAQ
Sbjct: 543  DDSLPSISWVLELAQAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKVKRFAQ 602

Query: 785  HHSCHVWFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDPEVGPIDQVQV 606
            HH CHVWFVAHPRQLH WVGGPPNLYDISGSAHFINKCDNGIVIHRNRDP  G +DQVQV
Sbjct: 603  HHCCHVWFVAHPRQLHQWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDPGAGVLDQVQV 662

Query: 605  CVRKVRNKVIGTIGEAWLSYNRVTGEYMDVDV 510
            CVRKVRNKV GTIG+A+L+Y+R TG++ D+ +
Sbjct: 663  CVRKVRNKVAGTIGDAYLTYDRATGQFKDIGI 694


>ref|XP_012075515.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            [Jatropha curcas]
          Length = 698

 Score =  939 bits (2428), Expect = 0.0
 Identities = 457/684 (66%), Positives = 531/684 (77%), Gaps = 4/684 (0%)
 Frame = -2

Query: 2552 MAGSKHLVFLKSSLFFHTLTPPKAAK---FYSQTYPFAAKKLVFSTILAKPTSPIFCRKS 2382
            +  S +L+ + S  FF   T P  +    F S   P+   K +     +KP S I   K+
Sbjct: 20   LPSSINLLHMGSKFFFKPATLPSLSPPPPFSSTRNPYHTFKRLLPVACSKPISKIPPYKA 79

Query: 2381 RLSYTPHAPIPRPVSLENIEQDVVNSTXXXXXXXXXXXXXLNAESCMPGQHNHLLCPMCK 2202
               +T  A +P PV  E  +   +N                N    +PGQHNHLLCP C 
Sbjct: 80   N-GFTSQATVPTPVYGEEEDLQTLNLKLLKGKLEELGIEMDNF---VPGQHNHLLCPRCY 135

Query: 2201 GGDSMEMSLSLFVTREGDAAMWTCFRGKCGWKGSTRSFADGKSTYGNLSMISKVK-QPYR 2025
            GGDS E +L+LF+  +G  A W CFRGKCGW G TR +A   S +  +S I + K +  R
Sbjct: 136  GGDSREKTLALFINPDGSGASWNCFRGKCGWNGGTRPYAIPGSNFTFVSPIQEKKVKKNR 195

Query: 2024 EISEESLGLEPLCSELHKYFSERMISGETLRRNSVMQRRYGENQSVIAFTYWRDGVLVSC 1845
            EI+E+SL LEP C EL  YF+ER+I+ +TL+RN VMQR YG NQ  IAFTYWR+GVL SC
Sbjct: 196  EITEKSLELEPPCDELLCYFAERLITKKTLQRNRVMQRSYG-NQICIAFTYWRNGVLTSC 254

Query: 1844 KYRDSTKNFWQESNTEKIFYGLDDIKGASDIIIVEGEMDKLSMEEAGFKNCVSVPDGAPP 1665
            KYRDSTK FWQE +TEKIFYGLDDIKGA +IIIVEGEMDKL+MEEAGF NCVSVPDGAPP
Sbjct: 255  KYRDSTKRFWQEKDTEKIFYGLDDIKGADEIIIVEGEMDKLAMEEAGFLNCVSVPDGAPP 314

Query: 1664 KVSDKDLPAEEKDMKYQYLWNCKEYLEKASRIILATDGDPPGQXXXXXXXXXXXXXRCWR 1485
             +S KDLP ++KD KYQYLWNCKEYL++ASRIILATDGD PG+             RCWR
Sbjct: 315  SISSKDLPPKDKDTKYQYLWNCKEYLKRASRIILATDGDQPGKALAEEIARRVGRERCWR 374

Query: 1484 VRWPKKNDVEHFKDANEVLMFLGPAVLREVIENAELYPIRGLFNFKDFFVDINAYYHQTI 1305
            V WP+KN  E+FKDANEVLMFLGP  LR+VIENAELYPIRGLF+FKDFF +I+AYYH+T+
Sbjct: 375  VSWPRKNKDEYFKDANEVLMFLGPTALRDVIENAELYPIRGLFSFKDFFGEIDAYYHRTL 434

Query: 1304 GYELGVSTGWRALDQLYNVVPGELTVVTGVPNSGKSEWIDALLCNLNQRVGWKFAFCSME 1125
            GYE+G STGW+AL+ LY VVPGELT+V+GVPNSGKSEWIDALLCNLN+  GWKFA CSME
Sbjct: 435  GYEMGASTGWKALNGLYKVVPGELTIVSGVPNSGKSEWIDALLCNLNRSEGWKFALCSME 494

Query: 1124 NRVREHARKLLEKHVRKPFFDVRYGDSIERMGLEELEEGKVWLNDTFYLIRCENDCLPNI 945
            N+VREHARKLLEKH++KPFFD +YG + ERM +E+ EEGK WLNDTFYLIRCE+D LP+I
Sbjct: 495  NKVREHARKLLEKHIKKPFFDAQYGGTAERMTVEDFEEGKQWLNDTFYLIRCEDDKLPSI 554

Query: 944  NWVLDLARAAILRHGINGLVIDPYNELDHQRPVSQTETEYVSQMLTKIKRFAQHHSCHVW 765
            NWVLDLA+AA+LRHG++GLVIDPYNELDHQRP+S TETEYVSQMLT +KRFAQHHSCH+W
Sbjct: 555  NWVLDLAKAAVLRHGVHGLVIDPYNELDHQRPISMTETEYVSQMLTLVKRFAQHHSCHIW 614

Query: 764  FVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDPEVGPIDQVQVCVRKVRN 585
            FVAHPRQLHHWVG PPNLYDISGSAHFINKCDNGIVIHRNRDP  GP+DQVQVCVRKVRN
Sbjct: 615  FVAHPRQLHHWVGAPPNLYDISGSAHFINKCDNGIVIHRNRDPHAGPLDQVQVCVRKVRN 674

Query: 584  KVIGTIGEAWLSYNRVTGEYMDVD 513
            KV+GTIGEA LSYNRVTGE+MD+D
Sbjct: 675  KVVGTIGEAVLSYNRVTGEFMDID 698


>ref|XP_007023032.1| Toprim domain-containing protein isoform 2 [Theobroma cacao]
            gi|508778398|gb|EOY25654.1| Toprim domain-containing
            protein isoform 2 [Theobroma cacao]
          Length = 682

 Score =  938 bits (2425), Expect = 0.0
 Identities = 440/609 (72%), Positives = 509/609 (83%)
 Frame = -2

Query: 2390 RKSRLSYTPHAPIPRPVSLENIEQDVVNSTXXXXXXXXXXXXXLNAESCMPGQHNHLLCP 2211
            R +  S  P A +  PV  + +E   +N               ++  +C+PG+ N LLCP
Sbjct: 76   RTNGFSSIPSANVSAPVYSKELEDRPLNMRSLEILKHKLKQLGIDISACVPGRENRLLCP 135

Query: 2210 MCKGGDSMEMSLSLFVTREGDAAMWTCFRGKCGWKGSTRSFADGKSTYGNLSMISKVKQP 2031
             C GG+S E+SLSLF+ ++G +A W CFR KCGWKG T++FADGK +Y NLS ++KVK  
Sbjct: 136  SCNGGESEEISLSLFINQDGSSASWMCFRAKCGWKGITKAFADGKPSYANLSRVNKVKVK 195

Query: 2030 YREISEESLGLEPLCSELHKYFSERMISGETLRRNSVMQRRYGENQSVIAFTYWRDGVLV 1851
             REI+ ESL LEPLC++L  YF+ERMIS ETL+RN+VMQ++ GE +  IAF YWR G LV
Sbjct: 196  -REITVESLQLEPLCNQLIAYFAERMISAETLKRNAVMQKKSGE-EIAIAFPYWRKGSLV 253

Query: 1850 SCKYRDSTKNFWQESNTEKIFYGLDDIKGASDIIIVEGEMDKLSMEEAGFKNCVSVPDGA 1671
            +CKYRD  K FWQE +TEKIFYGLDDI+ ASDIIIVEGE+DKL+MEEAGF+NCVSVPDGA
Sbjct: 254  NCKYRDIAKRFWQEKDTEKIFYGLDDIEDASDIIIVEGEIDKLAMEEAGFRNCVSVPDGA 313

Query: 1670 PPKVSDKDLPAEEKDMKYQYLWNCKEYLEKASRIILATDGDPPGQXXXXXXXXXXXXXRC 1491
            PP VS K++PAEE+D KYQYLWNCKEYL+KASRIILATDGDPPGQ             RC
Sbjct: 314  PPSVSSKEVPAEEQDTKYQYLWNCKEYLKKASRIILATDGDPPGQALAEELARRLGRERC 373

Query: 1490 WRVRWPKKNDVEHFKDANEVLMFLGPAVLREVIENAELYPIRGLFNFKDFFVDINAYYHQ 1311
            WRV+WPKKN+V+HFKDANEVLM+LGP+VL++VIENAELYPIRGLFNF+DFF +I+ YYH+
Sbjct: 374  WRVKWPKKNEVDHFKDANEVLMYLGPSVLKDVIENAELYPIRGLFNFRDFFDEIDRYYHR 433

Query: 1310 TIGYELGVSTGWRALDQLYNVVPGELTVVTGVPNSGKSEWIDALLCNLNQRVGWKFAFCS 1131
            T+GYE GV TGWRALD LYNVVPGELTVVTGVPNSGKSEWIDALLCNLN+ VGWKFA CS
Sbjct: 434  TLGYEFGVPTGWRALDGLYNVVPGELTVVTGVPNSGKSEWIDALLCNLNESVGWKFALCS 493

Query: 1130 MENRVREHARKLLEKHVRKPFFDVRYGDSIERMGLEELEEGKVWLNDTFYLIRCENDCLP 951
            MEN+VR+HARKLLEK +RKPFFD  YG S+ERM +EELE+GK WL+DTFYL+RCEND LP
Sbjct: 494  MENKVRDHARKLLEKCIRKPFFDTSYGSSVERMSVEELEKGKKWLSDTFYLVRCENDSLP 553

Query: 950  NINWVLDLARAAILRHGINGLVIDPYNELDHQRPVSQTETEYVSQMLTKIKRFAQHHSCH 771
            +I WVLDLA+AA+LRHG+ GL+IDPYNELDHQRPVSQTETEYVSQMLTKIKRFAQHHSCH
Sbjct: 554  SIKWVLDLAKAAVLRHGVRGLLIDPYNELDHQRPVSQTETEYVSQMLTKIKRFAQHHSCH 613

Query: 770  VWFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDPEVGPIDQVQVCVRKV 591
            VWFVAHPRQLHHW+G PPNLYDISGSAHFINKCDNGIVIHRNRDPE GP+DQVQVCVRKV
Sbjct: 614  VWFVAHPRQLHHWIGAPPNLYDISGSAHFINKCDNGIVIHRNRDPEAGPVDQVQVCVRKV 673

Query: 590  RNKVIGTIG 564
            RNKV+GTIG
Sbjct: 674  RNKVVGTIG 682


>ref|XP_002268852.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            [Vitis vinifera] gi|297740887|emb|CBI31069.3| unnamed
            protein product [Vitis vinifera]
          Length = 705

 Score =  937 bits (2423), Expect = 0.0
 Identities = 470/722 (65%), Positives = 546/722 (75%), Gaps = 3/722 (0%)
 Frame = -2

Query: 2669 LPASSTSLKQQEHRP*QLLGDMHLVPRYRHLFNNSNNFIMAGSKHLVFLKSSLFFHTLTP 2490
            +P S   LK +   P      M L+ + R + ++S   +MA SKHL+    S      T 
Sbjct: 1    MPFSPLFLKLRVSDP-----QMLLLQQQRLVISSSRTILMA-SKHLLKPTPS------TL 48

Query: 2489 PKAAKFYSQTYPFAAKKLVFSTILAKPTS---PIFCRKSRLSYTPHAPIPRPVSLENIEQ 2319
            P      S          + S    KP S   PI  +   L YT H+ +P PV  EN E 
Sbjct: 49   PLKLNLSSPG--------IISAFPLKPNSRILPISLKTFALPYTSHSNVPGPVYSENPED 100

Query: 2318 DVVNSTXXXXXXXXXXXXXLNAESCMPGQHNHLLCPMCKGGDSMEMSLSLFVTREGDAAM 2139
               +S               + +    GQ++HL CP CKGGDSME SLSLF+T +GD A+
Sbjct: 101  TSNSSARLNVLKKKLEVIGFDTQMLKTGQYSHLTCPTCKGGDSMEKSLSLFITLDGDHAV 160

Query: 2138 WTCFRGKCGWKGSTRSFADGKSTYGNLSMISKVKQPYREISEESLGLEPLCSELHKYFSE 1959
            W C RGKCG +G+ R+F +  S+YG L+ I+K+K P REI+EESLGL+PLCSEL  YF E
Sbjct: 161  WMCHRGKCGSRGNIRAFVNDSSSYGRLNQITKIK-PKREITEESLGLKPLCSELVAYFGE 219

Query: 1958 RMISGETLRRNSVMQRRYGENQSVIAFTYWRDGVLVSCKYRDSTKNFWQESNTEKIFYGL 1779
            RMIS +TL RNSVMQ+ YG+ Q +IAFTY R+GVLVSCKYRD  KNFWQE +TEKIFYG+
Sbjct: 220  RMISEKTLARNSVMQKSYGD-QFIIAFTYRRNGVLVSCKYRDVNKNFWQEKDTEKIFYGV 278

Query: 1778 DDIKGASDIIIVEGEMDKLSMEEAGFKNCVSVPDGAPPKVSDKDLPAEEKDMKYQYLWNC 1599
            DDIK ASDIIIVEGE+DKLSMEEAGF NCVSVPDGAPP VS K   + EKD+KYQYLWNC
Sbjct: 279  DDIKEASDIIIVEGEIDKLSMEEAGFYNCVSVPDGAPPSVSTKVFESAEKDIKYQYLWNC 338

Query: 1598 KEYLEKASRIILATDGDPPGQXXXXXXXXXXXXXRCWRVRWPKKNDVEHFKDANEVLMFL 1419
            KEYLEKASRIILATDGD PG              RCWRV+WPKKN+VEHFKDANEVLM+L
Sbjct: 339  KEYLEKASRIILATDGDAPGLALAEELARRLGRERCWRVKWPKKNEVEHFKDANEVLMYL 398

Query: 1418 GPAVLREVIENAELYPIRGLFNFKDFFVDINAYYHQTIGYELGVSTGWRALDQLYNVVPG 1239
            GP VL+EVIENAE+YPI+GLFNF  +F +I+ YYH T+G+ELGVSTGWR L+ LYNVVPG
Sbjct: 399  GPDVLKEVIENAEIYPIQGLFNFSHYFNEIDGYYHHTLGFELGVSTGWRGLNGLYNVVPG 458

Query: 1238 ELTVVTGVPNSGKSEWIDALLCNLNQRVGWKFAFCSMENRVREHARKLLEKHVRKPFFDV 1059
            ELTVVTGVPNSGKSEWIDALLCN+N+ VGW FA CSMEN+VREHARKLLEKH++KPFF  
Sbjct: 459  ELTVVTGVPNSGKSEWIDALLCNINRSVGWSFALCSMENKVREHARKLLEKHIKKPFFKA 518

Query: 1058 RYGDSIERMGLEELEEGKVWLNDTFYLIRCENDCLPNINWVLDLARAAILRHGINGLVID 879
             YG+SIERM +EE E GK WL++TFYLIRCE D LPNI WVLDLA++A+LRHG+ GLVID
Sbjct: 519  GYGESIERMTVEEFELGKKWLSETFYLIRCEKDSLPNIKWVLDLAKSAVLRHGVRGLVID 578

Query: 878  PYNELDHQRPVSQTETEYVSQMLTKIKRFAQHHSCHVWFVAHPRQLHHWVGGPPNLYDIS 699
            PYNELDHQRP  QTETEYVSQMLT IKRFAQHHSCHVWFVAHPRQLH W GGPPN+YDIS
Sbjct: 579  PYNELDHQRPPGQTETEYVSQMLTMIKRFAQHHSCHVWFVAHPRQLHQWNGGPPNMYDIS 638

Query: 698  GSAHFINKCDNGIVIHRNRDPEVGPIDQVQVCVRKVRNKVIGTIGEAWLSYNRVTGEYMD 519
            GSAHFINKCDNGIVIHRNR+PE GP+DQVQVCVRKVRNKV+GTIG+A+LSY+R++G Y D
Sbjct: 639  GSAHFINKCDNGIVIHRNRNPEAGPVDQVQVCVRKVRNKVVGTIGDAFLSYDRISGVYTD 698

Query: 518  VD 513
            +D
Sbjct: 699  ID 700


>gb|KDP34842.1| hypothetical protein JCGZ_09130 [Jatropha curcas]
          Length = 670

 Score =  937 bits (2421), Expect = 0.0
 Identities = 455/673 (67%), Positives = 525/673 (78%), Gaps = 4/673 (0%)
 Frame = -2

Query: 2519 SSLFFHTLTPPKAAK---FYSQTYPFAAKKLVFSTILAKPTSPIFCRKSRLSYTPHAPIP 2349
            S  FF   T P  +    F S   P+   K +     +KP S I   K+   +T  A +P
Sbjct: 3    SKFFFKPATLPSLSPPPPFSSTRNPYHTFKRLLPVACSKPISKIPPYKAN-GFTSQATVP 61

Query: 2348 RPVSLENIEQDVVNSTXXXXXXXXXXXXXLNAESCMPGQHNHLLCPMCKGGDSMEMSLSL 2169
             PV  E  +   +N                N    +PGQHNHLLCP C GGDS E +L+L
Sbjct: 62   TPVYGEEEDLQTLNLKLLKGKLEELGIEMDNF---VPGQHNHLLCPRCYGGDSREKTLAL 118

Query: 2168 FVTREGDAAMWTCFRGKCGWKGSTRSFADGKSTYGNLSMISKVK-QPYREISEESLGLEP 1992
            F+  +G  A W CFRGKCGW G TR +A   S +  +S I + K +  REI+E+SL LEP
Sbjct: 119  FINPDGSGASWNCFRGKCGWNGGTRPYAIPGSNFTFVSPIQEKKVKKNREITEKSLELEP 178

Query: 1991 LCSELHKYFSERMISGETLRRNSVMQRRYGENQSVIAFTYWRDGVLVSCKYRDSTKNFWQ 1812
             C EL  YF+ER+I+ +TL+RN VMQR YG NQ  IAFTYWR+GVL SCKYRDSTK FWQ
Sbjct: 179  PCDELLCYFAERLITKKTLQRNRVMQRSYG-NQICIAFTYWRNGVLTSCKYRDSTKRFWQ 237

Query: 1811 ESNTEKIFYGLDDIKGASDIIIVEGEMDKLSMEEAGFKNCVSVPDGAPPKVSDKDLPAEE 1632
            E +TEKIFYGLDDIKGA +IIIVEGEMDKL+MEEAGF NCVSVPDGAPP +S KDLP ++
Sbjct: 238  EKDTEKIFYGLDDIKGADEIIIVEGEMDKLAMEEAGFLNCVSVPDGAPPSISSKDLPPKD 297

Query: 1631 KDMKYQYLWNCKEYLEKASRIILATDGDPPGQXXXXXXXXXXXXXRCWRVRWPKKNDVEH 1452
            KD KYQYLWNCKEYL++ASRIILATDGD PG+             RCWRV WP+KN  E+
Sbjct: 298  KDTKYQYLWNCKEYLKRASRIILATDGDQPGKALAEEIARRVGRERCWRVSWPRKNKDEY 357

Query: 1451 FKDANEVLMFLGPAVLREVIENAELYPIRGLFNFKDFFVDINAYYHQTIGYELGVSTGWR 1272
            FKDANEVLMFLGP  LR+VIENAELYPIRGLF+FKDFF +I+AYYH+T+GYE+G STGW+
Sbjct: 358  FKDANEVLMFLGPTALRDVIENAELYPIRGLFSFKDFFGEIDAYYHRTLGYEMGASTGWK 417

Query: 1271 ALDQLYNVVPGELTVVTGVPNSGKSEWIDALLCNLNQRVGWKFAFCSMENRVREHARKLL 1092
            AL+ LY VVPGELT+V+GVPNSGKSEWIDALLCNLN+  GWKFA CSMEN+VREHARKLL
Sbjct: 418  ALNGLYKVVPGELTIVSGVPNSGKSEWIDALLCNLNRSEGWKFALCSMENKVREHARKLL 477

Query: 1091 EKHVRKPFFDVRYGDSIERMGLEELEEGKVWLNDTFYLIRCENDCLPNINWVLDLARAAI 912
            EKH++KPFFD +YG + ERM +E+ EEGK WLNDTFYLIRCE+D LP+INWVLDLA+AA+
Sbjct: 478  EKHIKKPFFDAQYGGTAERMTVEDFEEGKQWLNDTFYLIRCEDDKLPSINWVLDLAKAAV 537

Query: 911  LRHGINGLVIDPYNELDHQRPVSQTETEYVSQMLTKIKRFAQHHSCHVWFVAHPRQLHHW 732
            LRHG++GLVIDPYNELDHQRP+S TETEYVSQMLT +KRFAQHHSCH+WFVAHPRQLHHW
Sbjct: 538  LRHGVHGLVIDPYNELDHQRPISMTETEYVSQMLTLVKRFAQHHSCHIWFVAHPRQLHHW 597

Query: 731  VGGPPNLYDISGSAHFINKCDNGIVIHRNRDPEVGPIDQVQVCVRKVRNKVIGTIGEAWL 552
            VG PPNLYDISGSAHFINKCDNGIVIHRNRDP  GP+DQVQVCVRKVRNKV+GTIGEA L
Sbjct: 598  VGAPPNLYDISGSAHFINKCDNGIVIHRNRDPHAGPLDQVQVCVRKVRNKVVGTIGEAVL 657

Query: 551  SYNRVTGEYMDVD 513
            SYNRVTGE+MD+D
Sbjct: 658  SYNRVTGEFMDID 670


>ref|XP_012444430.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            isoform X1 [Gossypium raimondii]
            gi|763789377|gb|KJB56373.1| hypothetical protein
            B456_009G117100 [Gossypium raimondii]
          Length = 704

 Score =  929 bits (2401), Expect = 0.0
 Identities = 450/688 (65%), Positives = 536/688 (77%), Gaps = 3/688 (0%)
 Frame = -2

Query: 2567 SNNFIMAGSKHLVFLKSSLFFHTLTPPKAAKFYSQTYPFAAKKLVFSTILAKPTSPIFCR 2388
            SN  I   SKH  FL S L   TL+P   +    +  P  + K +       P +  F  
Sbjct: 23   SNTTIFMTSKH--FLPSPLLPQTLSPKHFSTPSKRLLPSLSSKPI-------PNNHSFWL 73

Query: 2387 KSRLSYTPHAPI---PRPVSLENIEQDVVNSTXXXXXXXXXXXXXLNAESCMPGQHNHLL 2217
            ++   Y+  +P    P P   +++E    ++              ++    + G+ N L+
Sbjct: 74   RTNGFYSLPSPSDSSPSPAYSQDLEDQPSDTRSLQILNHKLKQLGIDITKSVAGRENRLM 133

Query: 2216 CPMCKGGDSMEMSLSLFVTREGDAAMWTCFRGKCGWKGSTRSFADGKSTYGNLSMISKVK 2037
            CP CKGG+S E+SLSLF++ +G +A W CFR KCGWKG T++ ADGK +  NL +++KVK
Sbjct: 134  CPSCKGGESGELSLSLFISLDGYSASWLCFRAKCGWKGYTKAAADGKPSIENLGLVNKVK 193

Query: 2036 QPYREISEESLGLEPLCSELHKYFSERMISGETLRRNSVMQRRYGENQSVIAFTYWRDGV 1857
               R+I+ ESL LEPLC++L  YF+ERMIS +TL+RN++MQ+R G+ +  IAFTYWR G 
Sbjct: 194  VK-RQITVESLELEPLCNQLTAYFAERMISSKTLKRNAIMQKRSGD-EIAIAFTYWRKGE 251

Query: 1856 LVSCKYRDSTKNFWQESNTEKIFYGLDDIKGASDIIIVEGEMDKLSMEEAGFKNCVSVPD 1677
            LV+CKYRD  K FWQE +TEKI YGLDDI  ASDIIIVEGEMDKL+MEEAGF+NCVSVPD
Sbjct: 252  LVNCKYRDIAKRFWQEKDTEKILYGLDDIADASDIIIVEGEMDKLAMEEAGFRNCVSVPD 311

Query: 1676 GAPPKVSDKDLPAEEKDMKYQYLWNCKEYLEKASRIILATDGDPPGQXXXXXXXXXXXXX 1497
            GAPP VS+K++PAEE+D KYQYLWNCKEY +KA+RIILATDGD PGQ             
Sbjct: 312  GAPPSVSEKEVPAEEQDTKYQYLWNCKEYFKKAARIILATDGDLPGQALAEELARRLGRE 371

Query: 1496 RCWRVRWPKKNDVEHFKDANEVLMFLGPAVLREVIENAELYPIRGLFNFKDFFVDINAYY 1317
            RCWRV+WPKKNDV HFKDANEVLM+LGP+VL+++I+NAELYPI GLFNF  FF +I+ YY
Sbjct: 372  RCWRVKWPKKNDVGHFKDANEVLMYLGPSVLKDIIDNAELYPISGLFNFSSFFDEIDQYY 431

Query: 1316 HQTIGYELGVSTGWRALDQLYNVVPGELTVVTGVPNSGKSEWIDALLCNLNQRVGWKFAF 1137
            H+T+GYE GVSTGWRALD LYNVVPGELT+VTGVPNSGKSEWIDALLCNLN+ VGWKFA 
Sbjct: 432  HRTLGYEFGVSTGWRALDNLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNEGVGWKFAL 491

Query: 1136 CSMENRVREHARKLLEKHVRKPFFDVRYGDSIERMGLEELEEGKVWLNDTFYLIRCENDC 957
            CSMEN+VR+HARKLLEK ++KPFF V YG ++ERM +EELE+GK WLNDTF LIRCEND 
Sbjct: 492  CSMENKVRDHARKLLEKSIKKPFFGVGYGSNVERMSVEELEKGKKWLNDTFQLIRCENDS 551

Query: 956  LPNINWVLDLARAAILRHGINGLVIDPYNELDHQRPVSQTETEYVSQMLTKIKRFAQHHS 777
            LP+I WVL+LARAA+LRHG+ GLVIDPYNELDHQRPVSQTETEYVSQMLTKIKRFAQHHS
Sbjct: 552  LPSIQWVLELARAAVLRHGVQGLVIDPYNELDHQRPVSQTETEYVSQMLTKIKRFAQHHS 611

Query: 776  CHVWFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDPEVGPIDQVQVCVR 597
            CHVWFVAHPRQLHHW+G PPNLYDISGSAHFINKCDNGIVIHRNRDPE GP+D VQVCVR
Sbjct: 612  CHVWFVAHPRQLHHWIGAPPNLYDISGSAHFINKCDNGIVIHRNRDPEAGPVDLVQVCVR 671

Query: 596  KVRNKVIGTIGEAWLSYNRVTGEYMDVD 513
            KVRNKV+G IG+A+LSY+RVTG Y D+D
Sbjct: 672  KVRNKVVGNIGDAFLSYDRVTGVYKDID 699


>ref|XP_009353864.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            isoform X2 [Pyrus x bretschneideri]
          Length = 698

 Score =  927 bits (2395), Expect = 0.0
 Identities = 461/702 (65%), Positives = 543/702 (77%), Gaps = 4/702 (0%)
 Frame = -2

Query: 2606 MHLVPRYRHLFNNSNNFIMAGSKHLVFLKSSLFFHTLTPPKAAKFYSQTYPFAAKKLVFS 2427
            +H   R     ++S + ++  SK L  L S+ F + LTP       +  +PF ++ LVFS
Sbjct: 5    LHRPFRKLSFLSSSTSGLLMASKQL--LNSAPFPNPLTPS------AHRHPFHSRSLVFS 56

Query: 2426 TILAKPT---SPIFCRKSRLSYTPHAPIPRPVSLENIEQDVVNSTXXXXXXXXXXXXXLN 2256
             I +KP     P+  R +  S    A +  PV +E  +++ ++S              ++
Sbjct: 57   PISSKPVLKIRPLCLRTNGYSSLSPAHVAEPVEVEAPKENGMSSMQMRILKEKLENLGID 116

Query: 2255 AESC-MPGQHNHLLCPMCKGGDSMEMSLSLFVTREGDAAMWTCFRGKCGWKGSTRSFADG 2079
             E+  +PGQ+NHL+CPMCKGGDS E SLS+ ++   D A+W CFRGKCGW GSTR+F   
Sbjct: 117  GETISVPGQYNHLICPMCKGGDSEEKSLSMDISENWDRAIWCCFRGKCGWTGSTRAFVGN 176

Query: 2078 KSTYGNLSMISKVKQPYREISEESLGLEPLCSELHKYFSERMISGETLRRNSVMQRRYGE 1899
            +         SK+K+  REI+EESLGLEPLC E+  YFSERMIS  TL RN+VMQ+  G+
Sbjct: 177  RLP----PETSKLKKK-REITEESLGLEPLCEEIVDYFSERMISRGTLMRNAVMQKSTGD 231

Query: 1898 NQSVIAFTYWRDGVLVSCKYRDSTKNFWQESNTEKIFYGLDDIKGASDIIIVEGEMDKLS 1719
             Q  IAF Y RDG LVSCKYRD  K FWQE +TEKIFYGLDDIKG +DIIIVEGE+DKLS
Sbjct: 232  -QIAIAFPYRRDGKLVSCKYRDIDKKFWQEKDTEKIFYGLDDIKGTNDIIIVEGEIDKLS 290

Query: 1718 MEEAGFKNCVSVPDGAPPKVSDKDLPAEEKDMKYQYLWNCKEYLEKASRIILATDGDPPG 1539
            MEEAGF NCVSVPDGAPPKVS K+LP EEKD KYQYLWNCKEYL+KASRI+LATDGD PG
Sbjct: 291  MEEAGFCNCVSVPDGAPPKVSSKELPPEEKDTKYQYLWNCKEYLKKASRIVLATDGDGPG 350

Query: 1538 QXXXXXXXXXXXXXRCWRVRWPKKNDVEHFKDANEVLMFLGPAVLREVIENAELYPIRGL 1359
            Q             RCWRV+WPKKND E+FKDANEVLM+LG  VL+ VIE+AEL+PIRGL
Sbjct: 351  QALAEELARRLGRERCWRVKWPKKNDKENFKDANEVLMYLGSDVLKGVIEDAELFPIRGL 410

Query: 1358 FNFKDFFVDINAYYHQTIGYELGVSTGWRALDQLYNVVPGELTVVTGVPNSGKSEWIDAL 1179
            FNF ++F +++AYYH+T+GYE GVSTGW+ L+ LYNVVPGELT+VTGVPNSGKSEWIDAL
Sbjct: 411  FNFANYFDELDAYYHRTLGYEYGVSTGWKNLNDLYNVVPGELTIVTGVPNSGKSEWIDAL 470

Query: 1178 LCNLNQRVGWKFAFCSMENRVREHARKLLEKHVRKPFFDVRYGDSIERMGLEELEEGKVW 999
            LCNL+  VGWKF  CSMEN+VREHARKLLEKH++KPFFD RYG S ERM +EE E+GK W
Sbjct: 471  LCNLSASVGWKFVLCSMENKVREHARKLLEKHIKKPFFDKRYGGSAERMSVEEFEQGKKW 530

Query: 998  LNDTFYLIRCENDCLPNINWVLDLARAAILRHGINGLVIDPYNELDHQRPVSQTETEYVS 819
            LNDTFYLIRCE+D LPNI+WVLDLA+AA+LRHG+ GLVIDPYNELDHQRP +QTETEYVS
Sbjct: 531  LNDTFYLIRCEDDSLPNISWVLDLAQAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVS 590

Query: 818  QMLTKIKRFAQHHSCHVWFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNRD 639
            QMLTKIKRFAQHH CHVWFVAHPRQLH W GGPPNLYDISGSAHFINKCDNGIVIHRNRD
Sbjct: 591  QMLTKIKRFAQHHCCHVWFVAHPRQLHQWTGGPPNLYDISGSAHFINKCDNGIVIHRNRD 650

Query: 638  PEVGPIDQVQVCVRKVRNKVIGTIGEAWLSYNRVTGEYMDVD 513
            PE G +DQVQVCVRKVRNKV GTIG+A+LSY+R TG++MDV+
Sbjct: 651  PEAGEMDQVQVCVRKVRNKVAGTIGDAFLSYDRATGQFMDVE 692


>ref|XP_008383370.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            [Malus domestica]
          Length = 698

 Score =  927 bits (2395), Expect = 0.0
 Identities = 460/702 (65%), Positives = 543/702 (77%), Gaps = 4/702 (0%)
 Frame = -2

Query: 2606 MHLVPRYRHLFNNSNNFIMAGSKHLVFLKSSLFFHTLTPPKAAKFYSQTYPFAAKKLVFS 2427
            +H   R     ++S + ++  SK L  LKS+ F + LTP       +  +PF ++ LVFS
Sbjct: 5    LHRPFRKLSFLSSSTSGLLMASKQL--LKSAPFPNPLTPS------AHRHPFHSRSLVFS 56

Query: 2426 TILAKPT---SPIFCRKSRLSYTPHAPIPRPVSLENIEQDVVNSTXXXXXXXXXXXXXLN 2256
             I +KP     P+  R +  S    A +  PV +E  +++ ++S              ++
Sbjct: 57   PISSKPVLKIRPLCLRTNGYSSLSPAHVAEPVEVETPKENGMSSMQMRILKEKLENLGID 116

Query: 2255 AESC-MPGQHNHLLCPMCKGGDSMEMSLSLFVTREGDAAMWTCFRGKCGWKGSTRSFADG 2079
             E+  +PGQ+NHL+CPMCKGGDS E SLS+ ++   D A+W CFRGKCGW GSTR+F   
Sbjct: 117  GETISVPGQYNHLICPMCKGGDSEEKSLSMDISENWDRAIWCCFRGKCGWTGSTRAFVGN 176

Query: 2078 KSTYGNLSMISKVKQPYREISEESLGLEPLCSELHKYFSERMISGETLRRNSVMQRRYGE 1899
            +         SK+K+    I+EESLGLEPLC E+  YFSERMIS  TL RN+VMQ+  G+
Sbjct: 177  RLP----PETSKLKKKXX-ITEESLGLEPLCEEIIDYFSERMISRGTLMRNAVMQKSTGD 231

Query: 1898 NQSVIAFTYWRDGVLVSCKYRDSTKNFWQESNTEKIFYGLDDIKGASDIIIVEGEMDKLS 1719
             Q  IAF Y RDG LVSCKYRD  K FWQE +TEKIFYGLDDIKG +DIIIVEGE+DKL+
Sbjct: 232  -QIAIAFPYRRDGKLVSCKYRDIDKKFWQEKDTEKIFYGLDDIKGTNDIIIVEGEIDKLA 290

Query: 1718 MEEAGFKNCVSVPDGAPPKVSDKDLPAEEKDMKYQYLWNCKEYLEKASRIILATDGDPPG 1539
            MEEAGF+NCVSVPDGAPPKVS K+LP EEKD KYQYLWNCKEYL+KASRI+LATDGD PG
Sbjct: 291  MEEAGFRNCVSVPDGAPPKVSSKELPPEEKDTKYQYLWNCKEYLKKASRIVLATDGDVPG 350

Query: 1538 QXXXXXXXXXXXXXRCWRVRWPKKNDVEHFKDANEVLMFLGPAVLREVIENAELYPIRGL 1359
            Q             RCWRV+WPKKND E+FKDANEVLM+LG  VL+ VIE+AEL+PIRGL
Sbjct: 351  QALAEELARRLGRERCWRVKWPKKNDKENFKDANEVLMYLGSDVLKGVIEDAELFPIRGL 410

Query: 1358 FNFKDFFVDINAYYHQTIGYELGVSTGWRALDQLYNVVPGELTVVTGVPNSGKSEWIDAL 1179
            FNF ++F +++AYYH+T+GYE GVSTGW+ L+ LYNVVPGELT+VTGVPNSGKSEWIDAL
Sbjct: 411  FNFANYFDELDAYYHRTLGYEYGVSTGWKNLNDLYNVVPGELTIVTGVPNSGKSEWIDAL 470

Query: 1178 LCNLNQRVGWKFAFCSMENRVREHARKLLEKHVRKPFFDVRYGDSIERMGLEELEEGKVW 999
            LCNL+  VGWKF  CSMEN+VREHARKLLEKH++KPFFD RYG S ERM +EE E+GK W
Sbjct: 471  LCNLSASVGWKFVLCSMENKVREHARKLLEKHIKKPFFDKRYGGSAERMSVEEFEQGKKW 530

Query: 998  LNDTFYLIRCENDCLPNINWVLDLARAAILRHGINGLVIDPYNELDHQRPVSQTETEYVS 819
            LNDTFYLIRCE+D LPNI+WVLDLA+AA+LRHG+ GLVIDPYNELDHQRP +QTETEYVS
Sbjct: 531  LNDTFYLIRCEDDSLPNISWVLDLAQAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVS 590

Query: 818  QMLTKIKRFAQHHSCHVWFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNRD 639
            QMLTKIKRFAQHH CHVWFVAHPRQLH W GGPPNLYDISGSAHFINKCDNGIVIHRNRD
Sbjct: 591  QMLTKIKRFAQHHCCHVWFVAHPRQLHQWTGGPPNLYDISGSAHFINKCDNGIVIHRNRD 650

Query: 638  PEVGPIDQVQVCVRKVRNKVIGTIGEAWLSYNRVTGEYMDVD 513
            PE G IDQVQVCVRKVRNKV GTIG+A+LSY+R TG++MDV+
Sbjct: 651  PEAGEIDQVQVCVRKVRNKVAGTIGDAFLSYDRATGQFMDVE 692