BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00006053
         (2461 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP07172.1| unnamed protein product [Coffea canephora]           1359   0.0  
emb|CDP09677.1| unnamed protein product [Coffea canephora]           1275   0.0  
ref|XP_011082677.1| PREDICTED: DNA-directed RNA polymerases IV a...  1203   0.0  
ref|XP_009605686.1| PREDICTED: DNA-directed RNA polymerases IV a...  1202   0.0  
ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerases IV a...  1194   0.0  
ref|XP_009787512.1| PREDICTED: DNA-directed RNA polymerases IV a...  1193   0.0  
ref|XP_009787511.1| PREDICTED: DNA-directed RNA polymerases IV a...  1193   0.0  
ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV a...  1192   0.0  
gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhodode...  1192   0.0  
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerases IV a...  1186   0.0  
ref|XP_010325603.1| PREDICTED: DNA-directed RNA polymerases IV a...  1181   0.0  
ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerases IV a...  1181   0.0  
gb|AAY68200.1| RNA polymerase IV second largest subunit [Antirrh...  1177   0.0  
ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV a...  1173   0.0  
emb|CBI21137.3| unnamed protein product [Vitis vinifera]             1165   0.0  
ref|XP_012076429.1| PREDICTED: DNA-directed RNA polymerases IV a...  1156   0.0  
ref|XP_011036682.1| PREDICTED: DNA-directed RNA polymerases IV a...  1150   0.0  
ref|XP_012847152.1| PREDICTED: DNA-directed RNA polymerases IV a...  1150   0.0  
ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ...  1142   0.0  
ref|XP_010275247.1| PREDICTED: DNA-directed RNA polymerases IV a...  1139   0.0  

>emb|CDP07172.1| unnamed protein product [Coffea canephora]
          Length = 1230

 Score = 1359 bits (3517), Expect = 0.0
 Identities = 676/785 (86%), Positives = 704/785 (89%)
 Frame = -2

Query: 2460 DDFRNKXXXXXXXXXXXXLKVHLKHAERRMVKAIQRDLYGDHDLRGIETYVDASIISNGL 2281
            DDFRNK            LKVHLKHAERRMVKAIQ+D+YGDH+LRGIETYVDASIISNGL
Sbjct: 444  DDFRNKRLELASELLERELKVHLKHAERRMVKAIQKDIYGDHELRGIETYVDASIISNGL 503

Query: 2280 SRAFSTGAWSHPYKKMERVSGVVATLRRTNPLQMTADMRKTRQQVSYTGRVSDARYPHPS 2101
            SRAFSTGAWSHPYKKMERVSGVVATLRRTNPLQMTADMRKTRQQVSYTGRV DARYPHPS
Sbjct: 504  SRAFSTGAWSHPYKKMERVSGVVATLRRTNPLQMTADMRKTRQQVSYTGRVGDARYPHPS 563

Query: 2100 HWGKICFLSTPDGENCGLVKNLASLGLVSTTXXXXXXXXXXXXXXXXXXXDTSSLMYEEH 1921
            HWGKICFLSTPDGENCGLVKNLASLGLVSTT                   DTSS  +EEH
Sbjct: 564  HWGKICFLSTPDGENCGLVKNLASLGLVSTTVLESLLDKLLDCGLKLLLDDTSSSTHEEH 623

Query: 1920 KIFLDGEWIGTCKDSALFVAEVKSKRWNKEIPQQVEIKRDEKHREIRVFSDAGRVLRPLL 1741
            KIFLDG+WIGTCKDSALFVAE+K+KR +KEIPQQVEIKRDEKHREIRVFSDAGRVLRPLL
Sbjct: 624  KIFLDGDWIGTCKDSALFVAELKNKRRSKEIPQQVEIKRDEKHREIRVFSDAGRVLRPLL 683

Query: 1740 VVGNLKRIKDLKGEVYSFQSLLDKXXXXXXXXXXXEDCVIAWEISFLYTGSKEKPPLKYT 1561
            VV NLKRIKDLKGE  SFQSLLD+           EDCV AWEI  LYTGSKEKPP+KYT
Sbjct: 684  VVENLKRIKDLKGEDCSFQSLLDRGIIELIGPEEEEDCVTAWEIGLLYTGSKEKPPMKYT 743

Query: 1560 HCELDQSFLLALSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPRIRVDTNIHQLYY 1381
            HCELDQSFLL LSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNP IRVDTNIHQLYY
Sbjct: 744  HCELDQSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPSIRVDTNIHQLYY 803

Query: 1380 PQRPLFRTMLSDSLGKPSYPRHRGMLPRPEYFNGQCAMVAVNVHLGYNQEDSLVMNRASL 1201
            PQ+PLFRTMLSDSLGKPSYPRHRGMLPRPEYFNGQCA+VAVNVHLGYNQEDSLVMNRASL
Sbjct: 804  PQKPLFRTMLSDSLGKPSYPRHRGMLPRPEYFNGQCAIVAVNVHLGYNQEDSLVMNRASL 863

Query: 1200 ERGMFRSEHIRSYKSDVDEMENVGKRHRTEDFVKFGKMSSNIGRVDSLDDDGFPFVGARL 1021
            ERGMFRSEHIRSYKSDVDE EN+GKRH+ EDFVKFGKM S IGRVDSLDDDGFPF+GA L
Sbjct: 864  ERGMFRSEHIRSYKSDVDETENLGKRHKPEDFVKFGKMPSKIGRVDSLDDDGFPFIGASL 923

Query: 1020 QTGDVVIGKFSESGADHSVKLKHTEKGVVQKVVLSSNDEGKNFAVVSLRQVRSPGLGDKF 841
            QTGD+VIGK+SESG DHSVKLKHTEKG+VQKVVLS+NDEGKNFAVVSLRQVRSPGLGDKF
Sbjct: 924  QTGDIVIGKYSESGTDHSVKLKHTEKGMVQKVVLSANDEGKNFAVVSLRQVRSPGLGDKF 983

Query: 840  SSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXXA 661
            SSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQ              A
Sbjct: 984  SSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQLLEAALAKGIALGGA 1043

Query: 660  QKYATPFSTLSIDAIADQLQRLGFSRWGNERMYNGRTGEMIQTTVFMGPTFYQRLAHMAE 481
            QKYATPFSTLS+DAI DQLQRLGFSRWGNERMYNGRTGEMI T VFMGPTFYQRL HMAE
Sbjct: 1044 QKYATPFSTLSVDAIGDQLQRLGFSRWGNERMYNGRTGEMIHTMVFMGPTFYQRLTHMAE 1103

Query: 480  DKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANVHERLFTLSDSSEM 301
            DKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAA+N+HERLFTLSDSSEM
Sbjct: 1104 DKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAASNLHERLFTLSDSSEM 1163

Query: 300  YICCKCRNVANVIQRPVLGGRKIRGPFCRFCESAEDIVKVNVPHGAKLLCQELFSMGISL 121
            +IC KCR++ANVIQRPV GGRKIRGPFCR CESAEDIV+VNVP+GAKLLCQELFSMGISL
Sbjct: 1164 HICRKCRSMANVIQRPVFGGRKIRGPFCRLCESAEDIVRVNVPYGAKLLCQELFSMGISL 1223

Query: 120  KFDTD 106
            KFDT+
Sbjct: 1224 KFDTE 1228


>emb|CDP09677.1| unnamed protein product [Coffea canephora]
          Length = 1213

 Score = 1275 bits (3299), Expect = 0.0
 Identities = 628/785 (80%), Positives = 679/785 (86%)
 Frame = -2

Query: 2460 DDFRNKXXXXXXXXXXXXLKVHLKHAERRMVKAIQRDLYGDHDLRGIETYVDASIISNGL 2281
            DDFRNK            LKVHLKH ERRMVKA+QRDLYGD  L+ IE Y+DASIISNGL
Sbjct: 427  DDFRNKRLELASELLERELKVHLKHVERRMVKAMQRDLYGDRSLQSIEHYLDASIISNGL 486

Query: 2280 SRAFSTGAWSHPYKKMERVSGVVATLRRTNPLQMTADMRKTRQQVSYTGRVSDARYPHPS 2101
            SRAFSTG WSHPYKK ERVSGVVA+LRRTNPLQMTADMRKTRQQVSY G+V DARYPH S
Sbjct: 487  SRAFSTGGWSHPYKKTERVSGVVASLRRTNPLQMTADMRKTRQQVSYIGKVGDARYPHCS 546

Query: 2100 HWGKICFLSTPDGENCGLVKNLASLGLVSTTXXXXXXXXXXXXXXXXXXXDTSSLMYEEH 1921
            HWGKICFLSTPDGENCGLVKNLASLGLVST                     TSSL++ EH
Sbjct: 547  HWGKICFLSTPDGENCGLVKNLASLGLVSTKVLEPLIERLLDCGLKQLVDHTSSLVHGEH 606

Query: 1920 KIFLDGEWIGTCKDSALFVAEVKSKRWNKEIPQQVEIKRDEKHREIRVFSDAGRVLRPLL 1741
            KIFLDG+WIGTCKDSA FVAE++SKR NKEIP QVEIKRDE H EIR+FSDAGRVLRPLL
Sbjct: 607  KIFLDGDWIGTCKDSAFFVAELRSKRRNKEIPPQVEIKRDEHHGEIRIFSDAGRVLRPLL 666

Query: 1740 VVGNLKRIKDLKGEVYSFQSLLDKXXXXXXXXXXXEDCVIAWEISFLYTGSKEKPPLKYT 1561
            VV NLK+IKDLKGE YSFQSLLDK           EDC  AW I +LYTG++E P +KYT
Sbjct: 667  VVENLKKIKDLKGENYSFQSLLDKGIIELIGPEEEEDCPTAWAIDYLYTGNRENPSMKYT 726

Query: 1560 HCELDQSFLLALSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPRIRVDTNIHQLYY 1381
            HCELD SFLL LSCGIIP+ANHDHARRVLYQSEKHSQQAIGFSTTNP IRVDTNIHQLYY
Sbjct: 727  HCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPSIRVDTNIHQLYY 786

Query: 1380 PQRPLFRTMLSDSLGKPSYPRHRGMLPRPEYFNGQCAMVAVNVHLGYNQEDSLVMNRASL 1201
            PQRPLF TMLSD L KP+YPRHRGMLPRPEY+NGQCA+VAVNVHLGYNQEDSLVMNRASL
Sbjct: 787  PQRPLFCTMLSDCLWKPAYPRHRGMLPRPEYYNGQCAIVAVNVHLGYNQEDSLVMNRASL 846

Query: 1200 ERGMFRSEHIRSYKSDVDEMENVGKRHRTEDFVKFGKMSSNIGRVDSLDDDGFPFVGARL 1021
            ERGMFRSEHIRSYKSD+DE  N+GK+H++ED VKFGKM S IGRVDSLDDDGFPF+GA L
Sbjct: 847  ERGMFRSEHIRSYKSDIDEKHNLGKKHKSEDEVKFGKMPSKIGRVDSLDDDGFPFIGASL 906

Query: 1020 QTGDVVIGKFSESGADHSVKLKHTEKGVVQKVVLSSNDEGKNFAVVSLRQVRSPGLGDKF 841
            QTGD+VIGK+SESGADHSVKLKHTE+G+VQKVVLS++D+GKNFAVVSLRQVRSP LGDKF
Sbjct: 907  QTGDIVIGKYSESGADHSVKLKHTERGMVQKVVLSADDDGKNFAVVSLRQVRSPSLGDKF 966

Query: 840  SSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXXA 661
            SSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQ               
Sbjct: 967  SSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQLLEAALAKGIALGGV 1026

Query: 660  QKYATPFSTLSIDAIADQLQRLGFSRWGNERMYNGRTGEMIQTTVFMGPTFYQRLAHMAE 481
            QKYATPFS LS+DA+ DQL RLGFSRWGNER+Y+GRTGEMI + +FMGPTFYQRL HMAE
Sbjct: 1027 QKYATPFSALSVDAVTDQLHRLGFSRWGNERVYSGRTGEMIHSMIFMGPTFYQRLIHMAE 1086

Query: 480  DKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANVHERLFTLSDSSEM 301
            DKVKFRNTGPVHPLTRQPVADRKRFGGI+FGEMERDCLIAHGAA+N+HERLFTLSDSSEM
Sbjct: 1087 DKVKFRNTGPVHPLTRQPVADRKRFGGIRFGEMERDCLIAHGAASNLHERLFTLSDSSEM 1146

Query: 300  YICCKCRNVANVIQRPVLGGRKIRGPFCRFCESAEDIVKVNVPHGAKLLCQELFSMGISL 121
            ++C KC+++AN+IQR VLGGRKIRGPFCRFCESAEDIVKVNVP+GAKLL QELFS+GISL
Sbjct: 1147 HVCRKCKSMANLIQRSVLGGRKIRGPFCRFCESAEDIVKVNVPYGAKLLSQELFSLGISL 1206

Query: 120  KFDTD 106
            KFD +
Sbjct: 1207 KFDAE 1211


>ref|XP_011082677.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Sesamum indicum]
          Length = 1207

 Score = 1203 bits (3112), Expect = 0.0
 Identities = 585/787 (74%), Positives = 658/787 (83%), Gaps = 2/787 (0%)
 Frame = -2

Query: 2460 DDFRNKXXXXXXXXXXXXLKVHLKHAERRMVKAIQRDLYGDHDLRGIETYVDASIISNGL 2281
            DD RNK            LKVH+KHAERRMVKAIQRDLY D +++ I+ Y+DASII+NGL
Sbjct: 420  DDLRNKRLELAGELLERELKVHIKHAERRMVKAIQRDLYNDREVQSIDHYLDASIITNGL 479

Query: 2280 SRAFSTGAWSHPYKKMERVSGVVATLRRTNPLQMTADMRKTRQQVSYTGRVSDARYPHPS 2101
            SRAFSTGAWSHPYK+MER+SG+VAT+RRTNPLQ TADMRKTRQQVSYTGRV DARYPHPS
Sbjct: 480  SRAFSTGAWSHPYKRMERISGIVATIRRTNPLQATADMRKTRQQVSYTGRVGDARYPHPS 539

Query: 2100 HWGKICFLSTPDGENCGLVKNLASLGLVSTTXXXXXXXXXXXXXXXXXXXD--TSSLMYE 1927
            HWGKICFLSTPDGENCGLVKNLAS+GLVST                        S+L+  
Sbjct: 540  HWGKICFLSTPDGENCGLVKNLASMGLVSTDILNRESLLQKFYECGMEMLVDDASALLNG 599

Query: 1926 EHKIFLDGEWIGTCKDSALFVAEVKSKRWNKEIPQQVEIKRDEKHREIRVFSDAGRVLRP 1747
            +HKIFLDG+W+G CKDS+ FVA V+ KR   E+P Q+EIKRD+ H E+R+F+DAGR+LRP
Sbjct: 600  KHKIFLDGDWVGICKDSSSFVARVRRKRRKTEVPHQIEIKRDKHHGEVRIFADAGRILRP 659

Query: 1746 LLVVGNLKRIKDLKGEVYSFQSLLDKXXXXXXXXXXXEDCVIAWEISFLYTGSKEKPPLK 1567
            LL+V NL++IKDLKG+ +SFQSLLD            EDC  AW + +L+T   E PP+K
Sbjct: 660  LLIVQNLRKIKDLKGD-FSFQSLLDSSIIELIGPEEEEDCQTAWGVRYLFTAELENPPIK 718

Query: 1566 YTHCELDQSFLLALSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPRIRVDTNIHQL 1387
            YTHCELD SFLL LSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTN  IRVDTN HQL
Sbjct: 719  YTHCELDSSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNSSIRVDTNSHQL 778

Query: 1386 YYPQRPLFRTMLSDSLGKPSYPRHRGMLPRPEYFNGQCAMVAVNVHLGYNQEDSLVMNRA 1207
            YYPQRPLFRTMLSD LG+  Y  H+GMLPRPE+FNGQCA+VAVNVHLGYNQEDSLVMNRA
Sbjct: 779  YYPQRPLFRTMLSDCLGRSKYDHHKGMLPRPEFFNGQCAIVAVNVHLGYNQEDSLVMNRA 838

Query: 1206 SLERGMFRSEHIRSYKSDVDEMENVGKRHRTEDFVKFGKMSSNIGRVDSLDDDGFPFVGA 1027
            SLERGMFRSEH+RSYK++V+  E  GK+ +T+D V FGKM S IGRVDSLDDDGFP++GA
Sbjct: 839  SLERGMFRSEHVRSYKAEVENSEAAGKKAKTDDLVSFGKMQSKIGRVDSLDDDGFPYIGA 898

Query: 1026 RLQTGDVVIGKFSESGADHSVKLKHTEKGVVQKVVLSSNDEGKNFAVVSLRQVRSPGLGD 847
             LQTGD+VIGK + SG DHS+KLKHTEKG+VQKVVLS+NDEGKNFAVVSLRQVRSP LGD
Sbjct: 899  NLQTGDIVIGKHAASGVDHSIKLKHTEKGMVQKVVLSANDEGKNFAVVSLRQVRSPCLGD 958

Query: 846  KFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXX 667
            KFSSMHGQKGVLGFLESQENFPFT QGIVPDIVINPHAFPSRQTPGQ             
Sbjct: 959  KFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALAKGIALG 1018

Query: 666  XAQKYATPFSTLSIDAIADQLQRLGFSRWGNERMYNGRTGEMIQTTVFMGPTFYQRLAHM 487
               KYATPF++ S++ I  QL RLGFSRWG+ER+Y+GRTGE +Q+ +FMGPTFYQRL HM
Sbjct: 1019 GGLKYATPFTSPSVEDITAQLHRLGFSRWGDERVYDGRTGEKVQSLIFMGPTFYQRLTHM 1078

Query: 486  AEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANVHERLFTLSDSS 307
            AEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAAN+HERLFTLSDSS
Sbjct: 1079 AEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSS 1138

Query: 306  EMYICCKCRNVANVIQRPVLGGRKIRGPFCRFCESAEDIVKVNVPHGAKLLCQELFSMGI 127
            +M+IC KC+N+ANVIQRPV GGRKIRGP+CRFCES ED+V+VNVP+GAKLLCQELFSMGI
Sbjct: 1139 QMHICRKCKNMANVIQRPVFGGRKIRGPYCRFCESVEDVVRVNVPYGAKLLCQELFSMGI 1198

Query: 126  SLKFDTD 106
            SLKFDT+
Sbjct: 1199 SLKFDTE 1205


>ref|XP_009605686.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Nicotiana tomentosiformis]
          Length = 1220

 Score = 1202 bits (3110), Expect = 0.0
 Identities = 588/786 (74%), Positives = 658/786 (83%), Gaps = 1/786 (0%)
 Frame = -2

Query: 2460 DDFRNKXXXXXXXXXXXXLKVHLKHAERRMVKAIQRDLYGDHDLRGIETYVDASIISNGL 2281
            DDFRNK            L+ H+KHAERRM+KA+QRDLYGD  ++ IE Y+DASII+NGL
Sbjct: 434  DDFRNKRLELAGELLERELRAHIKHAERRMLKAMQRDLYGDRQVQPIEHYLDASIITNGL 493

Query: 2280 SRAFSTGAWSHPYKKMERVSGVVATLRRTNPLQMTADMRKTRQQVSYTGRVSDARYPHPS 2101
            SRAFSTG W HPYK+MERVSGVVAT+RRTNPLQMTADMRKTRQQV+YTG+V DARYPHPS
Sbjct: 494  SRAFSTGHWCHPYKRMERVSGVVATIRRTNPLQMTADMRKTRQQVTYTGKVGDARYPHPS 553

Query: 2100 HWGKICFLSTPDGENCGLVKNLASLGLVSTTXXXXXXXXXXXXXXXXXXXDTSSLMYEEH 1921
            HWGK+CFLSTPDGENCGLVKNLAS+GLVSTT                   D++  ++ + 
Sbjct: 554  HWGKVCFLSTPDGENCGLVKNLASMGLVSTTILKPLLETLYRCGMQKLVDDSAISLHGKQ 613

Query: 1920 KIFLDGEWIGTCKDSALFVAEVKSKRWNKEIPQQVEIKRDEKHREIRVFSDAGRVLRPLL 1741
            K+ L+G+W+G C+DSALFV++++ KR   E+P QVE+KRDE+  E+R+FSDAGR+LRPLL
Sbjct: 614  KVLLNGDWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDEQQGEVRIFSDAGRILRPLL 673

Query: 1740 VVGNLKRIKDLKGEVYSFQSLLDKXXXXXXXXXXXEDCVIAWEISFLYTGSKEKPPLKYT 1561
            VV NLK+IK LKG  Y FQSLLD            EDC  AW + +L    KE PP KYT
Sbjct: 674  VVSNLKKIKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGVEYLLKADKENPPAKYT 733

Query: 1560 HCELDQSFLLALSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPRIRVDTNIHQLYY 1381
            HCELD SFLL LSCGIIPFANHDHARRVLYQSEKHSQQAIGFST NP IRVDTN HQLYY
Sbjct: 734  HCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNIRVDTNTHQLYY 793

Query: 1380 PQRPLFRTMLSDSLGKPSYPR-HRGMLPRPEYFNGQCAMVAVNVHLGYNQEDSLVMNRAS 1204
            PQRPLFRTMLSDSLGKP Y R  +GMLPRPEY+NGQCA+VAVNVHLGYNQEDSLVMNRAS
Sbjct: 794  PQRPLFRTMLSDSLGKPKYARCQKGMLPRPEYYNGQCAIVAVNVHLGYNQEDSLVMNRAS 853

Query: 1203 LERGMFRSEHIRSYKSDVDEMENVGKRHRTEDFVKFGKMSSNIGRVDSLDDDGFPFVGAR 1024
            LERGMFRSEH+RSYK++VD  E +GK+ + ED V FGK  S IGRVDSLDDDGFPF+GA 
Sbjct: 854  LERGMFRSEHVRSYKAEVDNKEAIGKKLKIEDSVNFGKTQSKIGRVDSLDDDGFPFIGAN 913

Query: 1023 LQTGDVVIGKFSESGADHSVKLKHTEKGVVQKVVLSSNDEGKNFAVVSLRQVRSPGLGDK 844
            LQ+GD++IGK +ESGADHSVKLKHTE+G+VQKV+LS+NDEGKNFAVVSLRQVRSP LGDK
Sbjct: 914  LQSGDIIIGKHAESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVSLRQVRSPCLGDK 973

Query: 843  FSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXX 664
            FSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQ              
Sbjct: 974  FSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGG 1033

Query: 663  AQKYATPFSTLSIDAIADQLQRLGFSRWGNERMYNGRTGEMIQTTVFMGPTFYQRLAHMA 484
             QKYATPFSTLS+DAI +QL   GFS+WGNER+YNGRTGEM+Q  +FMGPTFYQRL HMA
Sbjct: 1034 GQKYATPFSTLSVDAIIEQLHGRGFSKWGNERVYNGRTGEMVQNLIFMGPTFYQRLIHMA 1093

Query: 483  EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANVHERLFTLSDSSE 304
            EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAAN+HERLFTLSDSS+
Sbjct: 1094 EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQ 1153

Query: 303  MYICCKCRNVANVIQRPVLGGRKIRGPFCRFCESAEDIVKVNVPHGAKLLCQELFSMGIS 124
            M+IC KC+N+ANVIQR V GG K+RGP+CRFCES EDIVKVNVP+GAKLLCQELFSMGIS
Sbjct: 1154 MHICGKCKNMANVIQRSVQGG-KVRGPYCRFCESVEDIVKVNVPYGAKLLCQELFSMGIS 1212

Query: 123  LKFDTD 106
            LKFDT+
Sbjct: 1213 LKFDTE 1218


>ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Solanum
            lycopersicum]
          Length = 1217

 Score = 1194 bits (3089), Expect = 0.0
 Identities = 587/786 (74%), Positives = 654/786 (83%), Gaps = 1/786 (0%)
 Frame = -2

Query: 2460 DDFRNKXXXXXXXXXXXXLKVHLKHAERRMVKAIQRDLYGDHDLRGIETYVDASIISNGL 2281
            DDFRNK            L+ H+KHAERRMVKA+QRDLYGD  ++ IE Y+DASII+NGL
Sbjct: 431  DDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIEHYLDASIITNGL 490

Query: 2280 SRAFSTGAWSHPYKKMERVSGVVATLRRTNPLQMTADMRKTRQQVSYTGRVSDARYPHPS 2101
            SRAFSTG W HPYK+MERVSGVVATLRRTNPLQMTADMRK+RQQV+YTG+V DARYPHPS
Sbjct: 491  SRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQVTYTGKVGDARYPHPS 550

Query: 2100 HWGKICFLSTPDGENCGLVKNLASLGLVSTTXXXXXXXXXXXXXXXXXXXDTSSLMYEEH 1921
            HWGK+CFLSTPDGENCGLVKNLAS+GLVST                    D S+ ++ + 
Sbjct: 551  HWGKLCFLSTPDGENCGLVKNLASMGLVSTIILKPFLETLFRCGMQKLVDDCSTSLHGKQ 610

Query: 1920 KIFLDGEWIGTCKDSALFVAEVKSKRWNKEIPQQVEIKRDEKHREIRVFSDAGRVLRPLL 1741
            K+ LDGEW+G C+DSALFV++++ KR   E+P QVE+KRDE   E+R+FSD GR+LRPLL
Sbjct: 611  KVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDELQGEVRIFSDPGRILRPLL 670

Query: 1740 VVGNLKRIKDLKGEVYSFQSLLDKXXXXXXXXXXXEDCVIAWEISFLYTGSKEKPPLKYT 1561
            VV NLK+IK LKG  Y FQSLLD            EDC  AW + ++    KE PP KYT
Sbjct: 671  VVSNLKKIKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGVEYILKADKENPPAKYT 730

Query: 1560 HCELDQSFLLALSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPRIRVDTNIHQLYY 1381
            HCELD SFLL LSCGIIPFANHDHARRVLYQSEKHSQQAIGFST NP  RVDTN HQLYY
Sbjct: 731  HCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNNRVDTNTHQLYY 790

Query: 1380 PQRPLFRTMLSDSLGKPSYPRH-RGMLPRPEYFNGQCAMVAVNVHLGYNQEDSLVMNRAS 1204
            PQRPLFRTML+DSLGKP   ++ +GMLPRPEYFNGQCA+VAVNVHLGYNQEDSLVMNRAS
Sbjct: 791  PQRPLFRTMLADSLGKPKCAQYQKGMLPRPEYFNGQCAIVAVNVHLGYNQEDSLVMNRAS 850

Query: 1203 LERGMFRSEHIRSYKSDVDEMENVGKRHRTEDFVKFGKMSSNIGRVDSLDDDGFPFVGAR 1024
            LERGMFRSEH+RSYK++VD  E + K+ + ED V FGK  S IGRVDSLDDDGFPF+GA 
Sbjct: 851  LERGMFRSEHVRSYKAEVDNKEAMAKKLKIEDSVNFGKTQSKIGRVDSLDDDGFPFIGAN 910

Query: 1023 LQTGDVVIGKFSESGADHSVKLKHTEKGVVQKVVLSSNDEGKNFAVVSLRQVRSPGLGDK 844
            LQ+GD++IGKFSESGADHSVKLKHTE+G+VQKV+LS+NDEGKNFAVVSLRQVRSP LGDK
Sbjct: 911  LQSGDIIIGKFSESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVSLRQVRSPCLGDK 970

Query: 843  FSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXX 664
            FSSMHGQKGVLGFLESQENFPFT QGIVPDIVINPHAFPSRQTPGQ              
Sbjct: 971  FSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGG 1030

Query: 663  AQKYATPFSTLSIDAIADQLQRLGFSRWGNERMYNGRTGEMIQTTVFMGPTFYQRLAHMA 484
             QKYATPFSTLS+DAI +QLQ  GF+RWGNER+YNGRTGEM+ + +FMGPTFYQRL HMA
Sbjct: 1031 GQKYATPFSTLSVDAIMEQLQGRGFTRWGNERVYNGRTGEMVHSLIFMGPTFYQRLIHMA 1090

Query: 483  EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANVHERLFTLSDSSE 304
            EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAAN+HERLFTLSDSS+
Sbjct: 1091 EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQ 1150

Query: 303  MYICCKCRNVANVIQRPVLGGRKIRGPFCRFCESAEDIVKVNVPHGAKLLCQELFSMGIS 124
            M+IC KC+N+ANVIQR V GG K+RGPFCRFCES EDIVKVNVP+GAKLLCQELFSMGIS
Sbjct: 1151 MHICGKCKNMANVIQRTVQGG-KVRGPFCRFCESVEDIVKVNVPYGAKLLCQELFSMGIS 1209

Query: 123  LKFDTD 106
            LKFDT+
Sbjct: 1210 LKFDTE 1215


>ref|XP_009787512.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 isoform X2
            [Nicotiana sylvestris]
          Length = 1216

 Score = 1193 bits (3086), Expect = 0.0
 Identities = 584/786 (74%), Positives = 656/786 (83%), Gaps = 1/786 (0%)
 Frame = -2

Query: 2460 DDFRNKXXXXXXXXXXXXLKVHLKHAERRMVKAIQRDLYGDHDLRGIETYVDASIISNGL 2281
            DDFRNK            L+ H+KHAERRM+KA+QRDLYGD  ++ IE Y+DASII+NGL
Sbjct: 430  DDFRNKRLELAGELLERELRAHIKHAERRMLKAMQRDLYGDRQVQPIEHYLDASIITNGL 489

Query: 2280 SRAFSTGAWSHPYKKMERVSGVVATLRRTNPLQMTADMRKTRQQVSYTGRVSDARYPHPS 2101
            SRAFSTG W HPYK+MERVSGVVAT+RRTNPLQMTADMRKTRQQV+YTG+V DARYPHPS
Sbjct: 490  SRAFSTGHWCHPYKRMERVSGVVATIRRTNPLQMTADMRKTRQQVTYTGKVGDARYPHPS 549

Query: 2100 HWGKICFLSTPDGENCGLVKNLASLGLVSTTXXXXXXXXXXXXXXXXXXXDTSSLMYEEH 1921
            HWGK+CFLSTPDGENCGLVKNLAS+GLVSTT                   D+++ ++ + 
Sbjct: 550  HWGKVCFLSTPDGENCGLVKNLASMGLVSTTILKPLLETLYRCGMQKLVDDSATSLHGKQ 609

Query: 1920 KIFLDGEWIGTCKDSALFVAEVKSKRWNKEIPQQVEIKRDEKHREIRVFSDAGRVLRPLL 1741
            K+ L+G+W+G C+DSA FV++++ KR   E+P QVE+KRDE+  E+R+FSDAGR+LRPLL
Sbjct: 610  KVLLNGDWVGICEDSAFFVSKLRRKRRRNEVPHQVEVKRDEQQGEVRMFSDAGRILRPLL 669

Query: 1740 VVGNLKRIKDLKGEVYSFQSLLDKXXXXXXXXXXXEDCVIAWEISFLYTGSKEKPPLKYT 1561
            VV NLK+IK LKG    FQSLLD            EDC  AW + +L T  KE PP KYT
Sbjct: 670  VVSNLKKIKALKGGDCGFQSLLDNGIIELIGPEEEEDCRTAWGVEYLLTADKENPPAKYT 729

Query: 1560 HCELDQSFLLALSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPRIRVDTNIHQLYY 1381
            HCELD SFLL LSCGIIPFANHDHARRVLYQSEKHSQQAIGFST NP IRVDTN HQLYY
Sbjct: 730  HCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNIRVDTNTHQLYY 789

Query: 1380 PQRPLFRTMLSDSLGKPSYPR-HRGMLPRPEYFNGQCAMVAVNVHLGYNQEDSLVMNRAS 1204
            PQRPLFRTMLSDSLGKP Y    +GMLPRPEY+NGQCA+VAVNVHLGYNQEDSLVMN AS
Sbjct: 790  PQRPLFRTMLSDSLGKPKYTHSQKGMLPRPEYYNGQCAIVAVNVHLGYNQEDSLVMNCAS 849

Query: 1203 LERGMFRSEHIRSYKSDVDEMENVGKRHRTEDFVKFGKMSSNIGRVDSLDDDGFPFVGAR 1024
            LERGMFRSEH+RSYK++VD  E +GK+ + ED V FGK  S IGRVDSLDDDGFPF+GA 
Sbjct: 850  LERGMFRSEHVRSYKAEVDNKEAIGKKLKIEDSVNFGKTQSKIGRVDSLDDDGFPFIGAN 909

Query: 1023 LQTGDVVIGKFSESGADHSVKLKHTEKGVVQKVVLSSNDEGKNFAVVSLRQVRSPGLGDK 844
            LQ+GD++IGK++ESGADHSVKLKHTE+G+VQKV+LS+NDEGKNFAVVSLRQVRSP LGDK
Sbjct: 910  LQSGDIIIGKYAESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVSLRQVRSPCLGDK 969

Query: 843  FSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXX 664
            FSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQ              
Sbjct: 970  FSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGG 1029

Query: 663  AQKYATPFSTLSIDAIADQLQRLGFSRWGNERMYNGRTGEMIQTTVFMGPTFYQRLAHMA 484
             QKYATPFSTLS+DAI +QL   GFS+WGNER+YNGRTGEM Q  +FMGPTFYQRL HMA
Sbjct: 1030 GQKYATPFSTLSVDAIIEQLHGRGFSKWGNERVYNGRTGEMGQNLIFMGPTFYQRLIHMA 1089

Query: 483  EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANVHERLFTLSDSSE 304
            EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAAN+HERLFTLSDSS+
Sbjct: 1090 EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQ 1149

Query: 303  MYICCKCRNVANVIQRPVLGGRKIRGPFCRFCESAEDIVKVNVPHGAKLLCQELFSMGIS 124
            M++C KC+N+ANVIQR V GG K+RGP+CRFCES EDIVKVNVP+GAKLLCQELFSMGIS
Sbjct: 1150 MHVCGKCKNMANVIQRSVQGG-KVRGPYCRFCESVEDIVKVNVPYGAKLLCQELFSMGIS 1208

Query: 123  LKFDTD 106
            LKFDT+
Sbjct: 1209 LKFDTE 1214


>ref|XP_009787511.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 isoform X1
            [Nicotiana sylvestris]
          Length = 1226

 Score = 1193 bits (3086), Expect = 0.0
 Identities = 584/786 (74%), Positives = 656/786 (83%), Gaps = 1/786 (0%)
 Frame = -2

Query: 2460 DDFRNKXXXXXXXXXXXXLKVHLKHAERRMVKAIQRDLYGDHDLRGIETYVDASIISNGL 2281
            DDFRNK            L+ H+KHAERRM+KA+QRDLYGD  ++ IE Y+DASII+NGL
Sbjct: 440  DDFRNKRLELAGELLERELRAHIKHAERRMLKAMQRDLYGDRQVQPIEHYLDASIITNGL 499

Query: 2280 SRAFSTGAWSHPYKKMERVSGVVATLRRTNPLQMTADMRKTRQQVSYTGRVSDARYPHPS 2101
            SRAFSTG W HPYK+MERVSGVVAT+RRTNPLQMTADMRKTRQQV+YTG+V DARYPHPS
Sbjct: 500  SRAFSTGHWCHPYKRMERVSGVVATIRRTNPLQMTADMRKTRQQVTYTGKVGDARYPHPS 559

Query: 2100 HWGKICFLSTPDGENCGLVKNLASLGLVSTTXXXXXXXXXXXXXXXXXXXDTSSLMYEEH 1921
            HWGK+CFLSTPDGENCGLVKNLAS+GLVSTT                   D+++ ++ + 
Sbjct: 560  HWGKVCFLSTPDGENCGLVKNLASMGLVSTTILKPLLETLYRCGMQKLVDDSATSLHGKQ 619

Query: 1920 KIFLDGEWIGTCKDSALFVAEVKSKRWNKEIPQQVEIKRDEKHREIRVFSDAGRVLRPLL 1741
            K+ L+G+W+G C+DSA FV++++ KR   E+P QVE+KRDE+  E+R+FSDAGR+LRPLL
Sbjct: 620  KVLLNGDWVGICEDSAFFVSKLRRKRRRNEVPHQVEVKRDEQQGEVRMFSDAGRILRPLL 679

Query: 1740 VVGNLKRIKDLKGEVYSFQSLLDKXXXXXXXXXXXEDCVIAWEISFLYTGSKEKPPLKYT 1561
            VV NLK+IK LKG    FQSLLD            EDC  AW + +L T  KE PP KYT
Sbjct: 680  VVSNLKKIKALKGGDCGFQSLLDNGIIELIGPEEEEDCRTAWGVEYLLTADKENPPAKYT 739

Query: 1560 HCELDQSFLLALSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPRIRVDTNIHQLYY 1381
            HCELD SFLL LSCGIIPFANHDHARRVLYQSEKHSQQAIGFST NP IRVDTN HQLYY
Sbjct: 740  HCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNIRVDTNTHQLYY 799

Query: 1380 PQRPLFRTMLSDSLGKPSYPR-HRGMLPRPEYFNGQCAMVAVNVHLGYNQEDSLVMNRAS 1204
            PQRPLFRTMLSDSLGKP Y    +GMLPRPEY+NGQCA+VAVNVHLGYNQEDSLVMN AS
Sbjct: 800  PQRPLFRTMLSDSLGKPKYTHSQKGMLPRPEYYNGQCAIVAVNVHLGYNQEDSLVMNCAS 859

Query: 1203 LERGMFRSEHIRSYKSDVDEMENVGKRHRTEDFVKFGKMSSNIGRVDSLDDDGFPFVGAR 1024
            LERGMFRSEH+RSYK++VD  E +GK+ + ED V FGK  S IGRVDSLDDDGFPF+GA 
Sbjct: 860  LERGMFRSEHVRSYKAEVDNKEAIGKKLKIEDSVNFGKTQSKIGRVDSLDDDGFPFIGAN 919

Query: 1023 LQTGDVVIGKFSESGADHSVKLKHTEKGVVQKVVLSSNDEGKNFAVVSLRQVRSPGLGDK 844
            LQ+GD++IGK++ESGADHSVKLKHTE+G+VQKV+LS+NDEGKNFAVVSLRQVRSP LGDK
Sbjct: 920  LQSGDIIIGKYAESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVSLRQVRSPCLGDK 979

Query: 843  FSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXX 664
            FSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQ              
Sbjct: 980  FSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGG 1039

Query: 663  AQKYATPFSTLSIDAIADQLQRLGFSRWGNERMYNGRTGEMIQTTVFMGPTFYQRLAHMA 484
             QKYATPFSTLS+DAI +QL   GFS+WGNER+YNGRTGEM Q  +FMGPTFYQRL HMA
Sbjct: 1040 GQKYATPFSTLSVDAIIEQLHGRGFSKWGNERVYNGRTGEMGQNLIFMGPTFYQRLIHMA 1099

Query: 483  EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANVHERLFTLSDSSE 304
            EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAAN+HERLFTLSDSS+
Sbjct: 1100 EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQ 1159

Query: 303  MYICCKCRNVANVIQRPVLGGRKIRGPFCRFCESAEDIVKVNVPHGAKLLCQELFSMGIS 124
            M++C KC+N+ANVIQR V GG K+RGP+CRFCES EDIVKVNVP+GAKLLCQELFSMGIS
Sbjct: 1160 MHVCGKCKNMANVIQRSVQGG-KVRGPYCRFCESVEDIVKVNVPYGAKLLCQELFSMGIS 1218

Query: 123  LKFDTD 106
            LKFDT+
Sbjct: 1219 LKFDTE 1224


>ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1217

 Score = 1192 bits (3085), Expect = 0.0
 Identities = 585/786 (74%), Positives = 655/786 (83%), Gaps = 1/786 (0%)
 Frame = -2

Query: 2460 DDFRNKXXXXXXXXXXXXLKVHLKHAERRMVKAIQRDLYGDHDLRGIETYVDASIISNGL 2281
            DDFRNK            L+ H+KHAERRMVKA+QRDLYGD  ++ IE Y+DASII+NGL
Sbjct: 431  DDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIEHYLDASIITNGL 490

Query: 2280 SRAFSTGAWSHPYKKMERVSGVVATLRRTNPLQMTADMRKTRQQVSYTGRVSDARYPHPS 2101
            SRAFSTG W HPYK+MERVSGVVATLRRTNPLQMTADMRK+RQQV+YTG+V DARYPHPS
Sbjct: 491  SRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQVTYTGKVGDARYPHPS 550

Query: 2100 HWGKICFLSTPDGENCGLVKNLASLGLVSTTXXXXXXXXXXXXXXXXXXXDTSSLMYEEH 1921
            HWGK+CFLSTPDGENCGLVKNLAS+GLVST                    D ++ ++ + 
Sbjct: 551  HWGKLCFLSTPDGENCGLVKNLASMGLVSTIILKPFLETLFRCGMQKLVDDCATSLHGKQ 610

Query: 1920 KIFLDGEWIGTCKDSALFVAEVKSKRWNKEIPQQVEIKRDEKHREIRVFSDAGRVLRPLL 1741
            K+ LDGEW+G C+DSALFV++++ KR   E+P QVE+KRDE   E+R+FSD+GR+LRPLL
Sbjct: 611  KVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDELQGEVRIFSDSGRILRPLL 670

Query: 1740 VVGNLKRIKDLKGEVYSFQSLLDKXXXXXXXXXXXEDCVIAWEISFLYTGSKEKPPLKYT 1561
            VV NLK+IK LKG  Y FQSLLD            EDC  AW + ++    KE PP KYT
Sbjct: 671  VVSNLKKIKALKGGDYGFQSLLDNGIIEFIGPEEEEDCRTAWGVEYILKADKENPPAKYT 730

Query: 1560 HCELDQSFLLALSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPRIRVDTNIHQLYY 1381
            HCELD SFLL LSCGIIPFANHDHARRVLYQSEKHSQQAIGFST NP  RVDTN HQLYY
Sbjct: 731  HCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNNRVDTNTHQLYY 790

Query: 1380 PQRPLFRTMLSDSLGKPSYPRH-RGMLPRPEYFNGQCAMVAVNVHLGYNQEDSLVMNRAS 1204
            PQRPLFRTML+DSLGKP   ++ +GMLPRPEYFNGQCA+VAVNVHLGYNQEDSLVMNRAS
Sbjct: 791  PQRPLFRTMLADSLGKPKCTQYQKGMLPRPEYFNGQCAIVAVNVHLGYNQEDSLVMNRAS 850

Query: 1203 LERGMFRSEHIRSYKSDVDEMENVGKRHRTEDFVKFGKMSSNIGRVDSLDDDGFPFVGAR 1024
            LERGMFRSEH+RSYK++VD  E + K+ + ED V FGK  S IGRVDSLDDDGFPF+GA 
Sbjct: 851  LERGMFRSEHVRSYKAEVDNKEAMAKKLKIEDSVNFGKTQSKIGRVDSLDDDGFPFIGAN 910

Query: 1023 LQTGDVVIGKFSESGADHSVKLKHTEKGVVQKVVLSSNDEGKNFAVVSLRQVRSPGLGDK 844
            LQ+GD++IGKF+ESGADHSVKLKHTE+G+VQKV+LS+NDEGKNFAVVSLRQVRSP LGDK
Sbjct: 911  LQSGDIIIGKFAESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVSLRQVRSPCLGDK 970

Query: 843  FSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXX 664
            FSSMHGQKGVLGFLESQENFPFT QGIVPDIVINPHAFPSRQTPGQ              
Sbjct: 971  FSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGG 1030

Query: 663  AQKYATPFSTLSIDAIADQLQRLGFSRWGNERMYNGRTGEMIQTTVFMGPTFYQRLAHMA 484
             QKYATPFSTLS+DAI +QLQ  GF+RWGNER+YNGRTGEM+ + +FMGPTFYQRL HMA
Sbjct: 1031 GQKYATPFSTLSVDAIMEQLQGRGFTRWGNERVYNGRTGEMVHSLIFMGPTFYQRLIHMA 1090

Query: 483  EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANVHERLFTLSDSSE 304
            EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAAN+HERLFTLSDSS+
Sbjct: 1091 EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQ 1150

Query: 303  MYICCKCRNVANVIQRPVLGGRKIRGPFCRFCESAEDIVKVNVPHGAKLLCQELFSMGIS 124
            M+IC KC+N+ANVIQR V GG K+RGPFCRFCES EDIVKVNVP+GAKLLCQELFSMGIS
Sbjct: 1151 MHICGKCKNMANVIQRTVQGG-KVRGPFCRFCESVEDIVKVNVPYGAKLLCQELFSMGIS 1209

Query: 123  LKFDTD 106
            LKFDT+
Sbjct: 1210 LKFDTE 1215


>gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhododendron macrophyllum]
          Length = 1019

 Score = 1192 bits (3084), Expect = 0.0
 Identities = 588/786 (74%), Positives = 654/786 (83%), Gaps = 1/786 (0%)
 Frame = -2

Query: 2460 DDFRNKXXXXXXXXXXXXLKVHLKHAERRMVKAIQRDLYGDHDLRGIETYVDASIISNGL 2281
            DDFRNK            L+VH+KHAERRMVKA+QRDLYG+  +  IE Y+DASII+NGL
Sbjct: 232  DDFRNKRLELAGELLERELRVHVKHAERRMVKAMQRDLYGERVIHAIEHYLDASIITNGL 291

Query: 2280 SRAFSTGAWSHPYKKMERVSGVVATLRRTNPLQMTADMRKTRQQVSYTGRVSDARYPHPS 2101
            SRAFSTGAWSHPYKKMER+SGVVATLRRTNPLQ  ADMRKTRQQVSYTG+V DARYPHPS
Sbjct: 292  SRAFSTGAWSHPYKKMERISGVVATLRRTNPLQTIADMRKTRQQVSYTGKVGDARYPHPS 351

Query: 2100 HWGKICFLSTPDGENCGLVKNLASLGLVSTTXXXXXXXXXXXXXXXXXXXDTSSLMYEEH 1921
            HWGKICFLSTPDGENCGLVKNLA  GLVST                    DTS+L+  + 
Sbjct: 352  HWGKICFLSTPDGENCGLVKNLAITGLVSTNIEEHFLDKLLDSGMEKLVDDTSTLLSGKV 411

Query: 1920 KIFLDGEWIGTCKDSALFVAEVKSKRWNKEIPQQVEIKRDEKHREIRVFSDAGRVLRPLL 1741
            K+FLDG W+G C DS  FVA ++ KR  KE+P QVEIKRDE+HRE+RVFSDAGR+LRPLL
Sbjct: 412  KVFLDGNWVGVCGDSVSFVAALRRKRRRKEVPHQVEIKRDEQHREVRVFSDAGRILRPLL 471

Query: 1740 VVGNLKRIKDLKGEVYSFQSLLDKXXXXXXXXXXXEDCVIAWEISFLYTGSKEKPPLKYT 1561
            VV NL +IK  KG  YSFQSLLDK           EDC  AW I++L+  ++ K  +KYT
Sbjct: 472  VVENLGKIKASKGGDYSFQSLLDKGVIEFIGTEEEEDCRTAWGINYLFMENEAKATVKYT 531

Query: 1560 HCELDQSFLLALSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPRIRVDTNIHQLYY 1381
            HCELD SFLL LS  IIPFANHDHARRVLYQSEKHSQQA+GF+TTNP IRVDTN HQLYY
Sbjct: 532  HCELDMSFLLGLSAAIIPFANHDHARRVLYQSEKHSQQAMGFNTTNPNIRVDTNTHQLYY 591

Query: 1380 PQRPLFRTMLSDSLGKPSYPR-HRGMLPRPEYFNGQCAMVAVNVHLGYNQEDSLVMNRAS 1204
            PQRPLFRTM+SD LGKP YP  H G++PR EYFNGQCA+VAVNVHLGYNQEDSLVMNRAS
Sbjct: 592  PQRPLFRTMVSDCLGKPGYPLGHNGIVPRAEYFNGQCAIVAVNVHLGYNQEDSLVMNRAS 651

Query: 1203 LERGMFRSEHIRSYKSDVDEMENVGKRHRTEDFVKFGKMSSNIGRVDSLDDDGFPFVGAR 1024
            LERGMFRSEHIRSYK+DVD  E+VGK+ + ED V FGK+ S IGRVDSLDDDGFPF+GA 
Sbjct: 652  LERGMFRSEHIRSYKADVDNKESVGKKPKFEDSVNFGKVQSKIGRVDSLDDDGFPFIGAN 711

Query: 1023 LQTGDVVIGKFSESGADHSVKLKHTEKGVVQKVVLSSNDEGKNFAVVSLRQVRSPGLGDK 844
            LQ GD+V+G+ +ESGADHS+KLKHTE+G+VQKVVLS+NDEGKNFAVVSLRQVR+P LGDK
Sbjct: 712  LQNGDIVVGRCAESGADHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRTPCLGDK 771

Query: 843  FSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXX 664
            FSSMHGQKGVLGFLESQENFPFT QGIVPDIV+NPHAFPSRQTPGQ              
Sbjct: 772  FSSMHGQKGVLGFLESQENFPFTIQGIVPDIVVNPHAFPSRQTPGQLLEAALGKGIACGG 831

Query: 663  AQKYATPFSTLSIDAIADQLQRLGFSRWGNERMYNGRTGEMIQTTVFMGPTFYQRLAHMA 484
             QKYATPFSTLS+DA+ DQL R GFSRWG+ER+YNGRTGEMI + VFMGPTFYQRL HM+
Sbjct: 832  LQKYATPFSTLSVDAVTDQLHRAGFSRWGSERVYNGRTGEMIHSLVFMGPTFYQRLTHMS 891

Query: 483  EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANVHERLFTLSDSSE 304
            EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAAN+HERLFTLSDSS+
Sbjct: 892  EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQ 951

Query: 303  MYICCKCRNVANVIQRPVLGGRKIRGPFCRFCESAEDIVKVNVPHGAKLLCQELFSMGIS 124
            M+IC KC N+ANVIQR V GGRKIRGP+CRFCES E+IV+VNVP+GAKLL QELFSMGI+
Sbjct: 952  MHICRKCNNIANVIQRAVPGGRKIRGPYCRFCESVEEIVRVNVPYGAKLLAQELFSMGIT 1011

Query: 123  LKFDTD 106
            +KFDT+
Sbjct: 1012 MKFDTE 1017


>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Vitis vinifera] gi|731386102|ref|XP_010648748.1|
            PREDICTED: DNA-directed RNA polymerases IV and V subunit
            2-like [Vitis vinifera]
          Length = 1198

 Score = 1186 bits (3067), Expect = 0.0
 Identities = 577/785 (73%), Positives = 661/785 (84%), Gaps = 1/785 (0%)
 Frame = -2

Query: 2460 DDFRNKXXXXXXXXXXXXLKVHLKHAERRMVKAIQRDLYGDHDLRGIETYVDASIISNGL 2281
            DDFRNK            L+VH++HAERRMVKA+QR+LYGD DLR IE Y+DASII+NGL
Sbjct: 412  DDFRNKRLELAGELLERELRVHIRHAERRMVKAMQRELYGDRDLRPIENYLDASIITNGL 471

Query: 2280 SRAFSTGAWSHPYKKMERVSGVVATLRRTNPLQMTADMRKTRQQVSYTGRVSDARYPHPS 2101
            SRAFSTG WSHP+K+MER+SGVVATLRRTNPLQMTADMRKTRQQV YTG+V DARYPHPS
Sbjct: 472  SRAFSTGQWSHPFKRMERISGVVATLRRTNPLQMTADMRKTRQQVQYTGKVGDARYPHPS 531

Query: 2100 HWGKICFLSTPDGENCGLVKNLASLGLVSTTXXXXXXXXXXXXXXXXXXXDTSSLMYEEH 1921
            HWGK+CFLSTPDGENCGLVKNLA  GLVST                    DTS+ +  ++
Sbjct: 532  HWGKVCFLSTPDGENCGLVKNLAITGLVSTEVLDPLVDKLFDCGMEKLVDDTSTKLSGKN 591

Query: 1920 KIFLDGEWIGTCKDSALFVAEVKSKRWNKEIPQQVEIKRDEKHREIRVFSDAGRVLRPLL 1741
            K+FLDG+W+G C+D   FV E+++KR +KE+PQQVEIKRDE+  E+R+FSDAGR+LRPLL
Sbjct: 592  KVFLDGDWVGVCEDPISFVVELRTKRRHKELPQQVEIKRDEQQGEVRIFSDAGRILRPLL 651

Query: 1740 VVGNLKRIKDLKGEVYSFQSLLDKXXXXXXXXXXXEDCVIAWEISFLYTGSKEKPPLKYT 1561
            VV NLK++K  KG+ ++FQSLLDK           EDC  AW I +L  G  + PP+KYT
Sbjct: 652  VVENLKKVKTFKGDDFTFQSLLDKGIVELIGAEEEEDCSTAWGIKYLLKGHDD-PPVKYT 710

Query: 1560 HCELDQSFLLALSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPRIRVDTNIHQLYY 1381
            HCELD SFLL LSCGIIP+ANHDHARRVLYQSEKHSQQAIGFSTTNP IRVDT  HQLYY
Sbjct: 711  HCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQLYY 770

Query: 1380 PQRPLFRTMLSDSLGKPSYPR-HRGMLPRPEYFNGQCAMVAVNVHLGYNQEDSLVMNRAS 1204
            PQRPLFRTM+SD LGKP Y   H+G++PRPEYFNGQ A+VAVNVHLGYNQEDSLVMNRAS
Sbjct: 771  PQRPLFRTMISDCLGKPGYSEGHKGIVPRPEYFNGQIAIVAVNVHLGYNQEDSLVMNRAS 830

Query: 1203 LERGMFRSEHIRSYKSDVDEMENVGKRHRTEDFVKFGKMSSNIGRVDSLDDDGFPFVGAR 1024
            LERGMFRSEHIRSYKS+VD  E++ K+ ++ED V FGKM S IGRVDSLDDDGFPF+GA 
Sbjct: 831  LERGMFRSEHIRSYKSEVDNNESLDKKRKSEDSVHFGKMQSKIGRVDSLDDDGFPFIGAN 890

Query: 1023 LQTGDVVIGKFSESGADHSVKLKHTEKGVVQKVVLSSNDEGKNFAVVSLRQVRSPGLGDK 844
            LQ GD+VIG+ +ESG DHS+KLKHTE+G+VQKVV+S+ND+GKNFAVVSLRQVR+P LGDK
Sbjct: 891  LQNGDIVIGRCAESGVDHSIKLKHTERGMVQKVVVSANDDGKNFAVVSLRQVRTPCLGDK 950

Query: 843  FSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXX 664
            FSSMHGQKGVLGFLESQENFPFT QGIVPDIVINPHAFPSRQTPGQ              
Sbjct: 951  FSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGG 1010

Query: 663  AQKYATPFSTLSIDAIADQLQRLGFSRWGNERMYNGRTGEMIQTTVFMGPTFYQRLAHMA 484
              ++ATPFSTLS+DAIADQL R GFSRWG+ER+YNGRTGEM+++ +FMGPTFYQRL HMA
Sbjct: 1011 LLRHATPFSTLSVDAIADQLHRAGFSRWGHERVYNGRTGEMLRSLIFMGPTFYQRLIHMA 1070

Query: 483  EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANVHERLFTLSDSSE 304
            EDKVKFRNTGPVHPLTRQPV+DRKRFGGIKFGEMERDCLIAHGAAAN+HERLFTLSDS+ 
Sbjct: 1071 EDKVKFRNTGPVHPLTRQPVSDRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSAY 1130

Query: 303  MYICCKCRNVANVIQRPVLGGRKIRGPFCRFCESAEDIVKVNVPHGAKLLCQELFSMGIS 124
            M+IC +C+N++NVIQR V GGRK+RGP+CR+CES+E+IVKVNVP+GAKLLCQELFSMGIS
Sbjct: 1131 MHICRRCKNISNVIQRSVAGGRKVRGPYCRYCESSEEIVKVNVPYGAKLLCQELFSMGIS 1190

Query: 123  LKFDT 109
            LKF+T
Sbjct: 1191 LKFET 1195


>ref|XP_010325603.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            isoform X1 [Solanum lycopersicum]
          Length = 1225

 Score = 1181 bits (3055), Expect = 0.0
 Identities = 580/790 (73%), Positives = 651/790 (82%), Gaps = 5/790 (0%)
 Frame = -2

Query: 2460 DDFRNKXXXXXXXXXXXXLKVHLKHAERRMVKAIQRDLYGDHDLRGIETYVDASIISNGL 2281
            DDFRNK            L+VH+KHAERRMVKA+QRDL GD  +  IE Y+DASII+NGL
Sbjct: 435  DDFRNKRLDLAGELLERELRVHIKHAERRMVKALQRDLCGDRQVHPIEHYLDASIITNGL 494

Query: 2280 SRAFSTGAWSHPYKKMERVSGVVATLRRTNPLQMTADMRKTRQQVSYTGRVSDARYPHPS 2101
            SRAFSTG W HPYK+MERVSGVVATLRRTNPLQMTAD+RKTRQQV+YTG+V DARYP+PS
Sbjct: 495  SRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADLRKTRQQVTYTGKVGDARYPNPS 554

Query: 2100 HWGKICFLSTPDGENCGLVKNLASLGLVSTTXXXXXXXXXXXXXXXXXXXDTSSLMYEEH 1921
            HWGK+CFLSTPDGENCGLVKNLAS+GLVSTT                   D ++ ++ + 
Sbjct: 555  HWGKVCFLSTPDGENCGLVKNLASMGLVSTTVLMPLLETLFRCGMQKLVDDCATSLHGKQ 614

Query: 1920 KIFLDGEWIGTCKDSALFVAEVKSKRWNKEIPQQVEIKRDEKHREIRVFSDAGRVLRPLL 1741
            K+ LDG+W+G C+DSALFV++++ KR   E+P QVE+KRDE+  E+R+FSDAGR++RPLL
Sbjct: 615  KVLLDGDWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDEQQDEVRIFSDAGRIMRPLL 674

Query: 1740 VVGNLKRIKDLKGEV----YSFQSLLDKXXXXXXXXXXXEDCVIAWEISFLYTGSKEKPP 1573
            VV NLK IK L G V    Y FQ+LLDK           EDC  AW + +L    KE PP
Sbjct: 675  VVSNLKNIKALNGGVKGGDYGFQTLLDKGIIELIGPEEEEDCRTAWGVEYLLKADKENPP 734

Query: 1572 LKYTHCELDQSFLLALSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPRIRVDTNIH 1393
            + YTHCELD SFLL LSCG+IPFANHDHARRVLYQSEKHSQQAIGFST NP IRVDTN H
Sbjct: 735  VNYTHCELDMSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNIRVDTNTH 794

Query: 1392 QLYYPQRPLFRTMLSDSLGKPSYPRH-RGMLPRPEYFNGQCAMVAVNVHLGYNQEDSLVM 1216
            QLYYPQRPLF TMLSDSLGKP   RH RGML RPEY+NGQCA+VAVNVHLGYNQEDS+VM
Sbjct: 795  QLYYPQRPLFGTMLSDSLGKPKCARHQRGMLSRPEYYNGQCAIVAVNVHLGYNQEDSVVM 854

Query: 1215 NRASLERGMFRSEHIRSYKSDVDEMENVGKRHRTEDFVKFGKMSSNIGRVDSLDDDGFPF 1036
            NRASLERGMFRSEH+RSYK++VD ME  GK+ + ED V FGK  S IGRVD LDDDG P+
Sbjct: 855  NRASLERGMFRSEHVRSYKAEVDNMEATGKKSKAEDSVNFGKTQSKIGRVDCLDDDGLPY 914

Query: 1035 VGARLQTGDVVIGKFSESGADHSVKLKHTEKGVVQKVVLSSNDEGKNFAVVSLRQVRSPG 856
            +GA LQ+GD++IGKF+ESGADHSVK+KHTEKG+VQKV+LS+NDEGKNFAVVSLRQVRSP 
Sbjct: 915  IGANLQSGDIIIGKFAESGADHSVKMKHTEKGMVQKVLLSANDEGKNFAVVSLRQVRSPC 974

Query: 855  LGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXX 676
            LGDKFSSMHGQKGVLG+LESQENFPFT QGIVPDIVINPHAFPSRQTPGQ          
Sbjct: 975  LGDKFSSMHGQKGVLGYLESQENFPFTVQGIVPDIVINPHAFPSRQTPGQLLEAALGKGI 1034

Query: 675  XXXXAQKYATPFSTLSIDAIADQLQRLGFSRWGNERMYNGRTGEMIQTTVFMGPTFYQRL 496
                 +KYATPFS LS+DAI  QL   GFSRWGNER+YNGRTGEM+ + +FMGPTFYQRL
Sbjct: 1035 ALGGGEKYATPFSALSVDAILKQLHGRGFSRWGNERVYNGRTGEMVHSLIFMGPTFYQRL 1094

Query: 495  AHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANVHERLFTLS 316
             HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAAN+HERLFTLS
Sbjct: 1095 IHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLS 1154

Query: 315  DSSEMYICCKCRNVANVIQRPVLGGRKIRGPFCRFCESAEDIVKVNVPHGAKLLCQELFS 136
            DSS+M+IC KC+N+ANVIQRPV GG K+RGPFCRFCES EDIVKV VP+GAKLLCQELFS
Sbjct: 1155 DSSQMHICGKCKNMANVIQRPVPGG-KVRGPFCRFCESVEDIVKVGVPYGAKLLCQELFS 1213

Query: 135  MGISLKFDTD 106
            MGISLKFDT+
Sbjct: 1214 MGISLKFDTE 1223


>ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            isoform X2 [Solanum lycopersicum]
          Length = 1219

 Score = 1181 bits (3055), Expect = 0.0
 Identities = 580/790 (73%), Positives = 651/790 (82%), Gaps = 5/790 (0%)
 Frame = -2

Query: 2460 DDFRNKXXXXXXXXXXXXLKVHLKHAERRMVKAIQRDLYGDHDLRGIETYVDASIISNGL 2281
            DDFRNK            L+VH+KHAERRMVKA+QRDL GD  +  IE Y+DASII+NGL
Sbjct: 429  DDFRNKRLDLAGELLERELRVHIKHAERRMVKALQRDLCGDRQVHPIEHYLDASIITNGL 488

Query: 2280 SRAFSTGAWSHPYKKMERVSGVVATLRRTNPLQMTADMRKTRQQVSYTGRVSDARYPHPS 2101
            SRAFSTG W HPYK+MERVSGVVATLRRTNPLQMTAD+RKTRQQV+YTG+V DARYP+PS
Sbjct: 489  SRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADLRKTRQQVTYTGKVGDARYPNPS 548

Query: 2100 HWGKICFLSTPDGENCGLVKNLASLGLVSTTXXXXXXXXXXXXXXXXXXXDTSSLMYEEH 1921
            HWGK+CFLSTPDGENCGLVKNLAS+GLVSTT                   D ++ ++ + 
Sbjct: 549  HWGKVCFLSTPDGENCGLVKNLASMGLVSTTVLMPLLETLFRCGMQKLVDDCATSLHGKQ 608

Query: 1920 KIFLDGEWIGTCKDSALFVAEVKSKRWNKEIPQQVEIKRDEKHREIRVFSDAGRVLRPLL 1741
            K+ LDG+W+G C+DSALFV++++ KR   E+P QVE+KRDE+  E+R+FSDAGR++RPLL
Sbjct: 609  KVLLDGDWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDEQQDEVRIFSDAGRIMRPLL 668

Query: 1740 VVGNLKRIKDLKGEV----YSFQSLLDKXXXXXXXXXXXEDCVIAWEISFLYTGSKEKPP 1573
            VV NLK IK L G V    Y FQ+LLDK           EDC  AW + +L    KE PP
Sbjct: 669  VVSNLKNIKALNGGVKGGDYGFQTLLDKGIIELIGPEEEEDCRTAWGVEYLLKADKENPP 728

Query: 1572 LKYTHCELDQSFLLALSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPRIRVDTNIH 1393
            + YTHCELD SFLL LSCG+IPFANHDHARRVLYQSEKHSQQAIGFST NP IRVDTN H
Sbjct: 729  VNYTHCELDMSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNIRVDTNTH 788

Query: 1392 QLYYPQRPLFRTMLSDSLGKPSYPRH-RGMLPRPEYFNGQCAMVAVNVHLGYNQEDSLVM 1216
            QLYYPQRPLF TMLSDSLGKP   RH RGML RPEY+NGQCA+VAVNVHLGYNQEDS+VM
Sbjct: 789  QLYYPQRPLFGTMLSDSLGKPKCARHQRGMLSRPEYYNGQCAIVAVNVHLGYNQEDSVVM 848

Query: 1215 NRASLERGMFRSEHIRSYKSDVDEMENVGKRHRTEDFVKFGKMSSNIGRVDSLDDDGFPF 1036
            NRASLERGMFRSEH+RSYK++VD ME  GK+ + ED V FGK  S IGRVD LDDDG P+
Sbjct: 849  NRASLERGMFRSEHVRSYKAEVDNMEATGKKSKAEDSVNFGKTQSKIGRVDCLDDDGLPY 908

Query: 1035 VGARLQTGDVVIGKFSESGADHSVKLKHTEKGVVQKVVLSSNDEGKNFAVVSLRQVRSPG 856
            +GA LQ+GD++IGKF+ESGADHSVK+KHTEKG+VQKV+LS+NDEGKNFAVVSLRQVRSP 
Sbjct: 909  IGANLQSGDIIIGKFAESGADHSVKMKHTEKGMVQKVLLSANDEGKNFAVVSLRQVRSPC 968

Query: 855  LGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXX 676
            LGDKFSSMHGQKGVLG+LESQENFPFT QGIVPDIVINPHAFPSRQTPGQ          
Sbjct: 969  LGDKFSSMHGQKGVLGYLESQENFPFTVQGIVPDIVINPHAFPSRQTPGQLLEAALGKGI 1028

Query: 675  XXXXAQKYATPFSTLSIDAIADQLQRLGFSRWGNERMYNGRTGEMIQTTVFMGPTFYQRL 496
                 +KYATPFS LS+DAI  QL   GFSRWGNER+YNGRTGEM+ + +FMGPTFYQRL
Sbjct: 1029 ALGGGEKYATPFSALSVDAILKQLHGRGFSRWGNERVYNGRTGEMVHSLIFMGPTFYQRL 1088

Query: 495  AHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANVHERLFTLS 316
             HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAAN+HERLFTLS
Sbjct: 1089 IHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLS 1148

Query: 315  DSSEMYICCKCRNVANVIQRPVLGGRKIRGPFCRFCESAEDIVKVNVPHGAKLLCQELFS 136
            DSS+M+IC KC+N+ANVIQRPV GG K+RGPFCRFCES EDIVKV VP+GAKLLCQELFS
Sbjct: 1149 DSSQMHICGKCKNMANVIQRPVPGG-KVRGPFCRFCESVEDIVKVGVPYGAKLLCQELFS 1207

Query: 135  MGISLKFDTD 106
            MGISLKFDT+
Sbjct: 1208 MGISLKFDTE 1217


>gb|AAY68200.1| RNA polymerase IV second largest subunit [Antirrhinum majus]
          Length = 821

 Score = 1177 bits (3044), Expect = 0.0
 Identities = 576/788 (73%), Positives = 655/788 (83%), Gaps = 3/788 (0%)
 Frame = -2

Query: 2460 DDFRNKXXXXXXXXXXXXLKVHLKHAERRMVKAIQRDLYGDHDLRGIETYVDASIISNGL 2281
            DDFRNK            L+VH+KHAERRM KA+QRDLY D +++ I++Y+DASII+NGL
Sbjct: 33   DDFRNKRLELAGELLERELRVHIKHAERRMTKAMQRDLYRDREIQSIDSYLDASIITNGL 92

Query: 2280 SRAFSTGAWSHPYKKMERVSGVVATLRRTNPLQMTADMRKTRQQVSYTGRVSDARYPHPS 2101
            SRAFSTGAWSHPYK+MER+SGVVATLRRTNPLQ  ADMRKTRQQVSYTGRV DARYPHPS
Sbjct: 93   SRAFSTGAWSHPYKRMERISGVVATLRRTNPLQTMADMRKTRQQVSYTGRVGDARYPHPS 152

Query: 2100 HWGKICFLSTPDGENCGLVKNLASLGLVSTTXXXXXXXXXXXXXXXXXXXD--TSSLMYE 1927
            HWGKICFLSTPDGENCGLVKNLAS+GLVST                       TSS++  
Sbjct: 153  HWGKICFLSTPDGENCGLVKNLASMGLVSTNVLEQESLLRQFHVCGMEKLVDDTSSVLEG 212

Query: 1926 EHKIFLDGEWIGTCKDSALFVAEVKSKRWNKEIPQQVEIKRDEKHREIRVFSDAGRVLRP 1747
            +HK FLDGEW+G CKDS  FVA+++ KR   E+P QVEIKRD +HRE+R+F+DAGR+LRP
Sbjct: 213  KHKAFLDGEWVGMCKDSKSFVAKLRRKRRMMEMPYQVEIKRDVRHREVRIFADAGRILRP 272

Query: 1746 LLVVGNLKRIKDLKGEVYSFQSLLDKXXXXXXXXXXXEDCVIAWEISFLYTGSKEKPPLK 1567
            LL+V  LK+IK+LKGE +SFQSLLD            EDC  AW I +L++  KEKP +K
Sbjct: 273  LLLVQKLKKIKELKGE-FSFQSLLDNGIVEFIGAEEEEDCRTAWGIKYLFSADKEKPLVK 331

Query: 1566 YTHCELDQSFLLALSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPRIRVDTNIHQL 1387
            YTHCELD SFLL LSCG+IPFANHDHARRVLYQSEKHSQQAIGFSTTNP IRVDTN H L
Sbjct: 332  YTHCELDCSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGFSTTNPSIRVDTNSHNL 391

Query: 1386 YYPQRPLFRTMLSDSLGKPSYP-RHRGMLPRPEYFNGQCAMVAVNVHLGYNQEDSLVMNR 1210
            YYPQRP+F TMLSDSLGK  Y   H+GMLP PE+FNGQCA+VAVNVHLGYNQEDS+VMNR
Sbjct: 392  YYPQRPIFGTMLSDSLGKSKYSSHHKGMLPHPEFFNGQCAIVAVNVHLGYNQEDSIVMNR 451

Query: 1209 ASLERGMFRSEHIRSYKSDVDEMENVGKRHRTEDFVKFGKMSSNIGRVDSLDDDGFPFVG 1030
            AS+ERGMFR+EH+RSYK++VD  +  GK+ + +D V FGK  S IGRVDSLDDDGFPF+G
Sbjct: 452  ASMERGMFRTEHVRSYKAEVDNSDAPGKKLKPDDLVDFGKTESKIGRVDSLDDDGFPFIG 511

Query: 1029 ARLQTGDVVIGKFSESGADHSVKLKHTEKGVVQKVVLSSNDEGKNFAVVSLRQVRSPGLG 850
            A LQTGD+VIGK + SG DHS+KLKHTE+G+VQKVVLSSND+GKNF VVSLRQVRSP LG
Sbjct: 512  ANLQTGDIVIGKHAASGVDHSIKLKHTERGMVQKVVLSSNDDGKNFGVVSLRQVRSPCLG 571

Query: 849  DKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXX 670
            DKFSSMHGQKGVLGFLESQENFPFT +GIVPDIVINPHAFPSRQTPGQ            
Sbjct: 572  DKFSSMHGQKGVLGFLESQENFPFTKEGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAL 631

Query: 669  XXAQKYATPFSTLSIDAIADQLQRLGFSRWGNERMYNGRTGEMIQTTVFMGPTFYQRLAH 490
              A KYATPFST S+D I  QL RLGFSRWG+ER+Y+GRTGE +++ +FMGPTFYQRL H
Sbjct: 632  GGALKYATPFSTPSVDDITAQLHRLGFSRWGDERVYDGRTGEKVESLIFMGPTFYQRLTH 691

Query: 489  MAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANVHERLFTLSDS 310
            MAEDK+KFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAAN+HERLFTLSDS
Sbjct: 692  MAEDKIKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDS 751

Query: 309  SEMYICCKCRNVANVIQRPVLGGRKIRGPFCRFCESAEDIVKVNVPHGAKLLCQELFSMG 130
            S+M++C KC+N+ANVIQR V GGRKIRGP+CRFC+S ED+V++NVP+GAKLLCQELFSMG
Sbjct: 752  SQMHVCRKCQNMANVIQRSVFGGRKIRGPYCRFCDSVEDVVRLNVPYGAKLLCQELFSMG 811

Query: 129  ISLKFDTD 106
            ISLKFDT+
Sbjct: 812  ISLKFDTE 819


>ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1219

 Score = 1173 bits (3035), Expect = 0.0
 Identities = 574/790 (72%), Positives = 652/790 (82%), Gaps = 5/790 (0%)
 Frame = -2

Query: 2460 DDFRNKXXXXXXXXXXXXLKVHLKHAERRMVKAIQRDLYGDHDLRGIETYVDASIISNGL 2281
            DDFRNK            L+ H+KHAERRMVKA+QRDL GD  ++ +E Y+DASII+NGL
Sbjct: 429  DDFRNKRLDLAGELLERELRAHIKHAERRMVKALQRDLCGDRQVQPLEHYLDASIITNGL 488

Query: 2280 SRAFSTGAWSHPYKKMERVSGVVATLRRTNPLQMTADMRKTRQQVSYTGRVSDARYPHPS 2101
            SRAFSTG W HPYK+MERVSGVVATLRRTNPLQMTAD+RKTRQQV+YTG+V DARYPHPS
Sbjct: 489  SRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADLRKTRQQVTYTGKVGDARYPHPS 548

Query: 2100 HWGKICFLSTPDGENCGLVKNLASLGLVSTTXXXXXXXXXXXXXXXXXXXDTSSLMYEEH 1921
            HWGK+CFLSTPDGENCGLVKNLAS+GLVSTT                   D+++ ++ + 
Sbjct: 549  HWGKVCFLSTPDGENCGLVKNLASMGLVSTTVLKPLLETLFRCGMQKLVDDSATSLHGKQ 608

Query: 1920 KIFLDGEWIGTCKDSALFVAEVKSKRWNKEIPQQVEIKRDEKHREIRVFSDAGRVLRPLL 1741
            K+ LDG+W+G C+DSALFV++++ KR   E+P QVE+KRDE+  E+R+FSDAGR++RPLL
Sbjct: 609  KVLLDGDWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDEQQDEVRIFSDAGRIMRPLL 668

Query: 1740 VVGNLKRIKDLK----GEVYSFQSLLDKXXXXXXXXXXXEDCVIAWEISFLYTGSKEKPP 1573
            VV NLK IK LK    G  Y FQ+LLDK           EDC  AW + +L    KE PP
Sbjct: 669  VVSNLKNIKSLKDGMKGGDYGFQTLLDKGIIELIGPEEEEDCRTAWGVEYLLKADKENPP 728

Query: 1572 LKYTHCELDQSFLLALSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPRIRVDTNIH 1393
            + YTHCELD SFLL LSCG+IPFANHDHARRVLYQSEKHSQQAIGFST NP  RVDTN H
Sbjct: 729  VNYTHCELDMSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNARVDTNTH 788

Query: 1392 QLYYPQRPLFRTMLSDSLGKPSYPRH-RGMLPRPEYFNGQCAMVAVNVHLGYNQEDSLVM 1216
            QLYYPQRPLF TMLSDSLGKP   RH +GML RPEY+NGQCA+VAVNVHLGYNQEDS+VM
Sbjct: 789  QLYYPQRPLFGTMLSDSLGKPKCGRHQKGMLSRPEYYNGQCAIVAVNVHLGYNQEDSVVM 848

Query: 1215 NRASLERGMFRSEHIRSYKSDVDEMENVGKRHRTEDFVKFGKMSSNIGRVDSLDDDGFPF 1036
            NRASLERGMFRSEH+RSYK++VD  E +GK+ + ED V FGK  S IGRVDSLDDDGFPF
Sbjct: 849  NRASLERGMFRSEHVRSYKAEVDNKEAMGKKSKVEDSVNFGKTQSKIGRVDSLDDDGFPF 908

Query: 1035 VGARLQTGDVVIGKFSESGADHSVKLKHTEKGVVQKVVLSSNDEGKNFAVVSLRQVRSPG 856
            +GA LQ+GD++IGK++ESGADHSVK+KHTE+G+VQKV+LS+ND+GKNFAVVSLRQVRSP 
Sbjct: 909  IGANLQSGDIIIGKYAESGADHSVKMKHTERGMVQKVLLSANDDGKNFAVVSLRQVRSPC 968

Query: 855  LGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXX 676
            LGDKFSSMHGQKGVLG+LESQENFPFT QGIVPDIVINPHAFPSRQTPGQ          
Sbjct: 969  LGDKFSSMHGQKGVLGYLESQENFPFTVQGIVPDIVINPHAFPSRQTPGQLLEAALGKGI 1028

Query: 675  XXXXAQKYATPFSTLSIDAIADQLQRLGFSRWGNERMYNGRTGEMIQTTVFMGPTFYQRL 496
                 +KYATPFS LS+DAI  QL   GFSRWG+ER+YNGRTGEM+ + +FMGPTFYQRL
Sbjct: 1029 ALGGGEKYATPFSALSVDAILKQLHGRGFSRWGSERVYNGRTGEMVHSLIFMGPTFYQRL 1088

Query: 495  AHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANVHERLFTLS 316
             HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAAN+HERLFTLS
Sbjct: 1089 IHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLS 1148

Query: 315  DSSEMYICCKCRNVANVIQRPVLGGRKIRGPFCRFCESAEDIVKVNVPHGAKLLCQELFS 136
            DSS+M+IC KC+N+ANVIQR   GG KIRGPFCRFCES EDIVKV+VP+GAKLLCQELFS
Sbjct: 1149 DSSQMHICGKCKNMANVIQRSAPGG-KIRGPFCRFCESVEDIVKVDVPYGAKLLCQELFS 1207

Query: 135  MGISLKFDTD 106
            MGISLKFDT+
Sbjct: 1208 MGISLKFDTE 1217


>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
          Length = 1220

 Score = 1165 bits (3014), Expect = 0.0
 Identities = 571/784 (72%), Positives = 652/784 (83%)
 Frame = -2

Query: 2460 DDFRNKXXXXXXXXXXXXLKVHLKHAERRMVKAIQRDLYGDHDLRGIETYVDASIISNGL 2281
            DDFRNK            L+VH++HAERRMVKA+QR+LYGD DLR IE Y+DASII+NGL
Sbjct: 448  DDFRNKRLELAGELLERELRVHIRHAERRMVKAMQRELYGDRDLRPIENYLDASIITNGL 507

Query: 2280 SRAFSTGAWSHPYKKMERVSGVVATLRRTNPLQMTADMRKTRQQVSYTGRVSDARYPHPS 2101
            SRAFSTG WSHP+K+MER+SGVVATLRRTNPLQMTADMRKTRQQV YTG+V DARYPHPS
Sbjct: 508  SRAFSTGQWSHPFKRMERISGVVATLRRTNPLQMTADMRKTRQQVQYTGKVGDARYPHPS 567

Query: 2100 HWGKICFLSTPDGENCGLVKNLASLGLVSTTXXXXXXXXXXXXXXXXXXXDTSSLMYEEH 1921
            HWGK+CFLSTPDGENCGLVKNLA  GLVST                    DTS+ +  ++
Sbjct: 568  HWGKVCFLSTPDGENCGLVKNLAITGLVSTEVLDPLVDKLFDCGMEKLVDDTSTKLSGKN 627

Query: 1920 KIFLDGEWIGTCKDSALFVAEVKSKRWNKEIPQQVEIKRDEKHREIRVFSDAGRVLRPLL 1741
            K+FLDG+W+G C+D   FV E+++KR +KE+PQQVEIKRDE+  E+R+FSDAGR+LRPLL
Sbjct: 628  KVFLDGDWVGVCEDPISFVVELRTKRRHKELPQQVEIKRDEQQGEVRIFSDAGRILRPLL 687

Query: 1740 VVGNLKRIKDLKGEVYSFQSLLDKXXXXXXXXXXXEDCVIAWEISFLYTGSKEKPPLKYT 1561
            VV NLK++K  KG+ ++FQSLLDK           EDC  AW I +L  G  + PP+KYT
Sbjct: 688  VVENLKKVKTFKGDDFTFQSLLDKGIVELIGAEEEEDCSTAWGIKYLLKGHDD-PPVKYT 746

Query: 1560 HCELDQSFLLALSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPRIRVDTNIHQLYY 1381
            HCELD SFLL LSCGIIP+ANHDHARRVLYQSEKHSQQAIGFSTTNP IRVDT  HQLYY
Sbjct: 747  HCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQLYY 806

Query: 1380 PQRPLFRTMLSDSLGKPSYPRHRGMLPRPEYFNGQCAMVAVNVHLGYNQEDSLVMNRASL 1201
            PQRPLFRTM+SD             LPRPEYFNGQ A+VAVNVHLGYNQEDSLVMNRASL
Sbjct: 807  PQRPLFRTMISD-------------LPRPEYFNGQIAIVAVNVHLGYNQEDSLVMNRASL 853

Query: 1200 ERGMFRSEHIRSYKSDVDEMENVGKRHRTEDFVKFGKMSSNIGRVDSLDDDGFPFVGARL 1021
            ERGMFRSEHIRSYKS+VD  E++ K+ ++ED V FGKM S IGRVDSLDDDGFPF+GA L
Sbjct: 854  ERGMFRSEHIRSYKSEVDNNESLDKKRKSEDSVHFGKMQSKIGRVDSLDDDGFPFIGANL 913

Query: 1020 QTGDVVIGKFSESGADHSVKLKHTEKGVVQKVVLSSNDEGKNFAVVSLRQVRSPGLGDKF 841
            Q GD+VIG+ +ESG DHS+KLKHTE+G+VQKVV+S+ND+GKNFAVVSLRQVR+P LGDKF
Sbjct: 914  QNGDIVIGRCAESGVDHSIKLKHTERGMVQKVVVSANDDGKNFAVVSLRQVRTPCLGDKF 973

Query: 840  SSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXXA 661
            SSMHGQKGVLGFLESQENFPFT QGIVPDIVINPHAFPSRQTPGQ               
Sbjct: 974  SSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGL 1033

Query: 660  QKYATPFSTLSIDAIADQLQRLGFSRWGNERMYNGRTGEMIQTTVFMGPTFYQRLAHMAE 481
             ++ATPFSTLS+DAIADQL R GFSRWG+ER+YNGRTGEM+++ +FMGPTFYQRL HMAE
Sbjct: 1034 LRHATPFSTLSVDAIADQLHRAGFSRWGHERVYNGRTGEMLRSLIFMGPTFYQRLIHMAE 1093

Query: 480  DKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANVHERLFTLSDSSEM 301
            DKVKFRNTGPVHPLTRQPV+DRKRFGGIKFGEMERDCLIAHGAAAN+HERLFTLSDS+ M
Sbjct: 1094 DKVKFRNTGPVHPLTRQPVSDRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSAYM 1153

Query: 300  YICCKCRNVANVIQRPVLGGRKIRGPFCRFCESAEDIVKVNVPHGAKLLCQELFSMGISL 121
            +IC +C+N++NVIQR V GGRK+RGP+CR+CES+E+IVKVNVP+GAKLLCQELFSMGISL
Sbjct: 1154 HICRRCKNISNVIQRSVAGGRKVRGPYCRYCESSEEIVKVNVPYGAKLLCQELFSMGISL 1213

Query: 120  KFDT 109
            KF+T
Sbjct: 1214 KFET 1217


>ref|XP_012076429.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Jatropha curcas] gi|802626342|ref|XP_012076430.1|
            PREDICTED: DNA-directed RNA polymerases IV and V subunit
            2-like [Jatropha curcas] gi|643724314|gb|KDP33515.1|
            hypothetical protein JCGZ_07086 [Jatropha curcas]
          Length = 1209

 Score = 1156 bits (2991), Expect = 0.0
 Identities = 568/785 (72%), Positives = 643/785 (81%), Gaps = 1/785 (0%)
 Frame = -2

Query: 2460 DDFRNKXXXXXXXXXXXXLKVHLKHAERRMVKAIQRDLYGDHDLRGIETYVDASIISNGL 2281
            D FRNK            LKVH+ HA RRM KA+Q+DLYGD D+R IE Y+DASI++NGL
Sbjct: 422  DSFRNKRFELAGELLDRELKVHIAHARRRMAKALQKDLYGDRDVRPIEHYLDASIVTNGL 481

Query: 2280 SRAFSTGAWSHPYKKMERVSGVVATLRRTNPLQMTADMRKTRQQVSYTGRVSDARYPHPS 2101
            SRAFSTGAWSHP+K+MER+SGVVA L RTNPLQ   D+RKTRQQV YTG+V DARYPHPS
Sbjct: 482  SRAFSTGAWSHPFKRMERISGVVANLGRTNPLQTMVDLRKTRQQVQYTGKVGDARYPHPS 541

Query: 2100 HWGKICFLSTPDGENCGLVKNLASLGLVSTTXXXXXXXXXXXXXXXXXXXDTSSLMYEEH 1921
            HWG++CFLSTPDGENCGLVKNLA  GLVST                    DT + + E++
Sbjct: 542  HWGRVCFLSTPDGENCGLVKNLAITGLVSTEILEPLIDILFDCGMDKLVDDTHTKLDEKY 601

Query: 1920 KIFLDGEWIGTCKDSALFVAEVKSKRWNKEIPQQVEIKRDEKHREIRVFSDAGRVLRPLL 1741
            K+FL+GEW+G C+DS LFVAE++  R  K++P+QVEIKRDE+ +E+R+F+DAGR+LRPLL
Sbjct: 602  KVFLNGEWVGVCEDSNLFVAELRRLRRRKKLPRQVEIKRDEQQKEVRIFADAGRILRPLL 661

Query: 1740 VVGNLKRIKDLKGEVYSFQSLLDKXXXXXXXXXXXEDCVIAWEISFLYTGSKEKPPLKYT 1561
            VV NL +IK  KG  Y+FQSLLDK           EDC  AW I FL  G  +K PLKYT
Sbjct: 662  VVENLHKIKAFKGGNYTFQSLLDKGIIEFIGTEEEEDCSTAWGIKFLVAGVDKKQPLKYT 721

Query: 1560 HCELDQSFLLALSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPRIRVDTNIHQLYY 1381
            HCELD SFLL LSCGIIPFANHDHARRVLYQ++KHSQQAIGF TTNP IRVDT  HQL+Y
Sbjct: 722  HCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFPTTNPNIRVDTLSHQLHY 781

Query: 1380 PQRPLFRTMLSDSLGKPSYPR-HRGMLPRPEYFNGQCAMVAVNVHLGYNQEDSLVMNRAS 1204
            PQRPLFRT+ +D LGKP Y R H GMLP+PE FNGQ A+VAVNVHLGYNQEDSLVMNRAS
Sbjct: 782  PQRPLFRTVTADCLGKPGYARGHHGMLPKPELFNGQNAIVAVNVHLGYNQEDSLVMNRAS 841

Query: 1203 LERGMFRSEHIRSYKSDVDEMENVGKRHRTEDFVKFGKMSSNIGRVDSLDDDGFPFVGAR 1024
            LERGMFRSEHIRSYK+DVD  E + KR + ED V FGK+ S IGRVDSLDDDGFPF+GA 
Sbjct: 842  LERGMFRSEHIRSYKADVDNKELLDKRRKFEDTVNFGKIQSKIGRVDSLDDDGFPFIGAN 901

Query: 1023 LQTGDVVIGKFSESGADHSVKLKHTEKGVVQKVVLSSNDEGKNFAVVSLRQVRSPGLGDK 844
            LQ+GD+VIG+F+ESGADHS+KLKHTE+G+VQKVVLSSNDEGKNFAVVSLRQVRSP LGDK
Sbjct: 902  LQSGDIVIGRFAESGADHSIKLKHTERGMVQKVVLSSNDEGKNFAVVSLRQVRSPCLGDK 961

Query: 843  FSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXX 664
            FSSMHGQKGVLGFLESQENFPFT  G+VPDIVINPHAFPSRQTPGQ              
Sbjct: 962  FSSMHGQKGVLGFLESQENFPFTKDGVVPDIVINPHAFPSRQTPGQLLEAALGKGIACGG 1021

Query: 663  AQKYATPFSTLSIDAIADQLQRLGFSRWGNERMYNGRTGEMIQTTVFMGPTFYQRLAHMA 484
              +YATPFSTLS++AI DQL R GFSRWGNE++ NGRTGEM+++ +FMGPTFYQRL HMA
Sbjct: 1022 PMRYATPFSTLSVEAITDQLHRAGFSRWGNEKVCNGRTGEMVRSLIFMGPTFYQRLIHMA 1081

Query: 483  EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANVHERLFTLSDSSE 304
            EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA+AN+HERLFTLSDSS+
Sbjct: 1082 EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQ 1141

Query: 303  MYICCKCRNVANVIQRPVLGGRKIRGPFCRFCESAEDIVKVNVPHGAKLLCQELFSMGIS 124
            M+IC  C+NVANVI+R V   RKIR P+CR CESA+DIVKVNVP+GAKLLCQELFSMGIS
Sbjct: 1142 MHICQNCKNVANVIERTVPPSRKIRAPYCRICESADDIVKVNVPYGAKLLCQELFSMGIS 1201

Query: 123  LKFDT 109
            LKF+T
Sbjct: 1202 LKFET 1206


>ref|XP_011036682.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Populus euphratica]
          Length = 1190

 Score = 1150 bits (2975), Expect = 0.0
 Identities = 567/785 (72%), Positives = 638/785 (81%), Gaps = 1/785 (0%)
 Frame = -2

Query: 2460 DDFRNKXXXXXXXXXXXXLKVHLKHAERRMVKAIQRDLYGDHDLRGIETYVDASIISNGL 2281
            D FRNK            LKVH+ HA RRM KA+QRDLYGD D+  IE Y+DASI++NGL
Sbjct: 403  DSFRNKRFELASELLERELKVHVSHALRRMTKALQRDLYGDRDVHPIEHYLDASIVTNGL 462

Query: 2280 SRAFSTGAWSHPYKKMERVSGVVATLRRTNPLQMTADMRKTRQQVSYTGRVSDARYPHPS 2101
            +RAFSTGAW HP+K MERVSGVV  L R NPLQ   D+RKTRQQV YTG+V DARYPHPS
Sbjct: 463  TRAFSTGAWCHPFKWMERVSGVVGNLGRANPLQTMIDLRKTRQQVLYTGKVGDARYPHPS 522

Query: 2100 HWGKICFLSTPDGENCGLVKNLASLGLVSTTXXXXXXXXXXXXXXXXXXXDTSSLMYEEH 1921
            HWG++CFLSTPDGENCGLVKNLA  G+VST                    DT + +  +H
Sbjct: 523  HWGRVCFLSTPDGENCGLVKNLAVTGVVSTNISESLVDKLFGSGMEKLVDDTYTKLDGKH 582

Query: 1920 KIFLDGEWIGTCKDSALFVAEVKSKRWNKEIPQQVEIKRDEKHREIRVFSDAGRVLRPLL 1741
            K+FL+GEW+G C+DS LFV E++S R  +E+P QVEIKRDE+ RE+R+FSDAGR+LRPLL
Sbjct: 583  KVFLNGEWVGVCEDSCLFVGELRSMRRRRELPYQVEIKRDEQQREVRIFSDAGRILRPLL 642

Query: 1740 VVGNLKRIKDLKGEVYSFQSLLDKXXXXXXXXXXXEDCVIAWEISFLYTGSKEKPPLKYT 1561
            VV NL +IK  KG  Y F SLLDK           EDC  AW I FL    + K P+KYT
Sbjct: 643  VVENLDKIKAFKGGNYIFTSLLDKGIIEFIGTEEEEDCCTAWGIKFLLADIEGKQPMKYT 702

Query: 1560 HCELDQSFLLALSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPRIRVDTNIHQLYY 1381
            HCELD SFLL LSCGIIPFANHDHARRVLYQ++KHSQQAIGFSTTNP IRVDT  HQL+Y
Sbjct: 703  HCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQLHY 762

Query: 1380 PQRPLFRTMLSDSLGKPSYPR-HRGMLPRPEYFNGQCAMVAVNVHLGYNQEDSLVMNRAS 1204
            PQRPLFRTM+SD LGKP YP  H  +LP+PE FNGQ A+VAVNVHLGYNQEDSLVMNRAS
Sbjct: 763  PQRPLFRTMISDCLGKPGYPLGHNAVLPKPELFNGQNAIVAVNVHLGYNQEDSLVMNRAS 822

Query: 1203 LERGMFRSEHIRSYKSDVDEMENVGKRHRTEDFVKFGKMSSNIGRVDSLDDDGFPFVGAR 1024
            LERGMFRSEHIRSYK++VD  E   KR ++ED + FGK+ S IGRVDSLDDDGFPF+GA 
Sbjct: 823  LERGMFRSEHIRSYKAEVDNKELTDKRRKSEDSITFGKIQSKIGRVDSLDDDGFPFIGAN 882

Query: 1023 LQTGDVVIGKFSESGADHSVKLKHTEKGVVQKVVLSSNDEGKNFAVVSLRQVRSPGLGDK 844
            +Q+GD+VIGK +ESGADHSVKLKHTE+G+VQKVVLSSNDEGKNFAVVSLRQVRSP LGDK
Sbjct: 883  MQSGDIVIGKCAESGADHSVKLKHTERGMVQKVVLSSNDEGKNFAVVSLRQVRSPCLGDK 942

Query: 843  FSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXX 664
            FSSMHGQKGVLGFLESQENFPFT QG+VPDIVINPHAFPSRQTPGQ              
Sbjct: 943  FSSMHGQKGVLGFLESQENFPFTIQGVVPDIVINPHAFPSRQTPGQLLEAALGKGIACGG 1002

Query: 663  AQKYATPFSTLSIDAIADQLQRLGFSRWGNERMYNGRTGEMIQTTVFMGPTFYQRLAHMA 484
            +++YATPFSTLS+D I DQL R  FSRWGNER+YNGRTGEM+++ +FMGPTFYQRL HMA
Sbjct: 1003 SKRYATPFSTLSVDDIIDQLHRAKFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLVHMA 1062

Query: 483  EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANVHERLFTLSDSSE 304
            EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA+AN+HERLFTLSDSSE
Sbjct: 1063 EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSE 1122

Query: 303  MYICCKCRNVANVIQRPVLGGRKIRGPFCRFCESAEDIVKVNVPHGAKLLCQELFSMGIS 124
            M+IC KC+NVANVIQR V GGRKIRGP+CR CES +D++KV+VP+GAKLLCQELFSMGIS
Sbjct: 1123 MHICQKCKNVANVIQRAVPGGRKIRGPYCRVCESVDDLIKVSVPYGAKLLCQELFSMGIS 1182

Query: 123  LKFDT 109
            LKFDT
Sbjct: 1183 LKFDT 1187


>ref|XP_012847152.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2
            [Erythranthe guttatus] gi|604317141|gb|EYU29217.1|
            hypothetical protein MIMGU_mgv1a000367mg [Erythranthe
            guttata]
          Length = 1211

 Score = 1150 bits (2974), Expect = 0.0
 Identities = 564/791 (71%), Positives = 651/791 (82%), Gaps = 6/791 (0%)
 Frame = -2

Query: 2460 DDFRNKXXXXXXXXXXXXLKVHLKHAERRMVKAIQRDLYGDHDLRGIETYVDASIISNGL 2281
            DDFRNK            L+VH+KHAERRM KA+QRDLY D +++ I+ Y+DASI++NGL
Sbjct: 420  DDFRNKRLELAGELLERELRVHIKHAERRMTKAMQRDLYRDREVQSIDQYLDASIVTNGL 479

Query: 2280 SRAFSTGAWSHPYKKMERVSGVVATLRRTNPLQMTADMRKTRQQVSYTGRVSDARYPHPS 2101
            SRAFSTGAW HP+K+MER SGVVAT+RRTNPLQ  ADMRKTRQQVSYTGRV DARYPHPS
Sbjct: 480  SRAFSTGAWCHPFKRMERTSGVVATIRRTNPLQAIADMRKTRQQVSYTGRVGDARYPHPS 539

Query: 2100 HWGKICFLSTPDGENCGLVKNLASLGLVSTTXXXXXXXXXXXXXXXXXXXD--TSSLMYE 1927
            HWGK+CFLSTPDGENCGLVKNLASLGLVST                       TS+L+  
Sbjct: 540  HWGKVCFLSTPDGENCGLVKNLASLGLVSTNLLAQGNLLKKFQQCGMEKMVDDTSNLLGG 599

Query: 1926 EHKIFLDGEWIGTCKDSALFVAEVKSKRWNKEIPQQVEIKRDEKHREIRVFSDAGRVLRP 1747
            +HK+FLDG+WIG CKDS+ FV++++ KR   EIP Q+EIKRD+ + E+R+F+D+GR+LRP
Sbjct: 600  KHKVFLDGDWIGICKDSSSFVSKLRRKRRRMEIPHQMEIKRDQHNGEVRIFNDSGRILRP 659

Query: 1746 LLVVGNLKRIKDLKGEVYSFQSLLDKXXXXXXXXXXXEDCVIAWEISFLYTGSKEKPPLK 1567
            LLVV NLK+IKDLKG  +SFQSLLD            EDC  AW + +L+T   E PP+K
Sbjct: 660  LLVVQNLKKIKDLKGN-FSFQSLLDNGIIELIGAEEEEDCQTAWGVRYLFTAELENPPVK 718

Query: 1566 YTHCELDQSFLLALSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPRIRVDTNIHQL 1387
            YTHCELD SFLL LSCGI+PF NHDHARRVLYQSEKHSQQAIG+STTN  IRVDTN H L
Sbjct: 719  YTHCELDSSFLLGLSCGIVPFTNHDHARRVLYQSEKHSQQAIGYSTTNSIIRVDTNSHSL 778

Query: 1386 YYPQRPLFRTMLSDSLGKPSYPRH-RGMLPRPEYFNGQCAMVAVNVHLGYNQEDSLVMNR 1210
            YYPQRPLFRT+LSDSLG+ ++  H +GM+PRPE++NGQCA+VA+NVHLGYNQEDSLVMNR
Sbjct: 779  YYPQRPLFRTVLSDSLGRSTFSDHYKGMIPRPEFYNGQCAIVAINVHLGYNQEDSLVMNR 838

Query: 1209 ASLERGMFRSEHIRSYKSDVDEMENVG-KRHRTEDFVKFGKMSSNIGRVDSLDDDGFPFV 1033
            +SLERGMFR+EH+RS+K+DV+  E VG K+ + ++ V FGKM S IGRVDSL+DDGFP++
Sbjct: 839  SSLERGMFRTEHVRSFKADVENSEAVGGKKVKMDEMVSFGKMQSKIGRVDSLEDDGFPYI 898

Query: 1032 GARLQTGDVVIGKFSESGADHSVKLKHTEKGVVQKVVLSSNDEGKNFAVVSLRQVRSPGL 853
            GA LQTGD+VIGK + +G DHS+KLKHTEKG+V KVVLS+NDEGKNFAVVSLRQVRSP L
Sbjct: 899  GANLQTGDIVIGKHAATGVDHSIKLKHTEKGMVHKVVLSANDEGKNFAVVSLRQVRSPCL 958

Query: 852  GDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXX 673
            GDKFSSMHGQKGVLGFLESQENFPF+ QGIVPDIVINPHAFPSRQTPGQ           
Sbjct: 959  GDKFSSMHGQKGVLGFLESQENFPFSQQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA 1018

Query: 672  XXXAQKYATPFSTLSIDAIADQLQRLGFSRWGNERMYNGRTGEMIQTTVFMGPTFYQRLA 493
                 KYATPFS+ S++ I  QL RLGFSRWG ER+Y+GRTGE + + +FMGPTFYQRL 
Sbjct: 1019 LGGGLKYATPFSSPSVEDITAQLHRLGFSRWGGERVYDGRTGEKVNSLIFMGPTFYQRLT 1078

Query: 492  HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANVHERLFTLSD 313
            HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAAN+HERLFTLSD
Sbjct: 1079 HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSD 1138

Query: 312  SSEMYICCKCRNVANVIQRPVL--GGRKIRGPFCRFCESAEDIVKVNVPHGAKLLCQELF 139
            SS+M+IC KC+N+ANVIQRP    GGRKIRGPFCR CES ED+V+VNVP+GAKLLCQELF
Sbjct: 1139 SSQMHICRKCKNMANVIQRPGSGGGGRKIRGPFCRVCESVEDVVRVNVPYGAKLLCQELF 1198

Query: 138  SMGISLKFDTD 106
            SMGISLKFDT+
Sbjct: 1199 SMGISLKFDTE 1209


>ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis]
            gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase
            subunit, putative [Ricinus communis]
          Length = 1203

 Score = 1142 bits (2954), Expect = 0.0
 Identities = 564/785 (71%), Positives = 640/785 (81%), Gaps = 1/785 (0%)
 Frame = -2

Query: 2460 DDFRNKXXXXXXXXXXXXLKVHLKHAERRMVKAIQRDLYGDHDLRGIETYVDASIISNGL 2281
            D FRNK            LKVH+ HA RRM KA+Q+DLYGD D+R IE Y+DASI++NGL
Sbjct: 416  DSFRNKRFELAKELLERELKVHIAHARRRMAKALQKDLYGDRDVRPIEHYLDASIVTNGL 475

Query: 2280 SRAFSTGAWSHPYKKMERVSGVVATLRRTNPLQMTADMRKTRQQVSYTGRVSDARYPHPS 2101
            SRAFSTGAWSHPYK+MER+SGVVA L R NPLQ   D+RKTR  V YTG+V DAR+PHPS
Sbjct: 476  SRAFSTGAWSHPYKRMERISGVVANLGRANPLQTMVDLRKTRYHVQYTGKVGDARFPHPS 535

Query: 2100 HWGKICFLSTPDGENCGLVKNLASLGLVSTTXXXXXXXXXXXXXXXXXXXDTSSLMYEEH 1921
            HWG++CFLSTPDGENCGLVKNLA+ GLVS                     D+ S + E+ 
Sbjct: 536  HWGRVCFLSTPDGENCGLVKNLATTGLVSVNILEPLIDKLIARGMEKVPEDSHSDLDEKD 595

Query: 1920 KIFLDGEWIGTCKDSALFVAEVKSKRWNKEIPQQVEIKRDEKHREIRVFSDAGRVLRPLL 1741
            K+FL+GEW+G C+DS LFVAE++  R  K++PQQVEIKRDE+ +E+R+FSDAGR+LRPLL
Sbjct: 596  KVFLNGEWVGVCEDSRLFVAELRRLRRRKKLPQQVEIKRDEQQQEVRIFSDAGRILRPLL 655

Query: 1740 VVGNLKRIKDLKGEVYSFQSLLDKXXXXXXXXXXXEDCVIAWEISFLYTGSKEKPPLKYT 1561
            VV NL +I+  KG   +FQSLLDK           EDC  AW I FL +G   K  LKYT
Sbjct: 656  VVQNLHKIEAFKGGNCTFQSLLDKGIIEFVGTEEEEDCSTAWGIKFLLSGVDGKQSLKYT 715

Query: 1560 HCELDQSFLLALSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPRIRVDTNIHQLYY 1381
            HCELD SFLL LSCGIIPFANHDHARRVLYQ++KHSQQAIGF TTNP IRVDT  HQLYY
Sbjct: 716  HCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFPTTNPNIRVDTLSHQLYY 775

Query: 1380 PQRPLFRTMLSDSLGKPSYPR-HRGMLPRPEYFNGQCAMVAVNVHLGYNQEDSLVMNRAS 1204
            PQRPLFRT+ SD LGKP   R H G++P+PE +NGQ A+VAVNVHLGYNQEDSLVMNRAS
Sbjct: 776  PQRPLFRTVTSDCLGKPGDTRGHNGIVPKPELYNGQNAIVAVNVHLGYNQEDSLVMNRAS 835

Query: 1203 LERGMFRSEHIRSYKSDVDEMENVGKRHRTEDFVKFGKMSSNIGRVDSLDDDGFPFVGAR 1024
            LERGMFRSEHIRSYK+DVD  E + KR + +D V FGK+ S IGRVDSLDDDGFPF+GA 
Sbjct: 836  LERGMFRSEHIRSYKADVDNKELLDKRRKYDDNVNFGKIPSKIGRVDSLDDDGFPFIGAN 895

Query: 1023 LQTGDVVIGKFSESGADHSVKLKHTEKGVVQKVVLSSNDEGKNFAVVSLRQVRSPGLGDK 844
            LQ+GD+VIG+ +ESG DHS+KLKHTE+G+VQKVVLSSNDEGKNFAVVSLRQVRSP LGDK
Sbjct: 896  LQSGDIVIGRCAESGPDHSIKLKHTERGMVQKVVLSSNDEGKNFAVVSLRQVRSPCLGDK 955

Query: 843  FSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXX 664
            FSSMHGQKGVLGFLESQENFPFT QGIVPDIVINPH+FPSRQTPGQ              
Sbjct: 956  FSSMHGQKGVLGFLESQENFPFTRQGIVPDIVINPHSFPSRQTPGQLLEAALGKGIACGG 1015

Query: 663  AQKYATPFSTLSIDAIADQLQRLGFSRWGNERMYNGRTGEMIQTTVFMGPTFYQRLAHMA 484
            + KYATPFSTLS++AI +QL R GFSRWGNER+YNGRTGEM+++ +FMGPTFYQRL HMA
Sbjct: 1016 SMKYATPFSTLSVEAITNQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLIHMA 1075

Query: 483  EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANVHERLFTLSDSSE 304
            EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA+AN+HERLFTLSDSS+
Sbjct: 1076 EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQ 1135

Query: 303  MYICCKCRNVANVIQRPVLGGRKIRGPFCRFCESAEDIVKVNVPHGAKLLCQELFSMGIS 124
            M+IC KC+NVANVIQR V GGRKIRGP+CR CES ++IVKVNVP+GAKLLCQELFSMGIS
Sbjct: 1136 MHICQKCKNVANVIQRAVPGGRKIRGPYCRVCESVDEIVKVNVPYGAKLLCQELFSMGIS 1195

Query: 123  LKFDT 109
            LKF+T
Sbjct: 1196 LKFET 1200


>ref|XP_010275247.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Nelumbo nucifera]
          Length = 1201

 Score = 1139 bits (2946), Expect = 0.0
 Identities = 561/789 (71%), Positives = 645/789 (81%), Gaps = 4/789 (0%)
 Frame = -2

Query: 2460 DDFRNKXXXXXXXXXXXXLKVHLKHAERRMVKAIQRDLYGDHDLRGIETYVDASIISNGL 2281
            DDFRNK            L+VH++HA+RRM KA+Q+DLYGD  L  IE Y+DASII+NGL
Sbjct: 412  DDFRNKRLELAGDLLERELRVHIRHAQRRMTKAMQKDLYGDRALHPIEHYLDASIITNGL 471

Query: 2280 SRAFSTGAWSHPYKKMERVSGVVATLRRTNPLQMTADMRKTRQQVSYTGRVSDARYPHPS 2101
            +RAFSTGAWSHP+   ER+SGVVATLRRTNPLQMTADMRKTRQQV YTG+V DAR+P+PS
Sbjct: 472  TRAFSTGAWSHPFNTGERLSGVVATLRRTNPLQMTADMRKTRQQVQYTGKVGDARFPNPS 531

Query: 2100 HWGKICFLSTPDGENCGLVKNLASLGLVSTTXXXXXXXXXXXXXXXXXXXDTSSLMYE-E 1924
            HWGK+CFLSTPDGENCGLVKNLA  GLVST                      S      +
Sbjct: 532  HWGKLCFLSTPDGENCGLVKNLAITGLVSTNSVEPLLDILLNCGMEKLVDCNSPASVSGK 591

Query: 1923 HKIFLDGEWIGTCKDSALFVAEVKSKRWNKEIPQQVEIKRDEKHREIRVFSDAGRVLRPL 1744
             K+FL+GEWIG C DSA FV ++++KR +KEIP QVEIKRD++  E+R+FSDAGR+LRPL
Sbjct: 592  DKVFLNGEWIGVCIDSAKFVRDLRNKRRSKEIPHQVEIKRDQQQGEVRIFSDAGRILRPL 651

Query: 1743 LVVGNLKRIKDLKGEVYSFQSLLDKXXXXXXXXXXXEDCVIAWEISFLYTGSKEKPPLKY 1564
            LVV NL++IK+ KG  YSFQSLLDK           EDC  AW + +L    K++PP+ Y
Sbjct: 652  LVVENLRKIKEFKGG-YSFQSLLDKGVLELVGVEEEEDCQTAWGVKYLLMRGKDEPPVNY 710

Query: 1563 THCELDQSFLLALSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPRIRVDTNIHQLY 1384
            THCELD S+L+ LSC +IPFANHDHARRVLYQSEKHSQQAIGFSTTNP IRVDT  HQLY
Sbjct: 711  THCELDLSYLMGLSCSLIPFANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQLY 770

Query: 1383 YPQRPLFRTMLSDSLGKPSYPR-HRGMLPRPEYFNGQCAMVAVNVHLGYNQEDSLVMNRA 1207
            YPQRPLFRTM+SD LG+P YP+ H G+LPRPEYFNGQ A+VAVNVHLGYNQEDSLVMNRA
Sbjct: 771  YPQRPLFRTMVSDCLGRPEYPQGHNGVLPRPEYFNGQNAIVAVNVHLGYNQEDSLVMNRA 830

Query: 1206 SLERGMFRSEHIRSYKSDVDEME--NVGKRHRTEDFVKFGKMSSNIGRVDSLDDDGFPFV 1033
            SLERGMFR+EHIRSYK+DVD  E  +  KR R +D V FGK+ S  GRVDSLDDDGFPF+
Sbjct: 831  SLERGMFRTEHIRSYKADVDNSELFDNNKRQRPKDRVDFGKIQSKFGRVDSLDDDGFPFI 890

Query: 1032 GARLQTGDVVIGKFSESGADHSVKLKHTEKGVVQKVVLSSNDEGKNFAVVSLRQVRSPGL 853
            GA LQ GD+VIG+ +ESGADHS+KLKHTE+G VQKVVLS+ND+GKNFAVVSLRQVRSP L
Sbjct: 891  GANLQAGDIVIGRSAESGADHSIKLKHTERGKVQKVVLSANDDGKNFAVVSLRQVRSPSL 950

Query: 852  GDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXX 673
            GDKFSSMHGQKGVLGFLESQENFPFT QGIVPDIVINPHAFP+RQTPGQ           
Sbjct: 951  GDKFSSMHGQKGVLGFLESQENFPFTLQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIA 1010

Query: 672  XXXAQKYATPFSTLSIDAIADQLQRLGFSRWGNERMYNGRTGEMIQTTVFMGPTFYQRLA 493
               + +YATP++  SID I DQL R G+SRWG+ER+YNGRTGEM+++ +FMGPTFYQRL 
Sbjct: 1011 CGGSMRYATPYTAASIDVITDQLHRAGYSRWGSERIYNGRTGEMMRSLIFMGPTFYQRLI 1070

Query: 492  HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANVHERLFTLSD 313
            HMAEDKVKFRNTGPVHPLTRQPV+DRKRFGG+KFGEMERDCL+AHGAAAN+HERLF LSD
Sbjct: 1071 HMAEDKVKFRNTGPVHPLTRQPVSDRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSD 1130

Query: 312  SSEMYICCKCRNVANVIQRPVLGGRKIRGPFCRFCESAEDIVKVNVPHGAKLLCQELFSM 133
             S+M+IC KC N+ANVIQRPV GG+KIRGP+CRFCESAE+IV+VNVP+GAKLLCQELFSM
Sbjct: 1131 FSQMHICRKCTNLANVIQRPVPGGKKIRGPYCRFCESAENIVRVNVPYGAKLLCQELFSM 1190

Query: 132  GISLKFDTD 106
            GIS+KF+T+
Sbjct: 1191 GISVKFETE 1199