BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00004943
         (1973 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP07298.1| unnamed protein product [Coffea canephora]           1082   0.0  
ref|XP_009784787.1| PREDICTED: pentatricopeptide repeat-containi...   906   0.0  
ref|XP_009606850.1| PREDICTED: pentatricopeptide repeat-containi...   904   0.0  
ref|XP_009606848.1| PREDICTED: pentatricopeptide repeat-containi...   904   0.0  
ref|XP_006346695.1| PREDICTED: pentatricopeptide repeat-containi...   882   0.0  
ref|XP_004244963.1| PREDICTED: pentatricopeptide repeat-containi...   879   0.0  
ref|XP_010266137.1| PREDICTED: pentatricopeptide repeat-containi...   876   0.0  
ref|XP_011101111.1| PREDICTED: pentatricopeptide repeat-containi...   874   0.0  
ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containi...   858   0.0  
ref|XP_012829544.1| PREDICTED: pentatricopeptide repeat-containi...   851   0.0  
ref|XP_011459077.1| PREDICTED: pentatricopeptide repeat-containi...   830   0.0  
ref|XP_010094587.1| hypothetical protein L484_024883 [Morus nota...   825   0.0  
ref|XP_010266140.1| PREDICTED: pentatricopeptide repeat-containi...   817   0.0  
ref|XP_008377072.1| PREDICTED: pentatricopeptide repeat-containi...   816   0.0  
ref|XP_007225185.1| hypothetical protein PRUPE_ppa002191mg [Prun...   815   0.0  
ref|XP_008221147.1| PREDICTED: pentatricopeptide repeat-containi...   814   0.0  
gb|KHG22213.1| hypothetical protein F383_28108 [Gossypium arboreum]   813   0.0  
ref|XP_012464747.1| PREDICTED: pentatricopeptide repeat-containi...   811   0.0  
ref|XP_012464758.1| PREDICTED: pentatricopeptide repeat-containi...   811   0.0  
ref|XP_007018011.1| Pentatricopeptide repeat (PPR-like) superfam...   811   0.0  

>emb|CDP07298.1| unnamed protein product [Coffea canephora]
          Length = 735

 Score = 1082 bits (2799), Expect = 0.0
 Identities = 557/633 (87%), Positives = 568/633 (89%), Gaps = 1/633 (0%)
 Frame = -3

Query: 1896 EQERAVGRKMNIGIAXXXXXXXXXXXPIHITSPPSLRHHHQFFPTAISLVTCTTTTASLS 1717
            EQER VGRKMNIG+A           PIHIT PP LRHHHQFFPTAISL++C T T SLS
Sbjct: 29   EQERPVGRKMNIGVALQPAPLQFRFPPIHITPPPILRHHHQFFPTAISLISCVTAT-SLS 87

Query: 1716 SHQLSLXXXXXXXXXXD-VASLSNRRYDFSLLLQFLSTHTPDHSSNSADSPTQLHPAELR 1540
            SHQLSL          D VASL+NRRYDFS LLQFLST+TPDHS++SADSPTQLHPAELR
Sbjct: 88   SHQLSLDNRQEEDDDQDDVASLNNRRYDFSPLLQFLSTYTPDHSNSSADSPTQLHPAELR 147

Query: 1539 LAESYRAVPAPLWHXXXXXXXXXXXXXSTAYALVTWLQKHNLCFSYELLYSILIHALGRS 1360
            LAESYRAVPAPLWH             STAYALVTWLQKHNLCFSYELLYSILIHALGRS
Sbjct: 148  LAESYRAVPAPLWHSLLKSLSSTPSSISTAYALVTWLQKHNLCFSYELLYSILIHALGRS 207

Query: 1359 DKLYEAFLFSQRQRLTPLTYNALIGACARNDDLEKALNLMARMRRDGYQSDIVNYSLIIQ 1180
            DKLYEAFL SQRQRLTPLTYNALIGACARNDDLEKALNLMARMRRDGYQSD VNYSLIIQ
Sbjct: 208  DKLYEAFLLSQRQRLTPLTYNALIGACARNDDLEKALNLMARMRRDGYQSDFVNYSLIIQ 267

Query: 1179 SLLRNNSIDSTVLEKLYDEIEADRIELDGQLLNDITVGFSKAGDVSRALYFLSVIQGNGL 1000
            SLLRNNSIDSTVLEKLYDEIEADRIELDGQLLND+TVGFSKAGDVSRALYFLSVIQGNGL
Sbjct: 268  SLLRNNSIDSTVLEKLYDEIEADRIELDGQLLNDVTVGFSKAGDVSRALYFLSVIQGNGL 327

Query: 999  SPKTATLVVVISQLGNSGRTXXXXXXXXXXXEGGLKPRTRAYNALLKGYVKTGALRDAED 820
            SPKTATLV VISQLGNSGRT           EGGLKPRTRAYNALLKGYVKTGALRDAED
Sbjct: 328  SPKTATLVAVISQLGNSGRTEEAEAVFEELKEGGLKPRTRAYNALLKGYVKTGALRDAED 387

Query: 819  VVSEMERGGVAPDEHTYGLLIDAYGNAGRWESARIVLKEMEANNVQPNSHVFSRILASYR 640
            VVSEMER GVAPDEHTYGLLIDAYGNAGRWESARIVLKEMEANNVQPNSHVFSRILASYR
Sbjct: 388  VVSEMERSGVAPDEHTYGLLIDAYGNAGRWESARIVLKEMEANNVQPNSHVFSRILASYR 447

Query: 639  DRGEWQRSFQVLKEMKNNGVTPGRKFYNVMIDTFGKYNCLHHAMDTFERMKLEGIEPDTV 460
            DRGEWQRSFQVLKEMKNNGVTP R+FYNVMIDTFGKYNCLHHAMDTFERMKLEGIEPDTV
Sbjct: 448  DRGEWQRSFQVLKEMKNNGVTPDRQFYNVMIDTFGKYNCLHHAMDTFERMKLEGIEPDTV 507

Query: 459  TWNTLIDSHCKHGHHNKAEELFVAMQTSGCLPCTTTYNIMINSFGEQERWEDVKDLLGKM 280
            TWNTLID HCKHGHHNK+EELF AMQ SGCLPCTTTYNIMINSFGEQERWEDVKDLLGKM
Sbjct: 508  TWNTLIDCHCKHGHHNKSEELFEAMQKSGCLPCTTTYNIMINSFGEQERWEDVKDLLGKM 567

Query: 279  QSQGLLHNVVTYTTLVDIYGQSGRFTDAIECFEVMKSVGLKPSSTMYNALINAYAQRGLS 100
            QSQGLL  VVTYTTLVDIYG+SGRFTDAIEC EVMKSVGLKPSSTMYNALINAYAQRGLS
Sbjct: 568  QSQGLLPTVVTYTTLVDIYGRSGRFTDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLS 627

Query: 99   EQAVNAFRVMRGEGLKPSLLALNSLINAFSEDR 1
            EQAVNAFRVMRGE LKPSLLALNSLINAFSEDR
Sbjct: 628  EQAVNAFRVMRGERLKPSLLALNSLINAFSEDR 660


>ref|XP_009784787.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial [Nicotiana sylvestris]
            gi|698474688|ref|XP_009784788.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial [Nicotiana sylvestris]
          Length = 710

 Score =  906 bits (2341), Expect = 0.0
 Identities = 452/550 (82%), Positives = 486/550 (88%)
 Frame = -3

Query: 1650 NRRYDFSLLLQFLSTHTPDHSSNSADSPTQLHPAELRLAESYRAVPAPLWHXXXXXXXXX 1471
            NRRYDF+ LLQFLST+TP   ++   SPTQL PAEL+LAESYRAVPAP+WH         
Sbjct: 87   NRRYDFTPLLQFLSTYTPTEPNSDTSSPTQLDPAELKLAESYRAVPAPVWHSLLKNLAST 146

Query: 1470 XXXXSTAYALVTWLQKHNLCFSYELLYSILIHALGRSDKLYEAFLFSQRQRLTPLTYNAL 1291
                STAYALVTWLQKHN+CFSYELLYSILIHALGRS+KLYEAFL SQRQ LTPLTYNAL
Sbjct: 147  SSSISTAYALVTWLQKHNVCFSYELLYSILIHALGRSEKLYEAFLLSQRQTLTPLTYNAL 206

Query: 1290 IGACARNDDLEKALNLMARMRRDGYQSDIVNYSLIIQSLLRNNSIDSTVLEKLYDEIEAD 1111
            IGACARN DLEKALNLM RMRRDGYQSD VNYSLIIQSL+R+NSID T+LEK YDEIEAD
Sbjct: 207  IGACARNGDLEKALNLMCRMRRDGYQSDYVNYSLIIQSLIRSNSIDLTMLEKFYDEIEAD 266

Query: 1110 RIELDGQLLNDITVGFSKAGDVSRALYFLSVIQGNGLSPKTATLVVVISQLGNSGRTXXX 931
             IELDGQLLND+ VGF+KAGDV RAL F+SV+QGNGLSPKTAT+V +IS+LGNSGRT   
Sbjct: 267  MIELDGQLLNDMIVGFAKAGDVDRALVFMSVVQGNGLSPKTATVVTLISELGNSGRTEEA 326

Query: 930  XXXXXXXXEGGLKPRTRAYNALLKGYVKTGALRDAEDVVSEMERGGVAPDEHTYGLLIDA 751
                    EGGLKPRTRAYNALLKGYVKTG+L+DAE +VSEMER GVAPDEHTY LLIDA
Sbjct: 327  EAVFEELKEGGLKPRTRAYNALLKGYVKTGSLKDAEYIVSEMERNGVAPDEHTYSLLIDA 386

Query: 750  YGNAGRWESARIVLKEMEANNVQPNSHVFSRILASYRDRGEWQRSFQVLKEMKNNGVTPG 571
            YGNAGRWESARIVLKEMEANNV+PNS VFSRILASYRDRGEWQRSFQVLKEMKN+GV P 
Sbjct: 387  YGNAGRWESARIVLKEMEANNVRPNSFVFSRILASYRDRGEWQRSFQVLKEMKNSGVNPD 446

Query: 570  RKFYNVMIDTFGKYNCLHHAMDTFERMKLEGIEPDTVTWNTLIDSHCKHGHHNKAEELFV 391
            R+FYN+MIDTFGKYNCL HAM TFERMKL+GIEPDTVTWNTLID H KHGHHNK+EELF 
Sbjct: 447  RQFYNIMIDTFGKYNCLDHAMSTFERMKLDGIEPDTVTWNTLIDCHSKHGHHNKSEELFE 506

Query: 390  AMQTSGCLPCTTTYNIMINSFGEQERWEDVKDLLGKMQSQGLLHNVVTYTTLVDIYGQSG 211
            AMQ SGCLPCTTTYNIMINSFGE E+WE+VK LL KMQSQGLL NVVTYTTL++IYGQSG
Sbjct: 507  AMQESGCLPCTTTYNIMINSFGELEKWEEVKGLLSKMQSQGLLPNVVTYTTLINIYGQSG 566

Query: 210  RFTDAIECFEVMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMRGEGLKPSLLALN 31
            RF DAIEC EVMKS GLKPSSTMYNALINAYAQRGLSEQAVNAFR+M+G+GLKPSLLALN
Sbjct: 567  RFNDAIECLEVMKSTGLKPSSTMYNALINAYAQRGLSEQAVNAFRIMKGDGLKPSLLALN 626

Query: 30   SLINAFSEDR 1
            SLINAF EDR
Sbjct: 627  SLINAFGEDR 636


>ref|XP_009606850.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial isoform X2 [Nicotiana tomentosiformis]
          Length = 698

 Score =  904 bits (2337), Expect = 0.0
 Identities = 453/555 (81%), Positives = 487/555 (87%)
 Frame = -3

Query: 1665 VASLSNRRYDFSLLLQFLSTHTPDHSSNSADSPTQLHPAELRLAESYRAVPAPLWHXXXX 1486
            V S  NRRYDF+ L+QFLST+TP   ++   SPTQL PAEL+LAESYRAVPAP+WH    
Sbjct: 82   VVSYPNRRYDFTPLIQFLSTYTPTEPNSDTTSPTQLDPAELKLAESYRAVPAPVWHSLLK 141

Query: 1485 XXXXXXXXXSTAYALVTWLQKHNLCFSYELLYSILIHALGRSDKLYEAFLFSQRQRLTPL 1306
                     STAYALVTWLQKHN+CFSYELLYSILIHALGRS+KLYEAFL SQRQ LTPL
Sbjct: 142  NLASTSSSISTAYALVTWLQKHNVCFSYELLYSILIHALGRSEKLYEAFLLSQRQTLTPL 201

Query: 1305 TYNALIGACARNDDLEKALNLMARMRRDGYQSDIVNYSLIIQSLLRNNSIDSTVLEKLYD 1126
            TYNALIGACARN DLEKALNLM RMRRDGYQSD VNYSLIIQSL+R+NSID T+LEK YD
Sbjct: 202  TYNALIGACARNGDLEKALNLMCRMRRDGYQSDYVNYSLIIQSLIRSNSIDLTMLEKFYD 261

Query: 1125 EIEADRIELDGQLLNDITVGFSKAGDVSRALYFLSVIQGNGLSPKTATLVVVISQLGNSG 946
            EIEAD IELDGQLLND+ VGF+KAGDV RAL F+SV+QGNGLSPKTAT+V +IS+LGNSG
Sbjct: 262  EIEADMIELDGQLLNDMIVGFAKAGDVDRALVFMSVVQGNGLSPKTATVVTLISELGNSG 321

Query: 945  RTXXXXXXXXXXXEGGLKPRTRAYNALLKGYVKTGALRDAEDVVSEMERGGVAPDEHTYG 766
            RT           EGGLKPRTRAYNALLKGYVKTG+L+DAE +VSEMER GVAPDE TY 
Sbjct: 322  RTEEAEAVFEELKEGGLKPRTRAYNALLKGYVKTGSLKDAEYIVSEMERNGVAPDELTYS 381

Query: 765  LLIDAYGNAGRWESARIVLKEMEANNVQPNSHVFSRILASYRDRGEWQRSFQVLKEMKNN 586
            LLIDAYGNAGRWESARIVLKEMEANNVQPNS VFSRILASYRDRGEWQRSFQVLKEMKN+
Sbjct: 382  LLIDAYGNAGRWESARIVLKEMEANNVQPNSFVFSRILASYRDRGEWQRSFQVLKEMKNS 441

Query: 585  GVTPGRKFYNVMIDTFGKYNCLHHAMDTFERMKLEGIEPDTVTWNTLIDSHCKHGHHNKA 406
            GV P R+FYN+MIDTFGKYNCL HAM TFERMKL+GIEPDTVTWNTLID H KHGHHNK+
Sbjct: 442  GVNPDRQFYNIMIDTFGKYNCLDHAMSTFERMKLDGIEPDTVTWNTLIDCHSKHGHHNKS 501

Query: 405  EELFVAMQTSGCLPCTTTYNIMINSFGEQERWEDVKDLLGKMQSQGLLHNVVTYTTLVDI 226
            EELF AMQ SGCLPCTTTYNIMINSFGE E+WE+VK LL KMQSQGLL NVVTYTTL++I
Sbjct: 502  EELFEAMQESGCLPCTTTYNIMINSFGELEKWEEVKGLLSKMQSQGLLPNVVTYTTLINI 561

Query: 225  YGQSGRFTDAIECFEVMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMRGEGLKPS 46
            YGQSGRF DAIEC EVMKS GLKPSSTMYNALINAYAQRGLSEQAVNAFR+M+G+GLKPS
Sbjct: 562  YGQSGRFNDAIECLEVMKSAGLKPSSTMYNALINAYAQRGLSEQAVNAFRIMKGDGLKPS 621

Query: 45   LLALNSLINAFSEDR 1
            LLALNSLINAF EDR
Sbjct: 622  LLALNSLINAFGEDR 636



 Score =  126 bits (317), Expect = 6e-26
 Identities = 90/389 (23%), Positives = 172/389 (44%), Gaps = 5/389 (1%)
 Frame = -3

Query: 1383 LIHALGRSDKLYEAFLFSQRQR---LTPLT--YNALIGACARNDDLEKALNLMARMRRDG 1219
            LI  LG S +  EA    +  +   L P T  YNAL+    +   L+ A  +++ M R+G
Sbjct: 313  LISELGNSGRTEEAEAVFEELKEGGLKPRTRAYNALLKGYVKTGSLKDAEYIVSEMERNG 372

Query: 1218 YQSDIVNYSLIIQSLLRNNSIDSTVLEKLYDEIEADRIELDGQLLNDITVGFSKAGDVSR 1039
               D + YSL+I +       +S  +  +  E+EA+ ++ +  + + I   +   G+  R
Sbjct: 373  VAPDELTYSLLIDAYGNAGRWESARI--VLKEMEANNVQPNSFVFSRILASYRDRGEWQR 430

Query: 1038 ALYFLSVIQGNGLSPKTATLVVVISQLGNSGRTXXXXXXXXXXXEGGLKPRTRAYNALLK 859
            +   L  ++ +G++P      ++I   G                  G++P T  +N L+ 
Sbjct: 431  SFQVLKEMKNSGVNPDRQFYNIMIDTFGKYNCLDHAMSTFERMKLDGIEPDTVTWNTLID 490

Query: 858  GYVKTGALRDAEDVVSEMERGGVAPDEHTYGLLIDAYGNAGRWESARIVLKEMEANNVQP 679
             + K G    +E++   M+  G  P   TY ++I+++G   +WE  + +L +M++  + P
Sbjct: 491  CHSKHGHHNKSEELFEAMQESGCLPCTTTYNIMINSFGELEKWEEVKGLLSKMQSQGLLP 550

Query: 678  NSHVFSRILASYRDRGEWQRSFQVLKEMKNNGVTPGRKFYNVMIDTFGKYNCLHHAMDTF 499
            N   ++ ++  Y   G +  + + L+ MK+ G+ P    YN +I+ + +      A++ F
Sbjct: 551  NVVTYTTLINIYGQSGRFNDAIECLEVMKSAGLKPSSTMYNALINAYAQRGLSEQAVNAF 610

Query: 498  ERMKLEGIEPDTVTWNTLIDSHCKHGHHNKAEELFVAMQTSGCLPCTTTYNIMINSFGEQ 319
              MK +G++P  +  N+L                                   IN+FGE 
Sbjct: 611  RIMKGDGLKPSLLALNSL-----------------------------------INAFGED 635

Query: 318  ERWEDVKDLLGKMQSQGLLHNVVTYTTLV 232
             R  +   +L  M+   +  +VVTYTTL+
Sbjct: 636  RRDAEAFAVLKYMKENHMKADVVTYTTLM 664


>ref|XP_009606848.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial isoform X1 [Nicotiana tomentosiformis]
            gi|697106032|ref|XP_009606849.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial isoform X1 [Nicotiana tomentosiformis]
          Length = 710

 Score =  904 bits (2337), Expect = 0.0
 Identities = 453/555 (81%), Positives = 487/555 (87%)
 Frame = -3

Query: 1665 VASLSNRRYDFSLLLQFLSTHTPDHSSNSADSPTQLHPAELRLAESYRAVPAPLWHXXXX 1486
            V S  NRRYDF+ L+QFLST+TP   ++   SPTQL PAEL+LAESYRAVPAP+WH    
Sbjct: 82   VVSYPNRRYDFTPLIQFLSTYTPTEPNSDTTSPTQLDPAELKLAESYRAVPAPVWHSLLK 141

Query: 1485 XXXXXXXXXSTAYALVTWLQKHNLCFSYELLYSILIHALGRSDKLYEAFLFSQRQRLTPL 1306
                     STAYALVTWLQKHN+CFSYELLYSILIHALGRS+KLYEAFL SQRQ LTPL
Sbjct: 142  NLASTSSSISTAYALVTWLQKHNVCFSYELLYSILIHALGRSEKLYEAFLLSQRQTLTPL 201

Query: 1305 TYNALIGACARNDDLEKALNLMARMRRDGYQSDIVNYSLIIQSLLRNNSIDSTVLEKLYD 1126
            TYNALIGACARN DLEKALNLM RMRRDGYQSD VNYSLIIQSL+R+NSID T+LEK YD
Sbjct: 202  TYNALIGACARNGDLEKALNLMCRMRRDGYQSDYVNYSLIIQSLIRSNSIDLTMLEKFYD 261

Query: 1125 EIEADRIELDGQLLNDITVGFSKAGDVSRALYFLSVIQGNGLSPKTATLVVVISQLGNSG 946
            EIEAD IELDGQLLND+ VGF+KAGDV RAL F+SV+QGNGLSPKTAT+V +IS+LGNSG
Sbjct: 262  EIEADMIELDGQLLNDMIVGFAKAGDVDRALVFMSVVQGNGLSPKTATVVTLISELGNSG 321

Query: 945  RTXXXXXXXXXXXEGGLKPRTRAYNALLKGYVKTGALRDAEDVVSEMERGGVAPDEHTYG 766
            RT           EGGLKPRTRAYNALLKGYVKTG+L+DAE +VSEMER GVAPDE TY 
Sbjct: 322  RTEEAEAVFEELKEGGLKPRTRAYNALLKGYVKTGSLKDAEYIVSEMERNGVAPDELTYS 381

Query: 765  LLIDAYGNAGRWESARIVLKEMEANNVQPNSHVFSRILASYRDRGEWQRSFQVLKEMKNN 586
            LLIDAYGNAGRWESARIVLKEMEANNVQPNS VFSRILASYRDRGEWQRSFQVLKEMKN+
Sbjct: 382  LLIDAYGNAGRWESARIVLKEMEANNVQPNSFVFSRILASYRDRGEWQRSFQVLKEMKNS 441

Query: 585  GVTPGRKFYNVMIDTFGKYNCLHHAMDTFERMKLEGIEPDTVTWNTLIDSHCKHGHHNKA 406
            GV P R+FYN+MIDTFGKYNCL HAM TFERMKL+GIEPDTVTWNTLID H KHGHHNK+
Sbjct: 442  GVNPDRQFYNIMIDTFGKYNCLDHAMSTFERMKLDGIEPDTVTWNTLIDCHSKHGHHNKS 501

Query: 405  EELFVAMQTSGCLPCTTTYNIMINSFGEQERWEDVKDLLGKMQSQGLLHNVVTYTTLVDI 226
            EELF AMQ SGCLPCTTTYNIMINSFGE E+WE+VK LL KMQSQGLL NVVTYTTL++I
Sbjct: 502  EELFEAMQESGCLPCTTTYNIMINSFGELEKWEEVKGLLSKMQSQGLLPNVVTYTTLINI 561

Query: 225  YGQSGRFTDAIECFEVMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMRGEGLKPS 46
            YGQSGRF DAIEC EVMKS GLKPSSTMYNALINAYAQRGLSEQAVNAFR+M+G+GLKPS
Sbjct: 562  YGQSGRFNDAIECLEVMKSAGLKPSSTMYNALINAYAQRGLSEQAVNAFRIMKGDGLKPS 621

Query: 45   LLALNSLINAFSEDR 1
            LLALNSLINAF EDR
Sbjct: 622  LLALNSLINAFGEDR 636


>ref|XP_006346695.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum tuberosum]
          Length = 697

 Score =  882 bits (2280), Expect = 0.0
 Identities = 450/555 (81%), Positives = 480/555 (86%)
 Frame = -3

Query: 1665 VASLSNRRYDFSLLLQFLSTHTPDHSSNSADSPTQLHPAELRLAESYRAVPAPLWHXXXX 1486
            + S SN+RYDF+ LLQFLST  P+ S NS  SPTQLHP ELRLAESYRAVPAPLWH    
Sbjct: 71   IGSYSNQRYDFTPLLQFLSTTEPN-SDNS--SPTQLHPTELRLAESYRAVPAPLWHSLLK 127

Query: 1485 XXXXXXXXXSTAYALVTWLQKHNLCFSYELLYSILIHALGRSDKLYEAFLFSQRQRLTPL 1306
                     S AYALV WLQKHNLCFSYELLYSILIHALGRS+KLYEAFL SQRQ LTPL
Sbjct: 128  GLSSTPSSISIAYALVIWLQKHNLCFSYELLYSILIHALGRSEKLYEAFLLSQRQTLTPL 187

Query: 1305 TYNALIGACARNDDLEKALNLMARMRRDGYQSDIVNYSLIIQSLLRNNSIDSTVLEKLYD 1126
            TYNALIGACARN DLEKALNLM RMRRDGYQSD VNYSLIIQSL+R+NSID T+L K   
Sbjct: 188  TYNALIGACARNGDLEKALNLMCRMRRDGYQSDYVNYSLIIQSLIRSNSIDLTMLHKFCY 247

Query: 1125 EIEADRIELDGQLLNDITVGFSKAGDVSRALYFLSVIQGNGLSPKTATLVVVISQLGNSG 946
            EIEAD IELDGQLLND+ VGF+KAGDV RAL F+S++QGNGLSPKTAT+V +IS+LGNSG
Sbjct: 248  EIEADMIELDGQLLNDMIVGFAKAGDVDRALGFMSIVQGNGLSPKTATVVNLISELGNSG 307

Query: 945  RTXXXXXXXXXXXEGGLKPRTRAYNALLKGYVKTGALRDAEDVVSEMERGGVAPDEHTYG 766
            RT           EGGLKPRTRA+NALLKGYVKTG+L+DAE +VSEME  GVAPDEHTY 
Sbjct: 308  RTEEAEAIFEELKEGGLKPRTRAFNALLKGYVKTGSLKDAEYIVSEMESSGVAPDEHTYS 367

Query: 765  LLIDAYGNAGRWESARIVLKEMEANNVQPNSHVFSRILASYRDRGEWQRSFQVLKEMKNN 586
            LLIDAYGNAGRWESARIVLKEMEANNVQPNS VFSRILASYRDRGEWQRSFQVLKEMKN+
Sbjct: 368  LLIDAYGNAGRWESARIVLKEMEANNVQPNSFVFSRILASYRDRGEWQRSFQVLKEMKNS 427

Query: 585  GVTPGRKFYNVMIDTFGKYNCLHHAMDTFERMKLEGIEPDTVTWNTLIDSHCKHGHHNKA 406
            GV P R+FYN+MIDTFGKYNCL HAM TFERMKLE IEPDTVTWNTLID H KHGHHNKA
Sbjct: 428  GVNPDRQFYNIMIDTFGKYNCLDHAMSTFERMKLEEIEPDTVTWNTLIDCHSKHGHHNKA 487

Query: 405  EELFVAMQTSGCLPCTTTYNIMINSFGEQERWEDVKDLLGKMQSQGLLHNVVTYTTLVDI 226
            EELF  MQ SGC PCTTTYNIMINSFGE E+WE+VK LL KMQSQGLL NVVTYTTL++I
Sbjct: 488  EELFETMQESGCSPCTTTYNIMINSFGELEKWEEVKCLLSKMQSQGLLPNVVTYTTLINI 547

Query: 225  YGQSGRFTDAIECFEVMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMRGEGLKPS 46
            YGQSGRF DAIEC EVMKS GLKPSSTMYNALINAYAQRGLSEQAVNAFR+M+G+GLKPS
Sbjct: 548  YGQSGRFNDAIECLEVMKSAGLKPSSTMYNALINAYAQRGLSEQAVNAFRIMKGDGLKPS 607

Query: 45   LLALNSLINAFSEDR 1
            LLALNSLINAF EDR
Sbjct: 608  LLALNSLINAFGEDR 622



 Score =  143 bits (361), Expect = 5e-31
 Identities = 102/455 (22%), Positives = 201/455 (44%), Gaps = 42/455 (9%)
 Frame = -3

Query: 1392 YSILIHALGRSDKLYEAFLF-------SQRQRLTPLTYNALIGACARNDDLEKALNLMAR 1234
            YS++I +L RS+ +    L        +    L     N +I   A+  D+++AL  M+ 
Sbjct: 224  YSLIIQSLIRSNSIDLTMLHKFCYEIEADMIELDGQLLNDMIVGFAKAGDVDRALGFMSI 283

Query: 1233 MRRDGYQSDIVNYSLIIQSLLRNNSIDSTVLEKLYDEIEADRIELDGQLLNDITVGFSKA 1054
            ++ +G          +I  L   NS  +   E +++E++   ++   +  N +  G+ K 
Sbjct: 284  VQGNGLSPKTATVVNLISEL--GNSGRTEEAEAIFEELKEGGLKPRTRAFNALLKGYVKT 341

Query: 1053 GDVSRALYFLSVIQGNGLSPKTATLVVVISQLGNSGRTXXXXXXXXXXXEGGLKPRTRAY 874
            G +  A Y +S ++ +G++P   T  ++I   GN+GR               ++P +  +
Sbjct: 342  GSLKDAEYIVSEMESSGVAPDEHTYSLLIDAYGNAGRWESARIVLKEMEANNVQPNSFVF 401

Query: 873  NALLKGYVKTGALRDAEDVVSEMERGGVAPDEHTYGLLIDAYGNAGRWESARIVLKEMEA 694
            + +L  Y   G  + +  V+ EM+  GV PD   Y ++ID +G     + A    + M+ 
Sbjct: 402  SRILASYRDRGEWQRSFQVLKEMKNSGVNPDRQFYNIMIDTFGKYNCLDHAMSTFERMKL 461

Query: 693  NNVQPNSHVFSRILASYRDRGEWQRSFQVLKEMKNNGVTPGRKFYNVMIDTFGKYNCLHH 514
              ++P++  ++ ++  +   G   ++ ++ + M+ +G +P    YN+MI++FG+      
Sbjct: 462  EEIEPDTVTWNTLIDCHSKHGHHNKAEELFETMQESGCSPCTTTYNIMINSFGELEKWEE 521

Query: 513  AMDTFERMKLEGIEPDTVTWNTLIDSHCKHGHHNKAEELFVAMQTSGCLPCTTTYNIMIN 334
                  +M+ +G+ P+ VT+ TLI+ + + G  N A E    M+++G  P +T YN +IN
Sbjct: 522  VKCLLSKMQSQGLLPNVVTYTTLINIYGQSGRFNDAIECLEVMKSAGLKPSSTMYNALIN 581

Query: 333  S-----------------------------------FGEQERWEDVKDLLGKMQSQGLLH 259
            +                                   FGE  R  +   +L  ++   +  
Sbjct: 582  AYAQRGLSEQAVNAFRIMKGDGLKPSLLALNSLINAFGEDRRDAEAFAVLKYLKENDMKP 641

Query: 258  NVVTYTTLVDIYGQSGRFTDAIECFEVMKSVGLKP 154
            +VVTYTTL+    +  +F      +E M   G  P
Sbjct: 642  DVVTYTTLMKTLIRVEKFERVPAVYEEMLLCGCIP 676



 Score = 79.3 bits (194), Expect = 1e-11
 Identities = 59/246 (23%), Positives = 107/246 (43%)
 Frame = -3

Query: 1302 YNALIGACARNDDLEKALNLMARMRRDGYQSDIVNYSLIIQSLLRNNSIDSTVLEKLYDE 1123
            YN +I    + + L+ A++   RM+ +  + D V ++ +I    ++   +    E+L++ 
Sbjct: 436  YNIMIDTFGKYNCLDHAMSTFERMKLEEIEPDTVTWNTLIDCHSKHGHHNKA--EELFET 493

Query: 1122 IEADRIELDGQLLNDITVGFSKAGDVSRALYFLSVIQGNGLSPKTATLVVVISQLGNSGR 943
            ++           N +   F +          LS +Q  GL P   T   +I+  G SGR
Sbjct: 494  MQESGCSPCTTTYNIMINSFGELEKWEEVKCLLSKMQSQGLLPNVVTYTTLINIYGQSGR 553

Query: 942  TXXXXXXXXXXXEGGLKPRTRAYNALLKGYVKTGALRDAEDVVSEMERGGVAPDEHTYGL 763
                          GLKP +  YNAL+  Y + G    A +    M+  G+ P       
Sbjct: 554  FNDAIECLEVMKSAGLKPSSTMYNALINAYAQRGLSEQAVNAFRIMKGDGLKPSLLALNS 613

Query: 762  LIDAYGNAGRWESARIVLKEMEANNVQPNSHVFSRILASYRDRGEWQRSFQVLKEMKNNG 583
            LI+A+G   R   A  VLK ++ N+++P+   ++ ++ +     +++R   V +EM   G
Sbjct: 614  LINAFGEDRRDAEAFAVLKYLKENDMKPDVVTYTTLMKTLIRVEKFERVPAVYEEMLLCG 673

Query: 582  VTPGRK 565
              P RK
Sbjct: 674  CIPDRK 679


>ref|XP_004244963.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial [Solanum lycopersicum]
          Length = 699

 Score =  879 bits (2270), Expect = 0.0
 Identities = 458/601 (76%), Positives = 496/601 (82%), Gaps = 1/601 (0%)
 Frame = -3

Query: 1800 PPSLRHHHQFFPTAISLVTCTTTTASLSSHQLSLXXXXXXXXXXD-VASLSNRRYDFSLL 1624
            PP  +  +QF P    L   ++T+    S+Q ++          D V S SN+RYDF+ L
Sbjct: 27   PPPSQLPYQFHPRRQILGQHSSTSHLSISNQFNISIEEEEEEEDDDVGSYSNQRYDFTRL 86

Query: 1623 LQFLSTHTPDHSSNSADSPTQLHPAELRLAESYRAVPAPLWHXXXXXXXXXXXXXSTAYA 1444
            LQFLST  P+ S NS  SPTQL P ELRLAESYRAVPAPLWH             S AYA
Sbjct: 87   LQFLSTTEPN-SDNS--SPTQLDPTELRLAESYRAVPAPLWHSLLKDLSSTPSSISIAYA 143

Query: 1443 LVTWLQKHNLCFSYELLYSILIHALGRSDKLYEAFLFSQRQRLTPLTYNALIGACARNDD 1264
            LV WLQKHNLC+SYELLYSILIHALGRS+KLYEAFL SQRQ LTPLTYNALIGACARN D
Sbjct: 144  LVIWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQTLTPLTYNALIGACARNGD 203

Query: 1263 LEKALNLMARMRRDGYQSDIVNYSLIIQSLLRNNSIDSTVLEKLYDEIEADRIELDGQLL 1084
            LEKALNLM RMRRDGYQSD VNYSLIIQSL+R+NSID T+L K   EIEAD IELDGQLL
Sbjct: 204  LEKALNLMCRMRRDGYQSDYVNYSLIIQSLIRSNSIDLTMLHKFCYEIEADMIELDGQLL 263

Query: 1083 NDITVGFSKAGDVSRALYFLSVIQGNGLSPKTATLVVVISQLGNSGRTXXXXXXXXXXXE 904
            ND+ VGF+KAGDV  AL F+SV+QGNGLSPK AT+V +IS+LGNSGRT           E
Sbjct: 264  NDMIVGFAKAGDVDTALGFMSVVQGNGLSPKIATVVNLISELGNSGRTDEAEAIFEELKE 323

Query: 903  GGLKPRTRAYNALLKGYVKTGALRDAEDVVSEMERGGVAPDEHTYGLLIDAYGNAGRWES 724
            GGLKPRTRA+N+LLKGYVKTG+L+DAE +VSEMER GVAPDEHTY LLIDAYGNAGRWES
Sbjct: 324  GGLKPRTRAFNSLLKGYVKTGSLKDAEYIVSEMERSGVAPDEHTYSLLIDAYGNAGRWES 383

Query: 723  ARIVLKEMEANNVQPNSHVFSRILASYRDRGEWQRSFQVLKEMKNNGVTPGRKFYNVMID 544
            ARIVLKEMEANNVQPNS VFSRILASYRDRGEWQRSFQVLKEMKN+GV P R+FYN+MID
Sbjct: 384  ARIVLKEMEANNVQPNSFVFSRILASYRDRGEWQRSFQVLKEMKNSGVNPDRQFYNIMID 443

Query: 543  TFGKYNCLHHAMDTFERMKLEGIEPDTVTWNTLIDSHCKHGHHNKAEELFVAMQTSGCLP 364
            TFGKYNCL HAM TFERMKLE IEPDTVTWNTLID H KHGHHNKAEELF  MQ SGC P
Sbjct: 444  TFGKYNCLDHAMSTFERMKLEEIEPDTVTWNTLIDCHSKHGHHNKAEELFEVMQESGCSP 503

Query: 363  CTTTYNIMINSFGEQERWEDVKDLLGKMQSQGLLHNVVTYTTLVDIYGQSGRFTDAIECF 184
            CTTTYNIMINSFGE E+WE+VK LL KMQSQGLL NVVTYTTL++IYGQSGRF DAIEC 
Sbjct: 504  CTTTYNIMINSFGELEKWEEVKGLLSKMQSQGLLPNVVTYTTLINIYGQSGRFNDAIECL 563

Query: 183  EVMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMRGEGLKPSLLALNSLINAFSED 4
            EVMKS GLKPSSTMYNALINAYAQRGLSEQAVNAFR+M+G+GLKPSLLALNSLINAF ED
Sbjct: 564  EVMKSAGLKPSSTMYNALINAYAQRGLSEQAVNAFRIMKGDGLKPSLLALNSLINAFGED 623

Query: 3    R 1
            R
Sbjct: 624  R 624


>ref|XP_010266137.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial isoform X1 [Nelumbo nucifera]
            gi|720032527|ref|XP_010266139.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial isoform X1 [Nelumbo nucifera]
          Length = 691

 Score =  876 bits (2264), Expect = 0.0
 Identities = 446/606 (73%), Positives = 494/606 (81%), Gaps = 7/606 (1%)
 Frame = -3

Query: 1797 PSLRHHHQFFPTAISLVTCTTTTAS-LSSHQLSLXXXXXXXXXXDVASLSNRRYDFSLLL 1621
            P+LRHHH F    I+L T   T+A+ +++   SL             SL NRRYDF  L+
Sbjct: 20   PNLRHHHFFPLPPITLFTTAVTSATTIATTSSSLDNCN---------SLHNRRYDFDPLI 70

Query: 1620 QFLSTHTP------DHSSNSADSPTQLHPAELRLAESYRAVPAPLWHXXXXXXXXXXXXX 1459
            +FLS+ T         S +  DSPT L P ELRLAESYRAVPAPLWH             
Sbjct: 71   RFLSSTTAYSTTSDTDSDSDTDSPTSLDPIELRLAESYRAVPAPLWHSLLKSLCSSPSTL 130

Query: 1458 STAYALVTWLQKHNLCFSYELLYSILIHALGRSDKLYEAFLFSQRQRLTPLTYNALIGAC 1279
             TAYALV+WLQ+HNLCFSYELLYSILIHALGRSDKLYEAFL SQRQ LTPLTYNALIGAC
Sbjct: 131  ETAYALVSWLQRHNLCFSYELLYSILIHALGRSDKLYEAFLLSQRQILTPLTYNALIGAC 190

Query: 1278 ARNDDLEKALNLMARMRRDGYQSDIVNYSLIIQSLLRNNSIDSTVLEKLYDEIEADRIEL 1099
            ARNDDLEKALNLM+RMRRDGYQSD VNYSLIIQSL R N +DS+VL+KLY E+E D+IEL
Sbjct: 191  ARNDDLEKALNLMSRMRRDGYQSDFVNYSLIIQSLTRTNKVDSSVLQKLYGEMETDKIEL 250

Query: 1098 DGQLLNDITVGFSKAGDVSRALYFLSVIQGNGLSPKTATLVVVISQLGNSGRTXXXXXXX 919
            DGQLLND+ V F+KAGD  RA++FL+++QG GLSPKTATLV VI+ LGN GRT       
Sbjct: 251  DGQLLNDLIVAFAKAGDPDRAMFFLAMVQGQGLSPKTATLVAVIAALGNLGRTEEAEAIF 310

Query: 918  XXXXEGGLKPRTRAYNALLKGYVKTGALRDAEDVVSEMERGGVAPDEHTYGLLIDAYGNA 739
                EGGLKPRTRAYNALLKGYVKTG+LRDAE +VSEMERGG++PDEHTY LLIDAY NA
Sbjct: 311  EEMKEGGLKPRTRAYNALLKGYVKTGSLRDAESIVSEMERGGLSPDEHTYSLLIDAYANA 370

Query: 738  GRWESARIVLKEMEANNVQPNSHVFSRILASYRDRGEWQRSFQVLKEMKNNGVTPGRKFY 559
            GRWESARIVLKEMEANNVQPNS+VFSRILASYRDRGEWQ+SF VLKEM+++GV P R FY
Sbjct: 371  GRWESARIVLKEMEANNVQPNSYVFSRILASYRDRGEWQKSFSVLKEMRSSGVRPDRHFY 430

Query: 558  NVMIDTFGKYNCLHHAMDTFERMKLEGIEPDTVTWNTLIDSHCKHGHHNKAEELFVAMQT 379
            NVMIDTFGKYNCL H M TFERM+L+GI+PDTVTWNTLID HCK G H++AEELF AMQ 
Sbjct: 431  NVMIDTFGKYNCLEHTMATFERMQLDGIQPDTVTWNTLIDCHCKSGRHDRAEELFQAMQE 490

Query: 378  SGCLPCTTTYNIMINSFGEQERWEDVKDLLGKMQSQGLLHNVVTYTTLVDIYGQSGRFTD 199
            SGCLPCTTTYNIMINS GEQE+WE+VK LLGKMQSQGLL NVVTYTTL+DIYGQSGRF D
Sbjct: 491  SGCLPCTTTYNIMINSLGEQEKWEEVKSLLGKMQSQGLLPNVVTYTTLIDIYGQSGRFKD 550

Query: 198  AIECFEVMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMRGEGLKPSLLALNSLIN 19
            AIEC E MKS GLKPS TMY+AL+NAYAQRGLSEQAVNAFRVMR +GLKPS+L LNSLIN
Sbjct: 551  AIECLEAMKSAGLKPSPTMYHALVNAYAQRGLSEQAVNAFRVMRADGLKPSVLVLNSLIN 610

Query: 18   AFSEDR 1
            AF EDR
Sbjct: 611  AFGEDR 616


>ref|XP_011101111.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial [Sesamum indicum]
          Length = 689

 Score =  874 bits (2258), Expect = 0.0
 Identities = 453/609 (74%), Positives = 488/609 (80%), Gaps = 4/609 (0%)
 Frame = -3

Query: 1815 IHITSPPS--LRHHHQFFPTAISLVTCTTTTASLSSHQLSLXXXXXXXXXXD-VASLSNR 1645
            +H +SPP   LRH H                +S SS  L+L            VA L N 
Sbjct: 20   LHFSSPPPPFLRHRHHIL-------------SSGSSQHLNLTTINGDEQDPYDVACLPNP 66

Query: 1644 RYDFSLLLQFLST-HTPDHSSNSADSPTQLHPAELRLAESYRAVPAPLWHXXXXXXXXXX 1468
             YDFS LL FLST ++P H S   D PT+L PAELRLAESYRAVPAPLWH          
Sbjct: 67   HYDFSPLLNFLSTNYSPSHLSQP-DPPTRLEPAELRLAESYRAVPAPLWHSLIKNLSSSP 125

Query: 1467 XXXSTAYALVTWLQKHNLCFSYELLYSILIHALGRSDKLYEAFLFSQRQRLTPLTYNALI 1288
               STAY+LVTWLQ+HNLCFSYELLYSILIHALGR++KLYEAFL SQRQ LTPLTYNALI
Sbjct: 126  SSFSTAYSLVTWLQRHNLCFSYELLYSILIHALGRNEKLYEAFLLSQRQSLTPLTYNALI 185

Query: 1287 GACARNDDLEKALNLMARMRRDGYQSDIVNYSLIIQSLLRNNSIDSTVLEKLYDEIEADR 1108
            GACARNDDLEKALNLM RMRRDGYQSD VNYSLIIQSL+RNNS+D  +LEKLY E+EAD 
Sbjct: 186  GACARNDDLEKALNLMERMRRDGYQSDFVNYSLIIQSLMRNNSVDVAILEKLYGEMEADN 245

Query: 1107 IELDGQLLNDITVGFSKAGDVSRALYFLSVIQGNGLSPKTATLVVVISQLGNSGRTXXXX 928
            IELDGQLLNDI  GF+KAGD+ RA+YFL V+QGNGLSPKT+T+V V+++LGN GR     
Sbjct: 246  IELDGQLLNDIIAGFAKAGDIDRAMYFLGVMQGNGLSPKTSTVVAVVNELGNLGRVEEAE 305

Query: 927  XXXXXXXEGGLKPRTRAYNALLKGYVKTGALRDAEDVVSEMERGGVAPDEHTYGLLIDAY 748
                   EGGL+PRTRAYNALLKGYVK GAL+DAE VVSEMER GV PDEHTY LLIDAY
Sbjct: 306  AVFEELKEGGLRPRTRAYNALLKGYVKVGALKDAEYVVSEMERSGVLPDEHTYSLLIDAY 365

Query: 747  GNAGRWESARIVLKEMEANNVQPNSHVFSRILASYRDRGEWQRSFQVLKEMKNNGVTPGR 568
            GNAGRWESARIVLKEMEAN+V+PNS       ASYRDRGEWQRSFQVLKEMKN GV P R
Sbjct: 366  GNAGRWESARIVLKEMEANDVKPNSXXXXXXXASYRDRGEWQRSFQVLKEMKNCGVNPDR 425

Query: 567  KFYNVMIDTFGKYNCLHHAMDTFERMKLEGIEPDTVTWNTLIDSHCKHGHHNKAEELFVA 388
            +FYNVMIDTFGKYNCL H M  FERMK+EGIEPDTVTWNTLID HCK GHHN+AEELF  
Sbjct: 426  QFYNVMIDTFGKYNCLEHMMAAFERMKVEGIEPDTVTWNTLIDCHCKQGHHNEAEELFKE 485

Query: 387  MQTSGCLPCTTTYNIMINSFGEQERWEDVKDLLGKMQSQGLLHNVVTYTTLVDIYGQSGR 208
            MQ SGCLPCTTTYNIMINS G QERW+DVK+LLGKMQSQGLL NVVTYTTLVDIYGQSGR
Sbjct: 486  MQESGCLPCTTTYNIMINSLGGQERWDDVKELLGKMQSQGLLPNVVTYTTLVDIYGQSGR 545

Query: 207  FTDAIECFEVMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMRGEGLKPSLLALNS 28
            F DAI+C EVMKS GLKPSSTMYNALINAYAQRGLSEQAVNAFRVMR +GLKPSLLALNS
Sbjct: 546  FNDAIDCLEVMKSAGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMRSDGLKPSLLALNS 605

Query: 27   LINAFSEDR 1
            LINAF EDR
Sbjct: 606  LINAFGEDR 614


>ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial [Vitis vinifera]
            gi|297745544|emb|CBI40709.3| unnamed protein product
            [Vitis vinifera]
          Length = 695

 Score =  858 bits (2216), Expect = 0.0
 Identities = 435/602 (72%), Positives = 489/602 (81%), Gaps = 3/602 (0%)
 Frame = -3

Query: 1797 PSLRHHHQFFPTAISLVTCTTTTASLSSHQLSLXXXXXXXXXXDVASLSNRRYDFSLLLQ 1618
            P LR H    P  ++  +   TTAS  + Q S           D+ S+ NRRYDF+ LL+
Sbjct: 20   PVLRDHRILQPPLLATTSAAVTTASGEASQFS-KPLNEYGSSGDLNSVPNRRYDFTPLLR 78

Query: 1617 FLSTHTPDHSSNS---ADSPTQLHPAELRLAESYRAVPAPLWHXXXXXXXXXXXXXSTAY 1447
            FLS    D  S +   +  PT L   E +L ESYRAVPAPLWH              TAY
Sbjct: 79   FLSNSESDSDSGAEVESPPPTSLDFTEFQLVESYRAVPAPLWHSLLKSLCSDSSSIGTAY 138

Query: 1446 ALVTWLQKHNLCFSYELLYSILIHALGRSDKLYEAFLFSQRQRLTPLTYNALIGACARND 1267
            +LVTWL++HNLCFSYELLYSILIHALGRS+KLYEAFL SQRQ LTPLTYNALIGACARND
Sbjct: 139  SLVTWLERHNLCFSYELLYSILIHALGRSEKLYEAFLLSQRQTLTPLTYNALIGACARND 198

Query: 1266 DLEKALNLMARMRRDGYQSDIVNYSLIIQSLLRNNSIDSTVLEKLYDEIEADRIELDGQL 1087
            DLEKALNLM+RMRRDG+ SD VNYS IIQSL R N  DS++L+K+Y EIE+D+IELDGQL
Sbjct: 199  DLEKALNLMSRMRRDGFPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQL 258

Query: 1086 LNDITVGFSKAGDVSRALYFLSVIQGNGLSPKTATLVVVISQLGNSGRTXXXXXXXXXXX 907
            LNDI VGF+K+GDV+RA+ FL+++QGNGLSPKTATLV VI+ LGN+GRT           
Sbjct: 259  LNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELK 318

Query: 906  EGGLKPRTRAYNALLKGYVKTGALRDAEDVVSEMERGGVAPDEHTYGLLIDAYGNAGRWE 727
            EGGL PRTRAYNALLKGYVKTG+L+DAE +VSEMER G +PDEHTY LLIDAY NAGRWE
Sbjct: 319  EGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWE 378

Query: 726  SARIVLKEMEANNVQPNSHVFSRILASYRDRGEWQRSFQVLKEMKNNGVTPGRKFYNVMI 547
            SARIVLKEMEA+ V+PNS+VFSRILASYRDRG+WQ+SFQVL+EM+N+GV+P R FYNVMI
Sbjct: 379  SARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMI 438

Query: 546  DTFGKYNCLHHAMDTFERMKLEGIEPDTVTWNTLIDSHCKHGHHNKAEELFVAMQTSGCL 367
            DTFGK NCL HA+ TF+RM++EG++PD VTWNTLID HCK GHHNKAEELF AMQ SGC 
Sbjct: 439  DTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCS 498

Query: 366  PCTTTYNIMINSFGEQERWEDVKDLLGKMQSQGLLHNVVTYTTLVDIYGQSGRFTDAIEC 187
            PCTTTYNIMINSFGEQERWEDVK LLGKMQSQGLL NVVTYTTLVDIYGQSGRF DAIEC
Sbjct: 499  PCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIEC 558

Query: 186  FEVMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMRGEGLKPSLLALNSLINAFSE 7
             EVMKSVGLKPSSTMYNALINAYAQRGLSEQA+NAFRVMR +GLKPS+L LNSLINAF E
Sbjct: 559  LEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGE 618

Query: 6    DR 1
            DR
Sbjct: 619  DR 620


>ref|XP_012829544.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial [Erythranthe guttatus]
            gi|604297234|gb|EYU17498.1| hypothetical protein
            MIMGU_mgv1a002335mg [Erythranthe guttata]
          Length = 687

 Score =  851 bits (2199), Expect = 0.0
 Identities = 436/607 (71%), Positives = 486/607 (80%), Gaps = 2/607 (0%)
 Frame = -3

Query: 1815 IHITSPPSLRHHHQFFPTAISLVTCTTTTASLSSHQLSLXXXXXXXXXXD-VASLSNRRY 1639
            +H + PP    H Q+F              S +S QL++            VASL N  Y
Sbjct: 18   LHFSPPPQFLRHRQYF------------LLSAASQQLNIKTINEDEQDPYDVASLPNPNY 65

Query: 1638 DFSLLLQFLSTHTPDHSSNSA-DSPTQLHPAELRLAESYRAVPAPLWHXXXXXXXXXXXX 1462
            DF+ LL FLST   + S  S  D P++L PAELRLAESY AVPAPLWH            
Sbjct: 66   DFTPLLTFLSTTNYNPSEPSQPDPPSRLDPAELRLAESYGAVPAPLWHSLIKNLSSTPAS 125

Query: 1461 XSTAYALVTWLQKHNLCFSYELLYSILIHALGRSDKLYEAFLFSQRQRLTPLTYNALIGA 1282
             STAY+LVTWLQ+HNLCFSYELLYSILIHALGR+++LYEAFL SQRQ LTPLTYNALIGA
Sbjct: 126  FSTAYSLVTWLQRHNLCFSYELLYSILIHALGRNEQLYEAFLLSQRQSLTPLTYNALIGA 185

Query: 1281 CARNDDLEKALNLMARMRRDGYQSDIVNYSLIIQSLLRNNSIDSTVLEKLYDEIEADRIE 1102
            CARN DLEKALNLM RMRRDGYQSD VNYSL+IQSL+RNN +D  +LEKLY EIEADRIE
Sbjct: 186  CARNGDLEKALNLMERMRRDGYQSDFVNYSLVIQSLMRNNIVDVAILEKLYGEIEADRIE 245

Query: 1101 LDGQLLNDITVGFSKAGDVSRALYFLSVIQGNGLSPKTATLVVVISQLGNSGRTXXXXXX 922
            LDGQL ND+  GF+KAGD+ RALYFL V+QG+GLSPKT+T+V V+++LG  GR       
Sbjct: 246  LDGQLSNDMIAGFAKAGDIDRALYFLGVMQGSGLSPKTSTVVSVVNELGILGRVEEAEAV 305

Query: 921  XXXXXEGGLKPRTRAYNALLKGYVKTGALRDAEDVVSEMERGGVAPDEHTYGLLIDAYGN 742
                 EGGLKPRTRAYNALLKGYVK GAL+DAE VVSEME+ GV PDEHTY LLIDAYGN
Sbjct: 306  FEELKEGGLKPRTRAYNALLKGYVKVGALKDAEYVVSEMEKSGVLPDEHTYSLLIDAYGN 365

Query: 741  AGRWESARIVLKEMEANNVQPNSHVFSRILASYRDRGEWQRSFQVLKEMKNNGVTPGRKF 562
            AGRWESARIVLKEMEAN+V+PNS+VFSRILASYRDRGEWQRSFQVLKEMKN GV P R+F
Sbjct: 366  AGRWESARIVLKEMEANDVKPNSYVFSRILASYRDRGEWQRSFQVLKEMKNCGVVPDRQF 425

Query: 561  YNVMIDTFGKYNCLHHAMDTFERMKLEGIEPDTVTWNTLIDSHCKHGHHNKAEELFVAMQ 382
            YNVM+DTFGKYNCL H + TF RMK EGIEPDTVTWNTLID HCK G   K+EELF  M+
Sbjct: 426  YNVMMDTFGKYNCLDHMISTFRRMKSEGIEPDTVTWNTLIDCHCKQGRFGKSEELFEEMR 485

Query: 381  TSGCLPCTTTYNIMINSFGEQERWEDVKDLLGKMQSQGLLHNVVTYTTLVDIYGQSGRFT 202
             SGC+PCTTTYNIMIN+ G QERWE+V++LLGKMQS+GLL NVVTYTTLVDIYG+SGRF 
Sbjct: 486  ESGCVPCTTTYNIMINALGVQERWEEVRELLGKMQSEGLLPNVVTYTTLVDIYGKSGRFN 545

Query: 201  DAIECFEVMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMRGEGLKPSLLALNSLI 22
            DAIEC E MKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMRG+GLKPS+LA+NSL+
Sbjct: 546  DAIECLEAMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMRGDGLKPSILAMNSLV 605

Query: 21   NAFSEDR 1
            NAF EDR
Sbjct: 606  NAFGEDR 612


>ref|XP_011459077.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial [Fragaria vesca subsp. vesca]
          Length = 698

 Score =  830 bits (2145), Expect = 0.0
 Identities = 422/604 (69%), Positives = 479/604 (79%), Gaps = 2/604 (0%)
 Frame = -3

Query: 1806 TSPPSLRHHHQFFPTAISLVTCTTTTASLSSHQLSLXXXXXXXXXXDVASLSNRRYDFSL 1627
            TSP  +RHHH F     +   C  +T S  SH  SL          D    +  RYDF+ 
Sbjct: 20   TSPILIRHHHIFHAPLSATTPCAVST-SAESHLPSLPPSRRRFDNYDTDQATVSRYDFAP 78

Query: 1626 LLQFLSTHTPDHSSNSADSPTQLHPAELRLAESYRAVPAPLWHXXXXXXXXXXXXXST-- 1453
            LL FLST +  H    + SPT L PAE +LAE YRAVPAPLWH             S   
Sbjct: 79   LLAFLSTSSSAHDVTDSASPTSLDPAEFQLAELYRAVPAPLWHSLLKSLCSSSSSSSLKQ 138

Query: 1452 AYALVTWLQKHNLCFSYELLYSILIHALGRSDKLYEAFLFSQRQRLTPLTYNALIGACAR 1273
            AYALV WLQKHNLCFSYELLYSILIHALGRS+KLYEAFL SQR+ LTPLTYNALIGACAR
Sbjct: 139  AYALVAWLQKHNLCFSYELLYSILIHALGRSEKLYEAFLLSQRRTLTPLTYNALIGACAR 198

Query: 1272 NDDLEKALNLMARMRRDGYQSDIVNYSLIIQSLLRNNSIDSTVLEKLYDEIEADRIELDG 1093
            N DLEKALNLM+RMR+DGY+SD VNYSL+IQSL R+N +DS ++ KLY EIE++ +E+DG
Sbjct: 199  NGDLEKALNLMSRMRQDGYRSDFVNYSLVIQSLNRSNKVDSPIMLKLYKEIESENVEIDG 258

Query: 1092 QLLNDITVGFSKAGDVSRALYFLSVIQGNGLSPKTATLVVVISQLGNSGRTXXXXXXXXX 913
            QLLND+ VGF+KAG+ S+A++FL+++Q +GLSPKTATLV VIS LGN+GR          
Sbjct: 259  QLLNDLIVGFAKAGEPSQAMHFLAMVQASGLSPKTATLVSVISALGNAGRVVEAEAIFEE 318

Query: 912  XXEGGLKPRTRAYNALLKGYVKTGALRDAEDVVSEMERGGVAPDEHTYGLLIDAYGNAGR 733
              EGGL+PRTRAYNALLKGYVK  +L DAE +VS+MER G++PDEHTY LLIDAY NAGR
Sbjct: 319  MKEGGLQPRTRAYNALLKGYVKAASLEDAESIVSQMERSGISPDEHTYSLLIDAYANAGR 378

Query: 732  WESARIVLKEMEANNVQPNSHVFSRILASYRDRGEWQRSFQVLKEMKNNGVTPGRKFYNV 553
            WESARIVLKEMEA+NVQPNS+VFSRILASYRDRGEWQ+SFQVL+EM+++GV P R FYNV
Sbjct: 379  WESARIVLKEMEASNVQPNSYVFSRILASYRDRGEWQKSFQVLREMRSSGVMPDRHFYNV 438

Query: 552  MIDTFGKYNCLHHAMDTFERMKLEGIEPDTVTWNTLIDSHCKHGHHNKAEELFVAMQTSG 373
            MIDTFGK NCL HAM TFERM  EGI+PDTVTWNTLID HCK GHH +AEELF  MQ SG
Sbjct: 439  MIDTFGKSNCLDHAMATFERMLSEGIQPDTVTWNTLIDIHCKSGHHARAEELFEEMQESG 498

Query: 372  CLPCTTTYNIMINSFGEQERWEDVKDLLGKMQSQGLLHNVVTYTTLVDIYGQSGRFTDAI 193
            C PC TT+NIMINS GEQERW++VK L+GKMQSQGLL N+VTYTTLVDIYG+SGRF DAI
Sbjct: 499  CAPCATTFNIMINSLGEQERWDEVKGLMGKMQSQGLLPNIVTYTTLVDIYGKSGRFNDAI 558

Query: 192  ECFEVMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMRGEGLKPSLLALNSLINAF 13
            EC E+MKS GLKPS TMYNALINAYAQRGLSE A+NAFRVMR +GLKPSLLALNSLINAF
Sbjct: 559  ECLEIMKSAGLKPSPTMYNALINAYAQRGLSELALNAFRVMRADGLKPSLLALNSLINAF 618

Query: 12   SEDR 1
             EDR
Sbjct: 619  GEDR 622



 Score =  163 bits (412), Expect = 6e-37
 Identities = 100/431 (23%), Positives = 204/431 (47%), Gaps = 7/431 (1%)
 Frame = -3

Query: 1392 YSILIHALGRSDKLYEAFLF-------SQRQRLTPLTYNALIGACARNDDLEKALNLMAR 1234
            YS++I +L RS+K+    +        S+   +     N LI   A+  +  +A++ +A 
Sbjct: 224  YSLVIQSLNRSNKVDSPIMLKLYKEIESENVEIDGQLLNDLIVGFAKAGEPSQAMHFLAM 283

Query: 1233 MRRDGYQSDIVNYSLIIQSLLRNNSIDSTVLEKLYDEIEADRIELDGQLLNDITVGFSKA 1054
            ++  G          +I +L   N+      E +++E++   ++   +  N +  G+ KA
Sbjct: 284  VQASGLSPKTATLVSVISAL--GNAGRVVEAEAIFEEMKEGGLQPRTRAYNALLKGYVKA 341

Query: 1053 GDVSRALYFLSVIQGNGLSPKTATLVVVISQLGNSGRTXXXXXXXXXXXEGGLKPRTRAY 874
              +  A   +S ++ +G+SP   T  ++I    N+GR               ++P +  +
Sbjct: 342  ASLEDAESIVSQMERSGISPDEHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVF 401

Query: 873  NALLKGYVKTGALRDAEDVVSEMERGGVAPDEHTYGLLIDAYGNAGRWESARIVLKEMEA 694
            + +L  Y   G  + +  V+ EM   GV PD H Y ++ID +G +   + A    + M +
Sbjct: 402  SRILASYRDRGEWQKSFQVLREMRSSGVMPDRHFYNVMIDTFGKSNCLDHAMATFERMLS 461

Query: 693  NNVQPNSHVFSRILASYRDRGEWQRSFQVLKEMKNNGVTPGRKFYNVMIDTFGKYNCLHH 514
              +QP++  ++ ++  +   G   R+ ++ +EM+ +G  P    +N+MI++ G+      
Sbjct: 462  EGIQPDTVTWNTLIDIHCKSGHHARAEELFEEMQESGCAPCATTFNIMINSLGEQERWDE 521

Query: 513  AMDTFERMKLEGIEPDTVTWNTLIDSHCKHGHHNKAEELFVAMQTSGCLPCTTTYNIMIN 334
                  +M+ +G+ P+ VT+ TL+D + K G  N A E    M+++G  P  T YN +IN
Sbjct: 522  VKGLMGKMQSQGLLPNIVTYTTLVDIYGKSGRFNDAIECLEIMKSAGLKPSPTMYNALIN 581

Query: 333  SFGEQERWEDVKDLLGKMQSQGLLHNVVTYTTLVDIYGQSGRFTDAIECFEVMKSVGLKP 154
            ++ ++   E   +    M++ GL  +++   +L++ +G+  R  +A    + MK   +KP
Sbjct: 582  AYAQRGLSELALNAFRVMRADGLKPSLLALNSLINAFGEDRRDAEAFSVLQYMKENDVKP 641

Query: 153  SSTMYNALINA 121
                Y  L+ A
Sbjct: 642  DVVTYTTLMKA 652



 Score =  108 bits (270), Expect = 2e-20
 Identities = 88/380 (23%), Positives = 164/380 (43%), Gaps = 40/380 (10%)
 Frame = -3

Query: 1383 LIHALGRSDKLYEAFLFSQRQR---LTPLT--YNALIGACARNDDLEKALNLMARMRRDG 1219
            +I ALG + ++ EA    +  +   L P T  YNAL+    +   LE A +++++M R G
Sbjct: 299  VISALGNAGRVVEAEAIFEEMKEGGLQPRTRAYNALLKGYVKAASLEDAESIVSQMERSG 358

Query: 1218 YQSDIVNYSLIIQSLLRNNSIDSTVLEKLYDEIEADRIELDGQLLNDITVGFSKAGDVSR 1039
               D   YSL+I +       +S  +  +  E+EA  ++ +  + + I   +   G+  +
Sbjct: 359  ISPDEHTYSLLIDAYANAGRWESARI--VLKEMEASNVQPNSYVFSRILASYRDRGEWQK 416

Query: 1038 ALYFLSVIQGNGLSPKTATLVVVISQLGNSGRTXXXXXXXXXXXEGGLKPRTRAYNALLK 859
            +   L  ++ +G+ P      V+I   G S                G++P T  +N L+ 
Sbjct: 417  SFQVLREMRSSGVMPDRHFYNVMIDTFGKSNCLDHAMATFERMLSEGIQPDTVTWNTLID 476

Query: 858  GYVKTGALRDAEDVVSEMERGGVAP------------------DEH-------------- 775
             + K+G    AE++  EM+  G AP                  DE               
Sbjct: 477  IHCKSGHHARAEELFEEMQESGCAPCATTFNIMINSLGEQERWDEVKGLMGKMQSQGLLP 536

Query: 774  ---TYGLLIDAYGNAGRWESARIVLKEMEANNVQPNSHVFSRILASYRDRGEWQRSFQVL 604
               TY  L+D YG +GR+  A   L+ M++  ++P+  +++ ++ +Y  RG  + +    
Sbjct: 537  NIVTYTTLVDIYGKSGRFNDAIECLEIMKSAGLKPSPTMYNALINAYAQRGLSELALNAF 596

Query: 603  KEMKNNGVTPGRKFYNVMIDTFGKYNCLHHAMDTFERMKLEGIEPDTVTWNTLIDSHCKH 424
            + M+ +G+ P     N +I+ FG+      A    + MK   ++PD VT+ TL+ +  + 
Sbjct: 597  RVMRADGLKPSLLALNSLINAFGEDRRDAEAFSVLQYMKENDVKPDVVTYTTLMKALIRV 656

Query: 423  GHHNKAEELFVAMQTSGCLP 364
                K  +++  M  S   P
Sbjct: 657  DKFYKVPDVYEEMIHSRVTP 676



 Score = 93.2 bits (230), Expect = 8e-16
 Identities = 70/317 (22%), Positives = 136/317 (42%), Gaps = 5/317 (1%)
 Frame = -3

Query: 1401 ELLYSILIHALGRSDKLYEAFLFSQRQRLTPLTYNA-----LIGACARNDDLEKALNLMA 1237
            E  YS+LI A   + +   A +  +    + +  N+     ++ +     + +K+  ++ 
Sbjct: 363  EHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSRILASYRDRGEWQKSFQVLR 422

Query: 1236 RMRRDGYQSDIVNYSLIIQSLLRNNSIDSTVLEKLYDEIEADRIELDGQLLNDITVGFSK 1057
             MR  G   D   Y+++I +  ++N +D  +    ++ + ++ I+ D    N +     K
Sbjct: 423  EMRSSGVMPDRHFYNVMIDTFGKSNCLDHAMAT--FERMLSEGIQPDTVTWNTLIDIHCK 480

Query: 1056 AGDVSRALYFLSVIQGNGLSPKTATLVVVISQLGNSGRTXXXXXXXXXXXEGGLKPRTRA 877
            +G  +RA      +Q +G +P   T  ++I+ LG   R              GL P    
Sbjct: 481  SGHHARAEELFEEMQESGCAPCATTFNIMINSLGEQERWDEVKGLMGKMQSQGLLPNIVT 540

Query: 876  YNALLKGYVKTGALRDAEDVVSEMERGGVAPDEHTYGLLIDAYGNAGRWESARIVLKEME 697
            Y  L+  Y K+G   DA + +  M+  G+ P    Y  LI+AY   G  E A    + M 
Sbjct: 541  YTTLVDIYGKSGRFNDAIECLEIMKSAGLKPSPTMYNALINAYAQRGLSELALNAFRVMR 600

Query: 696  ANNVQPNSHVFSRILASYRDRGEWQRSFQVLKEMKNNGVTPGRKFYNVMIDTFGKYNCLH 517
            A+ ++P+    + ++ ++ +      +F VL+ MK N V P    Y  ++    + +  +
Sbjct: 601  ADGLKPSLLALNSLINAFGEDRRDAEAFSVLQYMKENDVKPDVVTYTTLMKALIRVDKFY 660

Query: 516  HAMDTFERMKLEGIEPD 466
               D +E M    + PD
Sbjct: 661  KVPDVYEEMIHSRVTPD 677



 Score = 79.7 bits (195), Expect = 9e-12
 Identities = 63/248 (25%), Positives = 110/248 (44%), Gaps = 2/248 (0%)
 Frame = -3

Query: 1302 YNALIGACARNDDLEKALNLMARMRRDGYQSDIVNYSLIIQSLLRNNSIDSTVLEKLYDE 1123
            YN +I    +++ L+ A+    RM  +G Q D V ++ +I   +   S      E+L++E
Sbjct: 436  YNVMIDTFGKSNCLDHAMATFERMLSEGIQPDTVTWNTLID--IHCKSGHHARAEELFEE 493

Query: 1122 IEADRIELDGQLLNDI--TVGFSKAGDVSRALYFLSVIQGNGLSPKTATLVVVISQLGNS 949
            ++           N +  ++G  +  D  + L  +  +Q  GL P   T   ++   G S
Sbjct: 494  MQESGCAPCATTFNIMINSLGEQERWDEVKGL--MGKMQSQGLLPNIVTYTTLVDIYGKS 551

Query: 948  GRTXXXXXXXXXXXEGGLKPRTRAYNALLKGYVKTGALRDAEDVVSEMERGGVAPDEHTY 769
            GR              GLKP    YNAL+  Y + G    A +    M   G+ P     
Sbjct: 552  GRFNDAIECLEIMKSAGLKPSPTMYNALINAYAQRGLSELALNAFRVMRADGLKPSLLAL 611

Query: 768  GLLIDAYGNAGRWESARIVLKEMEANNVQPNSHVFSRILASYRDRGEWQRSFQVLKEMKN 589
              LI+A+G   R   A  VL+ M+ N+V+P+   ++ ++ +     ++ +   V +EM +
Sbjct: 612  NSLINAFGEDRRDAEAFSVLQYMKENDVKPDVVTYTTLMKALIRVDKFYKVPDVYEEMIH 671

Query: 588  NGVTPGRK 565
            + VTP RK
Sbjct: 672  SRVTPDRK 679


>ref|XP_010094587.1| hypothetical protein L484_024883 [Morus notabilis]
            gi|587866903|gb|EXB56341.1| hypothetical protein
            L484_024883 [Morus notabilis]
          Length = 734

 Score =  825 bits (2132), Expect = 0.0
 Identities = 429/619 (69%), Positives = 482/619 (77%), Gaps = 14/619 (2%)
 Frame = -3

Query: 1815 IHITSPPSLRHHHQ------------FFPTAISLVTCTTTTASLSSHQLSLXXXXXXXXX 1672
            I  T+    RHHHQ            F   A ++ T  +  A LSS   S+         
Sbjct: 16   IQTTTTFHTRHHHQHHYHYTSSQLLLFSAAASAVSTSGSGEAPLSSSSSSMRRRFDDEND 75

Query: 1671 XDVASLSNRRYDFSLLLQFLSTHTPDHSS--NSADSPTQLHPAELRLAESYRAVPAPLWH 1498
              + SL NRRYDF+ LL FLS  T   ++  + +D PT L   E  LAESYRAVPA LWH
Sbjct: 76   --LVSLRNRRYDFNPLLNFLSNRTNISAATESGSDPPTSLDREEFELAESYRAVPALLWH 133

Query: 1497 XXXXXXXXXXXXXSTAYALVTWLQKHNLCFSYELLYSILIHALGRSDKLYEAFLFSQRQR 1318
                           AYA+V+WLQKHNLCFSYELLYSILIHALGRS+KLYEAFL SQRQ 
Sbjct: 134  SLLKSLCSKSSSIGLAYAVVSWLQKHNLCFSYELLYSILIHALGRSEKLYEAFLLSQRQT 193

Query: 1317 LTPLTYNALIGACARNDDLEKALNLMARMRRDGYQSDIVNYSLIIQSLLRNNSIDSTVLE 1138
            LTPLTYNALIGACARNDDLEKALNLMARMR+DG+ SD VNYSLIIQSL R N IDS +L+
Sbjct: 194  LTPLTYNALIGACARNDDLEKALNLMARMRQDGFPSDFVNYSLIIQSLTRKNKIDSPILQ 253

Query: 1137 KLYDEIEADRIELDGQLLNDITVGFSKAGDVSRALYFLSVIQGNGLSPKTATLVVVISQL 958
            KLY EIE D+IELDGQLLNDI VGF+KAGD S+A++FL+V+Q  GLSPKTATL  VIS L
Sbjct: 254  KLYKEIECDKIELDGQLLNDIIVGFAKAGDPSQAMHFLAVVQAMGLSPKTATLTAVISAL 313

Query: 957  GNSGRTXXXXXXXXXXXEGGLKPRTRAYNALLKGYVKTGALRDAEDVVSEMERGGVAPDE 778
            GNSGR            +GGL+PRTRAYNALLKGYVK  +L+DAE VVSEME  GV+PDE
Sbjct: 314  GNSGRIVEAEALFEEIKDGGLQPRTRAYNALLKGYVKASSLKDAESVVSEMEMNGVSPDE 373

Query: 777  HTYGLLIDAYGNAGRWESARIVLKEMEANNVQPNSHVFSRILASYRDRGEWQRSFQVLKE 598
            HTY LLIDAY NAGRWESARIVLKEMEA+NVQPNS+VFSRILASYRDRGEWQ++FQVL+E
Sbjct: 374  HTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSRILASYRDRGEWQKTFQVLRE 433

Query: 597  MKNNGVTPGRKFYNVMIDTFGKYNCLHHAMDTFERMKLEGIEPDTVTWNTLIDSHCKHGH 418
            MK++GV P R FYNVMIDTFGK+NCL HAM TFERM L+GI+PDTVTWNTLI+ HCK G 
Sbjct: 434  MKSSGVRPDRHFYNVMIDTFGKFNCLDHAMATFERMILDGIQPDTVTWNTLINCHCKAGR 493

Query: 417  HNKAEELFVAMQTSGCLPCTTTYNIMINSFGEQERWEDVKDLLGKMQSQGLLHNVVTYTT 238
            H +AEELF  MQ  G  PC TTYNI+INSFGEQERW+DVK LLGKMQSQGLL NVVTYTT
Sbjct: 494  HERAEELFEEMQERGYPPCATTYNILINSFGEQERWDDVKVLLGKMQSQGLLPNVVTYTT 553

Query: 237  LVDIYGQSGRFTDAIECFEVMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMRGEG 58
            L+DIYGQSGRF DA++C + MK+ GLKPSSTMYNALINAYAQRGLSEQA+NAFR+MRG+G
Sbjct: 554  LIDIYGQSGRFNDAMDCLQDMKTSGLKPSSTMYNALINAYAQRGLSEQALNAFRLMRGDG 613

Query: 57   LKPSLLALNSLINAFSEDR 1
            LKPS+LALNSLINAF EDR
Sbjct: 614  LKPSILALNSLINAFGEDR 632


>ref|XP_010266140.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial isoform X2 [Nelumbo nucifera]
          Length = 616

 Score =  817 bits (2110), Expect = 0.0
 Identities = 415/570 (72%), Positives = 461/570 (80%), Gaps = 7/570 (1%)
 Frame = -3

Query: 1797 PSLRHHHQFFPTAISLVTCTTTTAS-LSSHQLSLXXXXXXXXXXDVASLSNRRYDFSLLL 1621
            P+LRHHH F    I+L T   T+A+ +++   SL             SL NRRYDF  L+
Sbjct: 20   PNLRHHHFFPLPPITLFTTAVTSATTIATTSSSLDNCN---------SLHNRRYDFDPLI 70

Query: 1620 QFLSTHTP------DHSSNSADSPTQLHPAELRLAESYRAVPAPLWHXXXXXXXXXXXXX 1459
            +FLS+ T         S +  DSPT L P ELRLAESYRAVPAPLWH             
Sbjct: 71   RFLSSTTAYSTTSDTDSDSDTDSPTSLDPIELRLAESYRAVPAPLWHSLLKSLCSSPSTL 130

Query: 1458 STAYALVTWLQKHNLCFSYELLYSILIHALGRSDKLYEAFLFSQRQRLTPLTYNALIGAC 1279
             TAYALV+WLQ+HNLCFSYELLYSILIHALGRSDKLYEAFL SQRQ LTPLTYNALIGAC
Sbjct: 131  ETAYALVSWLQRHNLCFSYELLYSILIHALGRSDKLYEAFLLSQRQILTPLTYNALIGAC 190

Query: 1278 ARNDDLEKALNLMARMRRDGYQSDIVNYSLIIQSLLRNNSIDSTVLEKLYDEIEADRIEL 1099
            ARNDDLEKALNLM+RMRRDGYQSD VNYSLIIQSL R N +DS+VL+KLY E+E D+IEL
Sbjct: 191  ARNDDLEKALNLMSRMRRDGYQSDFVNYSLIIQSLTRTNKVDSSVLQKLYGEMETDKIEL 250

Query: 1098 DGQLLNDITVGFSKAGDVSRALYFLSVIQGNGLSPKTATLVVVISQLGNSGRTXXXXXXX 919
            DGQLLND+ V F+KAGD  RA++FL+++QG GLSPKTATLV VI+ LGN GRT       
Sbjct: 251  DGQLLNDLIVAFAKAGDPDRAMFFLAMVQGQGLSPKTATLVAVIAALGNLGRTEEAEAIF 310

Query: 918  XXXXEGGLKPRTRAYNALLKGYVKTGALRDAEDVVSEMERGGVAPDEHTYGLLIDAYGNA 739
                EGGLKPRTRAYNALLKGYVKTG+LRDAE +VSEMERGG++PDEHTY LLIDAY NA
Sbjct: 311  EEMKEGGLKPRTRAYNALLKGYVKTGSLRDAESIVSEMERGGLSPDEHTYSLLIDAYANA 370

Query: 738  GRWESARIVLKEMEANNVQPNSHVFSRILASYRDRGEWQRSFQVLKEMKNNGVTPGRKFY 559
            GRWESARIVLKEMEANNVQPNS+VFSRILASYRDRGEWQ+SF VLKEM+++GV P R FY
Sbjct: 371  GRWESARIVLKEMEANNVQPNSYVFSRILASYRDRGEWQKSFSVLKEMRSSGVRPDRHFY 430

Query: 558  NVMIDTFGKYNCLHHAMDTFERMKLEGIEPDTVTWNTLIDSHCKHGHHNKAEELFVAMQT 379
            NVMIDTFGKYNCL H M TFERM+L+GI+PDTVTWNTLID HCK G H++AEELF AMQ 
Sbjct: 431  NVMIDTFGKYNCLEHTMATFERMQLDGIQPDTVTWNTLIDCHCKSGRHDRAEELFQAMQE 490

Query: 378  SGCLPCTTTYNIMINSFGEQERWEDVKDLLGKMQSQGLLHNVVTYTTLVDIYGQSGRFTD 199
            SGCLPCTTTYNIMINS GEQE+WE+VK LLGKMQSQGLL NVVTYTTL+DIYGQSGRF D
Sbjct: 491  SGCLPCTTTYNIMINSLGEQEKWEEVKSLLGKMQSQGLLPNVVTYTTLIDIYGQSGRFKD 550

Query: 198  AIECFEVMKSVGLKPSSTMYNALINAYAQR 109
            AIEC E MKS GLKPS TMY+AL+NAYAQR
Sbjct: 551  AIECLEAMKSAGLKPSPTMYHALVNAYAQR 580


>ref|XP_008377072.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Malus domestica]
          Length = 721

 Score =  816 bits (2107), Expect = 0.0
 Identities = 424/637 (66%), Positives = 481/637 (75%), Gaps = 32/637 (5%)
 Frame = -3

Query: 1815 IHITSPPSLRHHHQFFPTAISLVTCTTTTASLSSHQLSLXXXXXXXXXXDVASLSNRR-- 1642
            I + SP  +RHHH  +P     ++ T   A  +S +  L           + S S RR  
Sbjct: 15   IQLASPTLIRHHHHVWP-----LSATAAAAVTNSSEPHLPPIPSSSTTIHLTSTSRRRRF 69

Query: 1641 ---------YDFSLLLQFL-------------------STHTPDHSSNSADSPTQLHPAE 1546
                     YDF  LL FL                   S+ +   SS+S  S T L P+E
Sbjct: 70   GDDQAAASPYDFGPLLTFLANSLSSDNDSASSSSXXSXSSSSSSSSSSSTSSXTSLDPSE 129

Query: 1545 LRLAESYRAVPAPLWHXXXXXXXXXXXXXST--AYALVTWLQKHNLCFSYELLYSILIHA 1372
             +LA+SYRAVPAPLWH                 AYA+V+WLQKHNLCFSYELLYSILIHA
Sbjct: 130  FQLAQSYRAVPAPLWHSLLKSLCASHSSSDIGLAYAVVSWLQKHNLCFSYELLYSILIHA 189

Query: 1371 LGRSDKLYEAFLFSQRQRLTPLTYNALIGACARNDDLEKALNLMARMRRDGYQSDIVNYS 1192
            LGRS+KLYEAFL SQRQ LTPLTYNALIGACARN DLEKAL+LM+RMR+DGY+SD VNYS
Sbjct: 190  LGRSEKLYEAFLLSQRQSLTPLTYNALIGACARNGDLEKALHLMSRMRQDGYRSDFVNYS 249

Query: 1191 LIIQSLLRNNSIDSTVLEKLYDEIEADRIELDGQLLNDITVGFSKAGDVSRALYFLSVIQ 1012
            LIIQSL R+N IDS ++ KLY EIE++ IE+DGQL NDI  GF+KAG+ S+A++ L+++Q
Sbjct: 250  LIIQSLTRSNKIDSPIMFKLYREIESESIEIDGQLFNDIIAGFAKAGEPSQAVHLLAMVQ 309

Query: 1011 GNGLSPKTATLVVVISQLGNSGRTXXXXXXXXXXXEGGLKPRTRAYNALLKGYVKTGALR 832
              GLSPKTATLV VIS LGNSGR            EGGL+PRTRAYNALLKGYVK G L+
Sbjct: 310  ATGLSPKTATLVAVISALGNSGRVVEAEAIFEEMREGGLQPRTRAYNALLKGYVKAGQLK 369

Query: 831  DAEDVVSEMERGGVAPDEHTYGLLIDAYGNAGRWESARIVLKEMEANNVQPNSHVFSRIL 652
            DAE +VS+ME+ G++PDEHTY LLIDAY NAGRWESARIVLKEMEA+NVQPNS+VFSRIL
Sbjct: 370  DAESIVSQMEKSGISPDEHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSRIL 429

Query: 651  ASYRDRGEWQRSFQVLKEMKNNGVTPGRKFYNVMIDTFGKYNCLHHAMDTFERMKLEGIE 472
            ASYRDRGEWQ+SFQVL+EMK++GV P R FYNVMIDTFGK NCL HAM TFERM  EGI 
Sbjct: 430  ASYRDRGEWQKSFQVLREMKSSGVRPDRHFYNVMIDTFGKSNCLDHAMATFERMLSEGIH 489

Query: 471  PDTVTWNTLIDSHCKHGHHNKAEELFVAMQTSGCLPCTTTYNIMINSFGEQERWEDVKDL 292
            PDTVTWNTLID HCK GHH +AEELF  MQ SGC PC TTYNIMINSFGEQ+RW++VK L
Sbjct: 490  PDTVTWNTLIDCHCKSGHHVRAEELFEEMQQSGCAPCATTYNIMINSFGEQQRWDEVKGL 549

Query: 291  LGKMQSQGLLHNVVTYTTLVDIYGQSGRFTDAIECFEVMKSVGLKPSSTMYNALINAYAQ 112
            LGKMQSQGLL N+VTYTTLVDIYG+SGRFTDAIEC EVMKS G+KPS TMYNALINAYAQ
Sbjct: 550  LGKMQSQGLLPNIVTYTTLVDIYGKSGRFTDAIECLEVMKSAGMKPSPTMYNALINAYAQ 609

Query: 111  RGLSEQAVNAFRVMRGEGLKPSLLALNSLINAFSEDR 1
            RGLSEQA+NAFRVMR +GLKPS LALNSLINAF EDR
Sbjct: 610  RGLSEQALNAFRVMRADGLKPSPLALNSLINAFGEDR 646



 Score =  153 bits (387), Expect = 5e-34
 Identities = 107/455 (23%), Positives = 201/455 (44%), Gaps = 42/455 (9%)
 Frame = -3

Query: 1392 YSILIHALGRSDKLYEAFLF-------SQRQRLTPLTYNALIGACARNDDLEKALNLMAR 1234
            YS++I +L RS+K+    +F       S+   +    +N +I   A+  +  +A++L+A 
Sbjct: 248  YSLIIQSLTRSNKIDSPIMFKLYREIESESIEIDGQLFNDIIAGFAKAGEPSQAVHLLAM 307

Query: 1233 MRRDGYQSDIVNYSLIIQSLLRNNSIDSTVLEKLYDEIEADRIELDGQLLNDITVGFSKA 1054
            ++  G          +I +L   NS      E +++E+    ++   +  N +  G+ KA
Sbjct: 308  VQATGLSPKTATLVAVISAL--GNSGRVVEAEAIFEEMREGGLQPRTRAYNALLKGYVKA 365

Query: 1053 GDVSRALYFLSVIQGNGLSPKTATLVVVISQLGNSGRTXXXXXXXXXXXEGGLKPRTRAY 874
            G +  A   +S ++ +G+SP   T  ++I    N+GR               ++P +  +
Sbjct: 366  GQLKDAESIVSQMEKSGISPDEHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVF 425

Query: 873  NALLKGYVKTGALRDAEDVVSEMERGGVAPDEHTYGLLIDAYGNAGRWESARIVLKEMEA 694
            + +L  Y   G  + +  V+ EM+  GV PD H Y ++ID +G +   + A    + M +
Sbjct: 426  SRILASYRDRGEWQKSFQVLREMKSSGVRPDRHFYNVMIDTFGKSNCLDHAMATFERMLS 485

Query: 693  NNVQPNSHVFSRILASYRDRGEWQRSFQVLKEMKNNGVTPGRKFYNVMIDTFGKYNCLHH 514
              + P++  ++ ++  +   G   R+ ++ +EM+ +G  P    YN+MI++FG+      
Sbjct: 486  EGIHPDTVTWNTLIDCHCKSGHHVRAEELFEEMQQSGCAPCATTYNIMINSFGEQQRWDE 545

Query: 513  AMDTFERMKLEGIEPDTVTWNTLIDSHCKHGHHNKAEELFVAMQTSGCLPCTTTYNIMIN 334
                  +M+ +G+ P+ VT+ TL+D + K G    A E    M+++G  P  T YN +IN
Sbjct: 546  VKGLLGKMQSQGLLPNIVTYTTLVDIYGKSGRFTDAIECLEVMKSAGMKPSPTMYNALIN 605

Query: 333  S-----------------------------------FGEQERWEDVKDLLGKMQSQGLLH 259
            +                                   FGE  R  +   +L  M+   L  
Sbjct: 606  AYAQRGLSEQALNAFRVMRADGLKPSPLALNSLINAFGEDRRDTEAFSVLQYMKENDLKP 665

Query: 258  NVVTYTTLVDIYGQSGRFTDAIECFEVMKSVGLKP 154
            +VVTYTTL+    +  +F      +E M   G  P
Sbjct: 666  DVVTYTTLMKTLIRVDKFCKVPAVYEEMIMSGCTP 700



 Score = 89.7 bits (221), Expect = 9e-15
 Identities = 71/334 (21%), Positives = 143/334 (42%), Gaps = 5/334 (1%)
 Frame = -3

Query: 1452 AYALVTWLQKHNLCFSYELLYSILIHALGRSDKLYEAFLFSQRQRLTPLTYNA-----LI 1288
            A ++V+ ++K  +    E  YS+LI A   + +   A +  +    + +  N+     ++
Sbjct: 371  AESIVSQMEKSGISPD-EHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSRIL 429

Query: 1287 GACARNDDLEKALNLMARMRRDGYQSDIVNYSLIIQSLLRNNSIDSTVLEKLYDEIEADR 1108
             +     + +K+  ++  M+  G + D   Y+++I +  ++N +D  +    ++ + ++ 
Sbjct: 430  ASYRDRGEWQKSFQVLREMKSSGVRPDRHFYNVMIDTFGKSNCLDHAMAT--FERMLSEG 487

Query: 1107 IELDGQLLNDITVGFSKAGDVSRALYFLSVIQGNGLSPKTATLVVVISQLGNSGRTXXXX 928
            I  D    N +     K+G   RA      +Q +G +P   T  ++I+  G   R     
Sbjct: 488  IHPDTVTWNTLIDCHCKSGHHVRAEELFEEMQQSGCAPCATTYNIMINSFGEQQRWDEVK 547

Query: 927  XXXXXXXEGGLKPRTRAYNALLKGYVKTGALRDAEDVVSEMERGGVAPDEHTYGLLIDAY 748
                     GL P    Y  L+  Y K+G   DA + +  M+  G+ P    Y  LI+AY
Sbjct: 548  GLLGKMQSQGLLPNIVTYTTLVDIYGKSGRFTDAIECLEVMKSAGMKPSPTMYNALINAY 607

Query: 747  GNAGRWESARIVLKEMEANNVQPNSHVFSRILASYRDRGEWQRSFQVLKEMKNNGVTPGR 568
               G  E A    + M A+ ++P+    + ++ ++ +      +F VL+ MK N + P  
Sbjct: 608  AQRGLSEQALNAFRVMRADGLKPSPLALNSLINAFGEDRRDTEAFSVLQYMKENDLKPDV 667

Query: 567  KFYNVMIDTFGKYNCLHHAMDTFERMKLEGIEPD 466
              Y  ++ T  + +        +E M + G  PD
Sbjct: 668  VTYTTLMKTLIRVDKFCKVPAVYEEMIMSGCTPD 701


>ref|XP_007225185.1| hypothetical protein PRUPE_ppa002191mg [Prunus persica]
            gi|462422121|gb|EMJ26384.1| hypothetical protein
            PRUPE_ppa002191mg [Prunus persica]
          Length = 703

 Score =  815 bits (2104), Expect = 0.0
 Identities = 420/602 (69%), Positives = 473/602 (78%), Gaps = 7/602 (1%)
 Frame = -3

Query: 1785 HHHQFFPTAISLVTCTTTTASLSSH------QLSLXXXXXXXXXXDVASLSNRRYDFSLL 1624
            HHH F   ++S  T    T S  +H        S           D A++S  RYDFS L
Sbjct: 31   HHHMFHLWSLSATTAAAVTNSSQAHLPPIPSSTSTSNSRRRSFDDDQAAVS--RYDFSPL 88

Query: 1623 LQFLSTHTPDHSSNSADSPTQLHPAELRLAESYRAVPAPLWHXXXXXXXXXXXXXST-AY 1447
            L FL+  +   SS SA SPT L PAE +LAESYRAVPAPLWH                AY
Sbjct: 89   LTFLAAKSMSMSS-SASSPTSLDPAEFQLAESYRAVPAPLWHSLLKSLCSSSSSDIQLAY 147

Query: 1446 ALVTWLQKHNLCFSYELLYSILIHALGRSDKLYEAFLFSQRQRLTPLTYNALIGACARND 1267
            A+V+WLQKHNLCFSYELLYSILIHALGRS+KLYEAFL SQRQ LTPLTYNALIGACARN 
Sbjct: 148  AVVSWLQKHNLCFSYELLYSILIHALGRSEKLYEAFLLSQRQSLTPLTYNALIGACARNG 207

Query: 1266 DLEKALNLMARMRRDGYQSDIVNYSLIIQSLLRNNSIDSTVLEKLYDEIEADRIELDGQL 1087
            DLEKAL+LM+RMR+DGY+SD VNYSLIIQSL R+N IDS ++ KLY EIE++ IE+DGQL
Sbjct: 208  DLEKALHLMSRMRQDGYRSDFVNYSLIIQSLSRSNKIDSPIMLKLYREIESESIEIDGQL 267

Query: 1086 LNDITVGFSKAGDVSRALYFLSVIQGNGLSPKTATLVVVISQLGNSGRTXXXXXXXXXXX 907
             NDI  GF+KAG+ ++A++ L+++Q  GLSPKTATLV +IS LGN GR            
Sbjct: 268  YNDIIAGFAKAGEPTQAMHLLAMVQATGLSPKTATLVALISALGNCGRVVEAEAIFEEMK 327

Query: 906  EGGLKPRTRAYNALLKGYVKTGALRDAEDVVSEMERGGVAPDEHTYGLLIDAYGNAGRWE 727
            EGGL+PRTRAYNALLKGYVK   L+DAE +VS+ME+ G++PDEHTY LLIDAY NAGRWE
Sbjct: 328  EGGLQPRTRAYNALLKGYVKAAQLKDAESIVSQMEKSGISPDEHTYSLLIDAYANAGRWE 387

Query: 726  SARIVLKEMEANNVQPNSHVFSRILASYRDRGEWQRSFQVLKEMKNNGVTPGRKFYNVMI 547
            SARIVLKEMEA+NVQPNS+VFSRILASYRDRGEWQ+SFQVL+EMK++GV P R FYNVMI
Sbjct: 388  SARIVLKEMEASNVQPNSYVFSRILASYRDRGEWQKSFQVLREMKSSGVRPDRHFYNVMI 447

Query: 546  DTFGKYNCLHHAMDTFERMKLEGIEPDTVTWNTLIDSHCKHGHHNKAEELFVAMQTSGCL 367
            DTFGK NCL H M TFERM  EGI+PDTVTWNTLID HCK GHH +AEELF  M  SGC 
Sbjct: 448  DTFGKSNCLDHVMATFERMLSEGIQPDTVTWNTLIDCHCKSGHHKRAEELFEEMHQSGCA 507

Query: 366  PCTTTYNIMINSFGEQERWEDVKDLLGKMQSQGLLHNVVTYTTLVDIYGQSGRFTDAIEC 187
            PC TTYNIMINSFGEQ+RW +VK LLGKMQ+QGLL N+VTYTTLVDIYG+SGRF DAIEC
Sbjct: 508  PCATTYNIMINSFGEQQRWVEVKGLLGKMQAQGLLPNIVTYTTLVDIYGKSGRFNDAIEC 567

Query: 186  FEVMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMRGEGLKPSLLALNSLINAFSE 7
             EVMKS GLKPS TMYNALINAYAQRGLSEQA+NAFRVMR +GLKPSLLALNSLINAF E
Sbjct: 568  LEVMKSAGLKPSPTMYNALINAYAQRGLSEQALNAFRVMRADGLKPSLLALNSLINAFGE 627

Query: 6    DR 1
            DR
Sbjct: 628  DR 629



 Score =  171 bits (432), Expect = 3e-39
 Identities = 102/429 (23%), Positives = 205/429 (47%), Gaps = 7/429 (1%)
 Frame = -3

Query: 1392 YSILIHALGRSDKLYEAFLF-------SQRQRLTPLTYNALIGACARNDDLEKALNLMAR 1234
            YS++I +L RS+K+    +        S+   +    YN +I   A+  +  +A++L+A 
Sbjct: 231  YSLIIQSLSRSNKIDSPIMLKLYREIESESIEIDGQLYNDIIAGFAKAGEPTQAMHLLAM 290

Query: 1233 MRRDGYQSDIVNYSLIIQSLLRNNSIDSTVLEKLYDEIEADRIELDGQLLNDITVGFSKA 1054
            ++  G          +I +L   N       E +++E++   ++   +  N +  G+ KA
Sbjct: 291  VQATGLSPKTATLVALISAL--GNCGRVVEAEAIFEEMKEGGLQPRTRAYNALLKGYVKA 348

Query: 1053 GDVSRALYFLSVIQGNGLSPKTATLVVVISQLGNSGRTXXXXXXXXXXXEGGLKPRTRAY 874
              +  A   +S ++ +G+SP   T  ++I    N+GR               ++P +  +
Sbjct: 349  AQLKDAESIVSQMEKSGISPDEHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVF 408

Query: 873  NALLKGYVKTGALRDAEDVVSEMERGGVAPDEHTYGLLIDAYGNAGRWESARIVLKEMEA 694
            + +L  Y   G  + +  V+ EM+  GV PD H Y ++ID +G +   +      + M +
Sbjct: 409  SRILASYRDRGEWQKSFQVLREMKSSGVRPDRHFYNVMIDTFGKSNCLDHVMATFERMLS 468

Query: 693  NNVQPNSHVFSRILASYRDRGEWQRSFQVLKEMKNNGVTPGRKFYNVMIDTFGKYNCLHH 514
              +QP++  ++ ++  +   G  +R+ ++ +EM  +G  P    YN+MI++FG+      
Sbjct: 469  EGIQPDTVTWNTLIDCHCKSGHHKRAEELFEEMHQSGCAPCATTYNIMINSFGEQQRWVE 528

Query: 513  AMDTFERMKLEGIEPDTVTWNTLIDSHCKHGHHNKAEELFVAMQTSGCLPCTTTYNIMIN 334
                  +M+ +G+ P+ VT+ TL+D + K G  N A E    M+++G  P  T YN +IN
Sbjct: 529  VKGLLGKMQAQGLLPNIVTYTTLVDIYGKSGRFNDAIECLEVMKSAGLKPSPTMYNALIN 588

Query: 333  SFGEQERWEDVKDLLGKMQSQGLLHNVVTYTTLVDIYGQSGRFTDAIECFEVMKSVGLKP 154
            ++ ++   E   +    M++ GL  +++   +L++ +G+  R  +A    + MK   LKP
Sbjct: 589  AYAQRGLSEQALNAFRVMRADGLKPSLLALNSLINAFGEDRRDAEAFSVLQYMKENDLKP 648

Query: 153  SSTMYNALI 127
                Y  L+
Sbjct: 649  DVVTYTTLM 657



 Score =  112 bits (280), Expect = 1e-21
 Identities = 86/380 (22%), Positives = 164/380 (43%), Gaps = 40/380 (10%)
 Frame = -3

Query: 1383 LIHALGRSDKLYEAFLFSQRQR---LTPLT--YNALIGACARNDDLEKALNLMARMRRDG 1219
            LI ALG   ++ EA    +  +   L P T  YNAL+    +   L+ A +++++M + G
Sbjct: 306  LISALGNCGRVVEAEAIFEEMKEGGLQPRTRAYNALLKGYVKAAQLKDAESIVSQMEKSG 365

Query: 1218 YQSDIVNYSLIIQSLLRNNSIDSTVLEKLYDEIEADRIELDGQLLNDITVGFSKAGDVSR 1039
               D   YSL+I +       +S  +  +  E+EA  ++ +  + + I   +   G+  +
Sbjct: 366  ISPDEHTYSLLIDAYANAGRWESARI--VLKEMEASNVQPNSYVFSRILASYRDRGEWQK 423

Query: 1038 ALYFLSVIQGNGLSPKTATLVVVISQLGNSGRTXXXXXXXXXXXEGGLKPRTRAYNALLK 859
            +   L  ++ +G+ P      V+I   G S                G++P T  +N L+ 
Sbjct: 424  SFQVLREMKSSGVRPDRHFYNVMIDTFGKSNCLDHVMATFERMLSEGIQPDTVTWNTLID 483

Query: 858  GYVKTGALRDAEDVVSEMERGGVAPDEHTYGL---------------------------- 763
             + K+G  + AE++  EM + G AP   TY +                            
Sbjct: 484  CHCKSGHHKRAEELFEEMHQSGCAPCATTYNIMINSFGEQQRWVEVKGLLGKMQAQGLLP 543

Query: 762  -------LIDAYGNAGRWESARIVLKEMEANNVQPNSHVFSRILASYRDRGEWQRSFQVL 604
                   L+D YG +GR+  A   L+ M++  ++P+  +++ ++ +Y  RG  +++    
Sbjct: 544  NIVTYTTLVDIYGKSGRFNDAIECLEVMKSAGLKPSPTMYNALINAYAQRGLSEQALNAF 603

Query: 603  KEMKNNGVTPGRKFYNVMIDTFGKYNCLHHAMDTFERMKLEGIEPDTVTWNTLIDSHCKH 424
            + M+ +G+ P     N +I+ FG+      A    + MK   ++PD VT+ TL+ +  + 
Sbjct: 604  RVMRADGLKPSLLALNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKTLIRV 663

Query: 423  GHHNKAEELFVAMQTSGCLP 364
                K   ++  M  S C P
Sbjct: 664  DKFYKVPAVYEEMILSRCTP 683



 Score = 89.0 bits (219), Expect = 1e-14
 Identities = 70/334 (20%), Positives = 143/334 (42%), Gaps = 5/334 (1%)
 Frame = -3

Query: 1452 AYALVTWLQKHNLCFSYELLYSILIHALGRSDKLYEAFLFSQRQRLTPLTYNA-----LI 1288
            A ++V+ ++K  +    E  YS+LI A   + +   A +  +    + +  N+     ++
Sbjct: 354  AESIVSQMEKSGISPD-EHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSRIL 412

Query: 1287 GACARNDDLEKALNLMARMRRDGYQSDIVNYSLIIQSLLRNNSIDSTVLEKLYDEIEADR 1108
             +     + +K+  ++  M+  G + D   Y+++I +  ++N +D  +    ++ + ++ 
Sbjct: 413  ASYRDRGEWQKSFQVLREMKSSGVRPDRHFYNVMIDTFGKSNCLDHVMAT--FERMLSEG 470

Query: 1107 IELDGQLLNDITVGFSKAGDVSRALYFLSVIQGNGLSPKTATLVVVISQLGNSGRTXXXX 928
            I+ D    N +     K+G   RA      +  +G +P   T  ++I+  G   R     
Sbjct: 471  IQPDTVTWNTLIDCHCKSGHHKRAEELFEEMHQSGCAPCATTYNIMINSFGEQQRWVEVK 530

Query: 927  XXXXXXXEGGLKPRTRAYNALLKGYVKTGALRDAEDVVSEMERGGVAPDEHTYGLLIDAY 748
                     GL P    Y  L+  Y K+G   DA + +  M+  G+ P    Y  LI+AY
Sbjct: 531  GLLGKMQAQGLLPNIVTYTTLVDIYGKSGRFNDAIECLEVMKSAGLKPSPTMYNALINAY 590

Query: 747  GNAGRWESARIVLKEMEANNVQPNSHVFSRILASYRDRGEWQRSFQVLKEMKNNGVTPGR 568
               G  E A    + M A+ ++P+    + ++ ++ +      +F VL+ MK N + P  
Sbjct: 591  AQRGLSEQALNAFRVMRADGLKPSLLALNSLINAFGEDRRDAEAFSVLQYMKENDLKPDV 650

Query: 567  KFYNVMIDTFGKYNCLHHAMDTFERMKLEGIEPD 466
              Y  ++ T  + +  +     +E M L    PD
Sbjct: 651  VTYTTLMKTLIRVDKFYKVPAVYEEMILSRCTPD 684



 Score = 75.1 bits (183), Expect = 2e-10
 Identities = 58/246 (23%), Positives = 101/246 (41%)
 Frame = -3

Query: 1302 YNALIGACARNDDLEKALNLMARMRRDGYQSDIVNYSLIIQSLLRNNSIDSTVLEKLYDE 1123
            YN +I    +++ L+  +    RM  +G Q D V ++ +I    ++        E+L++E
Sbjct: 443  YNVMIDTFGKSNCLDHVMATFERMLSEGIQPDTVTWNTLIDCHCKSGHHKRA--EELFEE 500

Query: 1122 IEADRIELDGQLLNDITVGFSKAGDVSRALYFLSVIQGNGLSPKTATLVVVISQLGNSGR 943
            +            N +   F +          L  +Q  GL P   T   ++   G SGR
Sbjct: 501  MHQSGCAPCATTYNIMINSFGEQQRWVEVKGLLGKMQAQGLLPNIVTYTTLVDIYGKSGR 560

Query: 942  TXXXXXXXXXXXEGGLKPRTRAYNALLKGYVKTGALRDAEDVVSEMERGGVAPDEHTYGL 763
                          GLKP    YNAL+  Y + G    A +    M   G+ P       
Sbjct: 561  FNDAIECLEVMKSAGLKPSPTMYNALINAYAQRGLSEQALNAFRVMRADGLKPSLLALNS 620

Query: 762  LIDAYGNAGRWESARIVLKEMEANNVQPNSHVFSRILASYRDRGEWQRSFQVLKEMKNNG 583
            LI+A+G   R   A  VL+ M+ N+++P+   ++ ++ +     ++ +   V +EM  + 
Sbjct: 621  LINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKTLIRVDKFYKVPAVYEEMILSR 680

Query: 582  VTPGRK 565
             TP RK
Sbjct: 681  CTPDRK 686


>ref|XP_008221147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial [Prunus mume]
          Length = 702

 Score =  814 bits (2102), Expect = 0.0
 Identities = 421/613 (68%), Positives = 476/613 (77%), Gaps = 10/613 (1%)
 Frame = -3

Query: 1809 ITSPPSLRHHHQ---FFPTAISLVTCTTTTASLSSH------QLSLXXXXXXXXXXDVAS 1657
            + SP  +RHHH    F   ++S  T    T S  +H        S             A+
Sbjct: 19   LASPILIRHHHHHHMFHLWSLSATTAAAVTNSSQAHLPPIPSSTSTSNSRRRSFDDHQAA 78

Query: 1656 LSNRRYDFSLLLQFLSTHTPDHSSNSADSPTQLHPAELRLAESYRAVPAPLWHXXXXXXX 1477
            +S  RYDF  LL FL+  +   SS SA SPT L PAE +LAESYRAVP+PLWH       
Sbjct: 79   VS--RYDFGPLLTFLAAKSMSMSS-SASSPTSLDPAEFQLAESYRAVPSPLWHSLLKSLC 135

Query: 1476 XXXXXXST-AYALVTWLQKHNLCFSYELLYSILIHALGRSDKLYEAFLFSQRQRLTPLTY 1300
                     AYA+V+WLQKHNLCFSYELLYSILIHALGRS+KLYEAFL SQRQ LTPLTY
Sbjct: 136  SSSSSDIQLAYAVVSWLQKHNLCFSYELLYSILIHALGRSEKLYEAFLLSQRQSLTPLTY 195

Query: 1299 NALIGACARNDDLEKALNLMARMRRDGYQSDIVNYSLIIQSLLRNNSIDSTVLEKLYDEI 1120
            NALIGACARN DLEKAL+LM+RMRRDGY+SD VNYSLIIQSL R+N IDS ++ KLY EI
Sbjct: 196  NALIGACARNGDLEKALHLMSRMRRDGYRSDFVNYSLIIQSLSRSNKIDSPIMLKLYREI 255

Query: 1119 EADRIELDGQLLNDITVGFSKAGDVSRALYFLSVIQGNGLSPKTATLVVVISQLGNSGRT 940
            E++ IE+DGQL NDI  GF+KAG+ ++A++ L+++Q  GLSPKTATLV +IS LGN GR 
Sbjct: 256  ESESIEIDGQLYNDIIAGFAKAGEPTQAMHLLAMVQATGLSPKTATLVALISALGNCGRV 315

Query: 939  XXXXXXXXXXXEGGLKPRTRAYNALLKGYVKTGALRDAEDVVSEMERGGVAPDEHTYGLL 760
                       EGGL+PRTRAYNALLKGYVK   L+DAE +VS+ME+ G++PDEHTY LL
Sbjct: 316  VEAEAIFEEMKEGGLQPRTRAYNALLKGYVKAAQLKDAESIVSQMEKSGISPDEHTYSLL 375

Query: 759  IDAYGNAGRWESARIVLKEMEANNVQPNSHVFSRILASYRDRGEWQRSFQVLKEMKNNGV 580
            IDAY NAGRWESARIVLKEMEA+NVQPNS+VFSRILASYRDRGEWQ+SFQVL+EMK++GV
Sbjct: 376  IDAYANAGRWESARIVLKEMEASNVQPNSYVFSRILASYRDRGEWQKSFQVLREMKSSGV 435

Query: 579  TPGRKFYNVMIDTFGKYNCLHHAMDTFERMKLEGIEPDTVTWNTLIDSHCKHGHHNKAEE 400
             P R FYNVMIDTFGK NCL H M TFERM  EGI+PDTVTWNTLID HCK GHH +AEE
Sbjct: 436  RPDRHFYNVMIDTFGKSNCLDHVMATFERMLSEGIQPDTVTWNTLIDCHCKSGHHKRAEE 495

Query: 399  LFVAMQTSGCLPCTTTYNIMINSFGEQERWEDVKDLLGKMQSQGLLHNVVTYTTLVDIYG 220
            LF  M  SGC PC TTYNIMINSFGEQ+RW +VK LLGKMQ+QGLL N+VTYTTLVDIYG
Sbjct: 496  LFEEMHQSGCAPCATTYNIMINSFGEQQRWVEVKGLLGKMQAQGLLPNIVTYTTLVDIYG 555

Query: 219  QSGRFTDAIECFEVMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMRGEGLKPSLL 40
            +SGRF DAIEC EVMKS GLKPS TMYNALINAYAQRGLSEQA+NAFRVMR +GLKPSLL
Sbjct: 556  KSGRFNDAIECLEVMKSAGLKPSPTMYNALINAYAQRGLSEQALNAFRVMRADGLKPSLL 615

Query: 39   ALNSLINAFSEDR 1
            ALNSLINAF EDR
Sbjct: 616  ALNSLINAFGEDR 628



 Score =  171 bits (432), Expect = 3e-39
 Identities = 102/429 (23%), Positives = 205/429 (47%), Gaps = 7/429 (1%)
 Frame = -3

Query: 1392 YSILIHALGRSDKLYEAFLF-------SQRQRLTPLTYNALIGACARNDDLEKALNLMAR 1234
            YS++I +L RS+K+    +        S+   +    YN +I   A+  +  +A++L+A 
Sbjct: 230  YSLIIQSLSRSNKIDSPIMLKLYREIESESIEIDGQLYNDIIAGFAKAGEPTQAMHLLAM 289

Query: 1233 MRRDGYQSDIVNYSLIIQSLLRNNSIDSTVLEKLYDEIEADRIELDGQLLNDITVGFSKA 1054
            ++  G          +I +L   N       E +++E++   ++   +  N +  G+ KA
Sbjct: 290  VQATGLSPKTATLVALISAL--GNCGRVVEAEAIFEEMKEGGLQPRTRAYNALLKGYVKA 347

Query: 1053 GDVSRALYFLSVIQGNGLSPKTATLVVVISQLGNSGRTXXXXXXXXXXXEGGLKPRTRAY 874
              +  A   +S ++ +G+SP   T  ++I    N+GR               ++P +  +
Sbjct: 348  AQLKDAESIVSQMEKSGISPDEHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVF 407

Query: 873  NALLKGYVKTGALRDAEDVVSEMERGGVAPDEHTYGLLIDAYGNAGRWESARIVLKEMEA 694
            + +L  Y   G  + +  V+ EM+  GV PD H Y ++ID +G +   +      + M +
Sbjct: 408  SRILASYRDRGEWQKSFQVLREMKSSGVRPDRHFYNVMIDTFGKSNCLDHVMATFERMLS 467

Query: 693  NNVQPNSHVFSRILASYRDRGEWQRSFQVLKEMKNNGVTPGRKFYNVMIDTFGKYNCLHH 514
              +QP++  ++ ++  +   G  +R+ ++ +EM  +G  P    YN+MI++FG+      
Sbjct: 468  EGIQPDTVTWNTLIDCHCKSGHHKRAEELFEEMHQSGCAPCATTYNIMINSFGEQQRWVE 527

Query: 513  AMDTFERMKLEGIEPDTVTWNTLIDSHCKHGHHNKAEELFVAMQTSGCLPCTTTYNIMIN 334
                  +M+ +G+ P+ VT+ TL+D + K G  N A E    M+++G  P  T YN +IN
Sbjct: 528  VKGLLGKMQAQGLLPNIVTYTTLVDIYGKSGRFNDAIECLEVMKSAGLKPSPTMYNALIN 587

Query: 333  SFGEQERWEDVKDLLGKMQSQGLLHNVVTYTTLVDIYGQSGRFTDAIECFEVMKSVGLKP 154
            ++ ++   E   +    M++ GL  +++   +L++ +G+  R  +A    + MK   LKP
Sbjct: 588  AYAQRGLSEQALNAFRVMRADGLKPSLLALNSLINAFGEDRRDAEAFSVLQYMKENDLKP 647

Query: 153  SSTMYNALI 127
                Y  L+
Sbjct: 648  DVVTYTTLM 656



 Score =  112 bits (280), Expect = 1e-21
 Identities = 86/380 (22%), Positives = 164/380 (43%), Gaps = 40/380 (10%)
 Frame = -3

Query: 1383 LIHALGRSDKLYEAFLFSQRQR---LTPLT--YNALIGACARNDDLEKALNLMARMRRDG 1219
            LI ALG   ++ EA    +  +   L P T  YNAL+    +   L+ A +++++M + G
Sbjct: 305  LISALGNCGRVVEAEAIFEEMKEGGLQPRTRAYNALLKGYVKAAQLKDAESIVSQMEKSG 364

Query: 1218 YQSDIVNYSLIIQSLLRNNSIDSTVLEKLYDEIEADRIELDGQLLNDITVGFSKAGDVSR 1039
               D   YSL+I +       +S  +  +  E+EA  ++ +  + + I   +   G+  +
Sbjct: 365  ISPDEHTYSLLIDAYANAGRWESARI--VLKEMEASNVQPNSYVFSRILASYRDRGEWQK 422

Query: 1038 ALYFLSVIQGNGLSPKTATLVVVISQLGNSGRTXXXXXXXXXXXEGGLKPRTRAYNALLK 859
            +   L  ++ +G+ P      V+I   G S                G++P T  +N L+ 
Sbjct: 423  SFQVLREMKSSGVRPDRHFYNVMIDTFGKSNCLDHVMATFERMLSEGIQPDTVTWNTLID 482

Query: 858  GYVKTGALRDAEDVVSEMERGGVAPDEHTYGL---------------------------- 763
             + K+G  + AE++  EM + G AP   TY +                            
Sbjct: 483  CHCKSGHHKRAEELFEEMHQSGCAPCATTYNIMINSFGEQQRWVEVKGLLGKMQAQGLLP 542

Query: 762  -------LIDAYGNAGRWESARIVLKEMEANNVQPNSHVFSRILASYRDRGEWQRSFQVL 604
                   L+D YG +GR+  A   L+ M++  ++P+  +++ ++ +Y  RG  +++    
Sbjct: 543  NIVTYTTLVDIYGKSGRFNDAIECLEVMKSAGLKPSPTMYNALINAYAQRGLSEQALNAF 602

Query: 603  KEMKNNGVTPGRKFYNVMIDTFGKYNCLHHAMDTFERMKLEGIEPDTVTWNTLIDSHCKH 424
            + M+ +G+ P     N +I+ FG+      A    + MK   ++PD VT+ TL+ +  + 
Sbjct: 603  RVMRADGLKPSLLALNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKTLIRV 662

Query: 423  GHHNKAEELFVAMQTSGCLP 364
                K   ++  M  S C P
Sbjct: 663  DKFYKVPAVYEEMILSRCTP 682



 Score = 89.0 bits (219), Expect = 1e-14
 Identities = 70/334 (20%), Positives = 143/334 (42%), Gaps = 5/334 (1%)
 Frame = -3

Query: 1452 AYALVTWLQKHNLCFSYELLYSILIHALGRSDKLYEAFLFSQRQRLTPLTYNA-----LI 1288
            A ++V+ ++K  +    E  YS+LI A   + +   A +  +    + +  N+     ++
Sbjct: 353  AESIVSQMEKSGISPD-EHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSRIL 411

Query: 1287 GACARNDDLEKALNLMARMRRDGYQSDIVNYSLIIQSLLRNNSIDSTVLEKLYDEIEADR 1108
             +     + +K+  ++  M+  G + D   Y+++I +  ++N +D  +    ++ + ++ 
Sbjct: 412  ASYRDRGEWQKSFQVLREMKSSGVRPDRHFYNVMIDTFGKSNCLDHVMAT--FERMLSEG 469

Query: 1107 IELDGQLLNDITVGFSKAGDVSRALYFLSVIQGNGLSPKTATLVVVISQLGNSGRTXXXX 928
            I+ D    N +     K+G   RA      +  +G +P   T  ++I+  G   R     
Sbjct: 470  IQPDTVTWNTLIDCHCKSGHHKRAEELFEEMHQSGCAPCATTYNIMINSFGEQQRWVEVK 529

Query: 927  XXXXXXXEGGLKPRTRAYNALLKGYVKTGALRDAEDVVSEMERGGVAPDEHTYGLLIDAY 748
                     GL P    Y  L+  Y K+G   DA + +  M+  G+ P    Y  LI+AY
Sbjct: 530  GLLGKMQAQGLLPNIVTYTTLVDIYGKSGRFNDAIECLEVMKSAGLKPSPTMYNALINAY 589

Query: 747  GNAGRWESARIVLKEMEANNVQPNSHVFSRILASYRDRGEWQRSFQVLKEMKNNGVTPGR 568
               G  E A    + M A+ ++P+    + ++ ++ +      +F VL+ MK N + P  
Sbjct: 590  AQRGLSEQALNAFRVMRADGLKPSLLALNSLINAFGEDRRDAEAFSVLQYMKENDLKPDV 649

Query: 567  KFYNVMIDTFGKYNCLHHAMDTFERMKLEGIEPD 466
              Y  ++ T  + +  +     +E M L    PD
Sbjct: 650  VTYTTLMKTLIRVDKFYKVPAVYEEMILSRCTPD 683



 Score = 75.1 bits (183), Expect = 2e-10
 Identities = 58/246 (23%), Positives = 101/246 (41%)
 Frame = -3

Query: 1302 YNALIGACARNDDLEKALNLMARMRRDGYQSDIVNYSLIIQSLLRNNSIDSTVLEKLYDE 1123
            YN +I    +++ L+  +    RM  +G Q D V ++ +I    ++        E+L++E
Sbjct: 442  YNVMIDTFGKSNCLDHVMATFERMLSEGIQPDTVTWNTLIDCHCKSGHHKRA--EELFEE 499

Query: 1122 IEADRIELDGQLLNDITVGFSKAGDVSRALYFLSVIQGNGLSPKTATLVVVISQLGNSGR 943
            +            N +   F +          L  +Q  GL P   T   ++   G SGR
Sbjct: 500  MHQSGCAPCATTYNIMINSFGEQQRWVEVKGLLGKMQAQGLLPNIVTYTTLVDIYGKSGR 559

Query: 942  TXXXXXXXXXXXEGGLKPRTRAYNALLKGYVKTGALRDAEDVVSEMERGGVAPDEHTYGL 763
                          GLKP    YNAL+  Y + G    A +    M   G+ P       
Sbjct: 560  FNDAIECLEVMKSAGLKPSPTMYNALINAYAQRGLSEQALNAFRVMRADGLKPSLLALNS 619

Query: 762  LIDAYGNAGRWESARIVLKEMEANNVQPNSHVFSRILASYRDRGEWQRSFQVLKEMKNNG 583
            LI+A+G   R   A  VL+ M+ N+++P+   ++ ++ +     ++ +   V +EM  + 
Sbjct: 620  LINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKTLIRVDKFYKVPAVYEEMILSR 679

Query: 582  VTPGRK 565
             TP RK
Sbjct: 680  CTPDRK 685


>gb|KHG22213.1| hypothetical protein F383_28108 [Gossypium arboreum]
          Length = 706

 Score =  813 bits (2100), Expect = 0.0
 Identities = 416/561 (74%), Positives = 462/561 (82%), Gaps = 6/561 (1%)
 Frame = -3

Query: 1665 VASLSNRRYDFSLLLQFLS-THTPDHSSNSADSPTQLHPAELRLAESYRAVPAPLWHXXX 1489
            V SL  RRYDF+ LL +LS +++   S + + SPT L P E +LAESYRAVPAPLWH   
Sbjct: 71   VLSLHKRRYDFTPLLNYLSRSNSASDSDSDSASPTSLDPIEFQLAESYRAVPAPLWHSLL 130

Query: 1488 XXXXXXXXXXST-----AYALVTWLQKHNLCFSYELLYSILIHALGRSDKLYEAFLFSQR 1324
                      S+     AYA+V+WLQ+HNLCFSYELLYSILIHALGRS+KLYEAFL SQR
Sbjct: 131  KSLCASSSSSSSSSINLAYAVVSWLQRHNLCFSYELLYSILIHALGRSEKLYEAFLLSQR 190

Query: 1323 QRLTPLTYNALIGACARNDDLEKALNLMARMRRDGYQSDIVNYSLIIQSLLRNNSIDSTV 1144
            Q LTPLTYNALI ACARNDDLEKALNLM+RMR+DGYQSD VNYSLIIQSL RNN IDS++
Sbjct: 191  QSLTPLTYNALINACARNDDLEKALNLMSRMRQDGYQSDFVNYSLIIQSLTRNNKIDSSL 250

Query: 1143 LEKLYDEIEADRIELDGQLLNDITVGFSKAGDVSRALYFLSVIQGNGLSPKTATLVVVIS 964
            L+KLY EIE DRIE+DGQLLNDI VGF+KA D SRAL FL++ Q  GLSPKTATLV VI 
Sbjct: 251  LQKLYGEIECDRIEVDGQLLNDIIVGFAKANDPSRALKFLAMAQAIGLSPKTATLVAVIY 310

Query: 963  QLGNSGRTXXXXXXXXXXXEGGLKPRTRAYNALLKGYVKTGALRDAEDVVSEMERGGVAP 784
             LG  GR              GLKPRTRAYNALLKGYVK+G+L+DAE VVSEMER GV+P
Sbjct: 311  SLGCCGRIAEAEAVFEEMKGSGLKPRTRAYNALLKGYVKSGSLKDAELVVSEMERSGVSP 370

Query: 783  DEHTYGLLIDAYGNAGRWESARIVLKEMEANNVQPNSHVFSRILASYRDRGEWQRSFQVL 604
            DEHTY LLIDAY NAGRWESARIVLKEMEANNV+PNS V+SRILASYR++GEWQRSFQVL
Sbjct: 371  DEHTYSLLIDAYSNAGRWESARIVLKEMEANNVKPNSFVYSRILASYRNKGEWQRSFQVL 430

Query: 603  KEMKNNGVTPGRKFYNVMIDTFGKYNCLHHAMDTFERMKLEGIEPDTVTWNTLIDSHCKH 424
            KEMK+NG+ P R FYNVMIDTFGKYNCL HAM TF+RM  EGIEPDTVTWNTLID HCK 
Sbjct: 431  KEMKSNGIQPDRHFYNVMIDTFGKYNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCKA 490

Query: 423  GHHNKAEELFVAMQTSGCLPCTTTYNIMINSFGEQERWEDVKDLLGKMQSQGLLHNVVTY 244
            G H++AE+LF  M+  G  PCTTTYNIMINS GEQERW+DVK LLGKMQ +GLL N+VTY
Sbjct: 491  GWHDRAEQLFEEMKEKGYSPCTTTYNIMINSLGEQERWDDVKSLLGKMQGEGLLPNIVTY 550

Query: 243  TTLVDIYGQSGRFTDAIECFEVMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMRG 64
            TTLVDIYG+SGRF+DAIEC E+MKS GLKPSSTMYNALINAYAQRGLSEQA+NA RVM  
Sbjct: 551  TTLVDIYGKSGRFSDAIECLELMKSAGLKPSSTMYNALINAYAQRGLSEQAMNALRVMGA 610

Query: 63   EGLKPSLLALNSLINAFSEDR 1
            +GLKP+LLALNSLINAF EDR
Sbjct: 611  DGLKPNLLALNSLINAFGEDR 631



 Score =  105 bits (263), Expect = 1e-19
 Identities = 77/317 (24%), Positives = 137/317 (43%), Gaps = 5/317 (1%)
 Frame = -3

Query: 1401 ELLYSILIHALGRSDKLYEAFLFSQRQRLTPL-----TYNALIGACARNDDLEKALNLMA 1237
            E  YS+LI A   + +   A +  +      +      Y+ ++ +     + +++  ++ 
Sbjct: 372  EHTYSLLIDAYSNAGRWESARIVLKEMEANNVKPNSFVYSRILASYRNKGEWQRSFQVLK 431

Query: 1236 RMRRDGYQSDIVNYSLIIQSLLRNNSIDSTVLEKLYDEIEADRIELDGQLLNDITVGFSK 1057
             M+ +G Q D   Y+++I +  + N +D  +    +D + ++ IE D    N +     K
Sbjct: 432  EMKSNGIQPDRHFYNVMIDTFGKYNCLDHAMAT--FDRMLSEGIEPDTVTWNTLIDCHCK 489

Query: 1056 AGDVSRALYFLSVIQGNGLSPKTATLVVVISQLGNSGRTXXXXXXXXXXXEGGLKPRTRA 877
            AG   RA      ++  G SP T T  ++I+ LG   R              GL P    
Sbjct: 490  AGWHDRAEQLFEEMKEKGYSPCTTTYNIMINSLGEQERWDDVKSLLGKMQGEGLLPNIVT 549

Query: 876  YNALLKGYVKTGALRDAEDVVSEMERGGVAPDEHTYGLLIDAYGNAGRWESARIVLKEME 697
            Y  L+  Y K+G   DA + +  M+  G+ P    Y  LI+AY   G  E A   L+ M 
Sbjct: 550  YTTLVDIYGKSGRFSDAIECLELMKSAGLKPSSTMYNALINAYAQRGLSEQAMNALRVMG 609

Query: 696  ANNVQPNSHVFSRILASYRDRGEWQRSFQVLKEMKNNGVTPGRKFYNVMIDTFGKYNCLH 517
            A+ ++PN    + ++ ++ +      +F VL+ MK NG+ P    Y  ++    + +  H
Sbjct: 610  ADGLKPNLLALNSLINAFGEDRRDVEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFH 669

Query: 516  HAMDTFERMKLEGIEPD 466
                 +E M L G  PD
Sbjct: 670  KVPAVYEEMILSGCTPD 686



 Score = 80.1 bits (196), Expect = 7e-12
 Identities = 63/248 (25%), Positives = 112/248 (45%), Gaps = 2/248 (0%)
 Frame = -3

Query: 1302 YNALIGACARNDDLEKALNLMARMRRDGYQSDIVNYSLIIQSLLRNNSIDSTVLEKLYDE 1123
            YN +I    + + L+ A+    RM  +G + D V ++ +I    +    D    E+L++E
Sbjct: 445  YNVMIDTFGKYNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCKAGWHDRA--EQLFEE 502

Query: 1122 IEADRIELDGQLLNDI--TVGFSKAGDVSRALYFLSVIQGNGLSPKTATLVVVISQLGNS 949
            ++           N +  ++G  +  D  ++L  L  +QG GL P   T   ++   G S
Sbjct: 503  MKEKGYSPCTTTYNIMINSLGEQERWDDVKSL--LGKMQGEGLLPNIVTYTTLVDIYGKS 560

Query: 948  GRTXXXXXXXXXXXEGGLKPRTRAYNALLKGYVKTGALRDAEDVVSEMERGGVAPDEHTY 769
            GR              GLKP +  YNAL+  Y + G    A + +  M   G+ P+    
Sbjct: 561  GRFSDAIECLELMKSAGLKPSSTMYNALINAYAQRGLSEQAMNALRVMGADGLKPNLLAL 620

Query: 768  GLLIDAYGNAGRWESARIVLKEMEANNVQPNSHVFSRILASYRDRGEWQRSFQVLKEMKN 589
              LI+A+G   R   A  VL+ M+ N ++P+   ++ ++ +     ++ +   V +EM  
Sbjct: 621  NSLINAFGEDRRDVEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMIL 680

Query: 588  NGVTPGRK 565
            +G TP RK
Sbjct: 681  SGCTPDRK 688



 Score = 62.0 bits (149), Expect = 2e-06
 Identities = 56/258 (21%), Positives = 110/258 (42%), Gaps = 7/258 (2%)
 Frame = -3

Query: 1392 YSILIHALGRSDKLYEAFLFSQRQRLTPLTYNALIGACARNDDLEKALNLMARMRRDGYQ 1213
            Y+ L HA+   D++      S+      +T+N LI    +    ++A  L   M+  GY 
Sbjct: 455  YNCLDHAMATFDRM-----LSEGIEPDTVTWNTLIDCHCKAGWHDRAEQLFEEMKEKGYS 509

Query: 1212 SDIVNYSLIIQSLLRNNSIDSTVLEKLYDEIEA--DRIELDGQLLNDITVG-----FSKA 1054
                 Y+++I SL           ++ +D++++   +++ +G L N +T       + K+
Sbjct: 510  PCTTTYNIMINSLGE---------QERWDDVKSLLGKMQGEGLLPNIVTYTTLVDIYGKS 560

Query: 1053 GDVSRALYFLSVIQGNGLSPKTATLVVVISQLGNSGRTXXXXXXXXXXXEGGLKPRTRAY 874
            G  S A+  L +++  GL P +     +I+     G +             GLKP   A 
Sbjct: 561  GRFSDAIECLELMKSAGLKPSSTMYNALINAYAQRGLSEQAMNALRVMGADGLKPNLLAL 620

Query: 873  NALLKGYVKTGALRDAEDVVSEMERGGVAPDEHTYGLLIDAYGNAGRWESARIVLKEMEA 694
            N+L+  + +     +A  V+  M+  G+ PD  TY  L+ A     ++     V +EM  
Sbjct: 621  NSLINAFGEDRRDVEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMIL 680

Query: 693  NNVQPNSHVFSRILASYR 640
            +   P+    + + ++ R
Sbjct: 681  SGCTPDRKARAMLRSALR 698


>ref|XP_012464747.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial isoform X1 [Gossypium raimondii]
            gi|823132894|ref|XP_012464753.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial isoform X1 [Gossypium raimondii]
          Length = 709

 Score =  811 bits (2096), Expect = 0.0
 Identities = 419/562 (74%), Positives = 461/562 (82%), Gaps = 7/562 (1%)
 Frame = -3

Query: 1665 VASLSNRRYDFSLLLQFLS--THTPDHSSNSADSPTQLHPAELRLAESYRAVPAPLWHXX 1492
            V SL  RRYDF+ LL +LS      D  S+SA SPT L P E +LAESYRAVPAPLWH  
Sbjct: 66   VLSLHKRRYDFTPLLNYLSRSNSASDLDSDSA-SPTSLDPIEFQLAESYRAVPAPLWHSL 124

Query: 1491 XXXXXXXXXXXST-----AYALVTWLQKHNLCFSYELLYSILIHALGRSDKLYEAFLFSQ 1327
                       S+     AYA+V+WLQ+HNLCFSYELLYSILIHALGRS+KLYEAFL SQ
Sbjct: 125  LKSLCASSSSSSSSSINLAYAVVSWLQRHNLCFSYELLYSILIHALGRSEKLYEAFLLSQ 184

Query: 1326 RQRLTPLTYNALIGACARNDDLEKALNLMARMRRDGYQSDIVNYSLIIQSLLRNNSIDST 1147
            RQ LTPLTYNALI ACARNDDLEKALNLM+RMR+DGYQSD VNYSLIIQSL RNN IDS+
Sbjct: 185  RQSLTPLTYNALINACARNDDLEKALNLMSRMRQDGYQSDFVNYSLIIQSLTRNNKIDSS 244

Query: 1146 VLEKLYDEIEADRIELDGQLLNDITVGFSKAGDVSRALYFLSVIQGNGLSPKTATLVVVI 967
            +L+KLY EIE DRIE+DGQLLNDI VGF+KA D SRAL FL++ Q  GLSPKTATLV VI
Sbjct: 245  LLQKLYGEIECDRIEVDGQLLNDIIVGFAKANDPSRALKFLAMAQAIGLSPKTATLVAVI 304

Query: 966  SQLGNSGRTXXXXXXXXXXXEGGLKPRTRAYNALLKGYVKTGALRDAEDVVSEMERGGVA 787
              LG  GR              GLKPRTRAYNALLKGYVK+G+L+DAE VVSEMER GV+
Sbjct: 305  YSLGCCGRIAEAEAVFEEMKGSGLKPRTRAYNALLKGYVKSGSLKDAELVVSEMERSGVS 364

Query: 786  PDEHTYGLLIDAYGNAGRWESARIVLKEMEANNVQPNSHVFSRILASYRDRGEWQRSFQV 607
            PDEHTY LLIDAY NAGRWESARIVLKEMEANNV+PNS V+SRILASYR++GEWQRSFQV
Sbjct: 365  PDEHTYSLLIDAYSNAGRWESARIVLKEMEANNVKPNSFVYSRILASYRNKGEWQRSFQV 424

Query: 606  LKEMKNNGVTPGRKFYNVMIDTFGKYNCLHHAMDTFERMKLEGIEPDTVTWNTLIDSHCK 427
            LKEMK+NG+ P R FYNVMIDTFGKYNCL HAM TF+RM  EGIEPDTVTWNTLID HCK
Sbjct: 425  LKEMKSNGIQPDRHFYNVMIDTFGKYNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCK 484

Query: 426  HGHHNKAEELFVAMQTSGCLPCTTTYNIMINSFGEQERWEDVKDLLGKMQSQGLLHNVVT 247
             G H++AE+LF  M+  G  PCTTTYNIMINS GEQERW+DVK LLGKMQ +GLL N+VT
Sbjct: 485  AGWHDRAEQLFEEMKEKGYSPCTTTYNIMINSLGEQERWDDVKSLLGKMQGEGLLPNIVT 544

Query: 246  YTTLVDIYGQSGRFTDAIECFEVMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMR 67
            YTTLVDIYG+SGRF+DAIEC E+MKS GLKPSSTMYNALINAYAQRGLSEQA+NA RVM 
Sbjct: 545  YTTLVDIYGKSGRFSDAIECLELMKSAGLKPSSTMYNALINAYAQRGLSEQAMNALRVMG 604

Query: 66   GEGLKPSLLALNSLINAFSEDR 1
             +GLKP+LLALNSLINAF EDR
Sbjct: 605  ADGLKPNLLALNSLINAFGEDR 626



 Score =  125 bits (314), Expect = 1e-25
 Identities = 92/389 (23%), Positives = 171/389 (43%), Gaps = 5/389 (1%)
 Frame = -3

Query: 1383 LIHALGRSDKLYEAFLFSQRQR---LTPLT--YNALIGACARNDDLEKALNLMARMRRDG 1219
            +I++LG   ++ EA    +  +   L P T  YNAL+    ++  L+ A  +++ M R G
Sbjct: 303  VIYSLGCCGRIAEAEAVFEEMKGSGLKPRTRAYNALLKGYVKSGSLKDAELVVSEMERSG 362

Query: 1218 YQSDIVNYSLIIQSLLRNNSIDSTVLEKLYDEIEADRIELDGQLLNDITVGFSKAGDVSR 1039
               D   YSL+I +       +S  +  +  E+EA+ ++ +  + + I   +   G+  R
Sbjct: 363  VSPDEHTYSLLIDAYSNAGRWESARI--VLKEMEANNVKPNSFVYSRILASYRNKGEWQR 420

Query: 1038 ALYFLSVIQGNGLSPKTATLVVVISQLGNSGRTXXXXXXXXXXXEGGLKPRTRAYNALLK 859
            +   L  ++ NG+ P      V+I   G                  G++P T  +N L+ 
Sbjct: 421  SFQVLKEMKSNGIQPDRHFYNVMIDTFGKYNCLDHAMATFDRMLSEGIEPDTVTWNTLID 480

Query: 858  GYVKTGALRDAEDVVSEMERGGVAPDEHTYGLLIDAYGNAGRWESARIVLKEMEANNVQP 679
             + K G    AE +  EM+  G +P   TY ++I++ G   RW+  + +L +M+   + P
Sbjct: 481  CHCKAGWHDRAEQLFEEMKEKGYSPCTTTYNIMINSLGEQERWDDVKSLLGKMQGEGLLP 540

Query: 678  NSHVFSRILASYRDRGEWQRSFQVLKEMKNNGVTPGRKFYNVMIDTFGKYNCLHHAMDTF 499
            N   ++ ++  Y   G +  + + L+ MK+ G+ P    YN +I+ + +      AM+  
Sbjct: 541  NIVTYTTLVDIYGKSGRFSDAIECLELMKSAGLKPSSTMYNALINAYAQRGLSEQAMNAL 600

Query: 498  ERMKLEGIEPDTVTWNTLIDSHCKHGHHNKAEELFVAMQTSGCLPCTTTYNIMINSFGEQ 319
              M  +G++P+ +  N+LI                                   N+FGE 
Sbjct: 601  RVMGADGLKPNLLALNSLI-----------------------------------NAFGED 625

Query: 318  ERWEDVKDLLGKMQSQGLLHNVVTYTTLV 232
             R  +   +L  M+  G+  +VVTYTTL+
Sbjct: 626  RRDVEAFAVLQYMKENGVKPDVVTYTTLM 654


>ref|XP_012464758.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial isoform X2 [Gossypium raimondii]
            gi|763746834|gb|KJB14273.1| hypothetical protein
            B456_002G117100 [Gossypium raimondii]
          Length = 701

 Score =  811 bits (2096), Expect = 0.0
 Identities = 419/562 (74%), Positives = 461/562 (82%), Gaps = 7/562 (1%)
 Frame = -3

Query: 1665 VASLSNRRYDFSLLLQFLS--THTPDHSSNSADSPTQLHPAELRLAESYRAVPAPLWHXX 1492
            V SL  RRYDF+ LL +LS      D  S+SA SPT L P E +LAESYRAVPAPLWH  
Sbjct: 66   VLSLHKRRYDFTPLLNYLSRSNSASDLDSDSA-SPTSLDPIEFQLAESYRAVPAPLWHSL 124

Query: 1491 XXXXXXXXXXXST-----AYALVTWLQKHNLCFSYELLYSILIHALGRSDKLYEAFLFSQ 1327
                       S+     AYA+V+WLQ+HNLCFSYELLYSILIHALGRS+KLYEAFL SQ
Sbjct: 125  LKSLCASSSSSSSSSINLAYAVVSWLQRHNLCFSYELLYSILIHALGRSEKLYEAFLLSQ 184

Query: 1326 RQRLTPLTYNALIGACARNDDLEKALNLMARMRRDGYQSDIVNYSLIIQSLLRNNSIDST 1147
            RQ LTPLTYNALI ACARNDDLEKALNLM+RMR+DGYQSD VNYSLIIQSL RNN IDS+
Sbjct: 185  RQSLTPLTYNALINACARNDDLEKALNLMSRMRQDGYQSDFVNYSLIIQSLTRNNKIDSS 244

Query: 1146 VLEKLYDEIEADRIELDGQLLNDITVGFSKAGDVSRALYFLSVIQGNGLSPKTATLVVVI 967
            +L+KLY EIE DRIE+DGQLLNDI VGF+KA D SRAL FL++ Q  GLSPKTATLV VI
Sbjct: 245  LLQKLYGEIECDRIEVDGQLLNDIIVGFAKANDPSRALKFLAMAQAIGLSPKTATLVAVI 304

Query: 966  SQLGNSGRTXXXXXXXXXXXEGGLKPRTRAYNALLKGYVKTGALRDAEDVVSEMERGGVA 787
              LG  GR              GLKPRTRAYNALLKGYVK+G+L+DAE VVSEMER GV+
Sbjct: 305  YSLGCCGRIAEAEAVFEEMKGSGLKPRTRAYNALLKGYVKSGSLKDAELVVSEMERSGVS 364

Query: 786  PDEHTYGLLIDAYGNAGRWESARIVLKEMEANNVQPNSHVFSRILASYRDRGEWQRSFQV 607
            PDEHTY LLIDAY NAGRWESARIVLKEMEANNV+PNS V+SRILASYR++GEWQRSFQV
Sbjct: 365  PDEHTYSLLIDAYSNAGRWESARIVLKEMEANNVKPNSFVYSRILASYRNKGEWQRSFQV 424

Query: 606  LKEMKNNGVTPGRKFYNVMIDTFGKYNCLHHAMDTFERMKLEGIEPDTVTWNTLIDSHCK 427
            LKEMK+NG+ P R FYNVMIDTFGKYNCL HAM TF+RM  EGIEPDTVTWNTLID HCK
Sbjct: 425  LKEMKSNGIQPDRHFYNVMIDTFGKYNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCK 484

Query: 426  HGHHNKAEELFVAMQTSGCLPCTTTYNIMINSFGEQERWEDVKDLLGKMQSQGLLHNVVT 247
             G H++AE+LF  M+  G  PCTTTYNIMINS GEQERW+DVK LLGKMQ +GLL N+VT
Sbjct: 485  AGWHDRAEQLFEEMKEKGYSPCTTTYNIMINSLGEQERWDDVKSLLGKMQGEGLLPNIVT 544

Query: 246  YTTLVDIYGQSGRFTDAIECFEVMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMR 67
            YTTLVDIYG+SGRF+DAIEC E+MKS GLKPSSTMYNALINAYAQRGLSEQA+NA RVM 
Sbjct: 545  YTTLVDIYGKSGRFSDAIECLELMKSAGLKPSSTMYNALINAYAQRGLSEQAMNALRVMG 604

Query: 66   GEGLKPSLLALNSLINAFSEDR 1
             +GLKP+LLALNSLINAF EDR
Sbjct: 605  ADGLKPNLLALNSLINAFGEDR 626



 Score =  107 bits (266), Expect = 5e-20
 Identities = 78/317 (24%), Positives = 137/317 (43%), Gaps = 5/317 (1%)
 Frame = -3

Query: 1401 ELLYSILIHALGRSDKLYEAFLFSQRQRLTPL-----TYNALIGACARNDDLEKALNLMA 1237
            E  YS+LI A   + +   A +  +      +      Y+ ++ +     + +++  ++ 
Sbjct: 367  EHTYSLLIDAYSNAGRWESARIVLKEMEANNVKPNSFVYSRILASYRNKGEWQRSFQVLK 426

Query: 1236 RMRRDGYQSDIVNYSLIIQSLLRNNSIDSTVLEKLYDEIEADRIELDGQLLNDITVGFSK 1057
             M+ +G Q D   Y+++I +  + N +D  +    +D + ++ IE D    N +     K
Sbjct: 427  EMKSNGIQPDRHFYNVMIDTFGKYNCLDHAMAT--FDRMLSEGIEPDTVTWNTLIDCHCK 484

Query: 1056 AGDVSRALYFLSVIQGNGLSPKTATLVVVISQLGNSGRTXXXXXXXXXXXEGGLKPRTRA 877
            AG   RA      ++  G SP T T  ++I+ LG   R              GL P    
Sbjct: 485  AGWHDRAEQLFEEMKEKGYSPCTTTYNIMINSLGEQERWDDVKSLLGKMQGEGLLPNIVT 544

Query: 876  YNALLKGYVKTGALRDAEDVVSEMERGGVAPDEHTYGLLIDAYGNAGRWESARIVLKEME 697
            Y  L+  Y K+G   DA + +  M+  G+ P    Y  LI+AY   G  E A   L+ M 
Sbjct: 545  YTTLVDIYGKSGRFSDAIECLELMKSAGLKPSSTMYNALINAYAQRGLSEQAMNALRVMG 604

Query: 696  ANNVQPNSHVFSRILASYRDRGEWQRSFQVLKEMKNNGVTPGRKFYNVMIDTFGKYNCLH 517
            A+ ++PN    + ++ ++ +      +F VL+ MK NGV P    Y  ++    + +  H
Sbjct: 605  ADGLKPNLLALNSLINAFGEDRRDVEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFH 664

Query: 516  HAMDTFERMKLEGIEPD 466
                 +E M L G  PD
Sbjct: 665  KVPAVYEEMILSGCTPD 681



 Score = 81.3 bits (199), Expect = 3e-12
 Identities = 64/248 (25%), Positives = 112/248 (45%), Gaps = 2/248 (0%)
 Frame = -3

Query: 1302 YNALIGACARNDDLEKALNLMARMRRDGYQSDIVNYSLIIQSLLRNNSIDSTVLEKLYDE 1123
            YN +I    + + L+ A+    RM  +G + D V ++ +I    +    D    E+L++E
Sbjct: 440  YNVMIDTFGKYNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCKAGWHDRA--EQLFEE 497

Query: 1122 IEADRIELDGQLLNDI--TVGFSKAGDVSRALYFLSVIQGNGLSPKTATLVVVISQLGNS 949
            ++           N +  ++G  +  D  ++L  L  +QG GL P   T   ++   G S
Sbjct: 498  MKEKGYSPCTTTYNIMINSLGEQERWDDVKSL--LGKMQGEGLLPNIVTYTTLVDIYGKS 555

Query: 948  GRTXXXXXXXXXXXEGGLKPRTRAYNALLKGYVKTGALRDAEDVVSEMERGGVAPDEHTY 769
            GR              GLKP +  YNAL+  Y + G    A + +  M   G+ P+    
Sbjct: 556  GRFSDAIECLELMKSAGLKPSSTMYNALINAYAQRGLSEQAMNALRVMGADGLKPNLLAL 615

Query: 768  GLLIDAYGNAGRWESARIVLKEMEANNVQPNSHVFSRILASYRDRGEWQRSFQVLKEMKN 589
              LI+A+G   R   A  VL+ M+ N V+P+   ++ ++ +     ++ +   V +EM  
Sbjct: 616  NSLINAFGEDRRDVEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFHKVPAVYEEMIL 675

Query: 588  NGVTPGRK 565
            +G TP RK
Sbjct: 676  SGCTPDRK 683



 Score = 63.2 bits (152), Expect = 9e-07
 Identities = 57/258 (22%), Positives = 110/258 (42%), Gaps = 7/258 (2%)
 Frame = -3

Query: 1392 YSILIHALGRSDKLYEAFLFSQRQRLTPLTYNALIGACARNDDLEKALNLMARMRRDGYQ 1213
            Y+ L HA+   D++      S+      +T+N LI    +    ++A  L   M+  GY 
Sbjct: 450  YNCLDHAMATFDRM-----LSEGIEPDTVTWNTLIDCHCKAGWHDRAEQLFEEMKEKGYS 504

Query: 1212 SDIVNYSLIIQSLLRNNSIDSTVLEKLYDEIEA--DRIELDGQLLNDITVG-----FSKA 1054
                 Y+++I SL           ++ +D++++   +++ +G L N +T       + K+
Sbjct: 505  PCTTTYNIMINSLGE---------QERWDDVKSLLGKMQGEGLLPNIVTYTTLVDIYGKS 555

Query: 1053 GDVSRALYFLSVIQGNGLSPKTATLVVVISQLGNSGRTXXXXXXXXXXXEGGLKPRTRAY 874
            G  S A+  L +++  GL P +     +I+     G +             GLKP   A 
Sbjct: 556  GRFSDAIECLELMKSAGLKPSSTMYNALINAYAQRGLSEQAMNALRVMGADGLKPNLLAL 615

Query: 873  NALLKGYVKTGALRDAEDVVSEMERGGVAPDEHTYGLLIDAYGNAGRWESARIVLKEMEA 694
            N+L+  + +     +A  V+  M+  GV PD  TY  L+ A     ++     V +EM  
Sbjct: 616  NSLINAFGEDRRDVEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFHKVPAVYEEMIL 675

Query: 693  NNVQPNSHVFSRILASYR 640
            +   P+    + + ++ R
Sbjct: 676  SGCTPDRKARAMLRSALR 693


>ref|XP_007018011.1| Pentatricopeptide repeat (PPR-like) superfamily protein isoform 2,
            partial [Theobroma cacao] gi|508723339|gb|EOY15236.1|
            Pentatricopeptide repeat (PPR-like) superfamily protein
            isoform 2, partial [Theobroma cacao]
          Length = 698

 Score =  811 bits (2094), Expect = 0.0
 Identities = 415/562 (73%), Positives = 463/562 (82%), Gaps = 7/562 (1%)
 Frame = -3

Query: 1665 VASLSNRRYDFSLLLQFLSTHT--PDHSSNSADSPTQLHPAELRLAESYRAVPAPLWHXX 1492
            V S+  RRYDF+ LL +LS+    PD  S+SA SPT L P E +LAESYRAVPAPLWH  
Sbjct: 63   VLSIHKRRYDFTPLLNYLSSSNSEPDSDSDSA-SPTSLDPIEFQLAESYRAVPAPLWHSL 121

Query: 1491 XXXXXXXXXXXST-----AYALVTWLQKHNLCFSYELLYSILIHALGRSDKLYEAFLFSQ 1327
                       S+     AYA+V+WLQ+HNLCFSYELLYSILIHALGRS+KLYEAFL SQ
Sbjct: 122  LKSMCSSSSSSSSSSINLAYAVVSWLQRHNLCFSYELLYSILIHALGRSEKLYEAFLLSQ 181

Query: 1326 RQRLTPLTYNALIGACARNDDLEKALNLMARMRRDGYQSDIVNYSLIIQSLLRNNSIDST 1147
            RQ LTPLTYNALI ACARN+DLEKALNLM+RMR+DGYQSD VNYSLIIQSL R+N IDS+
Sbjct: 182  RQTLTPLTYNALINACARNNDLEKALNLMSRMRQDGYQSDFVNYSLIIQSLTRSNKIDSS 241

Query: 1146 VLEKLYDEIEADRIELDGQLLNDITVGFSKAGDVSRALYFLSVIQGNGLSPKTATLVVVI 967
            +L+KLY EIE D+IE+DGQLLNDI VGF+KA D S AL FL++ Q  GL+PKTATLV VI
Sbjct: 242  LLQKLYGEIECDKIEVDGQLLNDIIVGFAKANDPSHALKFLAMAQAIGLNPKTATLVAVI 301

Query: 966  SQLGNSGRTXXXXXXXXXXXEGGLKPRTRAYNALLKGYVKTGALRDAEDVVSEMERGGVA 787
              LG  GR              GLKPRTRAYNALLKGYVK G+L+DAE VVSEMER GV+
Sbjct: 302  YSLGCCGRIAEAEAVFEEMKGTGLKPRTRAYNALLKGYVKAGSLKDAELVVSEMERSGVS 361

Query: 786  PDEHTYGLLIDAYGNAGRWESARIVLKEMEANNVQPNSHVFSRILASYRDRGEWQRSFQV 607
            PDEHTY LLIDAY NAGRWESARIVLKEMEANNVQPNS V+SRILASYR++GEWQRSFQV
Sbjct: 362  PDEHTYSLLIDAYANAGRWESARIVLKEMEANNVQPNSFVYSRILASYRNKGEWQRSFQV 421

Query: 606  LKEMKNNGVTPGRKFYNVMIDTFGKYNCLHHAMDTFERMKLEGIEPDTVTWNTLIDSHCK 427
            L+EMK+NG+ P R FYNVMIDTFGKYNCL HAMDTF+RM  EGI+PDTVTWNTLID HCK
Sbjct: 422  LREMKSNGIQPDRHFYNVMIDTFGKYNCLDHAMDTFDRMLSEGIKPDTVTWNTLIDCHCK 481

Query: 426  HGHHNKAEELFVAMQTSGCLPCTTTYNIMINSFGEQERWEDVKDLLGKMQSQGLLHNVVT 247
             G H +AEELF  M+ SG  PCTTTYNIMINSFG QERW++VK LLGKMQSQGLL N+VT
Sbjct: 482  AGRHGRAEELFEEMKESGYSPCTTTYNIMINSFGGQERWDNVKSLLGKMQSQGLLPNIVT 541

Query: 246  YTTLVDIYGQSGRFTDAIECFEVMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMR 67
            YTTLVDIYG+SGRF+DA+EC E+MKS GLKPS TMYNALINAYAQRGLSEQA+NA R+MR
Sbjct: 542  YTTLVDIYGKSGRFSDAMECLELMKSAGLKPSLTMYNALINAYAQRGLSEQAINALRIMR 601

Query: 66   GEGLKPSLLALNSLINAFSEDR 1
             +GLKP+LLALNSLINAF EDR
Sbjct: 602  ADGLKPNLLALNSLINAFGEDR 623



 Score =  101 bits (251), Expect = 3e-18
 Identities = 75/317 (23%), Positives = 137/317 (43%), Gaps = 5/317 (1%)
 Frame = -3

Query: 1401 ELLYSILIHALGRSDKLYEAFLFSQRQRLTPL-----TYNALIGACARNDDLEKALNLMA 1237
            E  YS+LI A   + +   A +  +      +      Y+ ++ +     + +++  ++ 
Sbjct: 364  EHTYSLLIDAYANAGRWESARIVLKEMEANNVQPNSFVYSRILASYRNKGEWQRSFQVLR 423

Query: 1236 RMRRDGYQSDIVNYSLIIQSLLRNNSIDSTVLEKLYDEIEADRIELDGQLLNDITVGFSK 1057
             M+ +G Q D   Y+++I +  + N +D  +    +D + ++ I+ D    N +     K
Sbjct: 424  EMKSNGIQPDRHFYNVMIDTFGKYNCLDHAM--DTFDRMLSEGIKPDTVTWNTLIDCHCK 481

Query: 1056 AGDVSRALYFLSVIQGNGLSPKTATLVVVISQLGNSGRTXXXXXXXXXXXEGGLKPRTRA 877
            AG   RA      ++ +G SP T T  ++I+  G   R              GL P    
Sbjct: 482  AGRHGRAEELFEEMKESGYSPCTTTYNIMINSFGGQERWDNVKSLLGKMQSQGLLPNIVT 541

Query: 876  YNALLKGYVKTGALRDAEDVVSEMERGGVAPDEHTYGLLIDAYGNAGRWESARIVLKEME 697
            Y  L+  Y K+G   DA + +  M+  G+ P    Y  LI+AY   G  E A   L+ M 
Sbjct: 542  YTTLVDIYGKSGRFSDAMECLELMKSAGLKPSLTMYNALINAYAQRGLSEQAINALRIMR 601

Query: 696  ANNVQPNSHVFSRILASYRDRGEWQRSFQVLKEMKNNGVTPGRKFYNVMIDTFGKYNCLH 517
            A+ ++PN    + ++ ++ +      +F VL+ MK N V P    Y  ++ +  + +  H
Sbjct: 602  ADGLKPNLLALNSLINAFGEDRRDVEAFAVLQYMKENDVKPDVVTYTTLMKSLIRVDKFH 661

Query: 516  HAMDTFERMKLEGIEPD 466
                 +E M L G  PD
Sbjct: 662  KVPAVYEEMILSGCTPD 678



 Score = 80.1 bits (196), Expect = 7e-12
 Identities = 61/246 (24%), Positives = 104/246 (42%)
 Frame = -3

Query: 1302 YNALIGACARNDDLEKALNLMARMRRDGYQSDIVNYSLIIQSLLRNNSIDSTVLEKLYDE 1123
            YN +I    + + L+ A++   RM  +G + D V ++ +I    +         E+L++E
Sbjct: 437  YNVMIDTFGKYNCLDHAMDTFDRMLSEGIKPDTVTWNTLIDCHCKAGRHGRA--EELFEE 494

Query: 1122 IEADRIELDGQLLNDITVGFSKAGDVSRALYFLSVIQGNGLSPKTATLVVVISQLGNSGR 943
            ++           N +   F            L  +Q  GL P   T   ++   G SGR
Sbjct: 495  MKESGYSPCTTTYNIMINSFGGQERWDNVKSLLGKMQSQGLLPNIVTYTTLVDIYGKSGR 554

Query: 942  TXXXXXXXXXXXEGGLKPRTRAYNALLKGYVKTGALRDAEDVVSEMERGGVAPDEHTYGL 763
                          GLKP    YNAL+  Y + G    A + +  M   G+ P+      
Sbjct: 555  FSDAMECLELMKSAGLKPSLTMYNALINAYAQRGLSEQAINALRIMRADGLKPNLLALNS 614

Query: 762  LIDAYGNAGRWESARIVLKEMEANNVQPNSHVFSRILASYRDRGEWQRSFQVLKEMKNNG 583
            LI+A+G   R   A  VL+ M+ N+V+P+   ++ ++ S     ++ +   V +EM  +G
Sbjct: 615  LINAFGEDRRDVEAFAVLQYMKENDVKPDVVTYTTLMKSLIRVDKFHKVPAVYEEMILSG 674

Query: 582  VTPGRK 565
             TP RK
Sbjct: 675  CTPDRK 680