BLASTX nr result
ID: Gardenia21_contig00004824
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Gardenia21_contig00004824
(403 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDO97739.1| unnamed protein product [Coffea canephora] 83 7e-14
ref|XP_010655264.1| PREDICTED: mediator of RNA polymerase II tra... 68 2e-09
ref|XP_010655263.1| PREDICTED: mediator of RNA polymerase II tra... 68 2e-09
ref|XP_010655262.1| PREDICTED: mediator of RNA polymerase II tra... 68 2e-09
ref|XP_011072768.1| PREDICTED: mediator of RNA polymerase II tra... 62 1e-07
emb|CAN68936.1| hypothetical protein VITISV_042323 [Vitis vinifera] 60 8e-07
ref|XP_004296540.1| PREDICTED: mediator of RNA polymerase II tra... 57 5e-06
gb|KDO43971.1| hypothetical protein CISIN_1g008451mg [Citrus sin... 57 7e-06
gb|KDO43970.1| hypothetical protein CISIN_1g008451mg [Citrus sin... 57 7e-06
gb|KDO43969.1| hypothetical protein CISIN_1g008451mg [Citrus sin... 57 7e-06
ref|XP_006427784.1| hypothetical protein CICLE_v10025265mg [Citr... 57 7e-06
ref|XP_006427783.1| hypothetical protein CICLE_v10025265mg [Citr... 57 7e-06
>emb|CDO97739.1| unnamed protein product [Coffea canephora]
Length = 576
Score = 83.2 bits (204), Expect = 7e-14
Identities = 40/47 (85%), Positives = 40/47 (85%)
Frame = -3
Query: 401 FGMGATNPGSMMSIXXXXXQHGSQGAFGNMQQNMQNLQPGMVPLQNT 261
FGMG TNPGSMM I QHGSQGAFGNMQQNMQNLQPGMVPLQNT
Sbjct: 514 FGMGTTNPGSMMPIQQQQQQHGSQGAFGNMQQNMQNLQPGMVPLQNT 560
>ref|XP_010655264.1| PREDICTED: mediator of RNA polymerase II transcription subunit 8
isoform X3 [Vitis vinifera]
Length = 552
Score = 68.2 bits (165), Expect = 2e-09
Identities = 33/46 (71%), Positives = 34/46 (73%)
Frame = -3
Query: 401 FGMGATNPGSMMSIXXXXXQHGSQGAFGNMQQNMQNLQPGMVPLQN 264
F MGA NPG MM + QHGSQGAFGNMQ N QNLQPGMV LQN
Sbjct: 490 FNMGAANPGGMMPMQQQQQQHGSQGAFGNMQPNAQNLQPGMVALQN 535
>ref|XP_010655263.1| PREDICTED: mediator of RNA polymerase II transcription subunit 8
isoform X2 [Vitis vinifera]
Length = 553
Score = 68.2 bits (165), Expect = 2e-09
Identities = 33/46 (71%), Positives = 34/46 (73%)
Frame = -3
Query: 401 FGMGATNPGSMMSIXXXXXQHGSQGAFGNMQQNMQNLQPGMVPLQN 264
F MGA NPG MM + QHGSQGAFGNMQ N QNLQPGMV LQN
Sbjct: 491 FNMGAANPGGMMPMQQQQQQHGSQGAFGNMQPNAQNLQPGMVALQN 536
>ref|XP_010655262.1| PREDICTED: mediator of RNA polymerase II transcription subunit 8
isoform X1 [Vitis vinifera] gi|297735745|emb|CBI18432.3|
unnamed protein product [Vitis vinifera]
Length = 558
Score = 68.2 bits (165), Expect = 2e-09
Identities = 33/46 (71%), Positives = 34/46 (73%)
Frame = -3
Query: 401 FGMGATNPGSMMSIXXXXXQHGSQGAFGNMQQNMQNLQPGMVPLQN 264
F MGA NPG MM + QHGSQGAFGNMQ N QNLQPGMV LQN
Sbjct: 496 FNMGAANPGGMMPMQQQQQQHGSQGAFGNMQPNAQNLQPGMVALQN 541
>ref|XP_011072768.1| PREDICTED: mediator of RNA polymerase II transcription subunit 8
[Sesamum indicum]
Length = 554
Score = 62.4 bits (150), Expect = 1e-07
Identities = 30/47 (63%), Positives = 34/47 (72%)
Frame = -3
Query: 401 FGMGATNPGSMMSIXXXXXQHGSQGAFGNMQQNMQNLQPGMVPLQNT 261
F MG TN GSMM I HG+QG FGNM Q+ QNLQPGM+P+QNT
Sbjct: 493 FNMGTTNAGSMMPIQQQQQ-HGTQGTFGNMPQSAQNLQPGMLPMQNT 538
>emb|CAN68936.1| hypothetical protein VITISV_042323 [Vitis vinifera]
Length = 155
Score = 59.7 bits (143), Expect = 8e-07
Identities = 31/58 (53%), Positives = 34/58 (58%)
Frame = +2
Query: 209 FTAGFAVFVVENWDDFAVYSGEAPFQAVDSACSVACFQKHLVNHAVAAVAG*TSYFQD 382
FTA FAV V NWDD SG P Q VDS VAC++ HLV+HA A A SY D
Sbjct: 93 FTADFAVSVAGNWDDSESRSGGLPCQVVDSEHLVACYRMHLVSHAAAVAAAWASYHPD 150
>ref|XP_004296540.1| PREDICTED: mediator of RNA polymerase II transcription subunit 8
[Fragaria vesca subsp. vesca]
Length = 560
Score = 57.0 bits (136), Expect = 5e-06
Identities = 31/48 (64%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = -3
Query: 401 FGMGATNPGSMMSIXXXXXQ-HGSQGAFGNMQQNMQNLQPGMVPLQNT 261
F MGATN G MM + Q HGSQGAFGNM QN QNLQ MV LQ T
Sbjct: 496 FNMGATNTGGMMPLQQQQQQQHGSQGAFGNMTQNAQNLQSNMVQLQGT 543
>gb|KDO43971.1| hypothetical protein CISIN_1g008451mg [Citrus sinensis]
Length = 565
Score = 56.6 bits (135), Expect = 7e-06
Identities = 31/50 (62%), Positives = 33/50 (66%), Gaps = 4/50 (8%)
Frame = -3
Query: 401 FGMGATNPGSMMSIXXXXXQ----HGSQGAFGNMQQNMQNLQPGMVPLQN 264
F MGA+NPGSMM I Q H +QGAFGNMQ N QNLQ MV LQN
Sbjct: 499 FNMGASNPGSMMPIQQQQQQQQQQHNTQGAFGNMQPNAQNLQSNMVALQN 548
>gb|KDO43970.1| hypothetical protein CISIN_1g008451mg [Citrus sinensis]
Length = 563
Score = 56.6 bits (135), Expect = 7e-06
Identities = 31/50 (62%), Positives = 33/50 (66%), Gaps = 4/50 (8%)
Frame = -3
Query: 401 FGMGATNPGSMMSIXXXXXQ----HGSQGAFGNMQQNMQNLQPGMVPLQN 264
F MGA+NPGSMM I Q H +QGAFGNMQ N QNLQ MV LQN
Sbjct: 497 FNMGASNPGSMMPIQQQQQQQQQQHNTQGAFGNMQPNAQNLQSNMVALQN 546
>gb|KDO43969.1| hypothetical protein CISIN_1g008451mg [Citrus sinensis]
Length = 560
Score = 56.6 bits (135), Expect = 7e-06
Identities = 31/50 (62%), Positives = 33/50 (66%), Gaps = 4/50 (8%)
Frame = -3
Query: 401 FGMGATNPGSMMSIXXXXXQ----HGSQGAFGNMQQNMQNLQPGMVPLQN 264
F MGA+NPGSMM I Q H +QGAFGNMQ N QNLQ MV LQN
Sbjct: 494 FNMGASNPGSMMPIQQQQQQQQQQHNTQGAFGNMQPNAQNLQSNMVALQN 543
>ref|XP_006427784.1| hypothetical protein CICLE_v10025265mg [Citrus clementina]
gi|557529774|gb|ESR41024.1| hypothetical protein
CICLE_v10025265mg [Citrus clementina]
Length = 572
Score = 56.6 bits (135), Expect = 7e-06
Identities = 31/50 (62%), Positives = 33/50 (66%), Gaps = 4/50 (8%)
Frame = -3
Query: 401 FGMGATNPGSMMSIXXXXXQ----HGSQGAFGNMQQNMQNLQPGMVPLQN 264
F MGA+NPGSMM I Q H +QGAFGNMQ N QNLQ MV LQN
Sbjct: 506 FNMGASNPGSMMPIQQQQQQQQQQHNTQGAFGNMQPNAQNLQSNMVALQN 555
>ref|XP_006427783.1| hypothetical protein CICLE_v10025265mg [Citrus clementina]
gi|557529773|gb|ESR41023.1| hypothetical protein
CICLE_v10025265mg [Citrus clementina]
Length = 570
Score = 56.6 bits (135), Expect = 7e-06
Identities = 31/50 (62%), Positives = 33/50 (66%), Gaps = 4/50 (8%)
Frame = -3
Query: 401 FGMGATNPGSMMSIXXXXXQ----HGSQGAFGNMQQNMQNLQPGMVPLQN 264
F MGA+NPGSMM I Q H +QGAFGNMQ N QNLQ MV LQN
Sbjct: 504 FNMGASNPGSMMPIQQQQQQQQQQHNTQGAFGNMQPNAQNLQSNMVALQN 553