BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00004610
         (1842 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP00585.1| unnamed protein product [Coffea canephora]            655   0.0  
ref|XP_009771929.1| PREDICTED: mediator of RNA polymerase II tra...   539   e-150
ref|XP_002278845.1| PREDICTED: mediator of RNA polymerase II tra...   529   e-147
ref|XP_011077190.1| PREDICTED: mediator of RNA polymerase II tra...   524   e-145
ref|XP_006354095.1| PREDICTED: mediator of RNA polymerase II tra...   524   e-145
ref|XP_011070829.1| PREDICTED: mediator of RNA polymerase II tra...   518   e-144
emb|CBI27055.3| unnamed protein product [Vitis vinifera]              497   e-137
ref|XP_012478637.1| PREDICTED: mediator of RNA polymerase II tra...   495   e-137
ref|XP_012478635.1| PREDICTED: mediator of RNA polymerase II tra...   495   e-137
ref|XP_012478636.1| PREDICTED: mediator of RNA polymerase II tra...   495   e-137
gb|KHG24986.1| Mediator of RNA polymerase II transcription subun...   493   e-136
ref|XP_012082045.1| PREDICTED: mediator of RNA polymerase II tra...   492   e-136
ref|XP_012082044.1| PREDICTED: mediator of RNA polymerase II tra...   492   e-136
gb|KDO70070.1| hypothetical protein CISIN_1g003284mg [Citrus sin...   492   e-136
gb|KDO70069.1| hypothetical protein CISIN_1g003284mg [Citrus sin...   492   e-136
gb|KDO70068.1| hypothetical protein CISIN_1g003284mg [Citrus sin...   492   e-136
ref|XP_007046291.1| Phytochrome and flowering time regulatory pr...   491   e-135
ref|XP_006484420.1| PREDICTED: mediator of RNA polymerase II tra...   489   e-135
ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citr...   489   e-135
ref|XP_007046292.1| Phytochrome and flowering time regulatory pr...   488   e-134

>emb|CDP00585.1| unnamed protein product [Coffea canephora]
          Length = 835

 Score =  655 bits (1689), Expect = 0.0
 Identities = 351/453 (77%), Positives = 358/453 (79%)
 Frame = -2

Query: 1841 IEACAALSRSGMTNLSTQXXXXXXXXXXXXXXXXXXXXVQSANTGAVMNRQPGSVGTIPP 1662
            IEA  AL RSGMTN+STQ                    VQSAN GAV+NRQPGSVGTIPP
Sbjct: 235  IEARVALGRSGMTNISTQSPVKVDAASVASVSGPPSTSVQSANAGAVVNRQPGSVGTIPP 294

Query: 1661 AIVKIEPTTVTSMSGPTFPHIPSVPRASSQPIPNLQTSSPISASQDMVSTNENIQEMKPI 1482
            A+VKIEPTTVTSMSGPTFPH+PSVPRASSQPIPNLQTSSPISASQDMVSTNENIQEMKPI
Sbjct: 295  AVVKIEPTTVTSMSGPTFPHVPSVPRASSQPIPNLQTSSPISASQDMVSTNENIQEMKPI 354

Query: 1481 VSSMAQSLRPVGAAPANVRILNDVAQRQALAGGTSSMGLQSMGGTPILSNMISSGMTSSV 1302
            VSSM QSLRPVGAAPANVRILNDVAQ +   GG +SMGLQSMGGTPILSNMISSGMTSS+
Sbjct: 355  VSSMTQSLRPVGAAPANVRILNDVAQARQAFGGGTSMGLQSMGGTPILSNMISSGMTSSI 414

Query: 1301 PAAQTLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPLSNL 1122
            PAAQTLI                                              SQPLSN 
Sbjct: 415  PAAQTLISSGQSGVTSVSGSAPVAGNAQGAQNPAPASFPTTTSNVSGSSNLSMSQPLSNH 474

Query: 1121 QGGVSMGQTVPSMSQGNLAGTQMVQSGMAMNQNMMXXXXXXXXXXXXATMIPTPGMSQQV 942
            QGGVSMGQTVPSMSQGNL GTQMVQSGM MNQNMM             TMIPTPGMSQQV
Sbjct: 475  QGGVSMGQTVPSMSQGNLTGTQMVQSGMTMNQNMMGGIGASGIPSGTGTMIPTPGMSQQV 534

Query: 941  QPGMQPLGVNNNVGANMPLPQQTSNTLQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYR 762
            QPGMQPLGVNNN GANMPLPQQTSNTL SAQSKYVKVWEGNLSGQRQGQPVFITRLEGYR
Sbjct: 535  QPGMQPLGVNNNAGANMPLPQQTSNTLPSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYR 594

Query: 761  SASASETLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCA 582
            SASASETLAANWP TMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCA
Sbjct: 595  SASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCA 654

Query: 581  VIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK 483
            VIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK
Sbjct: 655  VIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK 687



 Score = 87.0 bits (214), Expect = 5e-14
 Identities = 40/40 (100%), Positives = 40/40 (100%)
 Frame = -2

Query: 131 MVGTGLGQPYMQGPGRSPLMSQGQVSSQGPPTMSGGPFMS 12
           MVGTGLGQPYMQGPGRSPLMSQGQVSSQGPPTMSGGPFMS
Sbjct: 796 MVGTGLGQPYMQGPGRSPLMSQGQVSSQGPPTMSGGPFMS 835


>ref|XP_009771929.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like [Nicotiana sylvestris]
          Length = 828

 Score =  539 bits (1389), Expect = e-150
 Identities = 304/456 (66%), Positives = 329/456 (72%), Gaps = 3/456 (0%)
 Frame = -2

Query: 1841 IEACAALSRSGMTNLSTQXXXXXXXXXXXXXXXXXXXXVQSANTGAVMNRQPGSVGTIPP 1662
            IEA AA SRSGMTNL++                       SA  G+VM+RQP S G IPP
Sbjct: 229  IEARAAFSRSGMTNLTSNQTPIKMDVPSIPPVSVPPSISNSAANGSVMSRQPISAGNIPP 288

Query: 1661 AIVKIEPTTVTSMSGPTFPHIPSVPRASSQPIPNLQTSSPISASQDMVSTNENIQEMKPI 1482
            A VKIEPTTVTSM+GP F HIPSV R + QP+P+LQTSSP+S SQ+M S NEN+QEMKPI
Sbjct: 289  ATVKIEPTTVTSMNGPAFSHIPSV-RPALQPVPSLQTSSPLSVSQEMASHNENVQEMKPI 347

Query: 1481 VSSMAQSLRPVGAAPANVRILNDVAQ-RQALAGGTSSMGLQSMGGTPILSNMISSGMTSS 1305
            VS M QSLRPV AA ANVRILNDVAQ RQA+AG TS +GLQSMGGTP+LS+MISSGM SS
Sbjct: 348  VSGMTQSLRPVAAAAANVRILNDVAQARQAIAGATS-IGLQSMGGTPMLSSMISSGMASS 406

Query: 1304 VPAAQTLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPLSN 1125
            VP+AQT+                                               SQPLSN
Sbjct: 407  VPSAQTVFSSGQSGVTTVSGSVPLSGSGQNTQNSAPASFTSTAPSMSGNPNISISQPLSN 466

Query: 1124 LQGGVSM-GQTVPSMSQGNLAGTQMVQSGMAMNQNMMXXXXXXXXXXXXATMIPTPGMSQ 948
             QGG+SM GQTVP M QGNL GTQM+ SG  MNQNM+             TM+PTPG+SQ
Sbjct: 467  NQGGISMAGQTVPGMCQGNLPGTQMMPSGTGMNQNMLTGLGATGMPSGTGTMMPTPGISQ 526

Query: 947  QVQPGMQPLGVNNNVGANMPLPQQ-TSNTLQSAQSKYVKVWEGNLSGQRQGQPVFITRLE 771
            Q QPGMQP+G  N+ GANMPL QQ T   L SAQSKYVKVWEGNLSGQRQGQPVFITRLE
Sbjct: 527  QGQPGMQPVG--NSTGANMPLSQQQTPAALPSAQSKYVKVWEGNLSGQRQGQPVFITRLE 584

Query: 770  GYRSASASETLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKK 591
            GYRSASASE+LAANWP TMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFL QLQEKK
Sbjct: 585  GYRSASASESLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLSQLQEKK 644

Query: 590  LCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK 483
            LCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK
Sbjct: 645  LCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK 680



 Score = 62.4 bits (150), Expect = 1e-06
 Identities = 30/40 (75%), Positives = 32/40 (80%)
 Frame = -2

Query: 131 MVGTGLGQPYMQGPGRSPLMSQGQVSSQGPPTMSGGPFMS 12
           MVGTG+ Q YMQGP RS LMSQGQVSSQG PTM G  FM+
Sbjct: 789 MVGTGVNQAYMQGPARSQLMSQGQVSSQGLPTMPGSGFMN 828


>ref|XP_002278845.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            [Vitis vinifera]
          Length = 827

 Score =  529 bits (1363), Expect = e-147
 Identities = 296/464 (63%), Positives = 333/464 (71%), Gaps = 11/464 (2%)
 Frame = -2

Query: 1841 IEACAALSRSGMTNLST-QXXXXXXXXXXXXXXXXXXXXVQSANTGAVMNRQPGSVGTIP 1665
            +EA AALSR G++N++  Q                    + S N   +MNR   +VG +P
Sbjct: 229  MEARAALSRPGLSNMTANQSPVKMDIASVPQVSAAPPASIPSVN--GIMNRPTIAVGAVP 286

Query: 1664 PAIVKIEPTTVTSM-SGPTFPHIPSVPRASSQPIPNLQTSSPISASQDMVSTNENIQEMK 1488
             A VK+EP+TVTS+ SGP FPHIPSVPRA+SQ +P+LQTSSP S SQ+M+S  +N+Q++K
Sbjct: 287  TATVKVEPSTVTSITSGPGFPHIPSVPRAASQGVPSLQTSSPSSTSQEMISNGDNVQDLK 346

Query: 1487 PIVSSMAQSLRPVGAAPANVRILNDVAQRQ------ALAGGTSSMGLQSMGGTPI---LS 1335
            PIVS ++Q+LRPV  A ANV ILN+++Q +      AL+GGTS +GLQSMGGT +   +S
Sbjct: 347  PIVSGISQTLRPVVPAAANVSILNNLSQARQVMHSAALSGGTS-IGLQSMGGTSMAMHMS 405

Query: 1334 NMISSGMTSSVPAAQTLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1155
            NMISSGM SSVPA QT+                                           
Sbjct: 406  NMISSGMASSVPATQTVFSSGQSAVSSITGSGTLAGTAQVAQNSALGSFTSATSNMSVNS 465

Query: 1154 XXXXSQPLSNLQGGVSMGQTVPSMSQGNLAGTQMVQSGMAMNQNMMXXXXXXXXXXXXAT 975
                SQPLSNLQGGVSMGQTVP MSQGNL G QMVQSG+ MNQNMM             T
Sbjct: 466  NLGISQPLSNLQGGVSMGQTVPGMSQGNLPGGQMVQSGIGMNQNMMSGLGPSGISSGTGT 525

Query: 974  MIPTPGMSQQVQPGMQPLGVNNNVGANMPLPQQTSNTLQSAQSKYVKVWEGNLSGQRQGQ 795
            MIPTPGMSQQVQPGM  LGVNNN  ANMPLPQQTS  +Q+AQSKYVKVWEGNLSGQRQGQ
Sbjct: 526  MIPTPGMSQQVQPGMPSLGVNNNAAANMPLPQQTSGAMQTAQSKYVKVWEGNLSGQRQGQ 585

Query: 794  PVFITRLEGYRSASASETLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGF 615
            PVFITRLEGYRSASASE+LAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGF
Sbjct: 586  PVFITRLEGYRSASASESLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGF 645

Query: 614  LGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK 483
            LGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK
Sbjct: 646  LGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK 689


>ref|XP_011077190.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like [Sesamum indicum]
          Length = 806

 Score =  524 bits (1350), Expect = e-145
 Identities = 296/456 (64%), Positives = 327/456 (71%), Gaps = 3/456 (0%)
 Frame = -2

Query: 1841 IEACAALSRSGMTNLSTQXXXXXXXXXXXXXXXXXXXXVQSANTGAVMNRQPGSVG-TIP 1665
            +E  AALSR GM NL +                       ++  G+V+ RQP  VG  IP
Sbjct: 227  MEGLAALSRPGMANLPSNQNPIKMDVTPAPPISGPPPASGASANGSVLGRQPIPVGKNIP 286

Query: 1664 PAIVKIEPTTVTSMSGPTFPHIPSVPRASSQPIPNLQTSSPISASQDMVSTNENIQEMKP 1485
            PA VK+EP TVTS +GP FP I SV RA+SQP+P+LQTSSPIS SQ+MVS+NEN+ +MKP
Sbjct: 287  PATVKVEPITVTSGTGPAFPPISSVSRATSQPVPSLQTSSPISTSQEMVSSNENVHDMKP 346

Query: 1484 IVSSMAQSLRPVGAAPANVRILNDVAQ-RQALAGGTSSMGLQSMGGTPILSNMISSGMTS 1308
             V+SM  SLRPVGA PANVRILNDVAQ RQALAGGTS +GL SMGGTP+LSNMISSGM S
Sbjct: 347  QVTSMTPSLRPVGA-PANVRILNDVAQARQALAGGTS-IGLPSMGGTPMLSNMISSGMAS 404

Query: 1307 SVPAAQTLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPLS 1128
            SVP AQT+I                                              SQ LS
Sbjct: 405  SVPPAQTVISSGSSGVASIAGSLPIPASGQVAQNSSSASFTSTAPTVTGTSSLGMSQSLS 464

Query: 1127 NLQGGVSMGQTVPSMSQGNLAGTQMVQSGMAMNQNMMXXXXXXXXXXXXATMIPTPGMSQ 948
            NLQ   S+GQ++P MSQGNL  TQMVQ+GM+MNQNMM              M+PTPGMSQ
Sbjct: 465  NLQVSGSLGQSLPGMSQGNLPVTQMVQTGMSMNQNMMSGTGTTGMPSGSGNMMPTPGMSQ 524

Query: 947  QVQPGMQPLGVN-NNVGANMPLPQQTSNTLQSAQSKYVKVWEGNLSGQRQGQPVFITRLE 771
            Q+ PGMQP+GVN NN   NMPL QQTS+T+Q AQSKYVKVWEGNLSGQRQGQPVFITRLE
Sbjct: 525  QIPPGMQPVGVNSNNSVTNMPLNQQTSSTIQPAQSKYVKVWEGNLSGQRQGQPVFITRLE 584

Query: 770  GYRSASASETLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKK 591
            GYR+ASASETLAANWP TMQIVRLISQDHMNNKQYVGKADFLVFRAM+QHGFLGQLQEKK
Sbjct: 585  GYRNASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMDQHGFLGQLQEKK 644

Query: 590  LCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK 483
            LCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFK
Sbjct: 645  LCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFK 680



 Score = 66.6 bits (161), Expect = 7e-08
 Identities = 31/40 (77%), Positives = 33/40 (82%)
 Frame = -2

Query: 131 MVGTGLGQPYMQGPGRSPLMSQGQVSSQGPPTMSGGPFMS 12
           MVGTG+ Q YMQG GRSPL+SQGQVSSQG P M GG FMS
Sbjct: 767 MVGTGMNQAYMQGSGRSPLLSQGQVSSQGAPAMPGGTFMS 806


>ref|XP_006354095.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like [Solanum tuberosum]
          Length = 819

 Score =  524 bits (1350), Expect = e-145
 Identities = 294/455 (64%), Positives = 321/455 (70%), Gaps = 2/455 (0%)
 Frame = -2

Query: 1841 IEACAALSRSGMTNLSTQXXXXXXXXXXXXXXXXXXXXVQSANTGAVMNRQPGSVGTIPP 1662
            IEA AA SRSGMTNL++                       SA   +VM+R P S G IPP
Sbjct: 227  IEARAAFSRSGMTNLASNHSPVKMDVSSVLPVSGTQSISNSAANVSVMSRPPISAGNIPP 286

Query: 1661 AIVKIEPTTVTSMSGPTFPHIPSVPRASSQPIPNLQTSSPISASQDMVSTNENIQEMKPI 1482
            A VKIEP TVTSM+GP F HIPSV R + QP+P+LQ SSP+S SQ+M S  EN+QEMKPI
Sbjct: 287  ATVKIEPNTVTSMTGPAFSHIPSV-RPALQPVPSLQASSPLSVSQEMASHTENVQEMKPI 345

Query: 1481 VSSMAQSLRPVGAAPANVRILNDVAQRQALAGGTSSMGLQSMGGTPILSNMISSGMTSSV 1302
            VS M QSLRPV AA ANV+ILN VAQ   + GG +S+GLQSMGGTP+LS+MISSGM SSV
Sbjct: 346  VSGMTQSLRPVAAAAANVKILNGVAQAHQVLGGGTSIGLQSMGGTPMLSSMISSGMASSV 405

Query: 1301 PAAQTLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPLSNL 1122
            PA+Q ++                                              SQPL+N 
Sbjct: 406  PASQAVLSSGQSGVTTMTGAVPLAGSAQNTQNSAPSSFTSTAPSMSGNSNISISQPLNNN 465

Query: 1121 QGGVSM-GQTVPSMSQGNLAGTQMVQSGMAMNQNMMXXXXXXXXXXXXATMIPTPGMSQQ 945
            Q GVSM GQTVP MSQGNL GTQM+ SG  MNQNM+             TM+PTPGMSQQ
Sbjct: 466  QRGVSMTGQTVPGMSQGNLPGTQMMPSGTGMNQNMLTGLGATGLPSGTGTMMPTPGMSQQ 525

Query: 944  VQPGMQPLGVNNNVGANMPLPQQ-TSNTLQSAQSKYVKVWEGNLSGQRQGQPVFITRLEG 768
             QPGMQP+GVN+   ANMPL QQ TS  L SAQSKYVKVWEGNLSGQRQGQPVFITRLEG
Sbjct: 526  GQPGMQPVGVNST-SANMPLSQQQTSAALPSAQSKYVKVWEGNLSGQRQGQPVFITRLEG 584

Query: 767  YRSASASETLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKL 588
            YRSASASE+LAANWP TMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFL QLQEKKL
Sbjct: 585  YRSASASESLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLSQLQEKKL 644

Query: 587  CAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK 483
            CAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK
Sbjct: 645  CAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK 679


>ref|XP_011070829.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like [Sesamum indicum]
          Length = 788

 Score =  518 bits (1333), Expect = e-144
 Identities = 292/456 (64%), Positives = 327/456 (71%), Gaps = 3/456 (0%)
 Frame = -2

Query: 1841 IEACAALSRSGMTNL-STQXXXXXXXXXXXXXXXXXXXXVQSANTGAVMNRQPGSVGTIP 1665
            +EA ++LSRSGMT+L S Q                      SAN  +V+ RQ  SVG I 
Sbjct: 227  VEARSSLSRSGMTSLPSNQNPVKTDVAPVLPISGLPSASAPSANA-SVLVRQQISVGNIA 285

Query: 1664 PAIVKIEPTTVTSMSGPTFPHIPSVPRASSQPIPNLQTSSPISASQDMVSTNENIQEMKP 1485
            PA VK+EP T+TSM+ P FP I SVPRA+SQ +P+LQTSSPIS SQDM+  N N+ ++KP
Sbjct: 286  PATVKVEPITLTSMTAPAFPQIASVPRAASQAVPSLQTSSPISTSQDMIPNNANVPDVKP 345

Query: 1484 IVSSMAQSLRPVGAAPANVRILNDVAQ-RQALAGGTSSMGLQSMGGTPILSNMISSGMTS 1308
             V++MA SLRPVGA PANVRILNDVAQ RQALAGGTS++GL S+GGTP+LSNMISSG+T+
Sbjct: 346  SVTNMAPSLRPVGA-PANVRILNDVAQARQALAGGTSTIGLPSIGGTPMLSNMISSGITT 404

Query: 1307 SVPAAQTLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPLS 1128
            S+P AQT+I                                              SQP S
Sbjct: 405  SIPPAQTVISSGPSGVTSIAGSLPVSATGQVVHNSTPASLISTASNVSGNASLTMSQPSS 464

Query: 1127 NLQGGVSMGQTVPSMSQGNLAGTQMVQSGMAMNQNMMXXXXXXXXXXXXATMIPTPGMSQ 948
             LQG VS+ QT+P MSQGN   TQ+VQ+GM MNQNMM             TMIPT G SQ
Sbjct: 465  TLQGSVSLSQTLPGMSQGNHPVTQIVQTGMNMNQNMMSGSGASGMPSGTGTMIPTLGTSQ 524

Query: 947  QVQPGMQPLGVN-NNVGANMPLPQQTSNTLQSAQSKYVKVWEGNLSGQRQGQPVFITRLE 771
            Q QPGMQP+G+N NN G NMPL QQTS+T+QSAQSKY+KVWEGNLSGQRQGQPVFITRLE
Sbjct: 525  QGQPGMQPVGLNSNNSGTNMPLNQQTSSTVQSAQSKYIKVWEGNLSGQRQGQPVFITRLE 584

Query: 770  GYRSASASETLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKK 591
            GYRSASASETLAANWP  MQIVRLISQDHMNNK YVGKADFLVFRAMNQHGFLGQLQEKK
Sbjct: 585  GYRSASASETLAANWPPIMQIVRLISQDHMNNKHYVGKADFLVFRAMNQHGFLGQLQEKK 644

Query: 590  LCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK 483
            LCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFK
Sbjct: 645  LCAVIQLPSQTLLLSVSDKAHRLIGMLFPGDMVVFK 680


>emb|CBI27055.3| unnamed protein product [Vitis vinifera]
          Length = 815

 Score =  497 bits (1279), Expect = e-137
 Identities = 283/464 (60%), Positives = 321/464 (69%), Gaps = 11/464 (2%)
 Frame = -2

Query: 1841 IEACAALSRSGMTNLST-QXXXXXXXXXXXXXXXXXXXXVQSANTGAVMNRQPGSVGTIP 1665
            +EA AALSR G++N++  Q                    + S N   +MNR   +VG +P
Sbjct: 229  MEARAALSRPGLSNMTANQSPVKMDIASVPQVSAAPPASIPSVN--GIMNRPTIAVGAVP 286

Query: 1664 PAIVKIEPTTVTSM-SGPTFPHIPSVPRASSQPIPNLQTSSPISASQDMVSTNENIQEMK 1488
             A VK+EP+TVTS+ SGP FPHIPSVPRA+SQ +P+LQTSSP S SQ+M+S  +N+Q++K
Sbjct: 287  TATVKVEPSTVTSITSGPGFPHIPSVPRAASQGVPSLQTSSPSSTSQEMISNGDNVQDLK 346

Query: 1487 PIVSSMAQSLRPVGAAPANVRILNDVAQRQ------ALAGGTSSMGLQSMGGTPI---LS 1335
            PIVS ++Q+LRPV  A ANV ILN+++Q +      AL+GGTS +GLQSMGGT +   +S
Sbjct: 347  PIVSGISQTLRPVVPAAANVSILNNLSQARQVMHSAALSGGTS-IGLQSMGGTSMAMHMS 405

Query: 1334 NMISSGMTSSVPAAQTLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1155
            NMISSGM SSVPA QT+                                           
Sbjct: 406  NMISSGMASSVPATQTVFSSGQSAVSSITGSGTLAGTAQVAQNSALGSFTSATSNMSVNS 465

Query: 1154 XXXXSQPLSNLQGGVSMGQTVPSMSQGNLAGTQMVQSGMAMNQNMMXXXXXXXXXXXXAT 975
                SQPL            +P MSQGNL G QMVQSG+ MNQNMM             T
Sbjct: 466  NLGISQPL------------IPGMSQGNLPGGQMVQSGIGMNQNMMSGLGPSGISSGTGT 513

Query: 974  MIPTPGMSQQVQPGMQPLGVNNNVGANMPLPQQTSNTLQSAQSKYVKVWEGNLSGQRQGQ 795
            MIPTPGMSQQVQPGM  LGVNNN  ANMPLPQQTS  +Q+AQSKYVKVWEGNLSGQRQGQ
Sbjct: 514  MIPTPGMSQQVQPGMPSLGVNNNAAANMPLPQQTSGAMQTAQSKYVKVWEGNLSGQRQGQ 573

Query: 794  PVFITRLEGYRSASASETLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGF 615
            PVFITRLEGYRSASASE+LAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGF
Sbjct: 574  PVFITRLEGYRSASASESLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGF 633

Query: 614  LGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK 483
            LGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK
Sbjct: 634  LGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK 677


>ref|XP_012478637.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            isoform X3 [Gossypium raimondii]
          Length = 726

 Score =  495 bits (1274), Expect = e-137
 Identities = 276/463 (59%), Positives = 325/463 (70%), Gaps = 10/463 (2%)
 Frame = -2

Query: 1841 IEACAALSRSGMTNLSTQXXXXXXXXXXXXXXXXXXXXVQSANTGAVMNRQPGSVGTIPP 1662
            +E CAALSRSG+ +L+                         +  G++M+RQP S G +P 
Sbjct: 121  MEGCAALSRSGVPSLAPNQSPVKMDMASVNAVAGTPPTSVPSVNGSIMSRQPVSAGNVPT 180

Query: 1661 AIVKIEPTTVTSMS-GPTFPHIPSVPRASSQPIPNLQTSSPISASQDMVSTNENIQEMKP 1485
            A VK+EPTT+TSM+ GP FPHIPSVPRA  Q +P LQTSSP++ +++++ +++N+QE+KP
Sbjct: 181  ATVKVEPTTITSMANGPAFPHIPSVPRAPFQAVPMLQTSSPLTTTEEVMRSSDNVQEIKP 240

Query: 1484 IVSSMAQSLRPVGAAPANVRILNDVAQRQ-----ALAGGTSSMGLQSMGGTPI---LSNM 1329
             V  M Q LRPV  A ANV ILN+++Q +     AL+GGTS +GLQSMG TP+   +SNM
Sbjct: 241  SVGGMTQPLRPVPPAAANVNILNNLSQARVMNSAALSGGTS-IGLQSMGQTPVAMHMSNM 299

Query: 1328 ISSGMTSSVPAAQTLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1149
            ISSGMTSSVP AQT+                                             
Sbjct: 300  ISSGMTSSVPLAQTVFSSGQSGMTSLPGSGAVTGTTQVPPNSNLNSFASATSNVAGNSNI 359

Query: 1148 XXSQPLSNLQGGVSMGQTVP-SMSQGNLAGTQMVQSGMAMNQNMMXXXXXXXXXXXXATM 972
              SQP+ N+QG VSMGQ+VP SMSQGN +G Q+VQ+G+AM+Q+M              T+
Sbjct: 360  GISQPMCNVQGAVSMGQSVPGSMSQGNHSGAQLVQTGVAMSQSMSGLGPSTVSSGTG-TL 418

Query: 971  IPTPGMSQQVQPGMQPLGVNNNVGANMPLPQQTSNTLQSAQSKYVKVWEGNLSGQRQGQP 792
            IP PGMSQQVQ GMQ LGVNNN  A+MPL QQTS+ LQSAQSKYVKVWEGNLSGQRQGQP
Sbjct: 419  IPAPGMSQQVQSGMQTLGVNNNSAASMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQP 478

Query: 791  VFITRLEGYRSASASETLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFL 612
            VFITRLEGYRSASASETLA++WP TMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFL
Sbjct: 479  VFITRLEGYRSASASETLASDWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFL 538

Query: 611  GQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK 483
            GQLQEKKLCAVIQLPSQTL+LSVSDKA RLIGMLFPGDMVVFK
Sbjct: 539  GQLQEKKLCAVIQLPSQTLMLSVSDKAYRLIGMLFPGDMVVFK 581


>ref|XP_012478635.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            isoform X1 [Gossypium raimondii]
          Length = 840

 Score =  495 bits (1274), Expect = e-137
 Identities = 276/463 (59%), Positives = 325/463 (70%), Gaps = 10/463 (2%)
 Frame = -2

Query: 1841 IEACAALSRSGMTNLSTQXXXXXXXXXXXXXXXXXXXXVQSANTGAVMNRQPGSVGTIPP 1662
            +E CAALSRSG+ +L+                         +  G++M+RQP S G +P 
Sbjct: 235  MEGCAALSRSGVPSLAPNQSPVKMDMASVNAVAGTPPTSVPSVNGSIMSRQPVSAGNVPT 294

Query: 1661 AIVKIEPTTVTSMS-GPTFPHIPSVPRASSQPIPNLQTSSPISASQDMVSTNENIQEMKP 1485
            A VK+EPTT+TSM+ GP FPHIPSVPRA  Q +P LQTSSP++ +++++ +++N+QE+KP
Sbjct: 295  ATVKVEPTTITSMANGPAFPHIPSVPRAPFQAVPMLQTSSPLTTTEEVMRSSDNVQEIKP 354

Query: 1484 IVSSMAQSLRPVGAAPANVRILNDVAQRQ-----ALAGGTSSMGLQSMGGTPI---LSNM 1329
             V  M Q LRPV  A ANV ILN+++Q +     AL+GGTS +GLQSMG TP+   +SNM
Sbjct: 355  SVGGMTQPLRPVPPAAANVNILNNLSQARVMNSAALSGGTS-IGLQSMGQTPVAMHMSNM 413

Query: 1328 ISSGMTSSVPAAQTLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1149
            ISSGMTSSVP AQT+                                             
Sbjct: 414  ISSGMTSSVPLAQTVFSSGQSGMTSLPGSGAVTGTTQVPPNSNLNSFASATSNVAGNSNI 473

Query: 1148 XXSQPLSNLQGGVSMGQTVP-SMSQGNLAGTQMVQSGMAMNQNMMXXXXXXXXXXXXATM 972
              SQP+ N+QG VSMGQ+VP SMSQGN +G Q+VQ+G+AM+Q+M              T+
Sbjct: 474  GISQPMCNVQGAVSMGQSVPGSMSQGNHSGAQLVQTGVAMSQSMSGLGPSTVSSGTG-TL 532

Query: 971  IPTPGMSQQVQPGMQPLGVNNNVGANMPLPQQTSNTLQSAQSKYVKVWEGNLSGQRQGQP 792
            IP PGMSQQVQ GMQ LGVNNN  A+MPL QQTS+ LQSAQSKYVKVWEGNLSGQRQGQP
Sbjct: 533  IPAPGMSQQVQSGMQTLGVNNNSAASMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQP 592

Query: 791  VFITRLEGYRSASASETLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFL 612
            VFITRLEGYRSASASETLA++WP TMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFL
Sbjct: 593  VFITRLEGYRSASASETLASDWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFL 652

Query: 611  GQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK 483
            GQLQEKKLCAVIQLPSQTL+LSVSDKA RLIGMLFPGDMVVFK
Sbjct: 653  GQLQEKKLCAVIQLPSQTLMLSVSDKAYRLIGMLFPGDMVVFK 695


>ref|XP_012478636.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            isoform X2 [Gossypium raimondii]
            gi|763763083|gb|KJB30337.1| hypothetical protein
            B456_005G138200 [Gossypium raimondii]
          Length = 834

 Score =  495 bits (1274), Expect = e-137
 Identities = 276/463 (59%), Positives = 325/463 (70%), Gaps = 10/463 (2%)
 Frame = -2

Query: 1841 IEACAALSRSGMTNLSTQXXXXXXXXXXXXXXXXXXXXVQSANTGAVMNRQPGSVGTIPP 1662
            +E CAALSRSG+ +L+                         +  G++M+RQP S G +P 
Sbjct: 229  MEGCAALSRSGVPSLAPNQSPVKMDMASVNAVAGTPPTSVPSVNGSIMSRQPVSAGNVPT 288

Query: 1661 AIVKIEPTTVTSMS-GPTFPHIPSVPRASSQPIPNLQTSSPISASQDMVSTNENIQEMKP 1485
            A VK+EPTT+TSM+ GP FPHIPSVPRA  Q +P LQTSSP++ +++++ +++N+QE+KP
Sbjct: 289  ATVKVEPTTITSMANGPAFPHIPSVPRAPFQAVPMLQTSSPLTTTEEVMRSSDNVQEIKP 348

Query: 1484 IVSSMAQSLRPVGAAPANVRILNDVAQRQ-----ALAGGTSSMGLQSMGGTPI---LSNM 1329
             V  M Q LRPV  A ANV ILN+++Q +     AL+GGTS +GLQSMG TP+   +SNM
Sbjct: 349  SVGGMTQPLRPVPPAAANVNILNNLSQARVMNSAALSGGTS-IGLQSMGQTPVAMHMSNM 407

Query: 1328 ISSGMTSSVPAAQTLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1149
            ISSGMTSSVP AQT+                                             
Sbjct: 408  ISSGMTSSVPLAQTVFSSGQSGMTSLPGSGAVTGTTQVPPNSNLNSFASATSNVAGNSNI 467

Query: 1148 XXSQPLSNLQGGVSMGQTVP-SMSQGNLAGTQMVQSGMAMNQNMMXXXXXXXXXXXXATM 972
              SQP+ N+QG VSMGQ+VP SMSQGN +G Q+VQ+G+AM+Q+M              T+
Sbjct: 468  GISQPMCNVQGAVSMGQSVPGSMSQGNHSGAQLVQTGVAMSQSMSGLGPSTVSSGTG-TL 526

Query: 971  IPTPGMSQQVQPGMQPLGVNNNVGANMPLPQQTSNTLQSAQSKYVKVWEGNLSGQRQGQP 792
            IP PGMSQQVQ GMQ LGVNNN  A+MPL QQTS+ LQSAQSKYVKVWEGNLSGQRQGQP
Sbjct: 527  IPAPGMSQQVQSGMQTLGVNNNSAASMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQP 586

Query: 791  VFITRLEGYRSASASETLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFL 612
            VFITRLEGYRSASASETLA++WP TMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFL
Sbjct: 587  VFITRLEGYRSASASETLASDWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFL 646

Query: 611  GQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK 483
            GQLQEKKLCAVIQLPSQTL+LSVSDKA RLIGMLFPGDMVVFK
Sbjct: 647  GQLQEKKLCAVIQLPSQTLMLSVSDKAYRLIGMLFPGDMVVFK 689


>gb|KHG24986.1| Mediator of RNA polymerase II transcription subunit 25 [Gossypium
            arboreum]
          Length = 828

 Score =  493 bits (1270), Expect = e-136
 Identities = 274/463 (59%), Positives = 325/463 (70%), Gaps = 10/463 (2%)
 Frame = -2

Query: 1841 IEACAALSRSGMTNLSTQXXXXXXXXXXXXXXXXXXXXVQSANTGAVMNRQPGSVGTIPP 1662
            +E CAALSRSG+ +L+                         +  G++M+RQP SVG +P 
Sbjct: 229  MEGCAALSRSGVPSLAPNQSPVKMDMASVTSVAGTSPTSVPSVNGSIMSRQPVSVGNVPT 288

Query: 1661 AIVKIEPTTVTSMS-GPTFPHIPSVPRASSQPIPNLQTSSPISASQDMVSTNENIQEMKP 1485
            A VK+EP T+TSM+ GP FPHIPSVPRA  Q +P LQTSSP++ +++++ +++N+QE+KP
Sbjct: 289  ATVKVEPATITSMANGPAFPHIPSVPRAPFQAVPTLQTSSPLTTTEEVMRSSDNVQEIKP 348

Query: 1484 IVSSMAQSLRPVGAAPANVRILNDVAQRQ-----ALAGGTSSMGLQSMGGTPI---LSNM 1329
             V  M Q LRPV  A ANV ILN+++Q +     AL+GGTS +GLQSMG TP+   +SNM
Sbjct: 349  SVGGMTQPLRPVPPAAANVNILNNLSQARVMNSAALSGGTS-IGLQSMGQTPVAMHMSNM 407

Query: 1328 ISSGMTSSVPAAQTLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1149
            ISSGMTSSVP AQT+                                             
Sbjct: 408  ISSGMTSSVPLAQTVFSSGQSAMTSLPGSGAVTGTTQVPPNSNLNSFASATSNVAGNSNI 467

Query: 1148 XXSQPLSNLQGGVSMGQTVP-SMSQGNLAGTQMVQSGMAMNQNMMXXXXXXXXXXXXATM 972
              SQP+ N+QG VSMGQ+VP SMS GN +G Q+VQ+G+AM+Q+M              T+
Sbjct: 468  GISQPMCNVQGAVSMGQSVPGSMSHGNHSGAQLVQTGVAMSQSMSGLGPSTVSSGTG-TL 526

Query: 971  IPTPGMSQQVQPGMQPLGVNNNVGANMPLPQQTSNTLQSAQSKYVKVWEGNLSGQRQGQP 792
            IPTPG+SQQVQ GMQ +GVNNN  A+MPL QQTS+ LQSAQSKYVKVWEGNLSGQRQGQP
Sbjct: 527  IPTPGLSQQVQSGMQTIGVNNNSAASMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQP 586

Query: 791  VFITRLEGYRSASASETLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFL 612
            VFITRLEGYRSASASETLA++WP TMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFL
Sbjct: 587  VFITRLEGYRSASASETLASDWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFL 646

Query: 611  GQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK 483
            GQLQEKKLCAVIQLPSQTL+LSVSDKA RLIGMLFPGDMVVFK
Sbjct: 647  GQLQEKKLCAVIQLPSQTLMLSVSDKAYRLIGMLFPGDMVVFK 689


>ref|XP_012082045.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            isoform X2 [Jatropha curcas]
          Length = 720

 Score =  492 bits (1267), Expect = e-136
 Identities = 278/463 (60%), Positives = 319/463 (68%), Gaps = 10/463 (2%)
 Frame = -2

Query: 1841 IEACAALSRSGMTNLSTQXXXXXXXXXXXXXXXXXXXXVQSANTGAVMNRQPGSVGTIPP 1662
            +EA  AL+R G++NLS                        S+  G++MNR P SVG +P 
Sbjct: 229  MEARTALTRPGVSNLSANQSPVKMDVSSVPSVAGPPPPSISSVNGSIMNRPPISVGNVPT 288

Query: 1661 AIVKIEPTTVTSMS-GPTFPHIPSVPRASSQPIPNLQTSSPISASQDMVSTNENIQEMKP 1485
            A VKIEPTTVTSM+ GP F HIPS  R ++Q +P+LQTSSP + SQ+M++  EN+ E+KP
Sbjct: 289  ATVKIEPTTVTSMAPGPVFSHIPSA-RPATQAVPSLQTSSPPTTSQEMMTNGENVPELKP 347

Query: 1484 IVSSMAQSLRPVGAAPANVRILNDVAQRQ------ALAGGTSSMGLQSMGGTPI---LSN 1332
             VS M QS+RPV    ANV ILN+++Q +      AL GG SS+ L SM  TP+   +SN
Sbjct: 348  TVSGMPQSVRPVPPGAANVSILNNLSQARQVMNSAALTGG-SSIALPSMNQTPVAMHMSN 406

Query: 1331 MISSGMTSSVPAAQTLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1152
            MISSGM +SVPAAQT+                                            
Sbjct: 407  MISSGMATSVPAAQTVFSSGQPGITSMTGSGTLTGTSQIAPNSGLGSFASSTSNISGNSN 466

Query: 1151 XXXSQPLSNLQGGVSMGQTVPSMSQGNLAGTQMVQSGMAMNQNMMXXXXXXXXXXXXATM 972
               SQP++NLQGGVSMGQ+V  MSQGNL+G QMVQS + MNQN+M            +TM
Sbjct: 467  LGISQPMANLQGGVSMGQSVSGMSQGNLSGGQMVQSVIGMNQNVMNGLGPSGVSSGTSTM 526

Query: 971  IPTPGMSQQVQPGMQPLGVNNNVGANMPLPQQTSNTLQSAQSKYVKVWEGNLSGQRQGQP 792
            IPTPGM QQ Q GMQ LGVNNN  ANMPL QQT++ LQSAQSKYVKVWEGNLSGQRQGQP
Sbjct: 527  IPTPGMPQQAQTGMQSLGVNNNSAANMPLSQQTTSALQSAQSKYVKVWEGNLSGQRQGQP 586

Query: 791  VFITRLEGYRSASASETLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFL 612
            VFITRLEGYR+ASASE+LAANWP TMQIVRLISQDHMNNKQYVGKADFLVFRAM+QHGFL
Sbjct: 587  VFITRLEGYRNASASESLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMDQHGFL 646

Query: 611  GQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK 483
            GQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK
Sbjct: 647  GQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK 689


>ref|XP_012082044.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            isoform X1 [Jatropha curcas]
          Length = 842

 Score =  492 bits (1267), Expect = e-136
 Identities = 278/463 (60%), Positives = 319/463 (68%), Gaps = 10/463 (2%)
 Frame = -2

Query: 1841 IEACAALSRSGMTNLSTQXXXXXXXXXXXXXXXXXXXXVQSANTGAVMNRQPGSVGTIPP 1662
            +EA  AL+R G++NLS                        S+  G++MNR P SVG +P 
Sbjct: 229  MEARTALTRPGVSNLSANQSPVKMDVSSVPSVAGPPPPSISSVNGSIMNRPPISVGNVPT 288

Query: 1661 AIVKIEPTTVTSMS-GPTFPHIPSVPRASSQPIPNLQTSSPISASQDMVSTNENIQEMKP 1485
            A VKIEPTTVTSM+ GP F HIPS  R ++Q +P+LQTSSP + SQ+M++  EN+ E+KP
Sbjct: 289  ATVKIEPTTVTSMAPGPVFSHIPSA-RPATQAVPSLQTSSPPTTSQEMMTNGENVPELKP 347

Query: 1484 IVSSMAQSLRPVGAAPANVRILNDVAQRQ------ALAGGTSSMGLQSMGGTPI---LSN 1332
             VS M QS+RPV    ANV ILN+++Q +      AL GG SS+ L SM  TP+   +SN
Sbjct: 348  TVSGMPQSVRPVPPGAANVSILNNLSQARQVMNSAALTGG-SSIALPSMNQTPVAMHMSN 406

Query: 1331 MISSGMTSSVPAAQTLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1152
            MISSGM +SVPAAQT+                                            
Sbjct: 407  MISSGMATSVPAAQTVFSSGQPGITSMTGSGTLTGTSQIAPNSGLGSFASSTSNISGNSN 466

Query: 1151 XXXSQPLSNLQGGVSMGQTVPSMSQGNLAGTQMVQSGMAMNQNMMXXXXXXXXXXXXATM 972
               SQP++NLQGGVSMGQ+V  MSQGNL+G QMVQS + MNQN+M            +TM
Sbjct: 467  LGISQPMANLQGGVSMGQSVSGMSQGNLSGGQMVQSVIGMNQNVMNGLGPSGVSSGTSTM 526

Query: 971  IPTPGMSQQVQPGMQPLGVNNNVGANMPLPQQTSNTLQSAQSKYVKVWEGNLSGQRQGQP 792
            IPTPGM QQ Q GMQ LGVNNN  ANMPL QQT++ LQSAQSKYVKVWEGNLSGQRQGQP
Sbjct: 527  IPTPGMPQQAQTGMQSLGVNNNSAANMPLSQQTTSALQSAQSKYVKVWEGNLSGQRQGQP 586

Query: 791  VFITRLEGYRSASASETLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFL 612
            VFITRLEGYR+ASASE+LAANWP TMQIVRLISQDHMNNKQYVGKADFLVFRAM+QHGFL
Sbjct: 587  VFITRLEGYRNASASESLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMDQHGFL 646

Query: 611  GQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK 483
            GQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK
Sbjct: 647  GQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK 689



 Score = 59.7 bits (143), Expect = 9e-06
 Identities = 27/39 (69%), Positives = 31/39 (79%)
 Frame = -2

Query: 131 MVGTGLGQPYMQGPGRSPLMSQGQVSSQGPPTMSGGPFM 15
           MVGTG+ Q Y+QGPGRS L+SQG VSSQGP  + GG FM
Sbjct: 803 MVGTGMAQAYVQGPGRSQLVSQGHVSSQGPTNLPGGGFM 841


>gb|KDO70070.1| hypothetical protein CISIN_1g003284mg [Citrus sinensis]
          Length = 818

 Score =  492 bits (1266), Expect = e-136
 Identities = 277/463 (59%), Positives = 319/463 (68%), Gaps = 10/463 (2%)
 Frame = -2

Query: 1841 IEACAALSRSGMTNLSTQXXXXXXXXXXXXXXXXXXXXVQSANTGAVMNRQPGSVGTIPP 1662
            +EA AALSR G+ NL+                         +  G  +NR P SVG +P 
Sbjct: 213  MEARAALSRPGVANLAPNQNPVKMDIAPVTSVTGPAPTSIPSVNG--INRPPISVGNVPT 270

Query: 1661 AIVKIEPTTVTSM-SGPTFPHIPSVPRASSQPIPNLQTSSPISASQDMVSTNENIQEMKP 1485
            A VK+EP+TVTSM +GPTFPHIPSVPR +SQ +P+LQTSSP S SQ+M+++ +++ E+KP
Sbjct: 271  ATVKVEPSTVTSMVNGPTFPHIPSVPRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKP 330

Query: 1484 IVSSMAQSLRPVGAAPANVRILNDVAQRQ------ALAGGTSSMGLQSMGGTPI---LSN 1332
            +VS M+Q LRP+  A ANV ILN+++Q +      AL GGTS +GLQSMG TP+   +SN
Sbjct: 331  LVSGMSQPLRPMAPAAANVNILNNLSQARQVMNNAALTGGTS-IGLQSMGQTPMAMHMSN 389

Query: 1331 MISSGMTSSVPAAQTLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1152
            MISSGM SSVP +Q +                                            
Sbjct: 390  MISSGMASSVPTSQPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSN 449

Query: 1151 XXXSQPLSNLQGGVSMGQTVPSMSQGNLAGTQMVQSGMAMNQNMMXXXXXXXXXXXXATM 972
               SQP+  LQGG SMGQ+V  MSQGN +G QMVQ+G++MNQNMM             TM
Sbjct: 450  PSISQPMGTLQGGASMGQSV-GMSQGNHSGGQMVQNGISMNQNMMSGLGPSGVSSGTGTM 508

Query: 971  IPTPGMSQQVQPGMQPLGVNNNVGANMPLPQQTSNTLQSAQSKYVKVWEGNLSGQRQGQP 792
            IPTPGMSQQ Q GMQPL VNNN   NM L QQTS+ L S+QSKYVKVWEG+LSGQRQGQP
Sbjct: 509  IPTPGMSQQAQSGMQPLSVNNNTAVNMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQP 568

Query: 791  VFITRLEGYRSASASETLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFL 612
            VFIT+LEGYRSASASETLAANWP TMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFL
Sbjct: 569  VFITKLEGYRSASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFL 628

Query: 611  GQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK 483
            GQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK
Sbjct: 629  GQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK 671



 Score = 62.0 bits (149), Expect = 2e-06
 Identities = 28/40 (70%), Positives = 34/40 (85%)
 Frame = -2

Query: 131 MVGTGLGQPYMQGPGRSPLMSQGQVSSQGPPTMSGGPFMS 12
           MVG+G+GQ Y+QGPGR+ L+SQGQVSSQG P + GG FMS
Sbjct: 779 MVGSGMGQGYVQGPGRTQLVSQGQVSSQGAPNIPGGGFMS 818


>gb|KDO70069.1| hypothetical protein CISIN_1g003284mg [Citrus sinensis]
          Length = 834

 Score =  492 bits (1266), Expect = e-136
 Identities = 277/463 (59%), Positives = 319/463 (68%), Gaps = 10/463 (2%)
 Frame = -2

Query: 1841 IEACAALSRSGMTNLSTQXXXXXXXXXXXXXXXXXXXXVQSANTGAVMNRQPGSVGTIPP 1662
            +EA AALSR G+ NL+                         +  G  +NR P SVG +P 
Sbjct: 229  MEARAALSRPGVANLAPNQNPVKMDIAPVTSVTGPAPTSIPSVNG--INRPPISVGNVPT 286

Query: 1661 AIVKIEPTTVTSM-SGPTFPHIPSVPRASSQPIPNLQTSSPISASQDMVSTNENIQEMKP 1485
            A VK+EP+TVTSM +GPTFPHIPSVPR +SQ +P+LQTSSP S SQ+M+++ +++ E+KP
Sbjct: 287  ATVKVEPSTVTSMVNGPTFPHIPSVPRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKP 346

Query: 1484 IVSSMAQSLRPVGAAPANVRILNDVAQRQ------ALAGGTSSMGLQSMGGTPI---LSN 1332
            +VS M+Q LRP+  A ANV ILN+++Q +      AL GGTS +GLQSMG TP+   +SN
Sbjct: 347  LVSGMSQPLRPMAPAAANVNILNNLSQARQVMNNAALTGGTS-IGLQSMGQTPMAMHMSN 405

Query: 1331 MISSGMTSSVPAAQTLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1152
            MISSGM SSVP +Q +                                            
Sbjct: 406  MISSGMASSVPTSQPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSN 465

Query: 1151 XXXSQPLSNLQGGVSMGQTVPSMSQGNLAGTQMVQSGMAMNQNMMXXXXXXXXXXXXATM 972
               SQP+  LQGG SMGQ+V  MSQGN +G QMVQ+G++MNQNMM             TM
Sbjct: 466  PSISQPMGTLQGGASMGQSV-GMSQGNHSGGQMVQNGISMNQNMMSGLGPSGVSSGTGTM 524

Query: 971  IPTPGMSQQVQPGMQPLGVNNNVGANMPLPQQTSNTLQSAQSKYVKVWEGNLSGQRQGQP 792
            IPTPGMSQQ Q GMQPL VNNN   NM L QQTS+ L S+QSKYVKVWEG+LSGQRQGQP
Sbjct: 525  IPTPGMSQQAQSGMQPLSVNNNTAVNMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQP 584

Query: 791  VFITRLEGYRSASASETLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFL 612
            VFIT+LEGYRSASASETLAANWP TMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFL
Sbjct: 585  VFITKLEGYRSASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFL 644

Query: 611  GQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK 483
            GQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK
Sbjct: 645  GQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK 687



 Score = 62.0 bits (149), Expect = 2e-06
 Identities = 28/40 (70%), Positives = 34/40 (85%)
 Frame = -2

Query: 131 MVGTGLGQPYMQGPGRSPLMSQGQVSSQGPPTMSGGPFMS 12
           MVG+G+GQ Y+QGPGR+ L+SQGQVSSQG P + GG FMS
Sbjct: 795 MVGSGMGQGYVQGPGRTQLVSQGQVSSQGAPNIPGGGFMS 834


>gb|KDO70068.1| hypothetical protein CISIN_1g003284mg [Citrus sinensis]
          Length = 833

 Score =  492 bits (1266), Expect = e-136
 Identities = 277/463 (59%), Positives = 319/463 (68%), Gaps = 10/463 (2%)
 Frame = -2

Query: 1841 IEACAALSRSGMTNLSTQXXXXXXXXXXXXXXXXXXXXVQSANTGAVMNRQPGSVGTIPP 1662
            +EA AALSR G+ NL+                         +  G  +NR P SVG +P 
Sbjct: 228  MEARAALSRPGVANLAPNQNPVKMDIAPVTSVTGPAPTSIPSVNG--INRPPISVGNVPT 285

Query: 1661 AIVKIEPTTVTSM-SGPTFPHIPSVPRASSQPIPNLQTSSPISASQDMVSTNENIQEMKP 1485
            A VK+EP+TVTSM +GPTFPHIPSVPR +SQ +P+LQTSSP S SQ+M+++ +++ E+KP
Sbjct: 286  ATVKVEPSTVTSMVNGPTFPHIPSVPRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKP 345

Query: 1484 IVSSMAQSLRPVGAAPANVRILNDVAQRQ------ALAGGTSSMGLQSMGGTPI---LSN 1332
            +VS M+Q LRP+  A ANV ILN+++Q +      AL GGTS +GLQSMG TP+   +SN
Sbjct: 346  LVSGMSQPLRPMAPAAANVNILNNLSQARQVMNNAALTGGTS-IGLQSMGQTPMAMHMSN 404

Query: 1331 MISSGMTSSVPAAQTLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1152
            MISSGM SSVP +Q +                                            
Sbjct: 405  MISSGMASSVPTSQPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSN 464

Query: 1151 XXXSQPLSNLQGGVSMGQTVPSMSQGNLAGTQMVQSGMAMNQNMMXXXXXXXXXXXXATM 972
               SQP+  LQGG SMGQ+V  MSQGN +G QMVQ+G++MNQNMM             TM
Sbjct: 465  PSISQPMGTLQGGASMGQSV-GMSQGNHSGGQMVQNGISMNQNMMSGLGPSGVSSGTGTM 523

Query: 971  IPTPGMSQQVQPGMQPLGVNNNVGANMPLPQQTSNTLQSAQSKYVKVWEGNLSGQRQGQP 792
            IPTPGMSQQ Q GMQPL VNNN   NM L QQTS+ L S+QSKYVKVWEG+LSGQRQGQP
Sbjct: 524  IPTPGMSQQAQSGMQPLSVNNNTAVNMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQP 583

Query: 791  VFITRLEGYRSASASETLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFL 612
            VFIT+LEGYRSASASETLAANWP TMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFL
Sbjct: 584  VFITKLEGYRSASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFL 643

Query: 611  GQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK 483
            GQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK
Sbjct: 644  GQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK 686



 Score = 62.0 bits (149), Expect = 2e-06
 Identities = 28/40 (70%), Positives = 34/40 (85%)
 Frame = -2

Query: 131 MVGTGLGQPYMQGPGRSPLMSQGQVSSQGPPTMSGGPFMS 12
           MVG+G+GQ Y+QGPGR+ L+SQGQVSSQG P + GG FMS
Sbjct: 794 MVGSGMGQGYVQGPGRTQLVSQGQVSSQGAPNIPGGGFMS 833


>ref|XP_007046291.1| Phytochrome and flowering time regulatory protein isoform 1
            [Theobroma cacao] gi|508710226|gb|EOY02123.1| Phytochrome
            and flowering time regulatory protein isoform 1
            [Theobroma cacao]
          Length = 871

 Score =  491 bits (1263), Expect = e-135
 Identities = 276/462 (59%), Positives = 320/462 (69%), Gaps = 9/462 (1%)
 Frame = -2

Query: 1841 IEACAALSRSGMTNLSTQXXXXXXXXXXXXXXXXXXXXVQSANTGAVMNRQPGSVGTIPP 1662
            +E  AALSR G+ +L++                        +  G++M+RQP SVG +P 
Sbjct: 229  MEGRAALSRPGVPSLASNQSPVKMDMASVTSGTGPPPTSVPSVNGSMMSRQPVSVGNVPT 288

Query: 1661 AIVKIEPTTVTSM-SGPTFPHIPSVPRASSQPIPNLQTSSPISASQDMVSTNENIQEMKP 1485
            A +K+EPTT+TSM +GP FPHIP+VPRA S  IP +QTSSP + SQ+++++ +N+QE+KP
Sbjct: 289  ATIKVEPTTITSMGTGPAFPHIPAVPRAPSPAIPTMQTSSPSTTSQEVMNSGDNVQELKP 348

Query: 1484 IVSSMAQSLRPVGAAPANVRILNDVAQRQ-----ALAGGTSSMGLQSMGGTPI---LSNM 1329
             VS M Q LRPV  A ANV ILN+++Q +     AL GGTS +GL SMG TP+   +SNM
Sbjct: 349  SVSGMTQPLRPVPPA-ANVNILNNLSQARVMNSAALTGGTS-IGLPSMGQTPVAMHMSNM 406

Query: 1328 ISSGMTSSVPAAQTLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1149
            ISSGM SSVP AQT+                                             
Sbjct: 407  ISSGMASSVPPAQTVFSSGQSCMTSLTGSGALTGTVQVPPNSGLSSFASATSNVTANSNI 466

Query: 1148 XXSQPLSNLQGGVSMGQTVPSMSQGNLAGTQMVQSGMAMNQNMMXXXXXXXXXXXXATMI 969
              SQP+ N+Q GVSMGQ+VP MSQGN +G QMVQSG+ M+QNM              TM 
Sbjct: 467  GMSQPMGNVQSGVSMGQSVPGMSQGNHSGAQMVQSGVGMSQNMSGLGPSTVSSGTG-TMF 525

Query: 968  PTPGMSQQVQPGMQPLGVNNNVGANMPLPQQTSNTLQSAQSKYVKVWEGNLSGQRQGQPV 789
            P PGMSQQVQ GMQ LGV+N+  A+MPL QQTS+ LQSAQSKYVKVWEGNLSGQRQGQPV
Sbjct: 526  PIPGMSQQVQSGMQTLGVSNSSAASMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPV 585

Query: 788  FITRLEGYRSASASETLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLG 609
            FITRLEGYRSASASETLAA+WP TMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLG
Sbjct: 586  FITRLEGYRSASASETLAAHWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLG 645

Query: 608  QLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK 483
            QLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK
Sbjct: 646  QLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK 687



 Score = 62.0 bits (149), Expect = 2e-06
 Identities = 28/39 (71%), Positives = 32/39 (82%)
 Frame = -2

Query: 131 MVGTGLGQPYMQGPGRSPLMSQGQVSSQGPPTMSGGPFM 15
           MVG+G+G  Y+QGPGRS L+SQGQVSSQ PP M GG FM
Sbjct: 832 MVGSGMGPAYVQGPGRSQLVSQGQVSSQAPPNMPGGGFM 870


>ref|XP_006484420.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like isoform X2 [Citrus sinensis]
          Length = 829

 Score =  489 bits (1258), Expect = e-135
 Identities = 276/463 (59%), Positives = 318/463 (68%), Gaps = 10/463 (2%)
 Frame = -2

Query: 1841 IEACAALSRSGMTNLSTQXXXXXXXXXXXXXXXXXXXXVQSANTGAVMNRQPGSVGTIPP 1662
            +EA AALSR G+ NL+                         +  G  +NR P SVG +P 
Sbjct: 228  MEARAALSRPGVANLAPNQNPVKMDIAPVTSVTGPAPTSIPSVNG--INRPPISVGNVPT 285

Query: 1661 AIVKIEPTTVTSM-SGPTFPHIPSVPRASSQPIPNLQTSSPISASQDMVSTNENIQEMKP 1485
            A VK+EP+TVTSM +GPTFPHIPSV R +SQ +P+LQTSSP S SQ+M+++ +++ E+KP
Sbjct: 286  ATVKVEPSTVTSMVNGPTFPHIPSVSRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKP 345

Query: 1484 IVSSMAQSLRPVGAAPANVRILNDVAQRQ------ALAGGTSSMGLQSMGGTPI---LSN 1332
            +VS M+Q LRP+  A ANV ILN+++Q +      AL GGTS +GLQSMG TP+   +SN
Sbjct: 346  LVSGMSQPLRPMAPAAANVNILNNLSQARQVMNNAALTGGTS-IGLQSMGQTPMAMHMSN 404

Query: 1331 MISSGMTSSVPAAQTLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1152
            MISSGM SSVP +Q +                                            
Sbjct: 405  MISSGMASSVPTSQPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSN 464

Query: 1151 XXXSQPLSNLQGGVSMGQTVPSMSQGNLAGTQMVQSGMAMNQNMMXXXXXXXXXXXXATM 972
               SQP+  LQGG SMGQ+V  MSQGN +G QMVQ+G++MNQNMM             TM
Sbjct: 465  PSISQPMGTLQGGASMGQSV-GMSQGNHSGGQMVQNGISMNQNMMSGLGPSGVSSGTGTM 523

Query: 971  IPTPGMSQQVQPGMQPLGVNNNVGANMPLPQQTSNTLQSAQSKYVKVWEGNLSGQRQGQP 792
            IPTPGMSQQ Q GMQPL VNNN   NM L QQTS+ L S+QSKYVKVWEG+LSGQRQGQP
Sbjct: 524  IPTPGMSQQAQSGMQPLSVNNNTAVNMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQP 583

Query: 791  VFITRLEGYRSASASETLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFL 612
            VFIT+LEGYRSASASETLAANWP TMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFL
Sbjct: 584  VFITKLEGYRSASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFL 643

Query: 611  GQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK 483
            GQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK
Sbjct: 644  GQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK 686



 Score = 62.0 bits (149), Expect = 2e-06
 Identities = 28/40 (70%), Positives = 34/40 (85%)
 Frame = -2

Query: 131 MVGTGLGQPYMQGPGRSPLMSQGQVSSQGPPTMSGGPFMS 12
           MVG+G+GQ Y+QGPGR+ L+SQGQVSSQG P + GG FMS
Sbjct: 790 MVGSGMGQGYVQGPGRTQLVSQGQVSSQGAPNIPGGGFMS 829


>ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citrus clementina]
            gi|568861864|ref|XP_006484419.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 25-like isoform
            X1 [Citrus sinensis] gi|557539921|gb|ESR50965.1|
            hypothetical protein CICLE_v10030710mg [Citrus
            clementina]
          Length = 830

 Score =  489 bits (1258), Expect = e-135
 Identities = 276/463 (59%), Positives = 318/463 (68%), Gaps = 10/463 (2%)
 Frame = -2

Query: 1841 IEACAALSRSGMTNLSTQXXXXXXXXXXXXXXXXXXXXVQSANTGAVMNRQPGSVGTIPP 1662
            +EA AALSR G+ NL+                         +  G  +NR P SVG +P 
Sbjct: 229  MEARAALSRPGVANLAPNQNPVKMDIAPVTSVTGPAPTSIPSVNG--INRPPISVGNVPT 286

Query: 1661 AIVKIEPTTVTSM-SGPTFPHIPSVPRASSQPIPNLQTSSPISASQDMVSTNENIQEMKP 1485
            A VK+EP+TVTSM +GPTFPHIPSV R +SQ +P+LQTSSP S SQ+M+++ +++ E+KP
Sbjct: 287  ATVKVEPSTVTSMVNGPTFPHIPSVSRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKP 346

Query: 1484 IVSSMAQSLRPVGAAPANVRILNDVAQRQ------ALAGGTSSMGLQSMGGTPI---LSN 1332
            +VS M+Q LRP+  A ANV ILN+++Q +      AL GGTS +GLQSMG TP+   +SN
Sbjct: 347  LVSGMSQPLRPMAPAAANVNILNNLSQARQVMNNAALTGGTS-IGLQSMGQTPMAMHMSN 405

Query: 1331 MISSGMTSSVPAAQTLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1152
            MISSGM SSVP +Q +                                            
Sbjct: 406  MISSGMASSVPTSQPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSN 465

Query: 1151 XXXSQPLSNLQGGVSMGQTVPSMSQGNLAGTQMVQSGMAMNQNMMXXXXXXXXXXXXATM 972
               SQP+  LQGG SMGQ+V  MSQGN +G QMVQ+G++MNQNMM             TM
Sbjct: 466  PSISQPMGTLQGGASMGQSV-GMSQGNHSGGQMVQNGISMNQNMMSGLGPSGVSSGTGTM 524

Query: 971  IPTPGMSQQVQPGMQPLGVNNNVGANMPLPQQTSNTLQSAQSKYVKVWEGNLSGQRQGQP 792
            IPTPGMSQQ Q GMQPL VNNN   NM L QQTS+ L S+QSKYVKVWEG+LSGQRQGQP
Sbjct: 525  IPTPGMSQQAQSGMQPLSVNNNTAVNMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQP 584

Query: 791  VFITRLEGYRSASASETLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFL 612
            VFIT+LEGYRSASASETLAANWP TMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFL
Sbjct: 585  VFITKLEGYRSASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFL 644

Query: 611  GQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK 483
            GQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK
Sbjct: 645  GQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK 687



 Score = 62.0 bits (149), Expect = 2e-06
 Identities = 28/40 (70%), Positives = 34/40 (85%)
 Frame = -2

Query: 131 MVGTGLGQPYMQGPGRSPLMSQGQVSSQGPPTMSGGPFMS 12
           MVG+G+GQ Y+QGPGR+ L+SQGQVSSQG P + GG FMS
Sbjct: 791 MVGSGMGQGYVQGPGRTQLVSQGQVSSQGAPNIPGGGFMS 830


>ref|XP_007046292.1| Phytochrome and flowering time regulatory protein isoform 2
            [Theobroma cacao] gi|508710227|gb|EOY02124.1| Phytochrome
            and flowering time regulatory protein isoform 2
            [Theobroma cacao]
          Length = 860

 Score =  488 bits (1255), Expect = e-134
 Identities = 276/462 (59%), Positives = 321/462 (69%), Gaps = 9/462 (1%)
 Frame = -2

Query: 1841 IEACAALSRSGMTNLSTQXXXXXXXXXXXXXXXXXXXXVQSANTGAVMNRQPGSVGTIPP 1662
            +E  AALSR G+ +L++                       ++  G++M+RQP SVG +P 
Sbjct: 229  MEGRAALSRPGVPSLASNQSPVKMDMASV-----------TSVNGSMMSRQPVSVGNVPT 277

Query: 1661 AIVKIEPTTVTSM-SGPTFPHIPSVPRASSQPIPNLQTSSPISASQDMVSTNENIQEMKP 1485
            A +K+EPTT+TSM +GP FPHIP+VPRA S  IP +QTSSP + SQ+++++ +N+QE+KP
Sbjct: 278  ATIKVEPTTITSMGTGPAFPHIPAVPRAPSPAIPTMQTSSPSTTSQEVMNSGDNVQELKP 337

Query: 1484 IVSSMAQSLRPVGAAPANVRILNDVAQRQ-----ALAGGTSSMGLQSMGGTPI---LSNM 1329
             VS M Q LRPV  A ANV ILN+++Q +     AL GGTS +GL SMG TP+   +SNM
Sbjct: 338  SVSGMTQPLRPVPPA-ANVNILNNLSQARVMNSAALTGGTS-IGLPSMGQTPVAMHMSNM 395

Query: 1328 ISSGMTSSVPAAQTLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1149
            ISSGM SSVP AQT+                                             
Sbjct: 396  ISSGMASSVPPAQTVFSSGQSCMTSLTGSGALTGTVQVPPNSGLSSFASATSNVTANSNI 455

Query: 1148 XXSQPLSNLQGGVSMGQTVPSMSQGNLAGTQMVQSGMAMNQNMMXXXXXXXXXXXXATMI 969
              SQP+ N+Q GVSMGQ+VP MSQGN +G QMVQSG+ M+QNM              TM 
Sbjct: 456  GMSQPMGNVQSGVSMGQSVPGMSQGNHSGAQMVQSGVGMSQNMSGLGPSTVSSGTG-TMF 514

Query: 968  PTPGMSQQVQPGMQPLGVNNNVGANMPLPQQTSNTLQSAQSKYVKVWEGNLSGQRQGQPV 789
            P PGMSQQVQ GMQ LGV+N+  A+MPL QQTS+ LQSAQSKYVKVWEGNLSGQRQGQPV
Sbjct: 515  PIPGMSQQVQSGMQTLGVSNSSAASMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPV 574

Query: 788  FITRLEGYRSASASETLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLG 609
            FITRLEGYRSASASETLAA+WP TMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLG
Sbjct: 575  FITRLEGYRSASASETLAAHWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLG 634

Query: 608  QLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK 483
            QLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK
Sbjct: 635  QLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFK 676



 Score = 62.0 bits (149), Expect = 2e-06
 Identities = 28/39 (71%), Positives = 32/39 (82%)
 Frame = -2

Query: 131 MVGTGLGQPYMQGPGRSPLMSQGQVSSQGPPTMSGGPFM 15
           MVG+G+G  Y+QGPGRS L+SQGQVSSQ PP M GG FM
Sbjct: 821 MVGSGMGPAYVQGPGRSQLVSQGQVSSQAPPNMPGGGFM 859