BLASTX nr result
ID: Gardenia21_contig00003983
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Gardenia21_contig00003983
(3892 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDO96965.1| unnamed protein product [Coffea canephora] 1246 0.0
ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containi... 659 0.0
ref|XP_009799357.1| PREDICTED: pentatricopeptide repeat-containi... 635 0.0
ref|XP_009589920.1| PREDICTED: pentatricopeptide repeat-containi... 635 0.0
emb|CBI37948.3| unnamed protein product [Vitis vinifera] 635 0.0
ref|XP_006359636.1| PREDICTED: pentatricopeptide repeat-containi... 621 0.0
ref|XP_011088516.1| PREDICTED: pentatricopeptide repeat-containi... 626 0.0
ref|XP_009799358.1| PREDICTED: pentatricopeptide repeat-containi... 610 0.0
ref|XP_009589921.1| PREDICTED: pentatricopeptide repeat-containi... 607 0.0
ref|XP_012837131.1| PREDICTED: pentatricopeptide repeat-containi... 647 0.0
ref|XP_006359637.1| PREDICTED: pentatricopeptide repeat-containi... 612 0.0
ref|XP_007041957.1| Pentatricopeptide repeat-containing protein,... 619 0.0
ref|XP_004231448.1| PREDICTED: pentatricopeptide repeat-containi... 595 0.0
ref|XP_010315357.1| PREDICTED: pentatricopeptide repeat-containi... 595 0.0
ref|XP_002534048.1| pentatricopeptide repeat-containing protein,... 630 0.0
ref|XP_012084399.1| PREDICTED: pentatricopeptide repeat-containi... 600 0.0
ref|XP_002306163.2| hypothetical protein POPTR_0004s17400g [Popu... 609 0.0
ref|XP_006494587.1| PREDICTED: pentatricopeptide repeat-containi... 609 0.0
ref|XP_010255160.1| PREDICTED: pentatricopeptide repeat-containi... 598 0.0
ref|XP_008236179.1| PREDICTED: pentatricopeptide repeat-containi... 587 0.0
>emb|CDO96965.1| unnamed protein product [Coffea canephora]
Length = 1101
Score = 1246 bits (3224), Expect = 0.0
Identities = 631/751 (84%), Positives = 664/751 (88%)
Frame = -1
Query: 3730 PRCHCSPLLRKEIFGTGHNLRPSGLRFRRQCRKPGFRFQFHSRNFLLRXXXXXXXXXXXX 3551
P CHC+PLLRKE G+GHNLRP GLRFRRQCRK GFRF FHSRNFLLR
Sbjct: 19 PGCHCAPLLRKEFLGSGHNLRPPGLRFRRQCRKLGFRFHFHSRNFLLRASLDSHSVVLVV 78
Query: 3550 XXXXXXXXXXVLVFHSYSRRRNNAQDKQMSGKLTHPLLQHIKSRMNYLSAQVFILLNKNI 3371
+LVFHSYS+RRNNAQ QM G+LTHPL QHIKSRM+ LS + FILLN+NI
Sbjct: 79 AVTAVAVSAFILVFHSYSKRRNNAQHNQMPGRLTHPLFQHIKSRMDSLSMEEFILLNRNI 138
Query: 3370 PIDETVDLPTEMSNNTFHHDDIVAETRIDEISVMNGATLATNTSELSICEMTASVVDDSL 3191
PID+ VDLP EMSNNTFHH+D+VAE +D+I+VMNGAT+ATNTSELSICEMTASVV+DSL
Sbjct: 139 PIDKKVDLPIEMSNNTFHHEDVVAEMHLDDINVMNGATIATNTSELSICEMTASVVNDSL 198
Query: 3190 HTRESEGRSVXXXXXXXXXXEAIGSTLNRKSSEMQLERCGHESGSVSKETMLLVEKEPFT 3011
HTRESEG SV E G TLN + SEMQLERC HESGS SKET LL+ K+P
Sbjct: 199 HTRESEGLSVSSLPLLPSEPEVAGPTLNIEPSEMQLERCEHESGSDSKETKLLLVKKPHI 258
Query: 3010 ASFFPVNVQSRVTEFGRLDCESLTEGEQVEPDLIHREDLYTFYEAPMAKLNGLGAQSSGI 2831
ASFFPVNVQSRVTEFGRLD E LTEG+Q++PDL HREDLYTFYEAPMAKLNGLGA SSGI
Sbjct: 259 ASFFPVNVQSRVTEFGRLDHEILTEGQQIKPDLSHREDLYTFYEAPMAKLNGLGALSSGI 318
Query: 2830 SLHKNGNSSLFKASVVDGEQFLRQQLSHHAEKTEGHEKRHVGYYNNGSSHRKKDMGKRKE 2651
SLHKNGNSSLFKASVVDGEQFLRQQLSH AE+TEGHEKRHV YYNNGSSH K+DMGKRKE
Sbjct: 319 SLHKNGNSSLFKASVVDGEQFLRQQLSHRAEETEGHEKRHVSYYNNGSSHWKEDMGKRKE 378
Query: 2650 SPAYKDSAKLHEHRSKILFPTHNLEGKHTHDRNRLPQPFSGYSKLLRDGRLNDCIEMLED 2471
SPAYKD+AKLHE+RSK L PTHNL+GKH HDRNR PQ F GYSKLLRDGRLNDCIEMLED
Sbjct: 379 SPAYKDNAKLHENRSKSLSPTHNLKGKHMHDRNRSPQLFGGYSKLLRDGRLNDCIEMLED 438
Query: 2470 MESKGLLDMDKVYHAGFFKACKSQKAVKEAFRFTKLIPNPTLSTFNMLMSVCASSQDSEG 2291
MESKGLLDMDKVYHAGFFKACK+QKAVKEAFRFTKLIPNPTLSTFNMLMSVCA +QDSEG
Sbjct: 439 MESKGLLDMDKVYHAGFFKACKTQKAVKEAFRFTKLIPNPTLSTFNMLMSVCARAQDSEG 498
Query: 2290 AFEVLPLVQEARLTADCKLYTTLISTCARAGKVDAMFKVFHEMVNAGVEPNVHTYGALID 2111
AFEVL LVQEARL ADCKLYTTLISTCARAGKVD MFKVFHEMVNAGVEPNVHTYGALID
Sbjct: 499 AFEVLQLVQEARLKADCKLYTTLISTCARAGKVDTMFKVFHEMVNAGVEPNVHTYGALID 558
Query: 2110 GCAKAGQVAKAFGAYGIMQSKNVKPDRVVFNALITACGESGAVDRAFDVLAEMMSEIHPI 1931
GCAKAGQVAKAFGAYGIMQSKNVKPDRVVFNALITACGESGAVDRAFDVLAEM SEI PI
Sbjct: 559 GCAKAGQVAKAFGAYGIMQSKNVKPDRVVFNALITACGESGAVDRAFDVLAEMRSEIRPI 618
Query: 1930 DPDHITVGALMKACIRAGQIDRAREVYKMLDKYNIKGTPEVYTIAVNSCSQKGDWEFACA 1751
DPDHITVGAL+KACIR+GQIDRAREVYKMLD+YNIKGTPEVYTIAVN SQ DWEFACA
Sbjct: 619 DPDHITVGALIKACIRSGQIDRAREVYKMLDEYNIKGTPEVYTIAVN--SQNADWEFACA 676
Query: 1750 VYSDMTRRGVAPDEMFISALIDVAGHAGNLDAAFEILKVARAKGIPSGSISYSSLMGACS 1571
VYSDMT RGVAPDEMFISALIDVAGHAGNLDAAFEILKVARA GIPSGSISYSSLMGACS
Sbjct: 677 VYSDMTIRGVAPDEMFISALIDVAGHAGNLDAAFEILKVARANGIPSGSISYSSLMGACS 736
Query: 1570 NAKDWQKALLLYEDIKDINLKPTVSMMNALV 1478
NAKDWQKAL LYE+IKDINLKPTVSMMNALV
Sbjct: 737 NAKDWQKALQLYEEIKDINLKPTVSMMNALV 767
Score = 606 bits (1562), Expect = e-170
Identities = 311/331 (93%), Positives = 320/331 (96%)
Frame = -2
Query: 1479 CEADQLQKATEVLFEMKRQGLSPNTITYSILLVASEKKDDLEVGLKLLSQAKKDGVAPNL 1300
CEADQLQKATEVLFEMK +GL PNTITYSILLVASEKKDDLEVGL L SQAKKDGVAPNL
Sbjct: 771 CEADQLQKATEVLFEMKMRGLCPNTITYSILLVASEKKDDLEVGLMLFSQAKKDGVAPNL 830
Query: 1299 VMCRCLIGMCLRRFQQACALGEPVFSLKAGYLQLDSKWTSLALMVYREAVVAGVAPTVEE 1120
VMCRCLIGMCLRRFQQACALGEPVFSLK+GYLQLDSKWTSLALMVYREAVVAGVAPTV+E
Sbjct: 831 VMCRCLIGMCLRRFQQACALGEPVFSLKSGYLQLDSKWTSLALMVYREAVVAGVAPTVDE 890
Query: 1119 LSQVLGCLQLPRDGSLRRRLIENLGVSTDTSKGSKLCSLVDGFGEYDPRAFSLLEEAASL 940
LSQVLGCLQLP D SLR RLIENLGVSTDTSKGSKL SLVDGFGEYDPRAFSLLEEAASL
Sbjct: 891 LSQVLGCLQLPHDVSLRNRLIENLGVSTDTSKGSKLFSLVDGFGEYDPRAFSLLEEAASL 950
Query: 939 GIVPAVSLKRSPIIVDVRNLPTHAAEVYILTVLKGLKHRLAAGVRLPNLSILLPLEKTQI 760
GIVPAVSLKRSPIIVDVRNLP HAAEVYILTVLKGLKHRLAAGV+LPNLSILLPLEKTQI
Sbjct: 951 GIVPAVSLKRSPIIVDVRNLPIHAAEVYILTVLKGLKHRLAAGVKLPNLSILLPLEKTQI 1010
Query: 759 QTPSGEKTIKVAGRISQAVAAVLRRLGLHFLGNESHGKVRINGVALKKWFQPKLDSPFSG 580
QTPSGEKTIKVAGRISQAVAA+LRRLGLHF+GNESHGKVRING A+KKWFQPKLDSPFSG
Sbjct: 1011 QTPSGEKTIKVAGRISQAVAALLRRLGLHFVGNESHGKVRINGGAVKKWFQPKLDSPFSG 1070
Query: 579 KPTDLSSFQRRLGKGIIYQQRNIRTGNLSLD 487
KPTD SSFQRRLGKGI+YQQRNIRTG+LSLD
Sbjct: 1071 KPTDRSSFQRRLGKGIMYQQRNIRTGDLSLD 1101
>ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic [Vitis vinifera]
Length = 1115
Score = 659 bits (1700), Expect(2) = 0.0
Identities = 396/764 (51%), Positives = 483/764 (63%), Gaps = 21/764 (2%)
Frame = -1
Query: 3706 LRKEIFGTGHNLRPSGLRFRRQCRKPGFRFQFHSRNFLLRXXXXXXXXXXXXXXXXXXXX 3527
LR+E G GHNLRP GLR ++C+ FR Q SR +
Sbjct: 33 LRREFLGCGHNLRPPGLRSPKKCKNIRFRIQSPSRFYF---KASLGSQPVLVVVAVAAVF 89
Query: 3526 XXVLVFHSYSRRRNNAQDKQMSGKLTHPLLQHIKSRMNYLSAQVFIL---LNKNIPIDE- 3359
+VF SYSRRR N+ +++SG + Q + MN + L+K E
Sbjct: 90 AFSVVFLSYSRRRKNS--REVSGPSGFAISQLSRDVMNQFMESAILGFGDLHKETSEKES 147
Query: 3358 --TVDLPTEMSNNTFHHDDIVAETRIDEISVMNGATLATNTSELSICEMTASVVDDSLHT 3185
T+D+ E+S H E EI++M T TNTSE S ++ +S + +
Sbjct: 148 RATMDIVEEVS-----HASKDKEAPWQEIALMQEETHVTNTSESSRLDVLSSNAKNCVSV 202
Query: 3184 RESEGRSVXXXXXXXXXXEAIGSTL-NRKSSEMQLERCGHESGSVSKETMLLVEKEPFTA 3008
RE+E + + + E+QLE E+ + +V+ + A
Sbjct: 203 RETEEAGPSILPPLLSESGLLQPLVFATEMPELQLEERQMETEFGYDLSTPVVQTKSIAA 262
Query: 3007 SFFPV----NVQSRVTEFGRLDCES-LTEGEQVEPDLIHREDLYTFYEA------PMAKL 2861
S + V R GR ES + + D I RE+LYTFYEA PM
Sbjct: 263 SVPDIIALEGVNERKNRGGRPGEESEIISFTGIFRDTI-REELYTFYEAKQSVMKPMPNF 321
Query: 2860 NGLGAQSSGISLHKNGNSSLFKASVVDGEQFLRQQLSHH-AEKTEGHEKRHVGYYNNGSS 2684
NG+ +S SL S + E L Q SH A+ EG K + Y GSS
Sbjct: 322 NGIKTLASNASLLDGNGVSFQMRNATSKEAELSAQNSHSSADYVEG--KMSLSCYKEGSS 379
Query: 2683 HRKKDMGKRKESPAYKDSA--KLHEHRSKILFPTHNLEGKHTHDRNRLPQPFSGYSKLLR 2510
++ D+ K K P K+ L +HR+ FP N G ++ + FS Y++LL
Sbjct: 380 GKRNDLVKGKGFPRDKNGRLPPLSDHRNLSQFPLSN--GMTVKEKYHDSEKFSAYNRLLS 437
Query: 2509 DGRLNDCIEMLEDMESKGLLDMDKVYHAGFFKACKSQKAVKEAFRFTKLIPNPTLSTFNM 2330
+GRL+DCI++LEDME GLLDMDKVYHA FFK C+SQKAV EAFRF KLIP PTLSTFNM
Sbjct: 438 EGRLSDCIQLLEDMEKMGLLDMDKVYHAKFFKICRSQKAVTEAFRFAKLIPTPTLSTFNM 497
Query: 2329 LMSVCASSQDSEGAFEVLPLVQEARLTADCKLYTTLISTCARAGKVDAMFKVFHEMVNAG 2150
LMSVCA+SQDS GAF+VL LV+EA L ADCKLYTTLISTCA++GKVDAMF+VFHEMVNA
Sbjct: 498 LMSVCATSQDSAGAFQVLQLVREAGLKADCKLYTTLISTCAKSGKVDAMFEVFHEMVNAE 557
Query: 2149 VEPNVHTYGALIDGCAKAGQVAKAFGAYGIMQSKNVKPDRVVFNALITACGESGAVDRAF 1970
VEPNVHTYGALIDGC +AGQVAKAFGAYGIM+SK V+PDRVVFNALITACG+SGAVDRAF
Sbjct: 558 VEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVEPDRVVFNALITACGQSGAVDRAF 617
Query: 1969 DVLAEMMSEIHPIDPDHITVGALMKACIRAGQIDRAREVYKMLDKYNIKGTPEVYTIAVN 1790
DVLAEM +E PIDPDHITVGAL+KAC AGQ+DRAREVYKM+D+YNIKGTPEVYTIAV+
Sbjct: 618 DVLAEMRAETQPIDPDHITVGALIKACTNAGQVDRAREVYKMIDQYNIKGTPEVYTIAVS 677
Query: 1789 SCSQKGDWEFACAVYSDMTRRGVAPDEMFISALIDVAGHAGNLDAAFEILKVARAKGIPS 1610
S SQ GDWEFA +VY+DMTR+GV PDEMF+SALIDVAGHAG LDAAFE+++ AR +GIP
Sbjct: 678 SHSQIGDWEFAYSVYTDMTRKGVVPDEMFLSALIDVAGHAGKLDAAFEVIQEARIQGIPL 737
Query: 1609 GSISYSSLMGACSNAKDWQKALLLYEDIKDINLKPTVSMMNALV 1478
G +SYSSLMGACSNAK+WQKAL LY DIK + L PTVS MNAL+
Sbjct: 738 GIVSYSSLMGACSNAKNWQKALELYVDIKSMKLNPTVSTMNALI 781
Score = 479 bits (1232), Expect(2) = 0.0
Identities = 241/331 (72%), Positives = 275/331 (83%)
Frame = -2
Query: 1479 CEADQLQKATEVLFEMKRQGLSPNTITYSILLVASEKKDDLEVGLKLLSQAKKDGVAPNL 1300
CE +QL+KA EVL +MKR GL PNTITYSILLVASEKKDD++VGL +LSQA+KD VAPNL
Sbjct: 785 CEGEQLEKAMEVLSDMKRAGLCPNTITYSILLVASEKKDDIDVGLMILSQARKDSVAPNL 844
Query: 1299 VMCRCLIGMCLRRFQQACALGEPVFSLKAGYLQLDSKWTSLALMVYREAVVAGVAPTVEE 1120
VMCRCL+GMCLRRF++ACALGEPV S +G Q+D+KWTS ALMVYRE V AGV PT+E
Sbjct: 845 VMCRCLVGMCLRRFEKACALGEPVLSFNSGRPQIDNKWTSSALMVYRETVSAGVIPTMEL 904
Query: 1119 LSQVLGCLQLPRDGSLRRRLIENLGVSTDTSKGSKLCSLVDGFGEYDPRAFSLLEEAASL 940
LSQVLGCLQ PRD SLR RLIENLGVS D S+ S LCSL+DGFGEYD RAFSLLEEAASL
Sbjct: 905 LSQVLGCLQFPRDVSLRNRLIENLGVSADASRRSNLCSLIDGFGEYDSRAFSLLEEAASL 964
Query: 939 GIVPAVSLKRSPIIVDVRNLPTHAAEVYILTVLKGLKHRLAAGVRLPNLSILLPLEKTQI 760
G+V VS K+SP+IVD R L AEVY+LTVLKGLKHRLAAG +LP+++ILLP E TQ+
Sbjct: 965 GVVSCVSFKKSPVIVDTRRLQIRIAEVYLLTVLKGLKHRLAAGAKLPSMTILLPTETTQV 1024
Query: 759 QTPSGEKTIKVAGRISQAVAAVLRRLGLHFLGNESHGKVRINGVALKKWFQPKLDSPFSG 580
P GEK I +AGRISQAVA++LRRLGL + GNES GK+RING+A ++WFQPKL PFSG
Sbjct: 1025 LAPKGEKAINLAGRISQAVASMLRRLGLPYQGNESRGKIRINGLATRRWFQPKLAGPFSG 1084
Query: 579 KPTDLSSFQRRLGKGIIYQQRNIRTGNLSLD 487
K +LSS Q RLG GI QQR IRTGNLSLD
Sbjct: 1085 KVDELSSSQSRLGTGISLQQRKIRTGNLSLD 1115
Score = 105 bits (261), Expect = 4e-19
Identities = 91/364 (25%), Positives = 147/364 (40%), Gaps = 40/364 (10%)
Frame = -1
Query: 2485 EMLEDMESKGLLDMDKVYHAGFFKACKSQK--AVKEAFR-FTKLIPNPTLSTFNMLMSVC 2315
++L+ + GL K+Y KS K A+ E F P + T+ L+ C
Sbjct: 513 QVLQLVREAGLKADCKLYTTLISTCAKSGKVDAMFEVFHEMVNAEVEPNVHTYGALIDGC 572
Query: 2314 ASSQDSEGAFEVLPLVQEARLTADCKLYTTLISTCARAGKVDAMFKVFHEM--VNAGVEP 2141
+ AF +++ ++ D ++ LI+ C ++G VD F V EM ++P
Sbjct: 573 GRAGQVAKAFGAYGIMRSKKVEPDRVVFNALITACGQSGAVDRAFDVLAEMRAETQPIDP 632
Query: 2140 NVHTYGALIDGCAKAGQVAKA-----------------------------------FGAY 2066
+ T GALI C AGQV +A + Y
Sbjct: 633 DHITVGALIKACTNAGQVDRAREVYKMIDQYNIKGTPEVYTIAVSSHSQIGDWEFAYSVY 692
Query: 2065 GIMQSKNVKPDRVVFNALITACGESGAVDRAFDVLAEMMSEIHPIDPDHITVGALMKACI 1886
M K V PD + +ALI G +G +D AF+V+ E + I I ++ +LM AC
Sbjct: 693 TDMTRKGVVPDEMFLSALIDVAGHAGKLDAAFEVIQE--ARIQGIPLGIVSYSSLMGACS 750
Query: 1885 RAGQIDRAREVYKMLDKYNIKGTPEVYTIAVNSCSQKGDWEFACAVYSDMTRRGVAPDEM 1706
A +A E+Y + + T + + + E A V SDM R G+ P+ +
Sbjct: 751 NAKNWQKALELYVDIKSMKLNPTVSTMNALITALCEGEQLEKAMEVLSDMKRAGLCPNTI 810
Query: 1705 FISALIDVAGHAGNLDAAFEILKVARAKGIPSGSISYSSLMGACSNAKDWQKALLLYEDI 1526
S L+ + ++D IL AR + + L+G C + ++KA L E +
Sbjct: 811 TYSILLVASEKKDDIDVGLMILSQARKDSVAPNLVMCRCLVGMC--LRRFEKACALGEPV 868
Query: 1525 KDIN 1514
N
Sbjct: 869 LSFN 872
Score = 78.2 bits (191), Expect = 6e-11
Identities = 81/308 (26%), Positives = 129/308 (41%), Gaps = 4/308 (1%)
Frame = -1
Query: 2377 RFTKLIPNPTLSTFNML--MSVCASSQDSEGAFEVLPLVQEARLTADCKLYTTLISTCAR 2204
R L + LS F + M+V DSE L+ E RL+ DC L+ +
Sbjct: 398 RLPPLSDHRNLSQFPLSNGMTVKEKYHDSEKFSAYNRLLSEGRLS-DC---IQLLEDMEK 453
Query: 2203 AGKVDAMFKVFHEMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMQSKNVKPDRVV 2024
G +D M KV+H C V +AF ++ + P
Sbjct: 454 MGLLD-MDKVYH--------------AKFFKICRSQKAVTEAFRFAKLIPT----PTLST 494
Query: 2023 FNALITACGESGAVDRAFDVLAEMMSEIHPIDPDHITVGALMKACIRAGQIDRAREVYKM 1844
FN L++ C S AF VL +++ E + D L+ C ++G++D EV+
Sbjct: 495 FNMLMSVCATSQDSAGAFQVL-QLVREAG-LKADCKLYTTLISTCAKSGKVDAMFEVFHE 552
Query: 1843 LDKYNIKGTPEVYTIAVNSCSQKGDWEFACAVYSDMTRRGVAPDEMFISALIDVAGHAGN 1664
+ ++ Y ++ C + G A Y M + V PD + +ALI G +G
Sbjct: 553 MVNAEVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVEPDRVVFNALITACGQSGA 612
Query: 1663 LDAAFEILKVARAKGIP--SGSISYSSLMGACSNAKDWQKALLLYEDIKDINLKPTVSMM 1490
+D AF++L RA+ P I+ +L+ AC+NA +A +Y+ I N+K T +
Sbjct: 613 VDRAFDVLAEMRAETQPIDPDHITVGALIKACTNAGQVDRAREVYKMIDQYNIKGTPEVY 672
Query: 1489 NALV*SGS 1466
V S S
Sbjct: 673 TIAVSSHS 680
Score = 75.1 bits (183), Expect = 5e-10
Identities = 64/260 (24%), Positives = 113/260 (43%), Gaps = 5/260 (1%)
Frame = -1
Query: 2512 RDGRLNDCIEMLEDMESKGL-LDMDKVYHAGFFKACKSQKAVKEAFRFTKLIPNPTLSTF 2336
+ G ++ ++L +M ++ +D D + KAC + V A K+I +
Sbjct: 609 QSGAVDRAFDVLAEMRAETQPIDPDHITVGALIKACTNAGQVDRAREVYKMIDQYNIKGT 668
Query: 2335 NMLMSVCASSQ----DSEGAFEVLPLVQEARLTADCKLYTTLISTCARAGKVDAMFKVFH 2168
+ ++ SS D E A+ V + + D + LI AGK+DA F+V
Sbjct: 669 PEVYTIAVSSHSQIGDWEFAYSVYTDMTRKGVVPDEMFLSALIDVAGHAGKLDAAFEVIQ 728
Query: 2167 EMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMQSKNVKPDRVVFNALITACGESG 1988
E G+ + +Y +L+ C+ A KA Y ++S + P NALITA E
Sbjct: 729 EARIQGIPLGIVSYSSLMGACSNAKNWQKALELYVDIKSMKLNPTVSTMNALITALCEGE 788
Query: 1987 AVDRAFDVLAEMMSEIHPIDPDHITVGALMKACIRAGQIDRAREVYKMLDKYNIKGTPEV 1808
+++A +VL++M + P+ IT L+ A + ID + K ++ +
Sbjct: 789 QLEKAMEVLSDMKRA--GLCPNTITYSILLVASEKKDDIDVGLMILSQARKDSVAPNLVM 846
Query: 1807 YTIAVNSCSQKGDWEFACAV 1748
V C ++ +E ACA+
Sbjct: 847 CRCLVGMCLRR--FEKACAL 864
>ref|XP_009799357.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic isoform X1 [Nicotiana sylvestris]
Length = 1095
Score = 635 bits (1638), Expect(2) = 0.0
Identities = 385/780 (49%), Positives = 483/780 (61%), Gaps = 33/780 (4%)
Frame = -1
Query: 3718 CSPLLRKEI-------FGTGHN-LR-PSGLRFRRQCRKPGFRFQFHSRNFLLRXXXXXXX 3566
CSP+ I FG+ HN LR P LR RR+CR GF+F HS F+LR
Sbjct: 17 CSPISSSLIPRRHQCFFGSSHNNLRSPVLLRSRRKCRNIGFQFGAHSSPFVLRASLDSQS 76
Query: 3565 XXXXXXXXXXXXXXXVLVFHSYSRRRNNAQDKQMSGKLTHPLLQHIKSRMNYLSAQVFIL 3386
++F +S+R NA K++S +LT L + I+ MN+ VF L
Sbjct: 77 VVVVAAVVTISALT--IIFFEFSKR--NANLKEISAELTLALRRQIRHVMNWFPRHVFAL 132
Query: 3385 LNKNIPIDETVDLP-TEMSNNTFHHDDIVAETRIDEISVMNGATLATNTSELSICEMTAS 3209
+N I +++V+ TE+S + +D + ++ +M T+ TN E + AS
Sbjct: 133 IN--IQEEKSVETSMTEVSKVSNELEDAGTDVQLGGAYLMQ--TVITNKIESADANQMAS 188
Query: 3208 VVDDSLHTRESEGRSVXXXXXXXXXXEAIGSTLNRKSSEMQLERCGHESGSVSKETMLLV 3029
SL T + G + + +LN E H G+ + +
Sbjct: 189 SSGGSL-TLGAPGSNTHAESDVVPSSSFVAESLNNYLQE-------HLQGTKTSNRLTTE 240
Query: 3028 E-KEPFTASFFP-VNVQSRVTEFGRLDCESLTEG------EQVEPDLIH----------R 2903
E + FP +N+ + E + D + +G + V D + R
Sbjct: 241 EVSSEHSVGLFPAINIDKGIEETKKTDHALMADGGLKIAHKHVAEDEVSIHNLIFRDSAR 300
Query: 2902 EDLYTFYEAPMAKLNGLGAQSSGISLHKNGN-----SSLFKASVVDGEQFLRQQLSHHAE 2738
++LY+F+EA LNG A +S H +G S K S + E F
Sbjct: 301 KELYSFFEASTKSLNGQKALTS----HASGERISVFSHTSKVSSIQAEDF---------- 346
Query: 2737 KTEGHEKRHVGYYNNGSSHRKKDMGKRKESPAYKDSAKLHEHRSKILFPTHNLEGKHTHD 2558
EK G Y G + K D GKRK K+ + L ++ + F N +G D
Sbjct: 347 ----KEKSPHGCYKEGPFNNK-DFGKRKNHFTKKEKSILLDNGTTKQFQIPNPKGIQVCD 401
Query: 2557 RNRLPQPFSGYSKLLRDGRLNDCIEMLEDMESKGLLDMDKVYHAGFFKACKSQKAVKEAF 2378
+ F Y + LR+GRL DCIEML++ME G L+MDKVYHAGFF+ACKSQKAVKEAF
Sbjct: 402 GPQPSDQFRAYRRFLREGRLMDCIEMLDNMERHGSLNMDKVYHAGFFQACKSQKAVKEAF 461
Query: 2377 RFTKLIPNPTLSTFNMLMSVCASSQDSEGAFEVLPLVQEARLTADCKLYTTLISTCARAG 2198
RFTKLI NPTLSTFNML+SVCA+S+D EGAF V+ LV+E L DCKLYTTLISTCA++G
Sbjct: 462 RFTKLIQNPTLSTFNMLLSVCATSRDLEGAFRVVQLVRETGLKPDCKLYTTLISTCAKSG 521
Query: 2197 KVDAMFKVFHEMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMQSKNVKPDRVVFN 2018
KVD MF+VFHEMVNAGVEPNV+TYGALIDGCAKAGQVAKAFGAYGIM+SKNVKPDRVVFN
Sbjct: 522 KVDTMFEVFHEMVNAGVEPNVNTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFN 581
Query: 2017 ALITACGESGAVDRAFDVLAEMMSEIHPIDPDHITVGALMKACIRAGQIDRAREVYKMLD 1838
ALITACG+SGAVDRAFDVL+EM +E PI+PD ITVGALMKAC AGQ+DRA +VY+M+D
Sbjct: 582 ALITACGQSGAVDRAFDVLSEMKAEARPIEPDQITVGALMKACANAGQVDRALDVYRMID 641
Query: 1837 KYNIKGTPEVYTIAVNSCSQKGDWEFACAVYSDMTRRGVAPDEMFISALIDVAGHAGNLD 1658
KY+IKGT EVYTIAVN CSQ G+W+FA ++Y DMTR+GV PDEMFISAL+DVAGHAG LD
Sbjct: 642 KYDIKGTAEVYTIAVNCCSQNGNWDFARSIYDDMTRKGVYPDEMFISALVDVAGHAGKLD 701
Query: 1657 AAFEILKVARAKGIPSGSISYSSLMGACSNAKDWQKALLLYEDIKDINLKPTVSMMNALV 1478
AAF++L+ AR KGI GS+SYSSLMGACSNAK+WQKAL LYED+K + LKPTVSMMNALV
Sbjct: 702 AAFDVLEEARTKGINVGSMSYSSLMGACSNAKNWQKALELYEDVKGVKLKPTVSMMNALV 761
Score = 494 bits (1271), Expect(2) = 0.0
Identities = 243/331 (73%), Positives = 283/331 (85%)
Frame = -2
Query: 1479 CEADQLQKATEVLFEMKRQGLSPNTITYSILLVASEKKDDLEVGLKLLSQAKKDGVAPNL 1300
C+ADQ QKA E+ EMKR L PNTITYS LLVASEKKDDL++GL LLS AKKDGV+PNL
Sbjct: 765 CDADQYQKALEIFSEMKRVDLCPNTITYSTLLVASEKKDDLDIGLMLLSHAKKDGVSPNL 824
Query: 1299 VMCRCLIGMCLRRFQQACALGEPVFSLKAGYLQLDSKWTSLALMVYREAVVAGVAPTVEE 1120
VMCRCL+ MCLRRFQ+AC LGEPV S +G LQLDSKWTSLALM+YRE + AGV PT++E
Sbjct: 825 VMCRCLLAMCLRRFQKACTLGEPVLSYNSGRLQLDSKWTSLALMIYRETIAAGVVPTMDE 884
Query: 1119 LSQVLGCLQLPRDGSLRRRLIENLGVSTDTSKGSKLCSLVDGFGEYDPRAFSLLEEAASL 940
LS VLGCLQLPRD SL+ RLIENLG++ +TSKGS LCSL+DGFGEYD RAFSLLEEAASL
Sbjct: 885 LSLVLGCLQLPRDASLKERLIENLGLTVETSKGSNLCSLIDGFGEYDSRAFSLLEEAASL 944
Query: 939 GIVPAVSLKRSPIIVDVRNLPTHAAEVYILTVLKGLKHRLAAGVRLPNLSILLPLEKTQI 760
G +P SLK +P+ VD RNL H A+VY+LTVLKGLKHRLAAG ++PN+SILLP+E++ I
Sbjct: 945 GTIPLTSLKGNPVAVDARNLHIHTAQVYLLTVLKGLKHRLAAGAKIPNISILLPVEQSHI 1004
Query: 759 QTPSGEKTIKVAGRISQAVAAVLRRLGLHFLGNESHGKVRINGVALKKWFQPKLDSPFSG 580
QTP+GEKTIK+AGRI++AVAA+LRRLGL + GNES+GK+RINGV +KKWFQPKL+SPFS
Sbjct: 1005 QTPTGEKTIKIAGRINRAVAALLRRLGLPYQGNESYGKIRINGVIVKKWFQPKLESPFSW 1064
Query: 579 KPTDLSSFQRRLGKGIIYQQRNIRTGNLSLD 487
+ TDLS RL KGI +QQRNIR GNLSLD
Sbjct: 1065 EQTDLSFSPTRLRKGISHQQRNIRAGNLSLD 1095
Score = 67.0 bits (162), Expect = 1e-07
Identities = 47/220 (21%), Positives = 98/220 (44%), Gaps = 5/220 (2%)
Frame = -1
Query: 2512 RDGRLNDCIEMLEDMESKGL-LDMDKVYHAGFFKACKSQKAVKEAFRFTKLIPN----PT 2348
+ G ++ ++L +M+++ ++ D++ KAC + V A ++I T
Sbjct: 589 QSGAVDRAFDVLSEMKAEARPIEPDQITVGALMKACANAGQVDRALDVYRMIDKYDIKGT 648
Query: 2347 LSTFNMLMSVCASSQDSEGAFEVLPLVQEARLTADCKLYTTLISTCARAGKVDAMFKVFH 2168
+ + ++ C+ + + + A + + + D + L+ AGK+DA F V
Sbjct: 649 AEVYTIAVNCCSQNGNWDFARSIYDDMTRKGVYPDEMFISALVDVAGHAGKLDAAFDVLE 708
Query: 2167 EMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMQSKNVKPDRVVFNALITACGESG 1988
E G+ +Y +L+ C+ A KA Y ++ +KP + NAL+TA ++
Sbjct: 709 EARTKGINVGSMSYSSLMGACSNAKNWQKALELYEDVKGVKLKPTVSMMNALVTALCDAD 768
Query: 1987 AVDRAFDVLAEMMSEIHPIDPDHITVGALMKACIRAGQID 1868
+A ++ +EM + P+ IT L+ A + +D
Sbjct: 769 QYQKALEIFSEMKRV--DLCPNTITYSTLLVASEKKDDLD 806
>ref|XP_009589920.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic isoform X1 [Nicotiana tomentosiformis]
Length = 1094
Score = 635 bits (1638), Expect(2) = 0.0
Identities = 379/757 (50%), Positives = 476/757 (62%), Gaps = 23/757 (3%)
Frame = -1
Query: 3679 HNLRPSGL-RFRRQCRKPGFRFQFHSRNFLLRXXXXXXXXXXXXXXXXXXXXXXVLVFHS 3503
+NLR GL R RR+CR GF+F HS F+LR ++F
Sbjct: 38 NNLRSPGLLRLRRKCRNIGFQFSAHSSRFVLRASLDSQSVVVVAAVVTISALT--IIFFE 95
Query: 3502 YSRRRNNAQDKQMSGKLTHPLLQHIKSRMNYLSAQVFILLNKNIPIDETVDLPT-EMSNN 3326
+S+R NA K++S +LT L + I+ MN+ VF L+N I +++++ P E+S
Sbjct: 96 FSKR--NANIKEISAELTLALRRQIRHVMNWFPRHVFALIN--IQEEKSIETPMKEVSKV 151
Query: 3325 TFHHDDIVAETRIDEISVMNGATLATNTSELSICEMTASVVDDSLHTRESEGRSVXXXXX 3146
+ H++ + ++ +M T+ TN E + AS SL T + G +
Sbjct: 152 SNEHENGGTDVQLGGTYLMQ--TVITNKIESADANQMASSSGGSL-TLGAPGSNTHAESD 208
Query: 3145 XXXXXEAIGSTLNRKSSEMQLERCGHESGSVSKETMLLVEKEPFTASFFPVNVQSRVTEF 2966
I S+ + L+ + + ++ T V E F +N+ + E
Sbjct: 209 ------VIPSSFVAELHNNYLQEHLQGTKTSNRLTTEEVSSEHSVGLFPAINIDKGIEET 262
Query: 2965 GRLDCESLTEG------EQVEPDLIH----------REDLYTFYEAPMAKLNGLGAQSSG 2834
+ D + +G + V D + R++LY+F+EA LNG A +S
Sbjct: 263 KKTDHALMVDGGLKIAHKHVAEDEVSIHNLIFRDSARKELYSFFEASTKNLNGQKALTS- 321
Query: 2833 ISLHKNGN-----SSLFKASVVDGEQFLRQQLSHHAEKTEGHEKRHVGYYNNGSSHRKKD 2669
H +G S K S + E F EKR G Y G + K D
Sbjct: 322 ---HASGERISVFSHTSKVSSIQAEDF--------------KEKRPHGCYKEGPFNNK-D 363
Query: 2668 MGKRKESPAYKDSAKLHEHRSKILFPTHNLEGKHTHDRNRLPQPFSGYSKLLRDGRLNDC 2489
+GKRK K+ + L ++ + FP N +G D + F Y LR+GRL DC
Sbjct: 364 IGKRKHHFTKKEKSILLDNGNTKQFPIPNPKGIQVCDGPQPSDQFRAYRHFLREGRLMDC 423
Query: 2488 IEMLEDMESKGLLDMDKVYHAGFFKACKSQKAVKEAFRFTKLIPNPTLSTFNMLMSVCAS 2309
IE L++ME G L+MDKVYHAGFF+ACKSQKAVKEAFRFTKLI NPTLSTFNML+SVCAS
Sbjct: 424 IERLDNMERHGSLNMDKVYHAGFFQACKSQKAVKEAFRFTKLIQNPTLSTFNMLLSVCAS 483
Query: 2308 SQDSEGAFEVLPLVQEARLTADCKLYTTLISTCARAGKVDAMFKVFHEMVNAGVEPNVHT 2129
S+D EGAF VL LV+E L DCKLYTTLISTCA+AGKVD MF+VFHEMVNAGVEPNV+T
Sbjct: 484 SRDLEGAFRVLQLVRETGLKPDCKLYTTLISTCAKAGKVDTMFEVFHEMVNAGVEPNVNT 543
Query: 2128 YGALIDGCAKAGQVAKAFGAYGIMQSKNVKPDRVVFNALITACGESGAVDRAFDVLAEMM 1949
YGALIDGCAKAGQVAKAFGAYGIM+SKNVKPDRVVFNALITACG+SGAVDRAFDVL+EM
Sbjct: 544 YGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLSEMK 603
Query: 1948 SEIHPIDPDHITVGALMKACIRAGQIDRAREVYKMLDKYNIKGTPEVYTIAVNSCSQKGD 1769
+E PI+PD IT+GALMKAC AGQ+DRA +VY+M+DKY+IKGT EVYTIAVN CSQ +
Sbjct: 604 AEARPIEPDQITIGALMKACANAGQVDRALDVYRMIDKYDIKGTAEVYTIAVNCCSQNDN 663
Query: 1768 WEFACAVYSDMTRRGVAPDEMFISALIDVAGHAGNLDAAFEILKVARAKGIPSGSISYSS 1589
W+FA ++Y DMTR+GV PDEMFISAL+DVAGHAG LDAAF++L+ AR KGI GS+SYSS
Sbjct: 664 WDFARSIYDDMTRKGVYPDEMFISALVDVAGHAGKLDAAFDVLEEARTKGINVGSMSYSS 723
Query: 1588 LMGACSNAKDWQKALLLYEDIKDINLKPTVSMMNALV 1478
LMGACSNAK+WQKAL LYEDIK + LKPTVSMMNALV
Sbjct: 724 LMGACSNAKNWQKALELYEDIKGVKLKPTVSMMNALV 760
Score = 496 bits (1276), Expect(2) = 0.0
Identities = 243/331 (73%), Positives = 285/331 (86%)
Frame = -2
Query: 1479 CEADQLQKATEVLFEMKRQGLSPNTITYSILLVASEKKDDLEVGLKLLSQAKKDGVAPNL 1300
C+ADQ QKA E+ EMKR L PNTITYS LLVASEKKDDL++GL LLS AKKDGV+PNL
Sbjct: 764 CDADQYQKALEIFSEMKRVDLCPNTITYSTLLVASEKKDDLDIGLMLLSHAKKDGVSPNL 823
Query: 1299 VMCRCLIGMCLRRFQQACALGEPVFSLKAGYLQLDSKWTSLALMVYREAVVAGVAPTVEE 1120
VMCRCL+ MCLRRFQ+AC LGEPV S +G LQLDSKWTSLALM+YRE + AGV PT++E
Sbjct: 824 VMCRCLLAMCLRRFQKACTLGEPVLSYNSGRLQLDSKWTSLALMIYRETIAAGVVPTMDE 883
Query: 1119 LSQVLGCLQLPRDGSLRRRLIENLGVSTDTSKGSKLCSLVDGFGEYDPRAFSLLEEAASL 940
LS VLGCLQLPRD SL+ RLIENLG++ +TSKGS LCSL+DGFGEYDPRAFSLLEEAASL
Sbjct: 884 LSLVLGCLQLPRDASLKERLIENLGLTVETSKGSNLCSLIDGFGEYDPRAFSLLEEAASL 943
Query: 939 GIVPAVSLKRSPIIVDVRNLPTHAAEVYILTVLKGLKHRLAAGVRLPNLSILLPLEKTQI 760
G +P SLK +P+ VD RNL H A+VY+LTVLKGLKHRLAAG ++PN+SILLP+E++ I
Sbjct: 944 GTIPLTSLKGNPVAVDARNLHIHTAQVYLLTVLKGLKHRLAAGAKIPNISILLPVEQSHI 1003
Query: 759 QTPSGEKTIKVAGRISQAVAAVLRRLGLHFLGNESHGKVRINGVALKKWFQPKLDSPFSG 580
QTP+GEKTIK+AGRI++AVAA+LRRLGL + GNES+GK+RINGV +K+WFQPKL+SPFS
Sbjct: 1004 QTPTGEKTIKIAGRINRAVAALLRRLGLPYQGNESYGKIRINGVIVKRWFQPKLESPFSW 1063
Query: 579 KPTDLSSFQRRLGKGIIYQQRNIRTGNLSLD 487
+ T+LS Q RL KGI +QQRNIRT NLSLD
Sbjct: 1064 EQTNLSFSQTRLRKGISHQQRNIRTSNLSLD 1094
Score = 67.8 bits (164), Expect = 8e-08
Identities = 47/220 (21%), Positives = 98/220 (44%), Gaps = 5/220 (2%)
Frame = -1
Query: 2512 RDGRLNDCIEMLEDMESKGL-LDMDKVYHAGFFKACKSQKAVKEAFRFTKLIPN----PT 2348
+ G ++ ++L +M+++ ++ D++ KAC + V A ++I T
Sbjct: 588 QSGAVDRAFDVLSEMKAEARPIEPDQITIGALMKACANAGQVDRALDVYRMIDKYDIKGT 647
Query: 2347 LSTFNMLMSVCASSQDSEGAFEVLPLVQEARLTADCKLYTTLISTCARAGKVDAMFKVFH 2168
+ + ++ C+ + + + A + + + D + L+ AGK+DA F V
Sbjct: 648 AEVYTIAVNCCSQNDNWDFARSIYDDMTRKGVYPDEMFISALVDVAGHAGKLDAAFDVLE 707
Query: 2167 EMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMQSKNVKPDRVVFNALITACGESG 1988
E G+ +Y +L+ C+ A KA Y ++ +KP + NAL+TA ++
Sbjct: 708 EARTKGINVGSMSYSSLMGACSNAKNWQKALELYEDIKGVKLKPTVSMMNALVTALCDAD 767
Query: 1987 AVDRAFDVLAEMMSEIHPIDPDHITVGALMKACIRAGQID 1868
+A ++ +EM + P+ IT L+ A + +D
Sbjct: 768 QYQKALEIFSEMKRV--DLCPNTITYSTLLVASEKKDDLD 805
>emb|CBI37948.3| unnamed protein product [Vitis vinifera]
Length = 1550
Score = 635 bits (1639), Expect(2) = 0.0
Identities = 377/701 (53%), Positives = 459/701 (65%), Gaps = 21/701 (2%)
Frame = -1
Query: 3517 LVFHSYSRRRNNAQDKQMSGKLTHPLLQHIKSRMNYLSAQVFIL---LNKNIPIDE---T 3356
+VF SYSRRR N+ +++SG + Q + MN + L+K E T
Sbjct: 528 VVFLSYSRRRKNS--REVSGPSGFAISQLSRDVMNQFMESAILGFGDLHKETSEKESRAT 585
Query: 3355 VDLPTEMSNNTFHHDDIVAETRIDEISVMNGATLATNTSELSICEMTASVVDDSLHTRES 3176
+D+ E+S H E EI++M T TNTSE S ++ +S + + RE+
Sbjct: 586 MDIVEEVS-----HASKDKEAPWQEIALMQEETHVTNTSESSRLDVLSSNAKNCVSVRET 640
Query: 3175 EGRSVXXXXXXXXXXEAIGSTL-NRKSSEMQLERCGHESGSVSKETMLLVEKEPFTASFF 2999
E + + + E+QLE E+ + +V+ + AS
Sbjct: 641 EEAGPSILPPLLSESGLLQPLVFATEMPELQLEERQMETEFGYDLSTPVVQTKSIAASVP 700
Query: 2998 PV----NVQSRVTEFGRLDCES-LTEGEQVEPDLIHREDLYTFYEA------PMAKLNGL 2852
+ V R GR ES + + D I RE+LYTFYEA PM NG+
Sbjct: 701 DIIALEGVNERKNRGGRPGEESEIISFTGIFRDTI-REELYTFYEAKQSVMKPMPNFNGI 759
Query: 2851 GAQSSGISLHKNGNSSLFKASVVDGEQFLRQQLSHH-AEKTEGHEKRHVGYYNNGSSHRK 2675
+S SL S + E L Q SH A+ EG K + Y GSS ++
Sbjct: 760 KTLASNASLLDGNGVSFQMRNATSKEAELSAQNSHSSADYVEG--KMSLSCYKEGSSGKR 817
Query: 2674 KDMGKRKESPAYKDSA--KLHEHRSKILFPTHNLEGKHTHDRNRLPQPFSGYSKLLRDGR 2501
D+ K K P K+ L +HR+ FP N G ++ + FS Y++LL +GR
Sbjct: 818 NDLVKGKGFPRDKNGRLPPLSDHRNLSQFPLSN--GMTVKEKYHDSEKFSAYNRLLSEGR 875
Query: 2500 LNDCIEMLEDMESKGLLDMDKVYHAGFFKACKSQKAVKEAFRFTKLIPNPTLSTFNMLMS 2321
L+DCI++LEDME GLLDMDKVYHA FFK C+SQKAV EAFRF KLIP PTLSTFNMLMS
Sbjct: 876 LSDCIQLLEDMEKMGLLDMDKVYHAKFFKICRSQKAVTEAFRFAKLIPTPTLSTFNMLMS 935
Query: 2320 VCASSQDSEGAFEVLPLVQEARLTADCKLYTTLISTCARAGKVDAMFKVFHEMVNAGVEP 2141
VCA+SQDS GAF+VL LV+EA L ADCKLYTTLISTCA++GKVDAMF+VFHEMVNA VEP
Sbjct: 936 VCATSQDSAGAFQVLQLVREAGLKADCKLYTTLISTCAKSGKVDAMFEVFHEMVNAEVEP 995
Query: 2140 NVHTYGALIDGCAKAGQVAKAFGAYGIMQSKNVKPDRVVFNALITACGESGAVDRAFDVL 1961
NVHTYGALIDGC +AGQVAKAFGAYGIM+SK V+PDRVVFNALITACG+SGAVDRAFDVL
Sbjct: 996 NVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVEPDRVVFNALITACGQSGAVDRAFDVL 1055
Query: 1960 AEMMSEIHPIDPDHITVGALMKACIRAGQIDRAREVYKMLDKYNIKGTPEVYTIAVNSCS 1781
AEM +E PIDPDHITVGAL+KAC AGQ+DRAREVYKM+D+YNIKGTPEVYTIAV+S S
Sbjct: 1056 AEMRAETQPIDPDHITVGALIKACTNAGQVDRAREVYKMIDQYNIKGTPEVYTIAVSSHS 1115
Query: 1780 QKGDWEFACAVYSDMTRRGVAPDEMFISALIDVAGHAGNLDAAFEILKVARAKGIPSGSI 1601
Q GDWEFA +VY+DMTR+GV PDEMF+SALIDVAGHAG LDAAFE+++ AR +GIP G +
Sbjct: 1116 QIGDWEFAYSVYTDMTRKGVVPDEMFLSALIDVAGHAGKLDAAFEVIQEARIQGIPLGIV 1175
Query: 1600 SYSSLMGACSNAKDWQKALLLYEDIKDINLKPTVSMMNALV 1478
SYSSLMGACSNAK+WQKAL LY DIK + L PTVS MNAL+
Sbjct: 1176 SYSSLMGACSNAKNWQKALELYVDIKSMKLNPTVSTMNALI 1216
Score = 479 bits (1232), Expect(2) = 0.0
Identities = 241/331 (72%), Positives = 275/331 (83%)
Frame = -2
Query: 1479 CEADQLQKATEVLFEMKRQGLSPNTITYSILLVASEKKDDLEVGLKLLSQAKKDGVAPNL 1300
CE +QL+KA EVL +MKR GL PNTITYSILLVASEKKDD++VGL +LSQA+KD VAPNL
Sbjct: 1220 CEGEQLEKAMEVLSDMKRAGLCPNTITYSILLVASEKKDDIDVGLMILSQARKDSVAPNL 1279
Query: 1299 VMCRCLIGMCLRRFQQACALGEPVFSLKAGYLQLDSKWTSLALMVYREAVVAGVAPTVEE 1120
VMCRCL+GMCLRRF++ACALGEPV S +G Q+D+KWTS ALMVYRE V AGV PT+E
Sbjct: 1280 VMCRCLVGMCLRRFEKACALGEPVLSFNSGRPQIDNKWTSSALMVYRETVSAGVIPTMEL 1339
Query: 1119 LSQVLGCLQLPRDGSLRRRLIENLGVSTDTSKGSKLCSLVDGFGEYDPRAFSLLEEAASL 940
LSQVLGCLQ PRD SLR RLIENLGVS D S+ S LCSL+DGFGEYD RAFSLLEEAASL
Sbjct: 1340 LSQVLGCLQFPRDVSLRNRLIENLGVSADASRRSNLCSLIDGFGEYDSRAFSLLEEAASL 1399
Query: 939 GIVPAVSLKRSPIIVDVRNLPTHAAEVYILTVLKGLKHRLAAGVRLPNLSILLPLEKTQI 760
G+V VS K+SP+IVD R L AEVY+LTVLKGLKHRLAAG +LP+++ILLP E TQ+
Sbjct: 1400 GVVSCVSFKKSPVIVDTRRLQIRIAEVYLLTVLKGLKHRLAAGAKLPSMTILLPTETTQV 1459
Query: 759 QTPSGEKTIKVAGRISQAVAAVLRRLGLHFLGNESHGKVRINGVALKKWFQPKLDSPFSG 580
P GEK I +AGRISQAVA++LRRLGL + GNES GK+RING+A ++WFQPKL PFSG
Sbjct: 1460 LAPKGEKAINLAGRISQAVASMLRRLGLPYQGNESRGKIRINGLATRRWFQPKLAGPFSG 1519
Query: 579 KPTDLSSFQRRLGKGIIYQQRNIRTGNLSLD 487
K +LSS Q RLG GI QQR IRTGNLSLD
Sbjct: 1520 KVDELSSSQSRLGTGISLQQRKIRTGNLSLD 1550
Score = 105 bits (261), Expect = 4e-19
Identities = 91/364 (25%), Positives = 147/364 (40%), Gaps = 40/364 (10%)
Frame = -1
Query: 2485 EMLEDMESKGLLDMDKVYHAGFFKACKSQK--AVKEAFR-FTKLIPNPTLSTFNMLMSVC 2315
++L+ + GL K+Y KS K A+ E F P + T+ L+ C
Sbjct: 948 QVLQLVREAGLKADCKLYTTLISTCAKSGKVDAMFEVFHEMVNAEVEPNVHTYGALIDGC 1007
Query: 2314 ASSQDSEGAFEVLPLVQEARLTADCKLYTTLISTCARAGKVDAMFKVFHEM--VNAGVEP 2141
+ AF +++ ++ D ++ LI+ C ++G VD F V EM ++P
Sbjct: 1008 GRAGQVAKAFGAYGIMRSKKVEPDRVVFNALITACGQSGAVDRAFDVLAEMRAETQPIDP 1067
Query: 2140 NVHTYGALIDGCAKAGQVAKA-----------------------------------FGAY 2066
+ T GALI C AGQV +A + Y
Sbjct: 1068 DHITVGALIKACTNAGQVDRAREVYKMIDQYNIKGTPEVYTIAVSSHSQIGDWEFAYSVY 1127
Query: 2065 GIMQSKNVKPDRVVFNALITACGESGAVDRAFDVLAEMMSEIHPIDPDHITVGALMKACI 1886
M K V PD + +ALI G +G +D AF+V+ E + I I ++ +LM AC
Sbjct: 1128 TDMTRKGVVPDEMFLSALIDVAGHAGKLDAAFEVIQE--ARIQGIPLGIVSYSSLMGACS 1185
Query: 1885 RAGQIDRAREVYKMLDKYNIKGTPEVYTIAVNSCSQKGDWEFACAVYSDMTRRGVAPDEM 1706
A +A E+Y + + T + + + E A V SDM R G+ P+ +
Sbjct: 1186 NAKNWQKALELYVDIKSMKLNPTVSTMNALITALCEGEQLEKAMEVLSDMKRAGLCPNTI 1245
Query: 1705 FISALIDVAGHAGNLDAAFEILKVARAKGIPSGSISYSSLMGACSNAKDWQKALLLYEDI 1526
S L+ + ++D IL AR + + L+G C + ++KA L E +
Sbjct: 1246 TYSILLVASEKKDDIDVGLMILSQARKDSVAPNLVMCRCLVGMC--LRRFEKACALGEPV 1303
Query: 1525 KDIN 1514
N
Sbjct: 1304 LSFN 1307
Score = 78.2 bits (191), Expect = 6e-11
Identities = 81/308 (26%), Positives = 129/308 (41%), Gaps = 4/308 (1%)
Frame = -1
Query: 2377 RFTKLIPNPTLSTFNML--MSVCASSQDSEGAFEVLPLVQEARLTADCKLYTTLISTCAR 2204
R L + LS F + M+V DSE L+ E RL+ DC L+ +
Sbjct: 833 RLPPLSDHRNLSQFPLSNGMTVKEKYHDSEKFSAYNRLLSEGRLS-DC---IQLLEDMEK 888
Query: 2203 AGKVDAMFKVFHEMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMQSKNVKPDRVV 2024
G +D M KV+H C V +AF ++ + P
Sbjct: 889 MGLLD-MDKVYH--------------AKFFKICRSQKAVTEAFRFAKLIPT----PTLST 929
Query: 2023 FNALITACGESGAVDRAFDVLAEMMSEIHPIDPDHITVGALMKACIRAGQIDRAREVYKM 1844
FN L++ C S AF VL +++ E + D L+ C ++G++D EV+
Sbjct: 930 FNMLMSVCATSQDSAGAFQVL-QLVREAG-LKADCKLYTTLISTCAKSGKVDAMFEVFHE 987
Query: 1843 LDKYNIKGTPEVYTIAVNSCSQKGDWEFACAVYSDMTRRGVAPDEMFISALIDVAGHAGN 1664
+ ++ Y ++ C + G A Y M + V PD + +ALI G +G
Sbjct: 988 MVNAEVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVEPDRVVFNALITACGQSGA 1047
Query: 1663 LDAAFEILKVARAKGIP--SGSISYSSLMGACSNAKDWQKALLLYEDIKDINLKPTVSMM 1490
+D AF++L RA+ P I+ +L+ AC+NA +A +Y+ I N+K T +
Sbjct: 1048 VDRAFDVLAEMRAETQPIDPDHITVGALIKACTNAGQVDRAREVYKMIDQYNIKGTPEVY 1107
Query: 1489 NALV*SGS 1466
V S S
Sbjct: 1108 TIAVSSHS 1115
Score = 75.1 bits (183), Expect = 5e-10
Identities = 64/260 (24%), Positives = 113/260 (43%), Gaps = 5/260 (1%)
Frame = -1
Query: 2512 RDGRLNDCIEMLEDMESKGL-LDMDKVYHAGFFKACKSQKAVKEAFRFTKLIPNPTLSTF 2336
+ G ++ ++L +M ++ +D D + KAC + V A K+I +
Sbjct: 1044 QSGAVDRAFDVLAEMRAETQPIDPDHITVGALIKACTNAGQVDRAREVYKMIDQYNIKGT 1103
Query: 2335 NMLMSVCASSQ----DSEGAFEVLPLVQEARLTADCKLYTTLISTCARAGKVDAMFKVFH 2168
+ ++ SS D E A+ V + + D + LI AGK+DA F+V
Sbjct: 1104 PEVYTIAVSSHSQIGDWEFAYSVYTDMTRKGVVPDEMFLSALIDVAGHAGKLDAAFEVIQ 1163
Query: 2167 EMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMQSKNVKPDRVVFNALITACGESG 1988
E G+ + +Y +L+ C+ A KA Y ++S + P NALITA E
Sbjct: 1164 EARIQGIPLGIVSYSSLMGACSNAKNWQKALELYVDIKSMKLNPTVSTMNALITALCEGE 1223
Query: 1987 AVDRAFDVLAEMMSEIHPIDPDHITVGALMKACIRAGQIDRAREVYKMLDKYNIKGTPEV 1808
+++A +VL++M + P+ IT L+ A + ID + K ++ +
Sbjct: 1224 QLEKAMEVLSDMKRA--GLCPNTITYSILLVASEKKDDIDVGLMILSQARKDSVAPNLVM 1281
Query: 1807 YTIAVNSCSQKGDWEFACAV 1748
V C ++ +E ACA+
Sbjct: 1282 CRCLVGMCLRR--FEKACAL 1299
>ref|XP_006359636.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic-like isoform X1 [Solanum tuberosum]
Length = 1140
Score = 621 bits (1602), Expect(2) = 0.0
Identities = 387/809 (47%), Positives = 484/809 (59%), Gaps = 62/809 (7%)
Frame = -1
Query: 3718 CSPLL------RKEIFGTGHNLRPSGLRFRRQCRKPGFRFQFHSRNFLLRXXXXXXXXXX 3557
CSP+ R+ + G+ H+LRP GL RR+CR GF+F ++ F+LR
Sbjct: 17 CSPISSSLVPRRQFLSGSTHSLRPPGLHSRRRCRNIGFQFGSNTSRFVLRASLDSQTVVF 76
Query: 3556 XXXXXXXXXXXXVLVFHSYSRRRNNAQDK--QMSGKLTHPLLQHIKSRMNYLSAQVFILL 3383
+VF +S+R NA K ++S +LT L + I+ MN V L+
Sbjct: 77 ASVVTISALT---VVFLEFSKRNTNANAKFKEISAELTLALRRQIRHVMNGFPRHVLALI 133
Query: 3382 NKNIPIDETVDLP----TEMSN-------NTFHHD--DIVAETRIDEI------------ 3278
N I +++V + T++SN + HD D++ + I
Sbjct: 134 N--IQEEKSVKIQMKEVTKVSNEHEDGGTDVLQHDGTDLIQTFVTNNIESVDTNQLAPSS 191
Query: 3277 --------SVMNGATLATNTSELSICEMTASVVDDSLHTRESEGRSVXXXXXXXXXXE-- 3128
SV N T + + E+ + ++L +
Sbjct: 192 NGSLTLGASVPNAHTESDAVPSSFVAELNNIYLQENLRMTKMSNILTTEEVREPEPIAHT 251
Query: 3127 ---AIGSTLNRKSSEMQLERCGHESGSVSKETMLLVEKEPFTASFFPVNVQSRVTEFGRL 2957
A+ S+ +S + L+ HE+ + T V E A F +N+ +R + ++
Sbjct: 252 ESDAVPSSFVEESKNICLQEHLHETKMSNILTTEEVSSERSVALFPAINIDNRPEKTKKM 311
Query: 2956 DCESLT------------EGEQVEPDLIHR----EDLYTFYEAPMAKLNGLGAQSSGISL 2825
D E +T E E +LI R EDLY+F+EA LNG A +S SL
Sbjct: 312 DQELMTKDGCKKAHKFVAEDEVTIHNLIFRDSTREDLYSFFEASSKSLNGQDALTSHASL 371
Query: 2824 HKNGNSSLFKASVVDGEQFLRQQLSHHAEKTEGHEKRHVGYYNNGSSHRKKDMGKRKESP 2645
G + AS V S AE E EKR G Y G + KKD KR +
Sbjct: 372 Q--GIGAFSPASKV---------FSVRAEDFE--EKRSHGCYKEGPFN-KKDFLKRMQHF 417
Query: 2644 AYKDSAKLHEHRSKILFPTHNLEGKHTHDRNRLPQPFSGYSKLLRDGRLNDCIEMLEDME 2465
K+ + L ++ + N +G DR F Y LR+GRL DCIE+LEDM
Sbjct: 418 TNKEKSILPDNGASKQLQIPNPKGIQVCDRPNPSDQFRDYRHFLREGRLMDCIEILEDMG 477
Query: 2464 SKGLLDMDKVYHAGFFKACKSQKAVKEAFRFTKLIPNPTLSTFNMLMSVCASSQDSEGAF 2285
G L+MDKVYHAGFF+ CKSQKAVKEAFRFTKLI NPTLSTFNML++VCASS+D E AF
Sbjct: 478 RHGSLNMDKVYHAGFFQVCKSQKAVKEAFRFTKLIRNPTLSTFNMLLTVCASSRDLERAF 537
Query: 2284 EVLPLVQEARLTADCKLYTTLISTCARAGKVDAMFKVFHEMVNAGVEPNVHTYGALIDGC 2105
+V LV+E L DCKLYTTLISTCA+AGKVD MF+VFHEMVNAGVEPN +TYG LIDGC
Sbjct: 538 QVFQLVRETGLKPDCKLYTTLISTCAKAGKVDTMFEVFHEMVNAGVEPNANTYGTLIDGC 597
Query: 2104 AKAGQVAKAFGAYGIMQSKNVKPDRVVFNALITACGESGAVDRAFDVLAEMMSEIHPIDP 1925
AKAGQVAKAFGAYGIM+SKNVKPDRVVFNALITACG+SGAVDRAFDVL+EM +E PI+P
Sbjct: 598 AKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLSEMKAEARPIEP 657
Query: 1924 DHITVGALMKACIRAGQIDRAREVYKMLDKYNIKGTPEVYTIAVNSCSQKGDWEFACAVY 1745
D IT+GALMKAC AGQ+DRA EVY+M+DK +IKGTPEVYTIAVN CSQ G+WEFA ++Y
Sbjct: 658 DQITIGALMKACANAGQVDRALEVYRMIDKCDIKGTPEVYTIAVNCCSQNGNWEFARSIY 717
Query: 1744 SDMTRRGVAPDEMFISALIDVAGHAGNLDAAFEILKVARAKGIPSGSISYSSLMGACSNA 1565
DM+++GV PDEMFISALIDVAGH G L+AAFE+L+ AR KGI GSISYSSLMGAC NA
Sbjct: 718 DDMSKKGVNPDEMFISALIDVAGHTGKLEAAFEVLEEARTKGINLGSISYSSLMGACCNA 777
Query: 1564 KDWQKALLLYEDIKDINLKPTVSMMNALV 1478
++WQKAL LYEDIK INLKPTVSMMNAL+
Sbjct: 778 QNWQKALELYEDIKGINLKPTVSMMNALI 806
Score = 488 bits (1257), Expect(2) = 0.0
Identities = 246/331 (74%), Positives = 281/331 (84%)
Frame = -2
Query: 1479 CEADQLQKATEVLFEMKRQGLSPNTITYSILLVASEKKDDLEVGLKLLSQAKKDGVAPNL 1300
C ADQ QKA E+ EMK+ L PNTITYS LLVASEKKDDL+VGL LLS AKKDGVAPNL
Sbjct: 810 CYADQYQKALEIFSEMKKVDLCPNTITYSTLLVASEKKDDLDVGLMLLSHAKKDGVAPNL 869
Query: 1299 VMCRCLIGMCLRRFQQACALGEPVFSLKAGYLQLDSKWTSLALMVYREAVVAGVAPTVEE 1120
VMCRCL+ MC RRFQ+AC LGEPV S +G LQLDSKWTSLALMVYRE + AGV PT+EE
Sbjct: 870 VMCRCLLAMCSRRFQKACTLGEPVLSNNSGRLQLDSKWTSLALMVYRETIGAGVVPTIEE 929
Query: 1119 LSQVLGCLQLPRDGSLRRRLIENLGVSTDTSKGSKLCSLVDGFGEYDPRAFSLLEEAASL 940
LS VLGCLQLP D SL+ RLIENLG++ +TSKGS LCSL+DGFGEYDPRA SLLEEAASL
Sbjct: 930 LSLVLGCLQLPCDASLKERLIENLGLTVETSKGSNLCSLIDGFGEYDPRACSLLEEAASL 989
Query: 939 GIVPAVSLKRSPIIVDVRNLPTHAAEVYILTVLKGLKHRLAAGVRLPNLSILLPLEKTQI 760
GIVP S K SPI+VDVRNL HAA+VY+LTVLK LKHRLAAG ++PN+SILLP+E++ I
Sbjct: 990 GIVPLTSFKGSPIVVDVRNLHIHAAQVYLLTVLKSLKHRLAAGAKIPNISILLPVEQSHI 1049
Query: 759 QTPSGEKTIKVAGRISQAVAAVLRRLGLHFLGNESHGKVRINGVALKKWFQPKLDSPFSG 580
QTP+GEKTIK+AGRI++AVAA+LRRLGL + GNES GK+RINGV +K+WFQPKL+SPFS
Sbjct: 1050 QTPTGEKTIKIAGRINRAVAALLRRLGLPYQGNESFGKIRINGVIVKRWFQPKLESPFSW 1109
Query: 579 KPTDLSSFQRRLGKGIIYQQRNIRTGNLSLD 487
+ TD S Q RL KGI +QQR IRTG+LSLD
Sbjct: 1110 EQTDFSFSQTRLRKGISHQQRTIRTGDLSLD 1140
Score = 67.8 bits (164), Expect = 8e-08
Identities = 49/220 (22%), Positives = 98/220 (44%), Gaps = 5/220 (2%)
Frame = -1
Query: 2512 RDGRLNDCIEMLEDMESKGL-LDMDKVYHAGFFKACKSQKAVKEAFRFTKLIPN----PT 2348
+ G ++ ++L +M+++ ++ D++ KAC + V A ++I T
Sbjct: 634 QSGAVDRAFDVLSEMKAEARPIEPDQITIGALMKACANAGQVDRALEVYRMIDKCDIKGT 693
Query: 2347 LSTFNMLMSVCASSQDSEGAFEVLPLVQEARLTADCKLYTTLISTCARAGKVDAMFKVFH 2168
+ + ++ C+ + + E A + + + + D + LI GK++A F+V
Sbjct: 694 PEVYTIAVNCCSQNGNWEFARSIYDDMSKKGVNPDEMFISALIDVAGHTGKLEAAFEVLE 753
Query: 2167 EMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMQSKNVKPDRVVFNALITACGESG 1988
E G+ +Y +L+ C A KA Y ++ N+KP + NALITA +
Sbjct: 754 EARTKGINLGSISYSSLMGACCNAQNWQKALELYEDIKGINLKPTVSMMNALITALCYAD 813
Query: 1987 AVDRAFDVLAEMMSEIHPIDPDHITVGALMKACIRAGQID 1868
+A ++ +EM + P+ IT L+ A + +D
Sbjct: 814 QYQKALEIFSEMKKV--DLCPNTITYSTLLVASEKKDDLD 851
>ref|XP_011088516.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic [Sesamum indicum]
gi|747082397|ref|XP_011088517.1| PREDICTED:
pentatricopeptide repeat-containing protein MRL1,
chloroplastic [Sesamum indicum]
gi|747082399|ref|XP_011088518.1| PREDICTED:
pentatricopeptide repeat-containing protein MRL1,
chloroplastic [Sesamum indicum]
Length = 1190
Score = 626 bits (1614), Expect(2) = 0.0
Identities = 342/564 (60%), Positives = 412/564 (73%), Gaps = 14/564 (2%)
Frame = -1
Query: 3127 AIGSTLNRKSSE------MQLER-CGHES-GSVSKETMLLVEKEPFTASFFPVN-VQSRV 2975
A+ S++N E ++L++ C HE+ SV E + V + A+ N +Q
Sbjct: 296 AVPSSVNHIQEETAQLGSLKLDKICEHENPNSVDSEWSVPVMQTNLGAAPSSANHIQEET 355
Query: 2974 TEFGRLDCESLTEGEQVEPDLI----HREDLYTFYEAPMAKLNGLGAQSSGISLHKNGN- 2810
+ G L E L EG+ +LI RE+L+T A + KL+ L SS +L KNGN
Sbjct: 356 AQLGSLKLELLEEGDMNYSNLIFRDSEREELHTINLASLEKLDNLEPLSSYANLQKNGNC 415
Query: 2809 SSLFKASVVDGEQFLRQQLSHHAEKTEGHEKRHVGYYNNGSSHRKKDMGKRKESPAYKDS 2630
SSL S+ +G + + K E E+R Y G +++D RKE K
Sbjct: 416 SSLLNDSLAEGSNLTARNVILSIGKFE--EERPPEYQRKGFLCQQQDSRNRKELRK-KGK 472
Query: 2629 AKLHEHRSKILFPTHNLEGKHTHDRNRLPQPFSGYSKLLRDGRLNDCIEMLEDMESKGLL 2450
R K L + + K+ +D++ Y++LLR+GRLNDCIE+LED+E KGLL
Sbjct: 473 NIFGPDRHKNLSSSSYPKEKNDNDKHNPLWQLRVYNQLLREGRLNDCIELLEDLEEKGLL 532
Query: 2449 DMDKVYHAGFFKACKSQKAVKEAFRFTKLIPNPTLSTFNMLMSVCASSQDSEGAFEVLPL 2270
DMDKVYH FF CK+QKAVKEAFRFTKLIPNPTLSTFNMLMSVCASSQDSEGAF+VL
Sbjct: 533 DMDKVYHVRFFDVCKNQKAVKEAFRFTKLIPNPTLSTFNMLMSVCASSQDSEGAFQVLQH 592
Query: 2269 VQEARLTADCKLYTTLISTCARAGKVDAMFKVFHEMVNAGVEPNVHTYGALIDGCAKAGQ 2090
VQEA ADCKLYTTLISTCA++GKVD MFKVFH+MVNAGV+PNVHTYGALIDGCAKAGQ
Sbjct: 593 VQEAGFRADCKLYTTLISTCAKSGKVDTMFKVFHDMVNAGVQPNVHTYGALIDGCAKAGQ 652
Query: 2089 VAKAFGAYGIMQSKNVKPDRVVFNALITACGESGAVDRAFDVLAEMMSEIHPIDPDHITV 1910
VAKAFGAYGI++SK+VKPDRVVFNALITACG+SGAVDRAFDVLAEM +E+ PIDPDH+T+
Sbjct: 653 VAKAFGAYGILRSKDVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAELQPIDPDHVTI 712
Query: 1909 GALMKACIRAGQIDRAREVYKMLDKYNIKGTPEVYTIAVNSCSQKGDWEFACAVYSDMTR 1730
GALMKAC A Q+DRAREVY M+ +Y+I+GT E+YTIAVNSCS GDWEFAC+VY DM +
Sbjct: 713 GALMKACASADQVDRAREVYNMIHEYDIRGTAELYTIAVNSCSHHGDWEFACSVYDDMIK 772
Query: 1729 RGVAPDEMFISALIDVAGHAGNLDAAFEILKVARAKGIPSGSISYSSLMGACSNAKDWQK 1550
+GVAPDEMFISALIDVAGHAG +DAAFEIL+ ARAKG+ G+ISYSSLMGACS A+DWQK
Sbjct: 773 KGVAPDEMFISALIDVAGHAGKVDAAFEILQEARAKGMHVGTISYSSLMGACSKARDWQK 832
Query: 1549 ALLLYEDIKDINLKPTVSMMNALV 1478
A+ LYE IK +NLKPTVSMMNAL+
Sbjct: 833 AVELYESIKSLNLKPTVSMMNALI 856
Score = 482 bits (1241), Expect(2) = 0.0
Identities = 244/331 (73%), Positives = 275/331 (83%)
Frame = -2
Query: 1479 CEADQLQKATEVLFEMKRQGLSPNTITYSILLVASEKKDDLEVGLKLLSQAKKDGVAPNL 1300
C++DQLQKA E L EMK GL PNTITYSILLVASEKKDDLE GL L+SQAKKDGV PNL
Sbjct: 860 CDSDQLQKAMEALSEMKGIGLCPNTITYSILLVASEKKDDLEAGLMLISQAKKDGVNPNL 919
Query: 1299 VMCRCLIGMCLRRFQQACALGEPVFSLKAGYLQLDSKWTSLALMVYREAVVAGVAPTVEE 1120
VMCRCL+ MCLRRFQ AC LGEPV S G +QL+SKWTSLALMVYRE +VAG APT +E
Sbjct: 920 VMCRCLLAMCLRRFQAACTLGEPVLSFTFGQVQLNSKWTSLALMVYRETIVAGTAPTKDE 979
Query: 1119 LSQVLGCLQLPRDGSLRRRLIENLGVSTDTSKGSKLCSLVDGFGEYDPRAFSLLEEAASL 940
LSQVLGCL+LP D S+R RLIENLG++TDTSKG+ L SL+DGFGEYDPRAFSLLEEAASL
Sbjct: 980 LSQVLGCLKLPHDVSVRNRLIENLGLNTDTSKGANLLSLIDGFGEYDPRAFSLLEEAASL 1039
Query: 939 GIVPAVSLKRSPIIVDVRNLPTHAAEVYILTVLKGLKHRLAAGVRLPNLSILLPLEKTQI 760
G++P VSLK SPI+VDVRN H AEVY LTVLKGLKHRLAAG +LPN+ ILLP+EK QI
Sbjct: 1040 GVIPFVSLKESPIVVDVRNFQVHTAEVYFLTVLKGLKHRLAAGAKLPNVHILLPIEKAQI 1099
Query: 759 QTPSGEKTIKVAGRISQAVAAVLRRLGLHFLGNESHGKVRINGVALKKWFQPKLDSPFSG 580
QT +GEK I +A RISQAVAA+LRRLGL + GNES+GK+RINGV ++KWFQPKL SP+
Sbjct: 1100 QTSAGEKMINIASRISQAVAALLRRLGLSYQGNESYGKIRINGVIIRKWFQPKLGSPYRE 1159
Query: 579 KPTDLSSFQRRLGKGIIYQQRNIRTGNLSLD 487
K DLSS R LG GI QQR IRT + SL+
Sbjct: 1160 KKIDLSSSIRHLGSGISRQQRKIRTVHFSLE 1190
Score = 137 bits (344), Expect = 1e-28
Identities = 189/800 (23%), Positives = 317/800 (39%), Gaps = 56/800 (7%)
Frame = -1
Query: 3709 LLRKEIFGTGHNLRPSGLRFRRQCRKPGFRFQFHSRNFLLRXXXXXXXXXXXXXXXXXXX 3530
LLR E G GHNLR RR+C+K + Q + FL +
Sbjct: 31 LLRSEFLGCGHNLRLP----RRRCKKLRLQSQPYYYKFLFKATLESQQMLVVVAAFAAVS 86
Query: 3529 XXXVLVFHSYSRRRNNAQDKQMSGKLTHPLLQHIKSRMNY-LSAQVFILLNKNIPIDETV 3353
+V+ +YSR++ N KQMSG+LT + QHI+S M++ L+ + L K +D +
Sbjct: 87 AIT-VVYFTYSRKQFNV--KQMSGRLTLAVSQHIRSMMSWILTDSNRVDLRKIEAVDGSN 143
Query: 3352 DLPTEMSNNTFHHDDIVAETRIDEISVMNGATLATNTSELSICEMTASVVDDSLHTRESE 3173
D E + D+ AE + E V+ L S+ S +M AS V D+L ++ SE
Sbjct: 144 DFMKETRESNQADKDMEAEIKFRETDVIPRGILIAEASQ-SQSDMVASCVHDNLASQTSE 202
Query: 3172 GRSVXXXXXXXXXXEAIGSTLNRKSSEMQLERCGHES-GSVSKETMLLVEKEPFTASFFP 2996
+ +I S N S ++ HE+ SV E ++ + F A+
Sbjct: 203 ILEI-------SSMASISSKYNVPSFIKEVSE--HENPNSVDSEWLVPEIQINFGAAPPS 253
Query: 2995 VN-VQSRVTEFGRLDCESLTEGEQVEPDLIHREDLYTFYEAPMAKLNGLGAQSSGISLHK 2819
N +Q + + G L + + E E P+ E + P+ + N LGA S ++ +
Sbjct: 254 ENHIQEEMAQLGSLKLDEIREHE--NPNSADSE-----WSVPVMQAN-LGAVPSSVNHIQ 305
Query: 2818 NGNSSLFKASVVDGEQFLRQQLSHHAEKTEGHEKRHVGYYNNGSSHRKKDMGKRKESPAY 2639
+ L + ++ H + V +E A
Sbjct: 306 EETAQLGSLKL--------DKICEHENPNSVDSEWSVPVMQTNLGAAPSSANHIQEETAQ 357
Query: 2638 KDSAKLH------EHRSKILFPTHNLEGKHTHDRNRLP-----QPFSGYSKLLRDGRLND 2492
S KL + S ++F E HT + L +P S Y+ L ++G +
Sbjct: 358 LGSLKLELLEEGDMNYSNLIFRDSEREELHTINLASLEKLDNLEPLSSYANLQKNG---N 414
Query: 2491 CIEMLEDMESKG--------LLDMDK--------VYHAGFFKACKSQKAVKEAFRFTKLI 2360
C +L D ++G +L + K GF + + KE + K I
Sbjct: 415 CSSLLNDSLAEGSNLTARNVILSIGKFEEERPPEYQRKGFLCQQQDSRNRKELRKKGKNI 474
Query: 2359 PNPTLSTFNMLMSVCASSQDSEGAFEVL-------PLVQEARLTADCKLYTTLISTCARA 2201
P N+ S ++ L L++E RL DC L+
Sbjct: 475 FGPDRHK-NLSSSSYPKEKNDNDKHNPLWQLRVYNQLLREGRLN-DC---IELLEDLEEK 529
Query: 2200 GKVDAMFKVFH-----------------EMVNAGVEPNVHTYGALIDGCAKAGQVAKAFG 2072
G +D M KV+H P + T+ L+ CA + AF
Sbjct: 530 GLLD-MDKVYHVRFFDVCKNQKAVKEAFRFTKLIPNPTLSTFNMLMSVCASSQDSEGAFQ 588
Query: 2071 AYGIMQSKNVKPDRVVFNALITACGESGAVDRAFDVLAEMMSEIHPIDPDHITVGALMKA 1892
+Q + D ++ LI+ C +SG VD F V +M++ + P+ T GAL+
Sbjct: 589 VLQHVQEAGFRADCKLYTTLISTCAKSGKVDTMFKVFHDMVNA--GVQPNVHTYGALIDG 646
Query: 1891 CIRAGQIDRAREVYKMLDKYNIKGTPEVYTIAVNSCSQKGDWEFACAVYSDMTR--RGVA 1718
C +AGQ+ +A Y +L ++K V+ + +C Q G + A V ++M + +
Sbjct: 647 CAKAGQVAKAFGAYGILRSKDVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAELQPID 706
Query: 1717 PDEMFISALIDVAGHAGNLDAAFEILKVARAKGIPSGSISYSSLMGACSNAKDWQKALLL 1538
PD + I AL+ A +D A E+ + I + Y+ + +CS+ DW+ A +
Sbjct: 707 PDHVTIGALMKACASADQVDRAREVYNMIHEYDIRGTAELYTIAVNSCSHHGDWEFACSV 766
Query: 1537 YEDIKDINLKPTVSMMNALV 1478
Y+D+ + P ++AL+
Sbjct: 767 YDDMIKKGVAPDEMFISALI 786
Score = 99.8 bits (247), Expect = 2e-17
Identities = 80/339 (23%), Positives = 145/339 (42%), Gaps = 6/339 (1%)
Frame = -1
Query: 2524 SKLLRDGRLNDCIEMLEDMESKGLLDMDKVYHAGFFKACKSQKAVKEAFRFTKLIPN--- 2354
S + G+++ ++ DM + G+ Y A C V +AF ++ +
Sbjct: 610 STCAKSGKVDTMFKVFHDMVNAGVQPNVHTYGA-LIDGCAKAGQVAKAFGAYGILRSKDV 668
Query: 2353 -PTLSTFNMLMSVCASSQDSEGAFEVLPLVQEARLTADCKLYT--TLISTCARAGKVDAM 2183
P FN L++ C S + AF+VL ++ D T L+ CA A +VD
Sbjct: 669 KPDRVVFNALITACGQSGAVDRAFDVLAEMRAELQPIDPDHVTIGALMKACASADQVDRA 728
Query: 2182 FKVFHEMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMQSKNVKPDRVVFNALITA 2003
+V++ + + Y ++ C+ G A Y M K V PD + +ALI
Sbjct: 729 REVYNMIHEYDIRGTAELYTIAVNSCSHHGDWEFACSVYDDMIKKGVAPDEMFISALIDV 788
Query: 2002 CGESGAVDRAFDVLAEMMSEIHPIDPDHITVGALMKACIRAGQIDRAREVYKMLDKYNIK 1823
G +G VD AF++L E ++ + I+ +LM AC +A +A E+Y+ + N+K
Sbjct: 789 AGHAGKVDAAFEILQEARAKGMHVGT--ISYSSLMGACSKARDWQKAVELYESIKSLNLK 846
Query: 1822 GTPEVYTIAVNSCSQKGDWEFACAVYSDMTRRGVAPDEMFISALIDVAGHAGNLDAAFEI 1643
T + + + + A S+M G+ P+ + S L+ + +L+A +
Sbjct: 847 PTVSMMNALITALCDSDQLQKAMEALSEMKGIGLCPNTITYSILLVASEKKDDLEAGLML 906
Query: 1642 LKVARAKGIPSGSISYSSLMGACSNAKDWQKALLLYEDI 1526
+ A+ G+ + L+ C + +Q A L E +
Sbjct: 907 ISQAKKDGVNPNLVMCRCLLAMC--LRRFQAACTLGEPV 943
>ref|XP_009799358.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic isoform X2 [Nicotiana sylvestris]
Length = 1064
Score = 610 bits (1572), Expect(2) = 0.0
Identities = 372/779 (47%), Positives = 466/779 (59%), Gaps = 32/779 (4%)
Frame = -1
Query: 3718 CSPLLRKEI-------FGTGHN-LR-PSGLRFRRQCRKPGFRFQFHSRNFLLRXXXXXXX 3566
CSP+ I FG+ HN LR P LR RR+CR GF+F HS F+LR
Sbjct: 17 CSPISSSLIPRRHQCFFGSSHNNLRSPVLLRSRRKCRNIGFQFGAHSSPFVLRASLDSQS 76
Query: 3565 XXXXXXXXXXXXXXXVLVFHSYSRRRNNAQDKQMSGKLTHPLLQHIKSRMNYLSAQVFIL 3386
++F +S+R N ++++ S +++ M
Sbjct: 77 VVVVAAVVTISALT--IIFFEFSKRNANLKEEEKS----------VETSM---------- 114
Query: 3385 LNKNIPIDETVDLPTEMSNNTFHHDDIVAETRIDEISVMNGATLATNTSELSICEMTASV 3206
TE+S + +D + ++ +M T+ TN E + AS
Sbjct: 115 --------------TEVSKVSNELEDAGTDVQLGGAYLMQ--TVITNKIESADANQMASS 158
Query: 3205 VDDSLHTRESEGRSVXXXXXXXXXXEAIGSTLNRKSSEMQLERCGHESGSVSKETMLLVE 3026
SL T + G + + +LN E H G+ + + E
Sbjct: 159 SGGSL-TLGAPGSNTHAESDVVPSSSFVAESLNNYLQE-------HLQGTKTSNRLTTEE 210
Query: 3025 -KEPFTASFFP-VNVQSRVTEFGRLDCESLTEG------EQVEPDLIH----------RE 2900
+ FP +N+ + E + D + +G + V D + R+
Sbjct: 211 VSSEHSVGLFPAINIDKGIEETKKTDHALMADGGLKIAHKHVAEDEVSIHNLIFRDSARK 270
Query: 2899 DLYTFYEAPMAKLNGLGAQSSGISLHKNGN-----SSLFKASVVDGEQFLRQQLSHHAEK 2735
+LY+F+EA LNG A +S H +G S K S + E F
Sbjct: 271 ELYSFFEASTKSLNGQKALTS----HASGERISVFSHTSKVSSIQAEDF----------- 315
Query: 2734 TEGHEKRHVGYYNNGSSHRKKDMGKRKESPAYKDSAKLHEHRSKILFPTHNLEGKHTHDR 2555
EK G Y G + K D GKRK K+ + L ++ + F N +G D
Sbjct: 316 ---KEKSPHGCYKEGPFNNK-DFGKRKNHFTKKEKSILLDNGTTKQFQIPNPKGIQVCDG 371
Query: 2554 NRLPQPFSGYSKLLRDGRLNDCIEMLEDMESKGLLDMDKVYHAGFFKACKSQKAVKEAFR 2375
+ F Y + LR+GRL DCIEML++ME G L+MDKVYHAGFF+ACKSQKAVKEAFR
Sbjct: 372 PQPSDQFRAYRRFLREGRLMDCIEMLDNMERHGSLNMDKVYHAGFFQACKSQKAVKEAFR 431
Query: 2374 FTKLIPNPTLSTFNMLMSVCASSQDSEGAFEVLPLVQEARLTADCKLYTTLISTCARAGK 2195
FTKLI NPTLSTFNML+SVCA+S+D EGAF V+ LV+E L DCKLYTTLISTCA++GK
Sbjct: 432 FTKLIQNPTLSTFNMLLSVCATSRDLEGAFRVVQLVRETGLKPDCKLYTTLISTCAKSGK 491
Query: 2194 VDAMFKVFHEMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMQSKNVKPDRVVFNA 2015
VD MF+VFHEMVNAGVEPNV+TYGALIDGCAKAGQVAKAFGAYGIM+SKNVKPDRVVFNA
Sbjct: 492 VDTMFEVFHEMVNAGVEPNVNTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNA 551
Query: 2014 LITACGESGAVDRAFDVLAEMMSEIHPIDPDHITVGALMKACIRAGQIDRAREVYKMLDK 1835
LITACG+SGAVDRAFDVL+EM +E PI+PD ITVGALMKAC AGQ+DRA +VY+M+DK
Sbjct: 552 LITACGQSGAVDRAFDVLSEMKAEARPIEPDQITVGALMKACANAGQVDRALDVYRMIDK 611
Query: 1834 YNIKGTPEVYTIAVNSCSQKGDWEFACAVYSDMTRRGVAPDEMFISALIDVAGHAGNLDA 1655
Y+IKGT EVYTIAVN CSQ G+W+FA ++Y DMTR+GV PDEMFISAL+DVAGHAG LDA
Sbjct: 612 YDIKGTAEVYTIAVNCCSQNGNWDFARSIYDDMTRKGVYPDEMFISALVDVAGHAGKLDA 671
Query: 1654 AFEILKVARAKGIPSGSISYSSLMGACSNAKDWQKALLLYEDIKDINLKPTVSMMNALV 1478
AF++L+ AR KGI GS+SYSSLMGACSNAK+WQKAL LYED+K + LKPTVSMMNALV
Sbjct: 672 AFDVLEEARTKGINVGSMSYSSLMGACSNAKNWQKALELYEDVKGVKLKPTVSMMNALV 730
Score = 494 bits (1271), Expect(2) = 0.0
Identities = 243/331 (73%), Positives = 283/331 (85%)
Frame = -2
Query: 1479 CEADQLQKATEVLFEMKRQGLSPNTITYSILLVASEKKDDLEVGLKLLSQAKKDGVAPNL 1300
C+ADQ QKA E+ EMKR L PNTITYS LLVASEKKDDL++GL LLS AKKDGV+PNL
Sbjct: 734 CDADQYQKALEIFSEMKRVDLCPNTITYSTLLVASEKKDDLDIGLMLLSHAKKDGVSPNL 793
Query: 1299 VMCRCLIGMCLRRFQQACALGEPVFSLKAGYLQLDSKWTSLALMVYREAVVAGVAPTVEE 1120
VMCRCL+ MCLRRFQ+AC LGEPV S +G LQLDSKWTSLALM+YRE + AGV PT++E
Sbjct: 794 VMCRCLLAMCLRRFQKACTLGEPVLSYNSGRLQLDSKWTSLALMIYRETIAAGVVPTMDE 853
Query: 1119 LSQVLGCLQLPRDGSLRRRLIENLGVSTDTSKGSKLCSLVDGFGEYDPRAFSLLEEAASL 940
LS VLGCLQLPRD SL+ RLIENLG++ +TSKGS LCSL+DGFGEYD RAFSLLEEAASL
Sbjct: 854 LSLVLGCLQLPRDASLKERLIENLGLTVETSKGSNLCSLIDGFGEYDSRAFSLLEEAASL 913
Query: 939 GIVPAVSLKRSPIIVDVRNLPTHAAEVYILTVLKGLKHRLAAGVRLPNLSILLPLEKTQI 760
G +P SLK +P+ VD RNL H A+VY+LTVLKGLKHRLAAG ++PN+SILLP+E++ I
Sbjct: 914 GTIPLTSLKGNPVAVDARNLHIHTAQVYLLTVLKGLKHRLAAGAKIPNISILLPVEQSHI 973
Query: 759 QTPSGEKTIKVAGRISQAVAAVLRRLGLHFLGNESHGKVRINGVALKKWFQPKLDSPFSG 580
QTP+GEKTIK+AGRI++AVAA+LRRLGL + GNES+GK+RINGV +KKWFQPKL+SPFS
Sbjct: 974 QTPTGEKTIKIAGRINRAVAALLRRLGLPYQGNESYGKIRINGVIVKKWFQPKLESPFSW 1033
Query: 579 KPTDLSSFQRRLGKGIIYQQRNIRTGNLSLD 487
+ TDLS RL KGI +QQRNIR GNLSLD
Sbjct: 1034 EQTDLSFSPTRLRKGISHQQRNIRAGNLSLD 1064
Score = 67.0 bits (162), Expect = 1e-07
Identities = 47/220 (21%), Positives = 98/220 (44%), Gaps = 5/220 (2%)
Frame = -1
Query: 2512 RDGRLNDCIEMLEDMESKGL-LDMDKVYHAGFFKACKSQKAVKEAFRFTKLIPN----PT 2348
+ G ++ ++L +M+++ ++ D++ KAC + V A ++I T
Sbjct: 558 QSGAVDRAFDVLSEMKAEARPIEPDQITVGALMKACANAGQVDRALDVYRMIDKYDIKGT 617
Query: 2347 LSTFNMLMSVCASSQDSEGAFEVLPLVQEARLTADCKLYTTLISTCARAGKVDAMFKVFH 2168
+ + ++ C+ + + + A + + + D + L+ AGK+DA F V
Sbjct: 618 AEVYTIAVNCCSQNGNWDFARSIYDDMTRKGVYPDEMFISALVDVAGHAGKLDAAFDVLE 677
Query: 2167 EMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMQSKNVKPDRVVFNALITACGESG 1988
E G+ +Y +L+ C+ A KA Y ++ +KP + NAL+TA ++
Sbjct: 678 EARTKGINVGSMSYSSLMGACSNAKNWQKALELYEDVKGVKLKPTVSMMNALVTALCDAD 737
Query: 1987 AVDRAFDVLAEMMSEIHPIDPDHITVGALMKACIRAGQID 1868
+A ++ +EM + P+ IT L+ A + +D
Sbjct: 738 QYQKALEIFSEMKRV--DLCPNTITYSTLLVASEKKDDLD 775
>ref|XP_009589921.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic isoform X2 [Nicotiana tomentosiformis]
Length = 1063
Score = 607 bits (1565), Expect(2) = 0.0
Identities = 367/756 (48%), Positives = 458/756 (60%), Gaps = 22/756 (2%)
Frame = -1
Query: 3679 HNLRPSGL-RFRRQCRKPGFRFQFHSRNFLLRXXXXXXXXXXXXXXXXXXXXXXVLVFHS 3503
+NLR GL R RR+CR GF+F HS F+LR ++F
Sbjct: 38 NNLRSPGLLRLRRKCRNIGFQFSAHSSRFVLRASLDSQSVVVVAAVVTISALT--IIFFE 95
Query: 3502 YSRRRNNAQDKQMSGKLTHPLLQHIKSRMNYLSAQVFILLNKNIPIDETVDLPTEMSNNT 3323
+S+R N ++++ S I++ M E+S +
Sbjct: 96 FSKRNANIKEEEKS----------IETPMK------------------------EVSKVS 121
Query: 3322 FHHDDIVAETRIDEISVMNGATLATNTSELSICEMTASVVDDSLHTRESEGRSVXXXXXX 3143
H++ + ++ +M T+ TN E + AS SL T + G +
Sbjct: 122 NEHENGGTDVQLGGTYLMQ--TVITNKIESADANQMASSSGGSL-TLGAPGSNTHAESD- 177
Query: 3142 XXXXEAIGSTLNRKSSEMQLERCGHESGSVSKETMLLVEKEPFTASFFPVNVQSRVTEFG 2963
I S+ + L+ + + ++ T V E F +N+ + E
Sbjct: 178 -----VIPSSFVAELHNNYLQEHLQGTKTSNRLTTEEVSSEHSVGLFPAINIDKGIEETK 232
Query: 2962 RLDCESLTEG------EQVEPDLIH----------REDLYTFYEAPMAKLNGLGAQSSGI 2831
+ D + +G + V D + R++LY+F+EA LNG A +S
Sbjct: 233 KTDHALMVDGGLKIAHKHVAEDEVSIHNLIFRDSARKELYSFFEASTKNLNGQKALTS-- 290
Query: 2830 SLHKNGN-----SSLFKASVVDGEQFLRQQLSHHAEKTEGHEKRHVGYYNNGSSHRKKDM 2666
H +G S K S + E F EKR G Y G + K D+
Sbjct: 291 --HASGERISVFSHTSKVSSIQAEDF--------------KEKRPHGCYKEGPFNNK-DI 333
Query: 2665 GKRKESPAYKDSAKLHEHRSKILFPTHNLEGKHTHDRNRLPQPFSGYSKLLRDGRLNDCI 2486
GKRK K+ + L ++ + FP N +G D + F Y LR+GRL DCI
Sbjct: 334 GKRKHHFTKKEKSILLDNGNTKQFPIPNPKGIQVCDGPQPSDQFRAYRHFLREGRLMDCI 393
Query: 2485 EMLEDMESKGLLDMDKVYHAGFFKACKSQKAVKEAFRFTKLIPNPTLSTFNMLMSVCASS 2306
E L++ME G L+MDKVYHAGFF+ACKSQKAVKEAFRFTKLI NPTLSTFNML+SVCASS
Sbjct: 394 ERLDNMERHGSLNMDKVYHAGFFQACKSQKAVKEAFRFTKLIQNPTLSTFNMLLSVCASS 453
Query: 2305 QDSEGAFEVLPLVQEARLTADCKLYTTLISTCARAGKVDAMFKVFHEMVNAGVEPNVHTY 2126
+D EGAF VL LV+E L DCKLYTTLISTCA+AGKVD MF+VFHEMVNAGVEPNV+TY
Sbjct: 454 RDLEGAFRVLQLVRETGLKPDCKLYTTLISTCAKAGKVDTMFEVFHEMVNAGVEPNVNTY 513
Query: 2125 GALIDGCAKAGQVAKAFGAYGIMQSKNVKPDRVVFNALITACGESGAVDRAFDVLAEMMS 1946
GALIDGCAKAGQVAKAFGAYGIM+SKNVKPDRVVFNALITACG+SGAVDRAFDVL+EM +
Sbjct: 514 GALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLSEMKA 573
Query: 1945 EIHPIDPDHITVGALMKACIRAGQIDRAREVYKMLDKYNIKGTPEVYTIAVNSCSQKGDW 1766
E PI+PD IT+GALMKAC AGQ+DRA +VY+M+DKY+IKGT EVYTIAVN CSQ +W
Sbjct: 574 EARPIEPDQITIGALMKACANAGQVDRALDVYRMIDKYDIKGTAEVYTIAVNCCSQNDNW 633
Query: 1765 EFACAVYSDMTRRGVAPDEMFISALIDVAGHAGNLDAAFEILKVARAKGIPSGSISYSSL 1586
+FA ++Y DMTR+GV PDEMFISAL+DVAGHAG LDAAF++L+ AR KGI GS+SYSSL
Sbjct: 634 DFARSIYDDMTRKGVYPDEMFISALVDVAGHAGKLDAAFDVLEEARTKGINVGSMSYSSL 693
Query: 1585 MGACSNAKDWQKALLLYEDIKDINLKPTVSMMNALV 1478
MGACSNAK+WQKAL LYEDIK + LKPTVSMMNALV
Sbjct: 694 MGACSNAKNWQKALELYEDIKGVKLKPTVSMMNALV 729
Score = 496 bits (1276), Expect(2) = 0.0
Identities = 243/331 (73%), Positives = 285/331 (86%)
Frame = -2
Query: 1479 CEADQLQKATEVLFEMKRQGLSPNTITYSILLVASEKKDDLEVGLKLLSQAKKDGVAPNL 1300
C+ADQ QKA E+ EMKR L PNTITYS LLVASEKKDDL++GL LLS AKKDGV+PNL
Sbjct: 733 CDADQYQKALEIFSEMKRVDLCPNTITYSTLLVASEKKDDLDIGLMLLSHAKKDGVSPNL 792
Query: 1299 VMCRCLIGMCLRRFQQACALGEPVFSLKAGYLQLDSKWTSLALMVYREAVVAGVAPTVEE 1120
VMCRCL+ MCLRRFQ+AC LGEPV S +G LQLDSKWTSLALM+YRE + AGV PT++E
Sbjct: 793 VMCRCLLAMCLRRFQKACTLGEPVLSYNSGRLQLDSKWTSLALMIYRETIAAGVVPTMDE 852
Query: 1119 LSQVLGCLQLPRDGSLRRRLIENLGVSTDTSKGSKLCSLVDGFGEYDPRAFSLLEEAASL 940
LS VLGCLQLPRD SL+ RLIENLG++ +TSKGS LCSL+DGFGEYDPRAFSLLEEAASL
Sbjct: 853 LSLVLGCLQLPRDASLKERLIENLGLTVETSKGSNLCSLIDGFGEYDPRAFSLLEEAASL 912
Query: 939 GIVPAVSLKRSPIIVDVRNLPTHAAEVYILTVLKGLKHRLAAGVRLPNLSILLPLEKTQI 760
G +P SLK +P+ VD RNL H A+VY+LTVLKGLKHRLAAG ++PN+SILLP+E++ I
Sbjct: 913 GTIPLTSLKGNPVAVDARNLHIHTAQVYLLTVLKGLKHRLAAGAKIPNISILLPVEQSHI 972
Query: 759 QTPSGEKTIKVAGRISQAVAAVLRRLGLHFLGNESHGKVRINGVALKKWFQPKLDSPFSG 580
QTP+GEKTIK+AGRI++AVAA+LRRLGL + GNES+GK+RINGV +K+WFQPKL+SPFS
Sbjct: 973 QTPTGEKTIKIAGRINRAVAALLRRLGLPYQGNESYGKIRINGVIVKRWFQPKLESPFSW 1032
Query: 579 KPTDLSSFQRRLGKGIIYQQRNIRTGNLSLD 487
+ T+LS Q RL KGI +QQRNIRT NLSLD
Sbjct: 1033 EQTNLSFSQTRLRKGISHQQRNIRTSNLSLD 1063
Score = 67.8 bits (164), Expect = 8e-08
Identities = 47/220 (21%), Positives = 98/220 (44%), Gaps = 5/220 (2%)
Frame = -1
Query: 2512 RDGRLNDCIEMLEDMESKGL-LDMDKVYHAGFFKACKSQKAVKEAFRFTKLIPN----PT 2348
+ G ++ ++L +M+++ ++ D++ KAC + V A ++I T
Sbjct: 557 QSGAVDRAFDVLSEMKAEARPIEPDQITIGALMKACANAGQVDRALDVYRMIDKYDIKGT 616
Query: 2347 LSTFNMLMSVCASSQDSEGAFEVLPLVQEARLTADCKLYTTLISTCARAGKVDAMFKVFH 2168
+ + ++ C+ + + + A + + + D + L+ AGK+DA F V
Sbjct: 617 AEVYTIAVNCCSQNDNWDFARSIYDDMTRKGVYPDEMFISALVDVAGHAGKLDAAFDVLE 676
Query: 2167 EMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMQSKNVKPDRVVFNALITACGESG 1988
E G+ +Y +L+ C+ A KA Y ++ +KP + NAL+TA ++
Sbjct: 677 EARTKGINVGSMSYSSLMGACSNAKNWQKALELYEDIKGVKLKPTVSMMNALVTALCDAD 736
Query: 1987 AVDRAFDVLAEMMSEIHPIDPDHITVGALMKACIRAGQID 1868
+A ++ +EM + P+ IT L+ A + +D
Sbjct: 737 QYQKALEIFSEMKRV--DLCPNTITYSTLLVASEKKDDLD 774
>ref|XP_012837131.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic [Erythranthe guttatus]
Length = 1102
Score = 647 bits (1669), Expect(2) = 0.0
Identities = 382/755 (50%), Positives = 475/755 (62%), Gaps = 11/755 (1%)
Frame = -1
Query: 3709 LLRKEIFGTGHNLRPSGLRFRRQCRKPGFRFQFHSRNFLLRXXXXXXXXXXXXXXXXXXX 3530
+LR E G+GHNLR RR+C+K + Q + FL +
Sbjct: 28 ILRSEFLGSGHNLRLQ----RRRCKKSRHKHQSDNCKFLFKASLESQPIFVIAAAVATVS 83
Query: 3529 XXXVLVFHSYSRRRNNAQDKQMSGKLTHPLLQHIKSRMNYLSAQVFILLNKNIPIDETVD 3350
+V+ SYSR+ N QMSG+LT L + I+S +++ + +K D + +
Sbjct: 84 AMT-VVYFSYSRKLFNIA--QMSGELTLALSEQIRSMTSWILTSHIV--DKKKSTDGSKN 138
Query: 3349 LPTEMSNNTFHHDDIVAETRIDEISVMNGATLATNTSELSICEMTASVVDDSLHTRESEG 3170
L TE N + AE +I E +V G L + AS DSL + SE
Sbjct: 139 LTTETRENIQADKNSSAEIKIGETAVTPGGALIVEATRFQ-SNNVASSGHDSLTFQTSET 197
Query: 3169 RSVXXXXXXXXXXEAIGSTLNRKSSEMQLERCGHESGSVSKETMLLVEKEPFTASFFPVN 2990
+ A +R++ E+ H + SV E V + A+ N
Sbjct: 198 LEISSAPSLFSNIGA--QPFSREACEVHRNAHVH-TNSVDSELSTSVMQVNLGAALSSAN 254
Query: 2989 -VQSRVTEFGRLDCESLTEGEQVEPDLIHRE----DLYTFYEAPMAKLNGLGAQSSGISL 2825
VQ + RL E L E DLI R+ +LYT EA + KL+ + SS +L
Sbjct: 255 HVQEESDKLSRLKFEYLEEDVINNLDLIFRDSVRRELYTINEASLEKLDNVEPLSSCATL 314
Query: 2824 HKNGNS-SLFKASVVDGEQFLRQQLSHHAEKTEGHEKRHVGYYNNGSSHRKKDMGKRKES 2648
K N S S+ G + + + + +++ +GY + +++D RK+S
Sbjct: 315 SKKINHISHLNKSLAKGSNLTARNVILPTDTEKFEDEKLLGYRSGVFLSQQQDSRNRKDS 374
Query: 2647 PAYKDSAKL-----HEHRSKILFPTHNLEGKHTHDRNRLPQPFSGYSKLLRDGRLNDCIE 2483
K+ K H++ SK L P+ + E KH +++ Y +LLR+GRLNDCIE
Sbjct: 375 RNRKELKKKDTNISHQNESKNLSPSSDPEDKHNNNKQNRSWQLRVYDQLLREGRLNDCIE 434
Query: 2482 MLEDMESKGLLDMDKVYHAGFFKACKSQKAVKEAFRFTKLIPNPTLSTFNMLMSVCASSQ 2303
+LED+E LLDMDKVYHA FF CKSQKAVKEA RF +LI NPTLSTFNM MSVCASSQ
Sbjct: 435 LLEDLEQNSLLDMDKVYHARFFDVCKSQKAVKEASRFIRLISNPTLSTFNMFMSVCASSQ 494
Query: 2302 DSEGAFEVLPLVQEARLTADCKLYTTLISTCARAGKVDAMFKVFHEMVNAGVEPNVHTYG 2123
DSEGAF+VL VQE L ADCKLYTTLISTCA++GKVD MFKVFHEMVNAGVEPN+HTYG
Sbjct: 495 DSEGAFQVLKHVQEVGLKADCKLYTTLISTCAKSGKVDTMFKVFHEMVNAGVEPNLHTYG 554
Query: 2122 ALIDGCAKAGQVAKAFGAYGIMQSKNVKPDRVVFNALITACGESGAVDRAFDVLAEMMSE 1943
ALIDGCAKAGQVAKAFGAYGI++SKNVKPDRVVFNALITACG+SGAVDRAFDVLAEM +E
Sbjct: 555 ALIDGCAKAGQVAKAFGAYGILRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAE 614
Query: 1942 IHPIDPDHITVGALMKACIRAGQIDRAREVYKMLDKYNIKGTPEVYTIAVNSCSQKGDWE 1763
I PI+PDHIT+GALMKAC RA ++DRAREVY M+ ++ I+GT E+YTIAVNSCS GDWE
Sbjct: 615 IQPIEPDHITIGALMKACARADEVDRAREVYNMIHEFGIRGTAELYTIAVNSCSHHGDWE 674
Query: 1762 FACAVYSDMTRRGVAPDEMFISALIDVAGHAGNLDAAFEILKVARAKGIPSGSISYSSLM 1583
FAC+VY DM ++GVAPDEMFISALIDVAGHAG +DAAFEIL+ ARAKG+ G ISYSSLM
Sbjct: 675 FACSVYDDMIKKGVAPDEMFISALIDVAGHAGKVDAAFEILQEARAKGMRIGIISYSSLM 734
Query: 1582 GACSNAKDWQKALLLYEDIKDINLKPTVSMMNALV 1478
GACSNA DW+KAL LYE K + LKPTVSMMNAL+
Sbjct: 735 GACSNASDWKKALELYEVTKRMKLKPTVSMMNALI 769
Score = 453 bits (1166), Expect(2) = 0.0
Identities = 227/329 (68%), Positives = 268/329 (81%)
Frame = -2
Query: 1479 CEADQLQKATEVLFEMKRQGLSPNTITYSILLVASEKKDDLEVGLKLLSQAKKDGVAPNL 1300
C+ADQLQKA E L EMK GL PNTITYSILLVA EKKDDLE GL L+SQAKKD V PNL
Sbjct: 773 CDADQLQKAMESLSEMKSVGLCPNTITYSILLVACEKKDDLEAGLMLISQAKKDKVTPNL 832
Query: 1299 VMCRCLIGMCLRRFQQACALGEPVFSLKAGYLQLDSKWTSLALMVYREAVVAGVAPTVEE 1120
VMCRCLIGMCLRRFQ AC +GEPV S +G +QL+SKWTSLALMVYRE ++AGV PT++E
Sbjct: 833 VMCRCLIGMCLRRFQAACTVGEPVLSFSSGQVQLNSKWTSLALMVYRETIMAGVTPTMDE 892
Query: 1119 LSQVLGCLQLPRDGSLRRRLIENLGVSTDTSKGSKLCSLVDGFGEYDPRAFSLLEEAASL 940
LSQVLGCL+LP D S++ RLIENLGV+T SKG+ L SL+DGFGEYDPRAFSL+EEAASL
Sbjct: 893 LSQVLGCLKLPHDASIKNRLIENLGVNTIASKGASLYSLIDGFGEYDPRAFSLVEEAASL 952
Query: 939 GIVPAVSLKRSPIIVDVRNLPTHAAEVYILTVLKGLKHRLAAGVRLPNLSILLPLEKTQI 760
G +P VSLK SPI+VDVR+ H AEVY+LTVLKGLKHRLAAGV+LPN+ +LLP+E TQI
Sbjct: 953 GTIPVVSLKESPIVVDVRDFQFHTAEVYLLTVLKGLKHRLAAGVKLPNVLVLLPVEPTQI 1012
Query: 759 QTPSGEKTIKVAGRISQAVAAVLRRLGLHFLGNESHGKVRINGVALKKWFQPKLDSPFSG 580
QT +GEK I A R SQA+AA+LRRLGL + GNES GK+++NG+ ++ W QP+L +PF G
Sbjct: 1013 QTSAGEKMINFADRRSQALAALLRRLGLSYQGNESFGKMKLNGLTIRMWLQPELGTPFGG 1072
Query: 579 KPTDLSSFQRRLGKGIIYQQRNIRTGNLS 493
K D RRLG + Q++ IRTG+LS
Sbjct: 1073 KKIDRGPPLRRLGSDLSRQRQKIRTGHLS 1101
Score = 74.3 bits (181), Expect = 8e-10
Identities = 63/273 (23%), Positives = 109/273 (39%), Gaps = 41/273 (15%)
Frame = -1
Query: 2443 DKVYHAGFFKACKSQKAVKEAFRF-----TKLIP-NPTLSTFNMLMSVCASSQDSEGAFE 2282
D+V AC AV AF ++ P P T LM CA + + + A E
Sbjct: 584 DRVVFNALITACGQSGAVDRAFDVLAEMRAEIQPIEPDHITIGALMKACARADEVDRARE 643
Query: 2281 VLPLVQEARLTADCKLYTTLISTCAR---------------------------------- 2204
V ++ E + +LYT +++C+
Sbjct: 644 VYNMIHEFGIRGTAELYTIAVNSCSHHGDWEFACSVYDDMIKKGVAPDEMFISALIDVAG 703
Query: 2203 -AGKVDAMFKVFHEMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMQSKNVKPDRV 2027
AGKVDA F++ E G+ + +Y +L+ C+ A KA Y + + +KP
Sbjct: 704 HAGKVDAAFEILQEARAKGMRIGIISYSSLMGACSNASDWKKALELYEVTKRMKLKPTVS 763
Query: 2026 VFNALITACGESGAVDRAFDVLAEMMSEIHPIDPDHITVGALMKACIRAGQIDRAREVYK 1847
+ NALITA ++ + +A + L+EM S + P+ IT L+ AC + ++ +
Sbjct: 764 MMNALITALCDADQLQKAMESLSEMKSV--GLCPNTITYSILLVACEKKDDLEAGLMLIS 821
Query: 1846 MLDKYNIKGTPEVYTIAVNSCSQKGDWEFACAV 1748
K + + + C ++ ++ AC V
Sbjct: 822 QAKKDKVTPNLVMCRCLIGMCLRR--FQAACTV 852
>ref|XP_006359637.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic-like isoform X2 [Solanum tuberosum]
Length = 1109
Score = 612 bits (1578), Expect(2) = 0.0
Identities = 382/784 (48%), Positives = 472/784 (60%), Gaps = 37/784 (4%)
Frame = -1
Query: 3718 CSPLL------RKEIFGTGHNLRPSGLRFRRQCRKPGFRFQFHSRNFLLRXXXXXXXXXX 3557
CSP+ R+ + G+ H+LRP GL RR+CR GF+F ++ F+LR
Sbjct: 17 CSPISSSLVPRRQFLSGSTHSLRPPGLHSRRRCRNIGFQFGSNTSRFVLRASLDSQTVVF 76
Query: 3556 XXXXXXXXXXXXVLVFHSYSRRRNNAQDK----------QMSGKLTHPLLQHIKSRMNYL 3407
+VF +S+R NA K QM ++T +H + L
Sbjct: 77 ASVVTISALT---VVFLEFSKRNTNANAKFKEEEKSVKIQMK-EVTKVSNEHEDGGTDVL 132
Query: 3406 SAQ----VFILLNKNIPIDETVDL-PTEMSNNTFHHDDIVAETRIDEISVMNGATLATNT 3242
+ + NI +T L P+ + T A T D + A L
Sbjct: 133 QHDGTDLIQTFVTNNIESVDTNQLAPSSNGSLTLGASVPNAHTESDAVPSSFVAELNNIY 192
Query: 3241 SELSICEMTASVVDDSLHTRESEGRSVXXXXXXXXXXEAIGSTLNRKSSEMQLERCGHES 3062
+ ++ S + + RE E +A+ S+ +S + L+ HE+
Sbjct: 193 LQENLRMTKMSNILTTEEVREPE-------PIAHTESDAVPSSFVEESKNICLQEHLHET 245
Query: 3061 GSVSKETMLLVEKEPFTASFFPVNVQSRVTEFGRLDCESLT------------EGEQVEP 2918
+ T V E A F +N+ +R + ++D E +T E E
Sbjct: 246 KMSNILTTEEVSSERSVALFPAINIDNRPEKTKKMDQELMTKDGCKKAHKFVAEDEVTIH 305
Query: 2917 DLIHR----EDLYTFYEAPMAKLNGLGAQSSGISLHKNGNSSLFKASVVDGEQFLRQQLS 2750
+LI R EDLY+F+EA LNG A +S SL G + AS V S
Sbjct: 306 NLIFRDSTREDLYSFFEASSKSLNGQDALTSHASLQ--GIGAFSPASKV---------FS 354
Query: 2749 HHAEKTEGHEKRHVGYYNNGSSHRKKDMGKRKESPAYKDSAKLHEHRSKILFPTHNLEGK 2570
AE E EKR G Y G + KKD KR + K+ + L ++ + N +G
Sbjct: 355 VRAEDFE--EKRSHGCYKEGPFN-KKDFLKRMQHFTNKEKSILPDNGASKQLQIPNPKGI 411
Query: 2569 HTHDRNRLPQPFSGYSKLLRDGRLNDCIEMLEDMESKGLLDMDKVYHAGFFKACKSQKAV 2390
DR F Y LR+GRL DCIE+LEDM G L+MDKVYHAGFF+ CKSQKAV
Sbjct: 412 QVCDRPNPSDQFRDYRHFLREGRLMDCIEILEDMGRHGSLNMDKVYHAGFFQVCKSQKAV 471
Query: 2389 KEAFRFTKLIPNPTLSTFNMLMSVCASSQDSEGAFEVLPLVQEARLTADCKLYTTLISTC 2210
KEAFRFTKLI NPTLSTFNML++VCASS+D E AF+V LV+E L DCKLYTTLISTC
Sbjct: 472 KEAFRFTKLIRNPTLSTFNMLLTVCASSRDLERAFQVFQLVRETGLKPDCKLYTTLISTC 531
Query: 2209 ARAGKVDAMFKVFHEMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMQSKNVKPDR 2030
A+AGKVD MF+VFHEMVNAGVEPN +TYG LIDGCAKAGQVAKAFGAYGIM+SKNVKPDR
Sbjct: 532 AKAGKVDTMFEVFHEMVNAGVEPNANTYGTLIDGCAKAGQVAKAFGAYGIMRSKNVKPDR 591
Query: 2029 VVFNALITACGESGAVDRAFDVLAEMMSEIHPIDPDHITVGALMKACIRAGQIDRAREVY 1850
VVFNALITACG+SGAVDRAFDVL+EM +E PI+PD IT+GALMKAC AGQ+DRA EVY
Sbjct: 592 VVFNALITACGQSGAVDRAFDVLSEMKAEARPIEPDQITIGALMKACANAGQVDRALEVY 651
Query: 1849 KMLDKYNIKGTPEVYTIAVNSCSQKGDWEFACAVYSDMTRRGVAPDEMFISALIDVAGHA 1670
+M+DK +IKGTPEVYTIAVN CSQ G+WEFA ++Y DM+++GV PDEMFISALIDVAGH
Sbjct: 652 RMIDKCDIKGTPEVYTIAVNCCSQNGNWEFARSIYDDMSKKGVNPDEMFISALIDVAGHT 711
Query: 1669 GNLDAAFEILKVARAKGIPSGSISYSSLMGACSNAKDWQKALLLYEDIKDINLKPTVSMM 1490
G L+AAFE+L+ AR KGI GSISYSSLMGAC NA++WQKAL LYEDIK INLKPTVSMM
Sbjct: 712 GKLEAAFEVLEEARTKGINLGSISYSSLMGACCNAQNWQKALELYEDIKGINLKPTVSMM 771
Query: 1489 NALV 1478
NAL+
Sbjct: 772 NALI 775
Score = 488 bits (1257), Expect(2) = 0.0
Identities = 246/331 (74%), Positives = 281/331 (84%)
Frame = -2
Query: 1479 CEADQLQKATEVLFEMKRQGLSPNTITYSILLVASEKKDDLEVGLKLLSQAKKDGVAPNL 1300
C ADQ QKA E+ EMK+ L PNTITYS LLVASEKKDDL+VGL LLS AKKDGVAPNL
Sbjct: 779 CYADQYQKALEIFSEMKKVDLCPNTITYSTLLVASEKKDDLDVGLMLLSHAKKDGVAPNL 838
Query: 1299 VMCRCLIGMCLRRFQQACALGEPVFSLKAGYLQLDSKWTSLALMVYREAVVAGVAPTVEE 1120
VMCRCL+ MC RRFQ+AC LGEPV S +G LQLDSKWTSLALMVYRE + AGV PT+EE
Sbjct: 839 VMCRCLLAMCSRRFQKACTLGEPVLSNNSGRLQLDSKWTSLALMVYRETIGAGVVPTIEE 898
Query: 1119 LSQVLGCLQLPRDGSLRRRLIENLGVSTDTSKGSKLCSLVDGFGEYDPRAFSLLEEAASL 940
LS VLGCLQLP D SL+ RLIENLG++ +TSKGS LCSL+DGFGEYDPRA SLLEEAASL
Sbjct: 899 LSLVLGCLQLPCDASLKERLIENLGLTVETSKGSNLCSLIDGFGEYDPRACSLLEEAASL 958
Query: 939 GIVPAVSLKRSPIIVDVRNLPTHAAEVYILTVLKGLKHRLAAGVRLPNLSILLPLEKTQI 760
GIVP S K SPI+VDVRNL HAA+VY+LTVLK LKHRLAAG ++PN+SILLP+E++ I
Sbjct: 959 GIVPLTSFKGSPIVVDVRNLHIHAAQVYLLTVLKSLKHRLAAGAKIPNISILLPVEQSHI 1018
Query: 759 QTPSGEKTIKVAGRISQAVAAVLRRLGLHFLGNESHGKVRINGVALKKWFQPKLDSPFSG 580
QTP+GEKTIK+AGRI++AVAA+LRRLGL + GNES GK+RINGV +K+WFQPKL+SPFS
Sbjct: 1019 QTPTGEKTIKIAGRINRAVAALLRRLGLPYQGNESFGKIRINGVIVKRWFQPKLESPFSW 1078
Query: 579 KPTDLSSFQRRLGKGIIYQQRNIRTGNLSLD 487
+ TD S Q RL KGI +QQR IRTG+LSLD
Sbjct: 1079 EQTDFSFSQTRLRKGISHQQRTIRTGDLSLD 1109
Score = 67.8 bits (164), Expect = 8e-08
Identities = 49/220 (22%), Positives = 98/220 (44%), Gaps = 5/220 (2%)
Frame = -1
Query: 2512 RDGRLNDCIEMLEDMESKGL-LDMDKVYHAGFFKACKSQKAVKEAFRFTKLIPN----PT 2348
+ G ++ ++L +M+++ ++ D++ KAC + V A ++I T
Sbjct: 603 QSGAVDRAFDVLSEMKAEARPIEPDQITIGALMKACANAGQVDRALEVYRMIDKCDIKGT 662
Query: 2347 LSTFNMLMSVCASSQDSEGAFEVLPLVQEARLTADCKLYTTLISTCARAGKVDAMFKVFH 2168
+ + ++ C+ + + E A + + + + D + LI GK++A F+V
Sbjct: 663 PEVYTIAVNCCSQNGNWEFARSIYDDMSKKGVNPDEMFISALIDVAGHTGKLEAAFEVLE 722
Query: 2167 EMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMQSKNVKPDRVVFNALITACGESG 1988
E G+ +Y +L+ C A KA Y ++ N+KP + NALITA +
Sbjct: 723 EARTKGINLGSISYSSLMGACCNAQNWQKALELYEDIKGINLKPTVSMMNALITALCYAD 782
Query: 1987 AVDRAFDVLAEMMSEIHPIDPDHITVGALMKACIRAGQID 1868
+A ++ +EM + P+ IT L+ A + +D
Sbjct: 783 QYQKALEIFSEMKKV--DLCPNTITYSTLLVASEKKDDLD 820
>ref|XP_007041957.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao] gi|508705892|gb|EOX97788.1| Pentatricopeptide
repeat-containing protein, putative [Theobroma cacao]
Length = 1110
Score = 619 bits (1595), Expect(2) = 0.0
Identities = 377/769 (49%), Positives = 473/769 (61%), Gaps = 20/769 (2%)
Frame = -1
Query: 3724 CHCSPLLRKEIFGTGHNLRPSG--LRFRRQCRKPGFRFQFHSRNFLLRXXXXXXXXXXXX 3551
C PL+ ++ G H LRP G R++ + GF + HS F++R
Sbjct: 26 CTNRPLISRQFLGFNHTLRPPGGASSLRKKNKTLGF-LRLHSPRFIVRASIDSNLVLVVI 84
Query: 3550 XXXXXXXXXXVLVFHSYSRR-RNNAQDKQMSGKLTHPLLQHIKSR---MNYLSAQVFIL- 3386
L Y+R R K +SG L Q + + +QV +
Sbjct: 85 GVTALSA----LSLACYNRFFRKIGSSKTVSGSSHSALPQQRLGKDGAVQTAESQVLDIG 140
Query: 3385 -LNKNIPIDETVDLPTEMSNNTFHHDDIVAETRIDEISVMNGATLATNTSELSICEMTAS 3209
L K DL E+ T+ + A + E +V N +L TS+ S + A
Sbjct: 141 DLKKENFAKGKDDLKEEIKEATYASESKEALLQFQETTVANDDSLLHKTSDSSGADCLAV 200
Query: 3208 VVDDSLHTRESEGRSVXXXXXXXXXXEAIGSTL-NRKSSEMQLERCGHESGSVSKETMLL 3032
+ + ES + A+ + + SE+ LE + + L
Sbjct: 201 TANGFDVSEESGATDLPLPPTVLLESGAVEPLMFAAEMSELHLEEVERVNEFEADLPRLA 260
Query: 3031 VEKEPFTASFFPVNVQSRVTEFGRLDCESLTEGEQVEPDLIHREDLYTFYEAPM------ 2870
VE E +S + V E +T + + + RE+L+TFYEA
Sbjct: 261 VEPESSASSVLVKDAHVLVGE------GEVTRHYDIFKESV-REELHTFYEADQLVAKSS 313
Query: 2869 AKLNGLGAQSSGI-SLHKNGNSSLFKASVVDGEQFLRQQLSHHAEKTEGHEKRHVGYYNN 2693
LNGL SS + S + N SSL + S + Q + A+ EG + N
Sbjct: 314 TNLNGLKPASSRVFSPNSNSFSSLMQNSELKRAQLSSKNCLQTADMAEGKVAQACS--NR 371
Query: 2692 GSSHRKKDMGKRKESPAYKDSAKLHEHRSKIL----FPTHNLEGKHTHDRNRLPQPFSGY 2525
SSH+++D G+ +E P +D K H + K FP N G +++R F Y
Sbjct: 372 VSSHKRQDFGRGREIP--RDKGKRHSIQEKNTKLPKFPFPN--GMLADNKHRPEDHFRSY 427
Query: 2524 SKLLRDGRLNDCIEMLEDMESKGLLDMDKVYHAGFFKACKSQKAVKEAFRFTKLIPNPTL 2345
++LLRDGRL+DC+++LEDME +GLLDM+KVYHA FFK C QKAVKEAF FTKLIPNPTL
Sbjct: 428 NRLLRDGRLSDCVDLLEDMEQRGLLDMNKVYHAKFFKICNRQKAVKEAFCFTKLIPNPTL 487
Query: 2344 STFNMLMSVCASSQDSEGAFEVLPLVQEARLTADCKLYTTLISTCARAGKVDAMFKVFHE 2165
STFNMLMSVCASSQDS+GAFEVL +VQEA ADCKLYTTLISTCA++GKVD MF+VFHE
Sbjct: 488 STFNMLMSVCASSQDSDGAFEVLRIVQEAGFKADCKLYTTLISTCAKSGKVDTMFEVFHE 547
Query: 2164 MVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMQSKNVKPDRVVFNALITACGESGA 1985
MVN+GVEPNV+TYGALIDGCA+AGQVAKAFGAYGIM+SKNVKPDRVVFNALITACG+SGA
Sbjct: 548 MVNSGVEPNVNTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGA 607
Query: 1984 VDRAFDVLAEMMSEIHPIDPDHITVGALMKACIRAGQIDRAREVYKMLDKYNIKGTPEVY 1805
VDRAFDVLAEMM+E PIDPDH+TVGAL+KAC A Q+DRAREVYKM+ +++IKGTPEVY
Sbjct: 608 VDRAFDVLAEMMAETQPIDPDHVTVGALIKACSNADQVDRAREVYKMIHEFSIKGTPEVY 667
Query: 1804 TIAVNSCSQKGDWEFACAVYSDMTRRGVAPDEMFISALIDVAGHAGNLDAAFEILKVARA 1625
TIAVN CSQ GDWEFAC+VYSDM +GVAPDE+FISALIDVAGHAG LDAAFEIL+ A+
Sbjct: 668 TIAVNCCSQTGDWEFACSVYSDMKGKGVAPDEVFISALIDVAGHAGKLDAAFEILEEAKN 727
Query: 1624 KGIPSGSISYSSLMGACSNAKDWQKALLLYEDIKDINLKPTVSMMNALV 1478
+GI G +SYSSLMGACSNA++WQKAL LYE+IK + L TVS +NAL+
Sbjct: 728 QGINVGIVSYSSLMGACSNARNWQKALELYENIKAVKLNLTVSTVNALI 776
Score = 474 bits (1220), Expect(2) = 0.0
Identities = 231/331 (69%), Positives = 279/331 (84%)
Frame = -2
Query: 1479 CEADQLQKATEVLFEMKRQGLSPNTITYSILLVASEKKDDLEVGLKLLSQAKKDGVAPNL 1300
CEADQL KA E+L EM+ GL PNT+TYSILLVASE+KDDLEVGL LLSQA+KDGVAPNL
Sbjct: 780 CEADQLPKAMEILSEMEELGLCPNTVTYSILLVASERKDDLEVGLMLLSQARKDGVAPNL 839
Query: 1299 VMCRCLIGMCLRRFQQACALGEPVFSLKAGYLQLDSKWTSLALMVYREAVVAGVAPTVEE 1120
+M RC+IGMCLRRF++AC +GEPV S +G +++KWTS+AL VYRE +VAG APT++
Sbjct: 840 IMARCIIGMCLRRFEKACKVGEPVLSFNSGQPHIENKWTSVALAVYRETIVAGTAPTMDV 899
Query: 1119 LSQVLGCLQLPRDGSLRRRLIENLGVSTDTSKGSKLCSLVDGFGEYDPRAFSLLEEAASL 940
+SQ+LGCLQLPRD SL+ RL+ENL VS D ++ S L SL+DGFGEYDPRAFSLLEEAAS
Sbjct: 900 ISQILGCLQLPRDDSLKSRLVENLDVSADATRCSSLSSLIDGFGEYDPRAFSLLEEAASF 959
Query: 939 GIVPAVSLKRSPIIVDVRNLPTHAAEVYILTVLKGLKHRLAAGVRLPNLSILLPLEKTQI 760
GIVP VS K SPI+VD R L + AEVY+LT+LKGLKHR AAG +LP++S+LLPLEKTQ+
Sbjct: 960 GIVPCVSFKESPIVVDARELQINMAEVYLLTILKGLKHRRAAGAKLPSISVLLPLEKTQV 1019
Query: 759 QTPSGEKTIKVAGRISQAVAAVLRRLGLHFLGNESHGKVRINGVALKKWFQPKLDSPFSG 580
TP EK+I +AGRI QA+AA+LRR+GL + GNES GK+RING+ALK+WFQPKL SPF+G
Sbjct: 1020 LTPEREKSINLAGRIGQAIAALLRRIGLPYQGNESFGKIRINGLALKRWFQPKLASPFTG 1079
Query: 579 KPTDLSSFQRRLGKGIIYQQRNIRTGNLSLD 487
KP + ++ Q RLGKGI +QQRNIRTGNLSLD
Sbjct: 1080 KPGEWNASQMRLGKGISHQQRNIRTGNLSLD 1110
Score = 81.3 bits (199), Expect = 7e-12
Identities = 75/323 (23%), Positives = 132/323 (40%), Gaps = 44/323 (13%)
Frame = -1
Query: 2524 SKLLRDGRLNDCIEMLEDMESKGLLDMDKVYHAGFFKACKSQKAVKEAFRFTKLIPN--- 2354
S + G+++ E+ +M + G+ Y A C V +AF ++ +
Sbjct: 530 STCAKSGKVDTMFEVFHEMVNSGVEPNVNTYGA-LIDGCARAGQVAKAFGAYGIMRSKNV 588
Query: 2353 -PTLSTFNMLMSVCASSQDSEGAFEVLP--LVQEARLTADCKLYTTLISTCARAGKVDA- 2186
P FN L++ C S + AF+VL + + + D LI C+ A +VD
Sbjct: 589 KPDRVVFNALITACGQSGAVDRAFDVLAEMMAETQPIDPDHVTVGALIKACSNADQVDRA 648
Query: 2185 --MFKVFHEMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMQSKNVKPDRVVFNAL 2012
++K+ HE G P V+T ++ C++ G A Y M+ K V PD V +AL
Sbjct: 649 REVYKMIHEFSIKGT-PEVYTIA--VNCCSQTGDWEFACSVYSDMKGKGVAPDEVFISAL 705
Query: 2011 ITACGESGAVDRAFDVLAEMMSEIHPIDPDHITVGALMKAC------------------- 1889
I G +G +D AF++L E ++ I+ ++ +LM AC
Sbjct: 706 IDVAGHAGKLDAAFEILEEAKNQ--GINVGIVSYSSLMGACSNARNWQKALELYENIKAV 763
Query: 1888 ----------------IRAGQIDRAREVYKMLDKYNIKGTPEVYTIAVNSCSQKGDWEFA 1757
A Q+ +A E+ +++ + Y+I + + +K D E
Sbjct: 764 KLNLTVSTVNALITSLCEADQLPKAMEILSEMEELGLCPNTVTYSILLVASERKDDLEVG 823
Query: 1756 CAVYSDMTRRGVAPDEMFISALI 1688
+ S + GVAP+ + +I
Sbjct: 824 LMLLSQARKDGVAPNLIMARCII 846
>ref|XP_004231448.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic isoform X1 [Solanum lycopersicum]
Length = 1182
Score = 595 bits (1534), Expect(2) = 0.0
Identities = 330/567 (58%), Positives = 391/567 (68%), Gaps = 17/567 (2%)
Frame = -1
Query: 3127 AIGSTLNRKSSEMQLERCGHESGSVSKETMLLVEKEPFTASFFPVNVQSRVTEFGRLDCE 2948
A+ S+ +S + L+ HE+ + T V E A F +N+ +R + +D E
Sbjct: 297 AVPSSFMEESKNINLQEHLHETKMSNILTTEEVSSERSVALFPTINIDNRTEKTKIMDQE 356
Query: 2947 SLTEGEQVEPD--------LIH--------REDLYTFYEAPMAKLNGLGAQSSGISLHKN 2816
+ + E + +IH REDLY+F+ A LNG A +S S
Sbjct: 357 LMMKDELKKAHRFVAEDEVIIHNLIFRDSTREDLYSFFGASSKSLNGQDALTSHASRQGI 416
Query: 2815 GN-SSLFKASVVDGEQFLRQQLSHHAEKTEGHEKRHVGYYNNGSSHRKKDMGKRKESPAY 2639
G S KA V E F EKR G Y K+D KR +
Sbjct: 417 GTFSPPSKAFSVRAEDF--------------EEKRSHGCYKE-RPFNKEDFVKRMQQFTN 461
Query: 2638 KDSAKLHEHRSKILFPTHNLEGKHTHDRNRLPQPFSGYSKLLRDGRLNDCIEMLEDMESK 2459
K+ + L ++ + N + DR F Y LR+GRL DCI++LEDME
Sbjct: 462 KEKSILSDNGASKQLQVSNPKSIQVCDRPNPSDQFRAYRHFLREGRLMDCIKILEDMERH 521
Query: 2458 GLLDMDKVYHAGFFKACKSQKAVKEAFRFTKLIPNPTLSTFNMLMSVCASSQDSEGAFEV 2279
G L+MDKVYHAGFF+ CKSQKAVKEAFRFTKLI NPTLSTFNML+SVCASS+D E AF+V
Sbjct: 522 GSLNMDKVYHAGFFQVCKSQKAVKEAFRFTKLIQNPTLSTFNMLLSVCASSRDLERAFQV 581
Query: 2278 LPLVQEARLTADCKLYTTLISTCARAGKVDAMFKVFHEMVNAGVEPNVHTYGALIDGCAK 2099
L LV+E L DCKLYTTLISTCA+AGKVD MF+VFHEMVNAGVEPN +TYGALIDGCAK
Sbjct: 582 LQLVRETGLKPDCKLYTTLISTCAKAGKVDTMFEVFHEMVNAGVEPNANTYGALIDGCAK 641
Query: 2098 AGQVAKAFGAYGIMQSKNVKPDRVVFNALITACGESGAVDRAFDVLAEMMSEIHPIDPDH 1919
AGQVAKAFGAYGIM+SKNVKPDRVVFNALITACG+SGAVDRAFDVL+EM +E PI+PD
Sbjct: 642 AGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLSEMKAEARPIEPDQ 701
Query: 1918 ITVGALMKACIRAGQIDRAREVYKMLDKYNIKGTPEVYTIAVNSCSQKGDWEFACAVYSD 1739
IT+GALMKAC +GQ+DRA EVY+M+DK +IKGTPEVYTIAVN CSQ G+WEFA ++Y D
Sbjct: 702 ITIGALMKACANSGQVDRALEVYRMIDKCDIKGTPEVYTIAVNCCSQNGNWEFARSIYDD 761
Query: 1738 MTRRGVAPDEMFISALIDVAGHAGNLDAAFEILKVARAKGIPSGSISYSSLMGACSNAKD 1559
M+++GV PDEMFISALIDVAGH G L+AAFE+L+ ARAKGI GSISYSSLMGAC NAK+
Sbjct: 762 MSKKGVNPDEMFISALIDVAGHTGKLEAAFEVLEEARAKGINLGSISYSSLMGACCNAKN 821
Query: 1558 WQKALLLYEDIKDINLKPTVSMMNALV 1478
WQKAL LYEDIK INLKPTVSMMNAL+
Sbjct: 822 WQKALELYEDIKGINLKPTVSMMNALI 848
Score = 484 bits (1246), Expect(2) = 0.0
Identities = 243/331 (73%), Positives = 280/331 (84%)
Frame = -2
Query: 1479 CEADQLQKATEVLFEMKRQGLSPNTITYSILLVASEKKDDLEVGLKLLSQAKKDGVAPNL 1300
C ADQ QKA E+ EMKR L PNTITYS LLVASEKKDDL+VGL LLS AKKDGVAPNL
Sbjct: 852 CYADQYQKALEIFSEMKRVDLCPNTITYSTLLVASEKKDDLDVGLMLLSHAKKDGVAPNL 911
Query: 1299 VMCRCLIGMCLRRFQQACALGEPVFSLKAGYLQLDSKWTSLALMVYREAVVAGVAPTVEE 1120
VMCRCL+ MC RRFQ+AC LGEPV S +G LQLDSKWTSLALMVYRE + AGV PT+EE
Sbjct: 912 VMCRCLLAMCSRRFQKACTLGEPVLSNNSGRLQLDSKWTSLALMVYRETIGAGVVPTIEE 971
Query: 1119 LSQVLGCLQLPRDGSLRRRLIENLGVSTDTSKGSKLCSLVDGFGEYDPRAFSLLEEAASL 940
LS VLGCLQLPRD S++ RLIENLG++ +TSKGS LCSL+DGFGEYDPRA SLLEEAASL
Sbjct: 972 LSLVLGCLQLPRDASIKERLIENLGLTVETSKGSNLCSLIDGFGEYDPRACSLLEEAASL 1031
Query: 939 GIVPAVSLKRSPIIVDVRNLPTHAAEVYILTVLKGLKHRLAAGVRLPNLSILLPLEKTQI 760
GIVP S K SPI+VDVRNL HAA+VY+LTVLK LKHRLAAG ++PN+SI+LP+E++ I
Sbjct: 1032 GIVPLTSFKGSPIVVDVRNLHIHAAQVYLLTVLKSLKHRLAAGAKIPNISIVLPVEQSHI 1091
Query: 759 QTPSGEKTIKVAGRISQAVAAVLRRLGLHFLGNESHGKVRINGVALKKWFQPKLDSPFSG 580
QTP+G+KTIK+AGRI++AVAA+LRRL L + GNES GK+RINGV +K+WFQPKL+SPFS
Sbjct: 1092 QTPTGQKTIKIAGRINRAVAALLRRLRLPYQGNESFGKIRINGVIMKRWFQPKLESPFSW 1151
Query: 579 KPTDLSSFQRRLGKGIIYQQRNIRTGNLSLD 487
+ T S Q RL KGI +QQR IRTG+LSLD
Sbjct: 1152 EQTGFSFSQTRLRKGISHQQRTIRTGDLSLD 1182
Score = 67.0 bits (162), Expect = 1e-07
Identities = 49/220 (22%), Positives = 98/220 (44%), Gaps = 5/220 (2%)
Frame = -1
Query: 2512 RDGRLNDCIEMLEDMESKGL-LDMDKVYHAGFFKACKSQKAVKEAFRFTKLIPN----PT 2348
+ G ++ ++L +M+++ ++ D++ KAC + V A ++I T
Sbjct: 676 QSGAVDRAFDVLSEMKAEARPIEPDQITIGALMKACANSGQVDRALEVYRMIDKCDIKGT 735
Query: 2347 LSTFNMLMSVCASSQDSEGAFEVLPLVQEARLTADCKLYTTLISTCARAGKVDAMFKVFH 2168
+ + ++ C+ + + E A + + + + D + LI GK++A F+V
Sbjct: 736 PEVYTIAVNCCSQNGNWEFARSIYDDMSKKGVNPDEMFISALIDVAGHTGKLEAAFEVLE 795
Query: 2167 EMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMQSKNVKPDRVVFNALITACGESG 1988
E G+ +Y +L+ C A KA Y ++ N+KP + NALITA +
Sbjct: 796 EARAKGINLGSISYSSLMGACCNAKNWQKALELYEDIKGINLKPTVSMMNALITALCYAD 855
Query: 1987 AVDRAFDVLAEMMSEIHPIDPDHITVGALMKACIRAGQID 1868
+A ++ +EM + P+ IT L+ A + +D
Sbjct: 856 QYQKALEIFSEMKRV--DLCPNTITYSTLLVASEKKDDLD 893
>ref|XP_010315357.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic isoform X2 [Solanum lycopersicum]
Length = 1151
Score = 595 bits (1534), Expect(2) = 0.0
Identities = 330/567 (58%), Positives = 391/567 (68%), Gaps = 17/567 (2%)
Frame = -1
Query: 3127 AIGSTLNRKSSEMQLERCGHESGSVSKETMLLVEKEPFTASFFPVNVQSRVTEFGRLDCE 2948
A+ S+ +S + L+ HE+ + T V E A F +N+ +R + +D E
Sbjct: 266 AVPSSFMEESKNINLQEHLHETKMSNILTTEEVSSERSVALFPTINIDNRTEKTKIMDQE 325
Query: 2947 SLTEGEQVEPD--------LIH--------REDLYTFYEAPMAKLNGLGAQSSGISLHKN 2816
+ + E + +IH REDLY+F+ A LNG A +S S
Sbjct: 326 LMMKDELKKAHRFVAEDEVIIHNLIFRDSTREDLYSFFGASSKSLNGQDALTSHASRQGI 385
Query: 2815 GN-SSLFKASVVDGEQFLRQQLSHHAEKTEGHEKRHVGYYNNGSSHRKKDMGKRKESPAY 2639
G S KA V E F EKR G Y K+D KR +
Sbjct: 386 GTFSPPSKAFSVRAEDF--------------EEKRSHGCYKE-RPFNKEDFVKRMQQFTN 430
Query: 2638 KDSAKLHEHRSKILFPTHNLEGKHTHDRNRLPQPFSGYSKLLRDGRLNDCIEMLEDMESK 2459
K+ + L ++ + N + DR F Y LR+GRL DCI++LEDME
Sbjct: 431 KEKSILSDNGASKQLQVSNPKSIQVCDRPNPSDQFRAYRHFLREGRLMDCIKILEDMERH 490
Query: 2458 GLLDMDKVYHAGFFKACKSQKAVKEAFRFTKLIPNPTLSTFNMLMSVCASSQDSEGAFEV 2279
G L+MDKVYHAGFF+ CKSQKAVKEAFRFTKLI NPTLSTFNML+SVCASS+D E AF+V
Sbjct: 491 GSLNMDKVYHAGFFQVCKSQKAVKEAFRFTKLIQNPTLSTFNMLLSVCASSRDLERAFQV 550
Query: 2278 LPLVQEARLTADCKLYTTLISTCARAGKVDAMFKVFHEMVNAGVEPNVHTYGALIDGCAK 2099
L LV+E L DCKLYTTLISTCA+AGKVD MF+VFHEMVNAGVEPN +TYGALIDGCAK
Sbjct: 551 LQLVRETGLKPDCKLYTTLISTCAKAGKVDTMFEVFHEMVNAGVEPNANTYGALIDGCAK 610
Query: 2098 AGQVAKAFGAYGIMQSKNVKPDRVVFNALITACGESGAVDRAFDVLAEMMSEIHPIDPDH 1919
AGQVAKAFGAYGIM+SKNVKPDRVVFNALITACG+SGAVDRAFDVL+EM +E PI+PD
Sbjct: 611 AGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLSEMKAEARPIEPDQ 670
Query: 1918 ITVGALMKACIRAGQIDRAREVYKMLDKYNIKGTPEVYTIAVNSCSQKGDWEFACAVYSD 1739
IT+GALMKAC +GQ+DRA EVY+M+DK +IKGTPEVYTIAVN CSQ G+WEFA ++Y D
Sbjct: 671 ITIGALMKACANSGQVDRALEVYRMIDKCDIKGTPEVYTIAVNCCSQNGNWEFARSIYDD 730
Query: 1738 MTRRGVAPDEMFISALIDVAGHAGNLDAAFEILKVARAKGIPSGSISYSSLMGACSNAKD 1559
M+++GV PDEMFISALIDVAGH G L+AAFE+L+ ARAKGI GSISYSSLMGAC NAK+
Sbjct: 731 MSKKGVNPDEMFISALIDVAGHTGKLEAAFEVLEEARAKGINLGSISYSSLMGACCNAKN 790
Query: 1558 WQKALLLYEDIKDINLKPTVSMMNALV 1478
WQKAL LYEDIK INLKPTVSMMNAL+
Sbjct: 791 WQKALELYEDIKGINLKPTVSMMNALI 817
Score = 484 bits (1246), Expect(2) = 0.0
Identities = 243/331 (73%), Positives = 280/331 (84%)
Frame = -2
Query: 1479 CEADQLQKATEVLFEMKRQGLSPNTITYSILLVASEKKDDLEVGLKLLSQAKKDGVAPNL 1300
C ADQ QKA E+ EMKR L PNTITYS LLVASEKKDDL+VGL LLS AKKDGVAPNL
Sbjct: 821 CYADQYQKALEIFSEMKRVDLCPNTITYSTLLVASEKKDDLDVGLMLLSHAKKDGVAPNL 880
Query: 1299 VMCRCLIGMCLRRFQQACALGEPVFSLKAGYLQLDSKWTSLALMVYREAVVAGVAPTVEE 1120
VMCRCL+ MC RRFQ+AC LGEPV S +G LQLDSKWTSLALMVYRE + AGV PT+EE
Sbjct: 881 VMCRCLLAMCSRRFQKACTLGEPVLSNNSGRLQLDSKWTSLALMVYRETIGAGVVPTIEE 940
Query: 1119 LSQVLGCLQLPRDGSLRRRLIENLGVSTDTSKGSKLCSLVDGFGEYDPRAFSLLEEAASL 940
LS VLGCLQLPRD S++ RLIENLG++ +TSKGS LCSL+DGFGEYDPRA SLLEEAASL
Sbjct: 941 LSLVLGCLQLPRDASIKERLIENLGLTVETSKGSNLCSLIDGFGEYDPRACSLLEEAASL 1000
Query: 939 GIVPAVSLKRSPIIVDVRNLPTHAAEVYILTVLKGLKHRLAAGVRLPNLSILLPLEKTQI 760
GIVP S K SPI+VDVRNL HAA+VY+LTVLK LKHRLAAG ++PN+SI+LP+E++ I
Sbjct: 1001 GIVPLTSFKGSPIVVDVRNLHIHAAQVYLLTVLKSLKHRLAAGAKIPNISIVLPVEQSHI 1060
Query: 759 QTPSGEKTIKVAGRISQAVAAVLRRLGLHFLGNESHGKVRINGVALKKWFQPKLDSPFSG 580
QTP+G+KTIK+AGRI++AVAA+LRRL L + GNES GK+RINGV +K+WFQPKL+SPFS
Sbjct: 1061 QTPTGQKTIKIAGRINRAVAALLRRLRLPYQGNESFGKIRINGVIMKRWFQPKLESPFSW 1120
Query: 579 KPTDLSSFQRRLGKGIIYQQRNIRTGNLSLD 487
+ T S Q RL KGI +QQR IRTG+LSLD
Sbjct: 1121 EQTGFSFSQTRLRKGISHQQRTIRTGDLSLD 1151
Score = 67.0 bits (162), Expect = 1e-07
Identities = 49/220 (22%), Positives = 98/220 (44%), Gaps = 5/220 (2%)
Frame = -1
Query: 2512 RDGRLNDCIEMLEDMESKGL-LDMDKVYHAGFFKACKSQKAVKEAFRFTKLIPN----PT 2348
+ G ++ ++L +M+++ ++ D++ KAC + V A ++I T
Sbjct: 645 QSGAVDRAFDVLSEMKAEARPIEPDQITIGALMKACANSGQVDRALEVYRMIDKCDIKGT 704
Query: 2347 LSTFNMLMSVCASSQDSEGAFEVLPLVQEARLTADCKLYTTLISTCARAGKVDAMFKVFH 2168
+ + ++ C+ + + E A + + + + D + LI GK++A F+V
Sbjct: 705 PEVYTIAVNCCSQNGNWEFARSIYDDMSKKGVNPDEMFISALIDVAGHTGKLEAAFEVLE 764
Query: 2167 EMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMQSKNVKPDRVVFNALITACGESG 1988
E G+ +Y +L+ C A KA Y ++ N+KP + NALITA +
Sbjct: 765 EARAKGINLGSISYSSLMGACCNAKNWQKALELYEDIKGINLKPTVSMMNALITALCYAD 824
Query: 1987 AVDRAFDVLAEMMSEIHPIDPDHITVGALMKACIRAGQID 1868
+A ++ +EM + P+ IT L+ A + +D
Sbjct: 825 QYQKALEIFSEMKRV--DLCPNTITYSTLLVASEKKDDLD 862
>ref|XP_002534048.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223525928|gb|EEF28334.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1129
Score = 630 bits (1624), Expect(2) = 0.0
Identities = 387/787 (49%), Positives = 481/787 (61%), Gaps = 41/787 (5%)
Frame = -1
Query: 3715 SPLLRKEIFGTGHNLRPSG----LRFRRQCRKPGFRFQFHSRNFLLRXXXXXXXXXXXXX 3548
S +R++ G HNLRP G LR R+ +K R + S++ L+
Sbjct: 27 SSFIRRQFLGCSHNLRPPGSASPLRGRKS-KKIKIREKNQSQSLLINASFRLDSVLVVVA 85
Query: 3547 XXXXXXXXXVLVFHSYSRRRNNAQDKQMSGKLTHPLLQHIKSRMNYLSAQVFILLNKNIP 3368
+ H ++ + NN + K L L Q K+ +N + F+ +
Sbjct: 86 VSTFSALSFAYLHHHFTNK-NNKKRKTSKEDLGDGLSQLGKNIVNNIVRSPFLDVGHLHK 144
Query: 3367 IDETV------DLPTEMSNNTFHHDDI--------VAETRIDEISVMNGATLATNTSEL- 3233
+ T DL N++ +++ V T D+ S + L+ TS L
Sbjct: 145 VTSTTLEVKSKDLVDNARENSYVIENVLPNETSVLVESTESDKNSYVIENALSNETSVLV 204
Query: 3232 --------SICEMTASVVDDSLHTRESEGRSVXXXXXXXXXXEAIGSTLN--RKSSEMQL 3083
S +S V + +++S+ SV L R+ SE+ +
Sbjct: 205 ESTESDNNSADFTVSSNVCTYVVSKQSDNASVLLDPVPVIHGSESVLPLEFARELSELTI 264
Query: 3082 ERCGHESGSVSKETMLLVEKEPFTASFFPVNVQSRVTEFGRLDCESLTEGEQVEPDLIH- 2906
ER E+ S+ T LL EK TAS + E G+ D G D+
Sbjct: 265 ERSRDETEVDSELTQLLEEKSNDTAS------STMNDEIGKKD------GISSYYDITKK 312
Query: 2905 --REDLYTFYEAPMA------KLNGLGAQSSGISLHKNGNSSLFKASVVDGE-QFLRQQL 2753
REDLY FYE + LNGL SS + N S K + V E + L Q
Sbjct: 313 SAREDLYKFYEESQSTEKSPSNLNGLDTVSSHAAPLIGNNISSLKVNGVGKEAELLSPQS 372
Query: 2752 SHHAEKTEGHEKRHVGYYNNGSSHRKKDMGKRKESPAYKDSAKL--HEHRSKILFPTHNL 2579
AE E K H+ Y G+S + + +G R+ P K+ + EH + FP N
Sbjct: 373 PQFAETVE--RKVHLARYERGASRKNEHIGGRRGFPREKEKGHVIQDEHTNLPEFPYPN- 429
Query: 2578 EGKHTHDRNRLPQPFSGYSKLLRDGRLNDCIEMLEDMESKGLLDMDKVYHAGFFKACKSQ 2399
G H+ +++ + GY++LLRDGRL +C+++LEDME +GLLDM K+YHA FFK CK Q
Sbjct: 430 -GVHSTNKDHKAEQVHGYNRLLRDGRLAECVDLLEDMERRGLLDMSKIYHAKFFKICKIQ 488
Query: 2398 KAVKEAFRFTKLIPNPTLSTFNMLMSVCASSQDSEGAFEVLPLVQEARLTADCKLYTTLI 2219
KAVKEAFRF KL+PNP+LSTFNMLMSVC+SSQDS+GAFEVL L Q A L ADCKLYTTLI
Sbjct: 489 KAVKEAFRFCKLVPNPSLSTFNMLMSVCSSSQDSDGAFEVLRLAQGAGLKADCKLYTTLI 548
Query: 2218 STCARAGKVDAMFKVFHEMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMQSKNVK 2039
STCA++GKVDAMF+VFHEMVNAGVEPNVHTYG+LIDGCAKAGQ+AKAFGAYGI++SKNVK
Sbjct: 549 STCAKSGKVDAMFEVFHEMVNAGVEPNVHTYGSLIDGCAKAGQMAKAFGAYGILRSKNVK 608
Query: 2038 PDRVVFNALITACGESGAVDRAFDVLAEMMSEIHPIDPDHITVGALMKACIRAGQIDRAR 1859
PDRVVFNALITACG+SGAVDRAFDVLAEM +E HPIDPDHITVGALMKAC +AGQ+DRA+
Sbjct: 609 PDRVVFNALITACGQSGAVDRAFDVLAEMGAETHPIDPDHITVGALMKACAKAGQVDRAK 668
Query: 1858 EVYKMLDKYNIKGTPEVYTIAVNSCSQKGDWEFACAVYSDMTRRGVAPDEMFISALIDVA 1679
EVY ML KYNIKGTPEVYTIAVN CSQ GDWEFA +VY DMTR+GVAPDEMF+SAL+DVA
Sbjct: 669 EVYNMLHKYNIKGTPEVYTIAVNFCSQTGDWEFARSVYDDMTRKGVAPDEMFLSALVDVA 728
Query: 1678 GHAGNLDAAFEILKVARAKGIPSGSISYSSLMGACSNAKDWQKALLLYEDIKDINLKPTV 1499
GHAG +D AFE L+ AR +G G + YSSLMGACSNAK+WQKAL LYEDIK I LKPTV
Sbjct: 729 GHAGLVDIAFETLQEARTQGTQLGIVPYSSLMGACSNAKNWQKALELYEDIKAIKLKPTV 788
Query: 1498 SMMNALV 1478
S MNAL+
Sbjct: 789 STMNALM 795
Score = 442 bits (1138), Expect(2) = 0.0
Identities = 219/331 (66%), Positives = 268/331 (80%)
Frame = -2
Query: 1479 CEADQLQKATEVLFEMKRQGLSPNTITYSILLVASEKKDDLEVGLKLLSQAKKDGVAPNL 1300
C+ DQLQKA E L EMK GL PN +TYSILLVASE+KDDL+ G LLSQAK+D + P
Sbjct: 799 CDGDQLQKALETLSEMKSFGLCPNIVTYSILLVASERKDDLDAGDMLLSQAKEDCITPTF 858
Query: 1299 VMCRCLIGMCLRRFQQACALGEPVFSLKAGYLQLDSKWTSLALMVYREAVVAGVAPTVEE 1120
+M +C+IGMCLRR+++AC+LGE + S +G Q+ ++WTS AL VYRE + AG PT+E
Sbjct: 859 LMYKCIIGMCLRRYKKACSLGESILSFDSGRPQIKNEWTSRALTVYRETIAAGEKPTMEV 918
Query: 1119 LSQVLGCLQLPRDGSLRRRLIENLGVSTDTSKGSKLCSLVDGFGEYDPRAFSLLEEAASL 940
+SQVLGCLQLP D SL+ RL+ENLGV+ D SK S LC+LVDGFGEYDPRAFSLLEEAASL
Sbjct: 919 VSQVLGCLQLPCDASLKGRLVENLGVTADPSKFSNLCALVDGFGEYDPRAFSLLEEAASL 978
Query: 939 GIVPAVSLKRSPIIVDVRNLPTHAAEVYILTVLKGLKHRLAAGVRLPNLSILLPLEKTQI 760
G VP S K SPI++D + L +H AEVY+LT+LKGLKHRLAAG +LPN++ILLP E TQI
Sbjct: 979 GTVPCASFKESPIVMDAKLLQSHIAEVYLLTILKGLKHRLAAGAKLPNITILLPTEMTQI 1038
Query: 759 QTPSGEKTIKVAGRISQAVAAVLRRLGLHFLGNESHGKVRINGVALKKWFQPKLDSPFSG 580
+T GEKTI +AGRISQ VA++LRRLGL + GNES+GK+RING++L++W QPKL SPFSG
Sbjct: 1039 KTLKGEKTINLAGRISQDVASLLRRLGLPYQGNESYGKIRINGISLRRWLQPKLASPFSG 1098
Query: 579 KPTDLSSFQRRLGKGIIYQQRNIRTGNLSLD 487
KP +LS R+GKGI +QQRNIRTGNLSL+
Sbjct: 1099 KPEELSFSLSRIGKGITHQQRNIRTGNLSLN 1129
Score = 65.5 bits (158), Expect = 4e-07
Identities = 56/260 (21%), Positives = 109/260 (41%), Gaps = 5/260 (1%)
Frame = -1
Query: 2512 RDGRLNDCIEMLEDMESKGL-LDMDKVYHAGFFKACKSQKAVKEAFRFTKLIPN----PT 2348
+ G ++ ++L +M ++ +D D + KAC V A ++ T
Sbjct: 623 QSGAVDRAFDVLAEMGAETHPIDPDHITVGALMKACAKAGQVDRAKEVYNMLHKYNIKGT 682
Query: 2347 LSTFNMLMSVCASSQDSEGAFEVLPLVQEARLTADCKLYTTLISTCARAGKVDAMFKVFH 2168
+ + ++ C+ + D E A V + + D + L+ AG VD F+
Sbjct: 683 PEVYTIAVNFCSQTGDWEFARSVYDDMTRKGVAPDEMFLSALVDVAGHAGLVDIAFETLQ 742
Query: 2167 EMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMQSKNVKPDRVVFNALITACGESG 1988
E G + + Y +L+ C+ A KA Y +++ +KP NAL+TA +
Sbjct: 743 EARTQGTQLGIVPYSSLMGACSNAKNWQKALELYEDIKAIKLKPTVSTMNALMTALCDGD 802
Query: 1987 AVDRAFDVLAEMMSEIHPIDPDHITVGALMKACIRAGQIDRAREVYKMLDKYNIKGTPEV 1808
+ +A + L+EM S + P+ +T L+ A R +D + + I T +
Sbjct: 803 QLQKALETLSEMKS--FGLCPNIVTYSILLVASERKDDLDAGDMLLSQAKEDCITPTFLM 860
Query: 1807 YTIAVNSCSQKGDWEFACAV 1748
Y + C ++ ++ AC++
Sbjct: 861 YKCIIGMCLRR--YKKACSL 878
>ref|XP_012084399.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic [Jatropha curcas]
gi|643715661|gb|KDP27602.1| hypothetical protein
JCGZ_19607 [Jatropha curcas]
Length = 1112
Score = 600 bits (1546), Expect(2) = 0.0
Identities = 364/770 (47%), Positives = 472/770 (61%), Gaps = 27/770 (3%)
Frame = -1
Query: 3706 LRKEIFGTGHNLRPSGLRFR-RQCRKPGFRFQFHSRNFLLRXXXXXXXXXXXXXXXXXXX 3530
+R+E G HNLRP G R +CRK R + S++ LL
Sbjct: 30 IRREFLGCSHNLRPPGGSLRVGKCRKVKIR-RSQSQSLLLNASFGSESVLVAVAVSTLSA 88
Query: 3529 XXXVLVFHSYSRRRNNAQD-KQMSGKLTHPLLQHIKSRMNYL----SAQVFILLNKNIPI 3365
+ + N +D K+ SG Q K+ +N++ SA V L ++I
Sbjct: 89 ISFAYLNQQITSNNGNRKDSKEASGSPGLGSSQLGKNIVNHVIQTPSADVGNSL-RSILA 147
Query: 3364 DETVDLPTEMSNNTFHHDDIVAETRIDEISVMNGATLATNTSELSICEMTASVVDDSLHT 3185
E+ +L + N+ + ++ E ++ + +++ TSE + S V + +
Sbjct: 148 TESENLVEKAIENSHAIEGEETVVQVCENTLRSTSSILFETSEYDNADFPVSNVSNYVVP 207
Query: 3184 RESEGR--SVXXXXXXXXXXEAIGSTLN-RKSSEMQLERCGHESG--SVSKETMLLVEKE 3020
+ESE SV + + LN R SE+ LE+ G+E+ V E L+E+
Sbjct: 208 KESEATNVSVSKESAIPESEKVLPLVLNARGMSELTLEKSGNETDVHEVDAELTHLMEQM 267
Query: 3019 PFTASFFPVNVQSRVTEFGRLDCESLTEGEQVEPDLIH-------REDLYTFYEAPMA-- 2867
+ PVN ++ GE+++ H REDLY FY+ +
Sbjct: 268 SNNTASPPVNYEA---------------GEKIDLSSYHGIIKESAREDLYMFYDKSQSVV 312
Query: 2866 ----KLNGLGAQSSGISLHKNGNSSLFKAS-VVDGEQFLRQQLSHHAEKTEGHEKRHVGY 2702
LNG + SS S + S FK + +V QQ AE + +K + +
Sbjct: 313 KSPLNLNGSNSVSSHASPSIGNSFSSFKVNGIVKEADSSAQQSPKIAESVD--KKVRLAH 370
Query: 2701 YNNGSSHRKKDMGKRKESPAYKDSAKLHEHRSKIL--FPTHNLEGKHTHDRNRLPQPFSG 2528
Y SS + ++ +R+ P K+ + ++ L FP N G H D++ Q
Sbjct: 371 YVRESSRKNENTRRRRGFPTEKEKGRPVQNNQIKLPEFPYPN--GVHVIDKDHPSQQVHA 428
Query: 2527 YSKLLRDGRLNDCIEMLEDMESKGLLDMDKVYHAGFFKACKSQKAVKEAFRFTKLIPNPT 2348
Y++LLRDGRL +C+ +LEDME +GLLDM+K+YHA FFK CK QKAV EAFRF KL+PNPT
Sbjct: 429 YNRLLRDGRLTECVSLLEDMERRGLLDMNKIYHAKFFKICKIQKAVNEAFRFCKLVPNPT 488
Query: 2347 LSTFNMLMSVCASSQDSEGAFEVLPLVQEARLTADCKLYTTLISTCARAGKVDAMFKVFH 2168
LST+NMLMSVCASSQDS GAF+VL L + + L ADC+LYTTLISTCA++GKVD MF+VFH
Sbjct: 489 LSTYNMLMSVCASSQDSSGAFQVLQLARGSGLKADCRLYTTLISTCAKSGKVDTMFEVFH 548
Query: 2167 EMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMQSKNVKPDRVVFNALITACGESG 1988
+MVNAGVEPNVHTYGALIDGCA+AGQ+AKAFGAYGIM SK VKPDRVVFNALI ACG+SG
Sbjct: 549 KMVNAGVEPNVHTYGALIDGCARAGQLAKAFGAYGIMSSKKVKPDRVVFNALINACGQSG 608
Query: 1987 AVDRAFDVLAEMMSEIHPIDPDHITVGALMKACIRAGQIDRAREVYKMLDKYNIKGTPEV 1808
AVDRAFDVLAEM +E PIDPDHITVGAL+ AC +AGQI+RA+EVY M+ ++NIKGTPEV
Sbjct: 609 AVDRAFDVLAEMRAETQPIDPDHITVGALINACAKAGQINRAKEVYNMMHEFNIKGTPEV 668
Query: 1807 YTIAVNSCSQKGDWEFACAVYSDMTRRGVAPDEMFISALIDVAGHAGNLDAAFEILKVAR 1628
YTIAVN CSQ GDWEFA +VY DM R+ VAPDEMF+SALIDVAGHAG +D AFEIL+ AR
Sbjct: 669 YTIAVNCCSQTGDWEFARSVYDDMKRKDVAPDEMFLSALIDVAGHAGKVDVAFEILQEAR 728
Query: 1627 AKGIPSGSISYSSLMGACSNAKDWQKALLLYEDIKDINLKPTVSMMNALV 1478
+G+ G I YSSLMGACSNAK+WQKAL LYEDIK I + PTV +NAL+
Sbjct: 729 IQGMQLGIIPYSSLMGACSNAKNWQKALELYEDIKSIKVNPTVPTLNALI 778
Score = 462 bits (1190), Expect(2) = 0.0
Identities = 227/331 (68%), Positives = 275/331 (83%)
Frame = -2
Query: 1479 CEADQLQKATEVLFEMKRQGLSPNTITYSILLVASEKKDDLEVGLKLLSQAKKDGVAPNL 1300
C+ DQL KA EV+ EMK L PNT+TYSIL VASE+KDDLEVGL+LLSQAK+D +AP L
Sbjct: 782 CDGDQLPKAIEVMSEMKSFRLCPNTVTYSILFVASERKDDLEVGLRLLSQAKEDCIAPTL 841
Query: 1299 VMCRCLIGMCLRRFQQACALGEPVFSLKAGYLQLDSKWTSLALMVYREAVVAGVAPTVEE 1120
+M +C+IGMCLRR+++ CALGEPV S +G Q+ ++WTSLALMVYRE + AG T+E
Sbjct: 842 IMYKCIIGMCLRRYEKVCALGEPVLSFDSGRPQMKNEWTSLALMVYRETIAAGEKLTMEV 901
Query: 1119 LSQVLGCLQLPRDGSLRRRLIENLGVSTDTSKGSKLCSLVDGFGEYDPRAFSLLEEAASL 940
+SQVLGCLQLP D SL+ RL+ENLGV+TD+SK S LCSLVDGFGEYDPRAFSLLEEAASL
Sbjct: 902 VSQVLGCLQLPFDASLKHRLVENLGVTTDSSKVSNLCSLVDGFGEYDPRAFSLLEEAASL 961
Query: 939 GIVPAVSLKRSPIIVDVRNLPTHAAEVYILTVLKGLKHRLAAGVRLPNLSILLPLEKTQI 760
GI+P VS K SPIIVD + L +H A+VY+LT+LKGLKHRLAAG RLPN++ILLP E Q+
Sbjct: 962 GIIPCVSFKESPIIVDAKALQSHVAQVYLLTILKGLKHRLAAGARLPNITILLPTETAQV 1021
Query: 759 QTPSGEKTIKVAGRISQAVAAVLRRLGLHFLGNESHGKVRINGVALKKWFQPKLDSPFSG 580
+ P GEKTI +A R+SQ VAA+LRRL LH+ GNES+GK+RING++LK+WFQPKL PFSG
Sbjct: 1022 KVPEGEKTINIAARVSQDVAALLRRLRLHYQGNESYGKIRINGISLKRWFQPKLAYPFSG 1081
Query: 579 KPTDLSSFQRRLGKGIIYQQRNIRTGNLSLD 487
KP +L+S R+GK I +QQRNIRTGNLSL+
Sbjct: 1082 KPEELNSSLLRIGKDISHQQRNIRTGNLSLE 1112
Score = 70.5 bits (171), Expect = 1e-08
Identities = 58/260 (22%), Positives = 110/260 (42%), Gaps = 5/260 (1%)
Frame = -1
Query: 2512 RDGRLNDCIEMLEDMESKGL-LDMDKVYHAGFFKACKSQKAVKEAFRFTKLIPN----PT 2348
+ G ++ ++L +M ++ +D D + AC + A ++ T
Sbjct: 606 QSGAVDRAFDVLAEMRAETQPIDPDHITVGALINACAKAGQINRAKEVYNMMHEFNIKGT 665
Query: 2347 LSTFNMLMSVCASSQDSEGAFEVLPLVQEARLTADCKLYTTLISTCARAGKVDAMFKVFH 2168
+ + ++ C+ + D E A V ++ + D + LI AGKVD F++
Sbjct: 666 PEVYTIAVNCCSQTGDWEFARSVYDDMKRKDVAPDEMFLSALIDVAGHAGKVDVAFEILQ 725
Query: 2167 EMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMQSKNVKPDRVVFNALITACGESG 1988
E G++ + Y +L+ C+ A KA Y ++S V P NALITA +
Sbjct: 726 EARIQGMQLGIIPYSSLMGACSNAKNWQKALELYEDIKSIKVNPTVPTLNALITALCDGD 785
Query: 1987 AVDRAFDVLAEMMSEIHPIDPDHITVGALMKACIRAGQIDRAREVYKMLDKYNIKGTPEV 1808
+ +A +V++EM S + P+ +T L A R ++ + + I T +
Sbjct: 786 QLPKAIEVMSEMKS--FRLCPNTVTYSILFVASERKDDLEVGLRLLSQAKEDCIAPTLIM 843
Query: 1807 YTIAVNSCSQKGDWEFACAV 1748
Y + C ++ +E CA+
Sbjct: 844 YKCIIGMCLRR--YEKVCAL 861
>ref|XP_002306163.2| hypothetical protein POPTR_0004s17400g [Populus trichocarpa]
gi|550341229|gb|EEE86674.2| hypothetical protein
POPTR_0004s17400g [Populus trichocarpa]
Length = 1104
Score = 609 bits (1570), Expect(2) = 0.0
Identities = 343/633 (54%), Positives = 423/633 (66%), Gaps = 14/633 (2%)
Frame = -1
Query: 3334 SNNTFHHDDIVAETRIDEISVMNGATLATNTSELSICEMTASVVDDSLHTRESE---GRS 3164
S N+ ++ + E + ++G++L E S A+ V D++ ESE R
Sbjct: 160 SENSHEFEEKETHVQFQETASLHGSSLLIKAVESSGANFVAANVCDTVVVEESEVGDARV 219
Query: 3163 VXXXXXXXXXXEAIGSTLNRKSSEMQLERCGHESGSVSKETMLLVEKEPFTASFFPVNVQ 2984
A+ + +E+ E+ G E E VEK A PV+ +
Sbjct: 220 SPLPSVLSESGSALPLIFATQMTELTQEKSGEEI-EFGSELSGSVEKVKSNAVLVPVDNE 278
Query: 2983 SRVTEFGRLDCESLTEGEQVEPDLIHREDLYTFYEAPMAKLN-----GLGAQSSGISLHK 2819
S E L + + V REDLYTFY A + + GL SS SL K
Sbjct: 279 S--IEKAELSSYNGAISQSV------REDLYTFYGANRSVVKSASNLGLKETSSHASLLK 330
Query: 2818 NGNSSLFKASV-VDGEQFLRQQ---LSHHAEKTEGHEKRHVGYYNNGSSHRKKDM--GKR 2657
+ S K + ++ E QQ + H +KT +Y GS H+ K++ K
Sbjct: 331 SKRFSSLKMNTGLETEDLSSQQPLQAADHVQKT-----MPPAHYEGGSFHKSKNLPGSKE 385
Query: 2656 KESPAYKDSAKLHEHRSKILFPTHNLEGKHTHDRNRLPQPFSGYSKLLRDGRLNDCIEML 2477
++ P +KL + P+ N G + ++ P+ ++ Y++LLR+GRL +C+++L
Sbjct: 386 RKHPIQDSHSKLRQ------LPSPN--GIPSKVKDHPPEEYNAYNRLLREGRLAECLDLL 437
Query: 2476 EDMESKGLLDMDKVYHAGFFKACKSQKAVKEAFRFTKLIPNPTLSTFNMLMSVCASSQDS 2297
EDME +GLLDM+KVYH FFK C+SQKAVKEAFRF KL+ NPTLSTFNMLMSVCA+SQ+S
Sbjct: 438 EDMERRGLLDMNKVYHVKFFKLCRSQKAVKEAFRFCKLVQNPTLSTFNMLMSVCATSQNS 497
Query: 2296 EGAFEVLPLVQEARLTADCKLYTTLISTCARAGKVDAMFKVFHEMVNAGVEPNVHTYGAL 2117
GAFEVL L + L ADCKLYTTLISTCA++GKVDAMF+VFHEMVNAGVEPNVHTYGAL
Sbjct: 498 AGAFEVLQLAKAVGLKADCKLYTTLISTCAKSGKVDAMFEVFHEMVNAGVEPNVHTYGAL 557
Query: 2116 IDGCAKAGQVAKAFGAYGIMQSKNVKPDRVVFNALITACGESGAVDRAFDVLAEMMSEIH 1937
IDGCA+AGQVAKAFGAYGIM+SKNVKPDRVVFNALITACG+SGAVDRAFDVLAEM E
Sbjct: 558 IDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMTGEAQ 617
Query: 1936 PIDPDHITVGALMKACIRAGQIDRAREVYKMLDKYNIKGTPEVYTIAVNSCSQKGDWEFA 1757
PIDPDHITVGAL+KAC AGQ+DRA+EVY M+ KYNIKGTPEVYTIA+NSCSQ GDWEFA
Sbjct: 618 PIDPDHITVGALIKACTNAGQVDRAQEVYNMVHKYNIKGTPEVYTIAINSCSQIGDWEFA 677
Query: 1756 CAVYSDMTRRGVAPDEMFISALIDVAGHAGNLDAAFEILKVARAKGIPSGSISYSSLMGA 1577
C VY DMTR+GV PDEMF+SALIDVAGHAG +DAAFEI++VA+AKG G I YSSLMGA
Sbjct: 678 CKVYDDMTRKGVVPDEMFLSALIDVAGHAGKMDAAFEIIQVAKAKGAQLGIIPYSSLMGA 737
Query: 1576 CSNAKDWQKALLLYEDIKDINLKPTVSMMNALV 1478
C NAK+WQK L LYEDIK + +KPTV+ MNAL+
Sbjct: 738 CCNAKNWQKGLELYEDIKSMKIKPTVATMNALI 770
Score = 452 bits (1164), Expect(2) = 0.0
Identities = 225/331 (67%), Positives = 270/331 (81%)
Frame = -2
Query: 1479 CEADQLQKATEVLFEMKRQGLSPNTITYSILLVASEKKDDLEVGLKLLSQAKKDGVAPNL 1300
C+ DQL KA EVL EMK GL PNTITYSIL VASE+KDDLE GL LLSQAKKD VAP L
Sbjct: 774 CDGDQLPKALEVLSEMKAWGLRPNTITYSILSVASERKDDLEAGLMLLSQAKKDCVAPTL 833
Query: 1299 VMCRCLIGMCLRRFQQACALGEPVFSLKAGYLQLDSKWTSLALMVYREAVVAGVAPTVEE 1120
+M +C+I MCLR+F+ AC LGE V S +G Q+++KWTS+ALMVYR + AG PT+E
Sbjct: 834 IMSKCIISMCLRKFENACTLGEAVLSFNSGRAQIENKWTSVALMVYRGTMAAGEKPTIEL 893
Query: 1119 LSQVLGCLQLPRDGSLRRRLIENLGVSTDTSKGSKLCSLVDGFGEYDPRAFSLLEEAASL 940
+SQVLGCLQ+P D +L+ RL+ENLGV+ +S+ S LCSLVDGFGEYDPRAFSLLEEAASL
Sbjct: 894 VSQVLGCLQIPCDATLKNRLVENLGVTAVSSRYSNLCSLVDGFGEYDPRAFSLLEEAASL 953
Query: 939 GIVPAVSLKRSPIIVDVRNLPTHAAEVYILTVLKGLKHRLAAGVRLPNLSILLPLEKTQI 760
GIVP VS K SPI +D + L H AEVY LT+LKGLKHRLAAG +LPN++ILLP+EK Q+
Sbjct: 954 GIVPCVSFKESPITMDAKQLQIHIAEVYFLTILKGLKHRLAAGAKLPNVTILLPVEKAQV 1013
Query: 759 QTPSGEKTIKVAGRISQAVAAVLRRLGLHFLGNESHGKVRINGVALKKWFQPKLDSPFSG 580
T GEKTI VAGRIS+AVA++LRRLGL + GNES+GK+RING++L++W QPKLDSPFSG
Sbjct: 1014 ITLEGEKTINVAGRISRAVASLLRRLGLPYQGNESYGKIRINGISLRRWLQPKLDSPFSG 1073
Query: 579 KPTDLSSFQRRLGKGIIYQQRNIRTGNLSLD 487
KP + S+ RLGKGI +QQRNIRTG+ SL+
Sbjct: 1074 KPGEWSTSLSRLGKGISFQQRNIRTGDFSLE 1104
Score = 70.9 bits (172), Expect = 9e-09
Identities = 79/367 (21%), Positives = 146/367 (39%), Gaps = 28/367 (7%)
Frame = -1
Query: 2512 RDGRLNDCIEMLEDMESKGL-LDMDKVYHAGFFKACKSQKAVKEAFRFTKLIPN----PT 2348
+ G ++ ++L +M + +D D + KAC + V A ++ T
Sbjct: 598 QSGAVDRAFDVLAEMTGEAQPIDPDHITVGALIKACTNAGQVDRAQEVYNMVHKYNIKGT 657
Query: 2347 LSTFNMLMSVCASSQDSEGAFEVLPLVQEARLTADCKLYTTLISTCARAGKVDAMFKVFH 2168
+ + ++ C+ D E A +V + + D + LI AGK+DA F++
Sbjct: 658 PEVYTIAINSCSQIGDWEFACKVYDDMTRKGVVPDEMFLSALIDVAGHAGKMDAAFEIIQ 717
Query: 2167 EMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMQSKNVKPDRVVFNALITACGESG 1988
G + + Y +L+ C A K Y ++S +KP NALITA +
Sbjct: 718 VAKAKGAQLGIIPYSSLMGACCNAKNWQKGLELYEDIKSMKIKPTVATMNALITALCDGD 777
Query: 1987 AVDRAFDVLAEMMSEIHPIDPDHITVGALMKACIRAGQIDRAREVYKMLDKYNIKGTPEV 1808
+ +A +VL+EM + + P+ IT L A R ++ + K + T +
Sbjct: 778 QLPKALEVLSEM--KAWGLRPNTITYSILSVASERKDDLEAGLMLLSQAKKDCVAPTLIM 835
Query: 1807 YTIAVNSCSQKGDWEFAC----AVYSDMTRRGVAPDEMFISALI-----DVAGHAGNLDA 1655
++ C +K +E AC AV S + R ++ AL+ AG ++
Sbjct: 836 SKCIISMCLRK--FENACTLGEAVLSFNSGRAQIENKWTSVALMVYRGTMAAGEKPTIEL 893
Query: 1654 AFEIL-------------KVARAKGIPSGSISYSSLMGACSNAKDWQ-KALLLYEDIKDI 1517
++L ++ G+ + S YS+L ++ +A L E+ +
Sbjct: 894 VSQVLGCLQIPCDATLKNRLVENLGVTAVSSRYSNLCSLVDGFGEYDPRAFSLLEEAASL 953
Query: 1516 NLKPTVS 1496
+ P VS
Sbjct: 954 GIVPCVS 960
>ref|XP_006494587.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic-like isoform X1 [Citrus sinensis]
Length = 1072
Score = 609 bits (1571), Expect(2) = 0.0
Identities = 303/444 (68%), Positives = 357/444 (80%)
Frame = -1
Query: 2809 SSLFKASVVDGEQFLRQQLSHHAEKTEGHEKRHVGYYNNGSSHRKKDMGKRKESPAYKDS 2630
SSL + + G + Q+ AE EG K + + G SH+ K + + P +
Sbjct: 299 SSLKRDTEPKGPELSLQEALQTAEHVEG--KIRLACHREGPSHKIKARRRIRNFPRNNER 356
Query: 2629 AKLHEHRSKILFPTHNLEGKHTHDRNRLPQPFSGYSKLLRDGRLNDCIEMLEDMESKGLL 2450
L + K + GKH + + + + Y++L+R GR++DCI++LEDME KGLL
Sbjct: 357 INLMQDVGKNMLQFPYPNGKHANYAHDVSEQLHSYNRLIRQGRISDCIDLLEDMERKGLL 416
Query: 2449 DMDKVYHAGFFKACKSQKAVKEAFRFTKLIPNPTLSTFNMLMSVCASSQDSEGAFEVLPL 2270
DMDKVYHA FF CKSQKA+KEAFRF KL+PNPTLSTFNMLMSVCASS+DSEGAF+VL L
Sbjct: 417 DMDKVYHARFFNVCKSQKAIKEAFRFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRL 476
Query: 2269 VQEARLTADCKLYTTLISTCARAGKVDAMFKVFHEMVNAGVEPNVHTYGALIDGCAKAGQ 2090
VQEA L ADCKLYTTLI+TCA++GKVDAMF+VFHEMVNAG+EPNVHTYGALIDGCAKAGQ
Sbjct: 477 VQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQ 536
Query: 2089 VAKAFGAYGIMQSKNVKPDRVVFNALITACGESGAVDRAFDVLAEMMSEIHPIDPDHITV 1910
VAKAFGAYGIM+SKNVKPDRVVFNALITACG+SGAVDRAFDVLAEM +E+HP+DPDHIT+
Sbjct: 537 VAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITI 596
Query: 1909 GALMKACIRAGQIDRAREVYKMLDKYNIKGTPEVYTIAVNSCSQKGDWEFACAVYSDMTR 1730
GALMKAC AGQ+DRAREVYKM+ KYNIKGTPEVYTIA+N CSQ GDWEFAC+VY DMT+
Sbjct: 597 GALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTK 656
Query: 1729 RGVAPDEMFISALIDVAGHAGNLDAAFEILKVARAKGIPSGSISYSSLMGACSNAKDWQK 1550
+GV PDE+F+SALID AGHAG ++AAFEIL+ A+ +GI G ISYSSLMGACSNAK+WQK
Sbjct: 657 KGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQK 716
Query: 1549 ALLLYEDIKDINLKPTVSMMNALV 1478
AL LYE +K I LKPTVS MNAL+
Sbjct: 717 ALELYEHMKSIKLKPTVSTMNALI 740
Score = 449 bits (1154), Expect(2) = 0.0
Identities = 225/331 (67%), Positives = 270/331 (81%)
Frame = -2
Query: 1479 CEADQLQKATEVLFEMKRQGLSPNTITYSILLVASEKKDDLEVGLKLLSQAKKDGVAPNL 1300
C+ D+L K EVL +MK GL PNTITYSILLVA E+KDD+EVGL LLSQAK+DGV PNL
Sbjct: 744 CDGDRLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNL 803
Query: 1299 VMCRCLIGMCLRRFQQACALGEPVFSLKAGYLQLDSKWTSLALMVYREAVVAGVAPTVEE 1120
VM +C+IGMC RR+++A L E V S +G Q+++KWTSL LMVYREA+VAG PTVE
Sbjct: 804 VMFKCIIGMCSRRYEKARTLNEHVLSFNSGRPQIENKWTSLVLMVYREAIVAGTIPTVEV 863
Query: 1119 LSQVLGCLQLPRDGSLRRRLIENLGVSTDTSKGSKLCSLVDGFGEYDPRAFSLLEEAASL 940
+S+VLGCLQLP + +R RL+ENLGVS D K S LCSL+DGFGEYDPRAFSLLEEAAS
Sbjct: 864 VSKVLGCLQLPYNADIRERLVENLGVSADALKRSNLCSLIDGFGEYDPRAFSLLEEAASF 923
Query: 939 GIVPAVSLKRSPIIVDVRNLPTHAAEVYILTVLKGLKHRLAAGVRLPNLSILLPLEKTQI 760
GIVP VS K SP++VD R L H A+VY+LT+LKGL+HRLAAG +LPN++ILLP+EKTQI
Sbjct: 924 GIVPCVSFKESPVVVDARKLEIHTAKVYLLTILKGLRHRLAAGAKLPNVNILLPVEKTQI 983
Query: 759 QTPSGEKTIKVAGRISQAVAAVLRRLGLHFLGNESHGKVRINGVALKKWFQPKLDSPFSG 580
+ GEKTI +A R +QA+AA+LRRLGL + GN S+GK+RING+ALK+WFQPKL SPFSG
Sbjct: 984 MSVGGEKTIDIAERTTQAIAALLRRLGLPYQGNGSYGKIRINGLALKRWFQPKLASPFSG 1043
Query: 579 KPTDLSSFQRRLGKGIIYQQRNIRTGNLSLD 487
KP +LSS Q LGK I +QQRNIRTGNLSL+
Sbjct: 1044 KPGELSSLQ--LGKFITHQQRNIRTGNLSLE 1072
Score = 80.1 bits (196), Expect = 1e-11
Identities = 60/251 (23%), Positives = 112/251 (44%), Gaps = 5/251 (1%)
Frame = -1
Query: 2512 RDGRLNDCIEMLEDMESK-GLLDMDKVYHAGFFKACKSQKAVKEAFRFTKLIPN----PT 2348
+ G ++ ++L +M ++ +D D + KAC + V A K+I T
Sbjct: 568 QSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGT 627
Query: 2347 LSTFNMLMSVCASSQDSEGAFEVLPLVQEARLTADCKLYTTLISTCARAGKVDAMFKVFH 2168
+ + ++ C+ + D E A V + + + D + LI AGKV+A F++
Sbjct: 628 PEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQ 687
Query: 2167 EMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMQSKNVKPDRVVFNALITACGESG 1988
E N G+ + +Y +L+ C+ A KA Y M+S +KP NALITA +
Sbjct: 688 EAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGD 747
Query: 1987 AVDRAFDVLAEMMSEIHPIDPDHITVGALMKACIRAGQIDRAREVYKMLDKYNIKGTPEV 1808
+ + +VL++M S + P+ IT L+ AC R ++ + + + +
Sbjct: 748 RLPKTMEVLSDMKS--LGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVM 805
Query: 1807 YTIAVNSCSQK 1775
+ + CS++
Sbjct: 806 FKCIIGMCSRR 816
>ref|XP_010255160.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic isoform X1 [Nelumbo nucifera]
Length = 1161
Score = 598 bits (1542), Expect(2) = 0.0
Identities = 369/787 (46%), Positives = 487/787 (61%), Gaps = 44/787 (5%)
Frame = -1
Query: 3706 LRKEIFGTGHNLRPSGLRFRRQCRKPGFRFQ---------FHSRNFLLRXXXXXXXXXXX 3554
LR+E G+ LR G R RR+C+K GF Q +S+ FL+
Sbjct: 75 LRREFLGSCDRLRFPGARSRRKCKKLGFLIQSPRLLPRASLYSKPFLV------------ 122
Query: 3553 XXXXXXXXXXXVLVFHSYSRRRNNAQDKQMSGKLTHPLLQHIKSRMNYLSAQVFILLNKN 3374
+V+ ++RR+ +AQ+ SG Q++ LS Q N++
Sbjct: 123 -IVAIATFSALTVVYSVHTRRKKDAQES--SGTQDPDEFQNLA-----LSKQSRDFTNQS 174
Query: 3373 IPIDETVDL-------PTEMSNNTFH------HDDIVAETRIDEI---SVMNGATLATNT 3242
+ ++ +DL P E F H+++ E ++ + ++M + T
Sbjct: 175 VD-NQILDLEKISDGTPAEELKAIFEETSEKGHNNLEKEVQLSQFKKTALMFEESPFTEA 233
Query: 3241 SELS--ICEMTASVVDDSLHTRESEGRSVXXXXXXXXXXEAIGSTLNRKSSEMQLERCGH 3068
SELS +C +S++ T+E+E A G + +L G+
Sbjct: 234 SELSYSVCSTKSSIL-----TKETESMD-PTLSSPVLGESASGEKVRFAKDMPELVLKGY 287
Query: 3067 ESGSVSKETMLLVEKEPFTASFFPV-NVQSRVTEFGRLDCESLTEGEQVEPDLIH----- 2906
+ +V + + +P ++S + +V + V++ + E EGE V+ +
Sbjct: 288 QEEAVPWSELSGLLVDPKSSSVIHLKHVPAEVSQEHQFKNELDDEGE-VQVSTYNGFFRP 346
Query: 2905 --REDLYTFYEAPMAKLNGLGAQSS------GISLHKNGN-SSLFKASVVDGEQFLRQQL 2753
RE+++TFYE + + + SS ISL+ N N SSL + +++ G + +
Sbjct: 347 SFREEIHTFYEENQSGVRSISNFSSLKTVPPHISLNSNSNFSSLLRTNMLSGAEV--SEG 404
Query: 2752 SHHAEKTEGHEKRH-VGYYNNGSSHRKKDMGKRKESPAYKDSAKLHEHRSKILF-PTHNL 2579
H+ T+ HE++ + Y GS HR+KD K P ++ + L P N
Sbjct: 405 LHNT--TDYHERKMPLSCYKEGSCHRRKDFRIGKGFPRDTGKKLTPQNGDRNLHHPQPN- 461
Query: 2578 EGKHTHDRNRLPQPFSGYSKLLRDGRLNDCIEMLEDMESKGLLDMDKVYHAGFFKACKSQ 2399
G H DRN + Y++LL DGR+ DC+E+LED+E KGLLDM+KVYHA FF CKSQ
Sbjct: 462 -GLHVSDRNDISGSIDAYNRLLSDGRVTDCVELLEDLERKGLLDMNKVYHAKFFNTCKSQ 520
Query: 2398 KAVKEAFRFTKLIPNPTLSTFNMLMSVCASSQDSEGAFEVLPLVQEARLTADCKLYTTLI 2219
KAV EAFRF KLI NPT+STFNML+SVCAS QDS+GAF+VL V+EA L ADCKLYTTLI
Sbjct: 521 KAVNEAFRFIKLISNPTMSTFNMLLSVCASCQDSDGAFQVLQFVKEAGLKADCKLYTTLI 580
Query: 2218 STCARAGKVDAMFKVFHEMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMQSKNVK 2039
STCA++GKVDAMF+VFHEMVNAGVEPNVHTYGALIDGCA+AGQVAKAFGAYGIM+SK VK
Sbjct: 581 STCAKSGKVDAMFEVFHEMVNAGVEPNVHTYGALIDGCARAGQVAKAFGAYGIMRSKKVK 640
Query: 2038 PDRVVFNALITACGESGAVDRAFDVLAEMMSEIHPIDPDHITVGALMKACIRAGQIDRAR 1859
PDRVVFNALITACG+SGAVDRAFDVLAEM +E PIDPDH+TVGAL+K C +AGQ+DRAR
Sbjct: 641 PDRVVFNALITACGQSGAVDRAFDVLAEMRTENQPIDPDHVTVGALIKTCTQAGQVDRAR 700
Query: 1858 EVYKMLDKYNIKGTPEVYTIAVNSCSQKGDWEFACAVYSDMTRRGVAPDEMFISALIDVA 1679
EVY M+ +YNIKGTP+VYTIAVNSCSQ GD +FA +YSDM R GV PDEMF+SALIDVA
Sbjct: 701 EVYMMIHEYNIKGTPDVYTIAVNSCSQTGDLDFALNIYSDMRRNGVVPDEMFLSALIDVA 760
Query: 1678 GHAGNLDAAFEILKVARAKGIPSGSISYSSLMGACSNAKDWQKALLLYEDIKDINLKPTV 1499
GHAG LD AF+I++ A+ +G+ G++SYSSLMGACSNAK+WQKA LYE+I I L PTV
Sbjct: 761 GHAGKLDVAFQIIEDAKKQGMQLGNVSYSSLMGACSNAKNWQKAQELYENIMAIKLHPTV 820
Query: 1498 SMMNALV 1478
SMMNAL+
Sbjct: 821 SMMNALI 827
Score = 457 bits (1176), Expect(2) = 0.0
Identities = 224/331 (67%), Positives = 273/331 (82%)
Frame = -2
Query: 1479 CEADQLQKATEVLFEMKRQGLSPNTITYSILLVASEKKDDLEVGLKLLSQAKKDGVAPNL 1300
CE +QLQKA +VL EMK G+ P ITYSILLVA EKKD+LE+G LLS+AKK+G+ PNL
Sbjct: 831 CEGNQLQKAVKVLDEMKEIGICPENITYSILLVACEKKDELELGFTLLSEAKKEGIVPNL 890
Query: 1299 VMCRCLIGMCLRRFQQACALGEPVFSLKAGYLQLDSKWTSLALMVYREAVVAGVAPTVEE 1120
+MCRCL GMCLRRF+++ ++GEPV S +G Q+++KWTSLALMVYRE +VAGV PT+E
Sbjct: 891 IMCRCLTGMCLRRFEKSSSMGEPVLSFSSGKPQVNNKWTSLALMVYRETIVAGVVPTMEV 950
Query: 1119 LSQVLGCLQLPRDGSLRRRLIENLGVSTDTSKGSKLCSLVDGFGEYDPRAFSLLEEAASL 940
SQVLGCLQLPRD SLR RL+ENLGV+T +SK S + SL+DGFGEYD R+FSLLEEAASL
Sbjct: 951 FSQVLGCLQLPRDTSLRERLVENLGVNTSSSKHSSIYSLIDGFGEYDSRSFSLLEEAASL 1010
Query: 939 GIVPAVSLKRSPIIVDVRNLPTHAAEVYILTVLKGLKHRLAAGVRLPNLSILLPLEKTQI 760
G+VP VS K SPI+VD R L H AEVY LT+L+GLKHRLAAG +LPN++ILLPLEKT+
Sbjct: 1011 GVVPCVSFKESPIVVDTRKLDVHTAEVYFLTILRGLKHRLAAGAKLPNVTILLPLEKTKF 1070
Query: 759 QTPSGEKTIKVAGRISQAVAAVLRRLGLHFLGNESHGKVRINGVALKKWFQPKLDSPFSG 580
+ G +TI +AGRI QA+A++LRRL L + GNES+GK+RING+ALK+WFQPKLDSPFSG
Sbjct: 1071 MSNKGNRTINLAGRIGQAIASLLRRLRLTYQGNESYGKIRINGLALKRWFQPKLDSPFSG 1130
Query: 579 KPTDLSSFQRRLGKGIIYQQRNIRTGNLSLD 487
KP +LSS RLGKGI QQR+IR+ LSL+
Sbjct: 1131 KPAELSSSPTRLGKGISDQQRSIRSSKLSLE 1161
>ref|XP_008236179.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic [Prunus mume]
Length = 1065
Score = 587 bits (1512), Expect(2) = 0.0
Identities = 302/476 (63%), Positives = 358/476 (75%)
Frame = -1
Query: 2905 REDLYTFYEAPMAKLNGLGAQSSGISLHKNGNSSLFKASVVDGEQFLRQQLSHHAEKTEG 2726
RE+L+ FYE+ + A S SL+ SS + V G + Q H E EG
Sbjct: 278 REELHMFYESNKS------ATKSVASLNGKKPSSFLRNITVTGADLIPQASHHTTESIEG 331
Query: 2725 HEKRHVGYYNNGSSHRKKDMGKRKESPAYKDSAKLHEHRSKILFPTHNLEGKHTHDRNRL 2546
H +H +KD+GK + K+ L + S + + G HT+DR+ L
Sbjct: 332 H------------THSRKDLGKGSGYSSDKEVRHLPKKNSGTMTQFPHPHGIHTNDRDLL 379
Query: 2545 PQPFSGYSKLLRDGRLNDCIEMLEDMESKGLLDMDKVYHAGFFKACKSQKAVKEAFRFTK 2366
+ S Y +LL+DGRL D +++LEDME +GLLDM+KVYHA FF+ CKSQKAV +AFRF K
Sbjct: 380 SEQLSAYHRLLKDGRLGDSLKLLEDMERRGLLDMNKVYHARFFEICKSQKAVDKAFRFIK 439
Query: 2365 LIPNPTLSTFNMLMSVCASSQDSEGAFEVLPLVQEARLTADCKLYTTLISTCARAGKVDA 2186
LIPNPTLST+NMLM+VCASSQDSE AF VL LV+EA + DCKLYTTLISTC ++GKV
Sbjct: 440 LIPNPTLSTYNMLMTVCASSQDSEEAFHVLRLVREAGMKPDCKLYTTLISTCGKSGKVYT 499
Query: 2185 MFKVFHEMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMQSKNVKPDRVVFNALIT 2006
MF VFHEMVNAGVEPNVHTYGALIDGC +AG+VAKAFGAYGIM+SK VKPDRVVFNALIT
Sbjct: 500 MFDVFHEMVNAGVEPNVHTYGALIDGCGRAGEVAKAFGAYGIMRSKKVKPDRVVFNALIT 559
Query: 2005 ACGESGAVDRAFDVLAEMMSEIHPIDPDHITVGALMKACIRAGQIDRAREVYKMLDKYNI 1826
ACG+SGAVDRAFDVL EMM+E PI+PDH T+GAL+KAC AGQ+DRAREVYKM+ KY I
Sbjct: 560 ACGQSGAVDRAFDVLGEMMAETQPIEPDHTTIGALIKACANAGQVDRAREVYKMVHKYKI 619
Query: 1825 KGTPEVYTIAVNSCSQKGDWEFACAVYSDMTRRGVAPDEMFISALIDVAGHAGNLDAAFE 1646
KG+ EVYTIAVN CSQ GDWEFAC VYSDMTR+GV PDEMF+SALIDVAGHAG LDAAFE
Sbjct: 620 KGSSEVYTIAVNCCSQTGDWEFACNVYSDMTRKGVVPDEMFLSALIDVAGHAGKLDAAFE 679
Query: 1645 ILKVARAKGIPSGSISYSSLMGACSNAKDWQKALLLYEDIKDINLKPTVSMMNALV 1478
IL+ AR +GI G++SYSSLMGACSNAK+WQKAL LYE +K ++ TVS +NAL+
Sbjct: 680 ILQEARNQGIQLGTVSYSSLMGACSNAKNWQKALELYEYLKSTKIEKTVSTVNALI 735
Score = 464 bits (1195), Expect(2) = 0.0
Identities = 236/331 (71%), Positives = 277/331 (83%)
Frame = -2
Query: 1479 CEADQLQKATEVLFEMKRQGLSPNTITYSILLVASEKKDDLEVGLKLLSQAKKDGVAPNL 1300
C+ DQLQKA EVL EMK GL PN+ITYSI+LVASEKKDDLE G LLSQA+KDGVAPNL
Sbjct: 739 CDGDQLQKAMEVLSEMKGFGLHPNSITYSIILVASEKKDDLEAGHMLLSQAEKDGVAPNL 798
Query: 1299 VMCRCLIGMCLRRFQQACALGEPVFSLKAGYLQLDSKWTSLALMVYREAVVAGVAPTVEE 1120
VMCRC+IGMCLRR ++AC+LGEPV S Q+DSKW S+ALMVYR+ +VAG+ PTVE
Sbjct: 799 VMCRCIIGMCLRRSEKACSLGEPVLSRDRP--QVDSKWASMALMVYRKTIVAGIMPTVEV 856
Query: 1119 LSQVLGCLQLPRDGSLRRRLIENLGVSTDTSKGSKLCSLVDGFGEYDPRAFSLLEEAASL 940
+SQVLGCLQLP D S + RLIENLGV+ DTS+ S LCSL+DGFGEYDPRAFSLLEEAASL
Sbjct: 857 ISQVLGCLQLPYDASFKNRLIENLGVTADTSRPSNLCSLIDGFGEYDPRAFSLLEEAASL 916
Query: 939 GIVPAVSLKRSPIIVDVRNLPTHAAEVYILTVLKGLKHRLAAGVRLPNLSILLPLEKTQI 760
GIVP VS K SPI+VD R L H AEV+ILTVLKGLKHRLAAG +LPN+SILLP+EKTQI
Sbjct: 917 GIVPCVSFKASPIVVDARKLQLHTAEVFILTVLKGLKHRLAAGAKLPNMSILLPVEKTQI 976
Query: 759 QTPSGEKTIKVAGRISQAVAAVLRRLGLHFLGNESHGKVRINGVALKKWFQPKLDSPFSG 580
+P G KTI +AGR+ Q+VAA+LRRLG+ + GNES GK++I+G+A+K+W QPKL S F+G
Sbjct: 977 MSPKG-KTINIAGRVGQSVAALLRRLGIPYQGNESRGKIKISGLAMKRWLQPKLAS-FTG 1034
Query: 579 KPTDLSSFQRRLGKGIIYQQRNIRTGNLSLD 487
KP + S Q +LGKGI +QQRNIRTGNLSL+
Sbjct: 1035 KPGEFGSSQLQLGKGITHQQRNIRTGNLSLE 1065
Score = 72.0 bits (175), Expect = 4e-09
Identities = 55/260 (21%), Positives = 112/260 (43%), Gaps = 5/260 (1%)
Frame = -1
Query: 2512 RDGRLNDCIEMLEDMESKGL-LDMDKVYHAGFFKACKSQKAVKEAFRFTKLIPNPTLS-- 2342
+ G ++ ++L +M ++ ++ D KAC + V A K++ +
Sbjct: 563 QSGAVDRAFDVLGEMMAETQPIEPDHTTIGALIKACANAGQVDRAREVYKMVHKYKIKGS 622
Query: 2341 --TFNMLMSVCASSQDSEGAFEVLPLVQEARLTADCKLYTTLISTCARAGKVDAMFKVFH 2168
+ + ++ C+ + D E A V + + D + LI AGK+DA F++
Sbjct: 623 SEVYTIAVNCCSQTGDWEFACNVYSDMTRKGVVPDEMFLSALIDVAGHAGKLDAAFEILQ 682
Query: 2167 EMVNAGVEPNVHTYGALIDGCAKAGQVAKAFGAYGIMQSKNVKPDRVVFNALITACGESG 1988
E N G++ +Y +L+ C+ A KA Y ++S ++ NALITA +
Sbjct: 683 EARNQGIQLGTVSYSSLMGACSNAKNWQKALELYEYLKSTKIEKTVSTVNALITALCDGD 742
Query: 1987 AVDRAFDVLAEMMSEIHPIDPDHITVGALMKACIRAGQIDRAREVYKMLDKYNIKGTPEV 1808
+ +A +VL+EM + P+ IT ++ A + ++ + +K + +
Sbjct: 743 QLQKAMEVLSEMKG--FGLHPNSITYSIILVASEKKDDLEAGHMLLSQAEKDGVAPNLVM 800
Query: 1807 YTIAVNSCSQKGDWEFACAV 1748
+ C ++ E AC++
Sbjct: 801 CRCIIGMCLRRS--EKACSL 818