BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00003870
         (402 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP03560.1| unnamed protein product [Coffea canephora]             97   6e-18
ref|XP_009763219.1| PREDICTED: U1 small nuclear ribonucleoprotei...    69   2e-09
ref|XP_006362977.1| PREDICTED: U1 small nuclear ribonucleoprotei...    65   3e-08
ref|XP_009604448.1| PREDICTED: U1 small nuclear ribonucleoprotei...    64   3e-08
ref|NP_001234106.1| U1 small nuclear ribonucleoprotein C-like [S...    62   1e-07
ref|XP_011082507.1| PREDICTED: U1 small nuclear ribonucleoprotei...    57   5e-06

>emb|CDP03560.1| unnamed protein product [Coffea canephora]
          Length = 269

 Score = 96.7 bits (239), Expect = 6e-18
 Identities = 45/47 (95%), Positives = 46/47 (97%)
 Frame = -2

Query: 401 VPGSAGMPASSGAPPMFTPVYQGNMAIPTTGSGESSDMNAQAAEANH 261
           VP SAGMPASSGAPPMFTPVYQGNMA+PTTGSGESSDMNAQAAEANH
Sbjct: 223 VPSSAGMPASSGAPPMFTPVYQGNMAVPTTGSGESSDMNAQAAEANH 269


>ref|XP_009763219.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Nicotiana
           sylvestris]
          Length = 196

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 30/47 (63%), Positives = 39/47 (82%), Gaps = 1/47 (2%)
 Frame = -2

Query: 401 VPGSAGMPASSGAPPMFTP-VYQGNMAIPTTGSGESSDMNAQAAEAN 264
           +PGS GMPAS+G PPMF P VYQG++A+P  G G+SS +NAQAA++N
Sbjct: 149 IPGSVGMPASTGGPPMFAPPVYQGSIAVPANGGGDSSSINAQAADSN 195


>ref|XP_006362977.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like isoform X1
           [Solanum tuberosum] gi|565394667|ref|XP_006362978.1|
           PREDICTED: U1 small nuclear ribonucleoprotein C-like
           isoform X2 [Solanum tuberosum]
          Length = 197

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 29/48 (60%), Positives = 37/48 (77%), Gaps = 2/48 (4%)
 Frame = -2

Query: 401 VPGSAGMPASSGAPPMFTP--VYQGNMAIPTTGSGESSDMNAQAAEAN 264
           VPGS GMPA +G PPMF P  VYQG+  +PT G G++S +NAQAA++N
Sbjct: 149 VPGSMGMPAPTGGPPMFAPPPVYQGSTTVPTNGGGDNSSINAQAADSN 196


>ref|XP_009604448.1| PREDICTED: U1 small nuclear ribonucleoprotein C
           {ECO:0000255|HAMAP-Rule:MF_03153}-like [Nicotiana
           tomentosiformis]
          Length = 196

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 28/47 (59%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
 Frame = -2

Query: 401 VPGSAGMPASSGAPPMFTP-VYQGNMAIPTTGSGESSDMNAQAAEAN 264
           +PGS GMPAS+G PPMF P VYQG+  +P  G G+SS +NAQA ++N
Sbjct: 149 IPGSVGMPASTGGPPMFAPPVYQGSTTVPANGGGDSSSINAQALDSN 195


>ref|NP_001234106.1| U1 small nuclear ribonucleoprotein C-like [Solanum lycopersicum]
           gi|723703518|ref|XP_010321699.1| PREDICTED: U1 small
           nuclear ribonucleoprotein C-like isoform X1 [Solanum
           lycopersicum] gi|62751087|dbj|BAD95791.1| similar to u1
           small nuclear ribonucleoprotein C [Solanum lycopersicum]
          Length = 197

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 29/48 (60%), Positives = 36/48 (75%), Gaps = 2/48 (4%)
 Frame = -2

Query: 401 VPGSAGMPASSGAPPMFTP--VYQGNMAIPTTGSGESSDMNAQAAEAN 264
           VPGS GMPA +G PPMF P  VYQG+  +PTTG  ++S  NAQAA++N
Sbjct: 149 VPGSMGMPAPTGGPPMFAPPPVYQGSTTVPTTGGVDNSSTNAQAADSN 196


>ref|XP_011082507.1| PREDICTED: U1 small nuclear ribonucleoprotein C [Sesamum indicum]
          Length = 194

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 27/47 (57%), Positives = 39/47 (82%), Gaps = 1/47 (2%)
 Frame = -2

Query: 401 VPGSAGMPASSGAPPMFTP-VYQGNMAIPTTGSGESSDMNAQAAEAN 264
           VPGSAG P ++GAPPMF P VYQG++++P++G G+ ++ +AQA EAN
Sbjct: 148 VPGSAGTP-NTGAPPMFAPPVYQGSVSLPSSGGGDGTNASAQAPEAN 193