BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00003750
         (5383 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011099129.1| PREDICTED: DNA-directed RNA polymerase II su...  2873   0.0  
ref|XP_009594602.1| PREDICTED: DNA-directed RNA polymerase II su...  2824   0.0  
ref|XP_009776334.1| PREDICTED: DNA-directed RNA polymerase II su...  2823   0.0  
ref|XP_012831470.1| PREDICTED: DNA-directed RNA polymerase II su...  2820   0.0  
ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II su...  2818   0.0  
ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II su...  2816   0.0  
ref|XP_011073958.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...  2815   0.0  
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su...  2805   0.0  
ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II su...  2800   0.0  
ref|XP_010029631.1| PREDICTED: DNA-directed RNA polymerase II su...  2779   0.0  
ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II su...  2778   0.0  
ref|XP_012491472.1| PREDICTED: DNA-directed RNA polymerase II su...  2778   0.0  
gb|KJB43259.1| hypothetical protein B456_007G190500 [Gossypium r...  2778   0.0  
ref|XP_012491467.1| PREDICTED: DNA-directed RNA polymerase II su...  2778   0.0  
ref|XP_008448514.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...  2777   0.0  
ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II su...  2775   0.0  
ref|XP_007203058.1| hypothetical protein PRUPE_ppa000093mg [Prun...  2774   0.0  
ref|XP_007046584.1| DNA-directed RNA polymerase II subunit RPB1 ...  2773   0.0  
ref|XP_008242006.1| PREDICTED: DNA-directed RNA polymerase II su...  2772   0.0  
ref|XP_004146161.2| PREDICTED: DNA-directed RNA polymerase II su...  2769   0.0  

>ref|XP_011099129.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Sesamum indicum]
          Length = 1848

 Score = 2873 bits (7448), Expect = 0.0
 Identities = 1422/1542 (92%), Positives = 1487/1542 (96%), Gaps = 1/1542 (0%)
 Frame = -1

Query: 5350 MDIRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 5171
            MD+RFPYSPAEVAK+RVVQFGILSPDEIRQMSVVHIEHSETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDLRFPYSPAEVAKIRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKPGGLSDPRLGTI 60

Query: 5170 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDPK 4991
            DRKMKCETCMANMA+CPGHFGHLELAKPMFHIGFMKTVLSI+RCVCFNCSKILADEEDPK
Sbjct: 61   DRKMKCETCMANMADCPGHFGHLELAKPMFHIGFMKTVLSILRCVCFNCSKILADEEDPK 120

Query: 4990 FKLALRIRNPKNRLKKILDACKNRSKCEGGDEIDVQGQESEEPVKKTRGGCGAQQPRLTI 4811
            FK ALRIRNPKNRLKKILDACKN+SKCEGGDEIDVQGQ+++EPVKKTRGGCGAQQP+++I
Sbjct: 121  FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDVQGQDTDEPVKKTRGGCGAQQPKISI 180

Query: 4810 DGLKMVAEYKVQKKKNDDQEQLPEPVERKQQLSAEKVLSILKRISDEDCQLLGLNPKFAR 4631
            DG+KMVAEYK+QKKKNDD EQ+PEPVERKQQLSAEKVLSILKRI+DEDCQLLGLNPK+AR
Sbjct: 181  DGMKMVAEYKIQKKKNDDPEQMPEPVERKQQLSAEKVLSILKRITDEDCQLLGLNPKYAR 240

Query: 4630 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQERNGAPAHIIS 4451
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAM+IRHNENLKRQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300

Query: 4450 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4271
            EFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 4270 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4091
            TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4090 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 3911
            DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH+IKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHKIKIMPYST 480

Query: 3910 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 3731
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 3730 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3551
            LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600

Query: 3550 LQRNAAWHQDDEPGPITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3371
            L R +AWHQ+ E G ITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LLRYSAWHQESEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 3370 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAQTMEKINDTISNAKNEVKDLIRRAQEKAL 3191
            RKFLGHTQWLVNYWLLQN FSIGIGDTIADA TMEKIN+TISNAKNEVK+LIR AQEK L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 720

Query: 3190 EAEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3011
            EAEPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3010 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDFGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2831
            ACVGQQNVEGKRIPFGFIDRTLPHFTKDD+GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 2830 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWVESQK 2651
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVW+ESQ 
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 900

Query: 2650 LESLKIKKSEFDSMYKYEIDDPNWNPDYMLPEAVEDLKTIREIRSVFEAEFQKLEADRLQ 2471
            LESLK+KK++F+ MY+YEID+ NWNP+YMLPEAVEDLKTIREIRSVF+AE QKLEADR Q
Sbjct: 901  LESLKLKKADFNDMYRYEIDNANWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRYQ 960

Query: 2470 LGTEIATIGDNTWPLPVNIRRLVSNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVH 2291
            LGTEIAT GDN+WPLPVNIRRLV NAQKTFK+DFRRPSDMHPMEIVEAVDKLQERLKVV 
Sbjct: 961  LGTEIATTGDNSWPLPVNIRRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 1020

Query: 2290 GDDYLSAEAQKNATLFFNILLRSALASKRVLNDYRLTREAFDWVIGEIESRFLQSLVAPG 2111
            GDDYLS EAQKNATLFFNILLRSALASKRVL +YRLTREAF+WVIGEIESRFLQSLVAPG
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 1080

Query: 2110 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINVAKKIKTPSLSIYLQ 1931
            EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIINVAKKIKTPSLS+YL+
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140

Query: 1930 PKASETKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIPEDVEFVKSYYEMPDEDI 1751
            P  S+TKE+AKNVQCALEYTTLRSVTQATEVWYDPDPMSTII EDVEFVKSYYEMPDE+I
Sbjct: 1141 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI 1200

Query: 1750 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDSDLTCIFNDDNADKLILRIRIM 1571
            DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFD DLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 1570 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQAKVNKFTQEEGFRT 1391
            NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK +K+NKF + EGF+ 
Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENEGFKA 1320

Query: 1390 DSNEFMLDSEGINLLAVMCHDDVDASRTTSNHLVEIIEILGIEAVRKALLDELRVVISFD 1211
            + NE+MLD+EG+NLLAVMCH+DVDA RTTSNHL+E+IE+LGIEAVRKALLDELRVVISFD
Sbjct: 1321 E-NEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFD 1379

Query: 1210 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAETD 1031
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAETD
Sbjct: 1380 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 1439

Query: 1030 YLQGVTESIMLGQLAPIGTGDCVLYLNEEMLKQAIEISLPSYME-GSLEFGMTPGRSPFG 854
            +L+GVTE+IMLGQLAPIGTGDC LYLNEEMLKQAIEI LPSYME G LEFGMTP RSP  
Sbjct: 1440 HLRGVTENIMLGQLAPIGTGDCALYLNEEMLKQAIEIPLPSYMEGGGLEFGMTPARSPLT 1499

Query: 853  GTPYHEGMMSPGYLTSPNARLSPHADAQFSPFVQSMGIAFSP 728
            GTPYH+GMMSP YL SPN RLSP  DAQFSP+V   G+AFSP
Sbjct: 1500 GTPYHDGMMSPSYLLSPNLRLSPVTDAQFSPYVG--GMAFSP 1539


>ref|XP_009594602.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nicotiana
            tomentosiformis]
          Length = 1846

 Score = 2824 bits (7321), Expect = 0.0
 Identities = 1393/1541 (90%), Positives = 1471/1541 (95%)
 Frame = -1

Query: 5350 MDIRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 5171
            MD+RFP+SPAEVAKVRVVQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDLRFPFSPAEVAKVRVVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 5170 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDPK 4991
            DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMK VLSI+RCVCFNCSKILADE+DPK
Sbjct: 61   DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120

Query: 4990 FKLALRIRNPKNRLKKILDACKNRSKCEGGDEIDVQGQESEEPVKKTRGGCGAQQPRLTI 4811
            FK A+RIRNPKNRLKK+LDACKN++KCEGGDEIDV+G+E E PVKK+RGGCGAQQP+++I
Sbjct: 121  FKQAMRIRNPKNRLKKMLDACKNKTKCEGGDEIDVRGEEPEAPVKKSRGGCGAQQPKISI 180

Query: 4810 DGLKMVAEYKVQKKKNDDQEQLPEPVERKQQLSAEKVLSILKRISDEDCQLLGLNPKFAR 4631
            DG+KMVAEYK+QKKK+DD EQ+PEPVERKQQLSAE+VLSILKR+SDEDC LLGLNP++AR
Sbjct: 181  DGMKMVAEYKLQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEYAR 240

Query: 4630 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQERNGAPAHIIS 4451
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAM+IRHNENLKRQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300

Query: 4450 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4271
            EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360

Query: 4270 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4091
            TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4090 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 3911
            DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 3910 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 3731
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540

Query: 3730 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3551
            LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600

Query: 3550 LQRNAAWHQDDEPGPITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3371
            L R +AWH D E GPITPGDTQVRIEKGELL+GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LLRYSAWHNDSEKGPITPGDTQVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 3370 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAQTMEKINDTISNAKNEVKDLIRRAQEKAL 3191
            RKFLGHTQWLVNYWLLQN FSIGIGDTIADA TMEKIN+TISNAK++VK+LI+ AQEK L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISNAKSKVKELIKAAQEKQL 720

Query: 3190 EAEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3011
            EAEPGRTMMESFEN+VNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3010 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDFGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2831
            ACVGQQNVEGKRIPFGFIDRTLPHFTKDD+GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 2830 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWVESQK 2651
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVW+E+QK
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900

Query: 2650 LESLKIKKSEFDSMYKYEIDDPNWNPDYMLPEAVEDLKTIREIRSVFEAEFQKLEADRLQ 2471
            L+SLK KK  FD MY YEIDDPNWNP YMLPEA+EDLKTIREIRSVF+AE QKL+ADR Q
Sbjct: 901  LDSLKAKKLTFDDMYAYEIDDPNWNPSYMLPEAIEDLKTIREIRSVFDAEVQKLQADRKQ 960

Query: 2470 LGTEIATIGDNTWPLPVNIRRLVSNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVH 2291
            LGTEIA  GDN+WPLPVNI+RLV NAQKTFKIDFRR SDMHPMEIVEAVDKLQERLKVV 
Sbjct: 961  LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRRSDMHPMEIVEAVDKLQERLKVVP 1020

Query: 2290 GDDYLSAEAQKNATLFFNILLRSALASKRVLNDYRLTREAFDWVIGEIESRFLQSLVAPG 2111
            GDDYLS EAQKNATLFFNILLRSALASKRVL +YRL+REAFDWVIGEIESRFLQSLVAPG
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFDWVIGEIESRFLQSLVAPG 1080

Query: 2110 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINVAKKIKTPSLSIYLQ 1931
            EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIINVAKKIKTPSLS+YL+
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140

Query: 1930 PKASETKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIPEDVEFVKSYYEMPDEDI 1751
            P+  +TKE+AK VQCALEYTTLRSVTQATEVWYDPDPMST+I EDVEFVKSYYEMPDE+I
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200

Query: 1750 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDSDLTCIFNDDNADKLILRIRIM 1571
            DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFD DLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 1570 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQAKVNKFTQEEGFRT 1391
            NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK +KV KF   EGF+ 
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319

Query: 1390 DSNEFMLDSEGINLLAVMCHDDVDASRTTSNHLVEIIEILGIEAVRKALLDELRVVISFD 1211
            ++ E+MLD+EG+NLLAVM H+DVDA RTTSNHL+E+IE+LGIEAVR++LLDELRVVISFD
Sbjct: 1320 ET-EWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1378

Query: 1210 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAETD 1031
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAV+AE+D
Sbjct: 1379 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESD 1438

Query: 1030 YLQGVTESIMLGQLAPIGTGDCVLYLNEEMLKQAIEISLPSYMEGSLEFGMTPGRSPFGG 851
            YL+GVTE+IMLGQLAPIGTG C LYLNEEMLKQAIEI LPSYMEG LEFGMTPGRSP  G
Sbjct: 1439 YLRGVTENIMLGQLAPIGTGGCALYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISG 1498

Query: 850  TPYHEGMMSPGYLTSPNARLSPHADAQFSPFVQSMGIAFSP 728
            TPYH+GMMSP YL SPN R+SP  DAQFSP+V  M  AFSP
Sbjct: 1499 TPYHDGMMSPNYLLSPNMRMSPITDAQFSPYVDKM--AFSP 1537


>ref|XP_009776334.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nicotiana
            sylvestris]
          Length = 1846

 Score = 2823 bits (7319), Expect = 0.0
 Identities = 1393/1541 (90%), Positives = 1472/1541 (95%)
 Frame = -1

Query: 5350 MDIRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 5171
            MD+RFP+SPAEVAKVRVVQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDLRFPFSPAEVAKVRVVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 5170 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDPK 4991
            DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMK VLSI+RCVCFNCSKILADE+DPK
Sbjct: 61   DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120

Query: 4990 FKLALRIRNPKNRLKKILDACKNRSKCEGGDEIDVQGQESEEPVKKTRGGCGAQQPRLTI 4811
            FK A+RIRNPKNRLKK+LDACKN++KCEGGDEIDV+G+E E PVKK+RGGCGAQQP+++I
Sbjct: 121  FKQAMRIRNPKNRLKKMLDACKNKTKCEGGDEIDVRGEEPEAPVKKSRGGCGAQQPKISI 180

Query: 4810 DGLKMVAEYKVQKKKNDDQEQLPEPVERKQQLSAEKVLSILKRISDEDCQLLGLNPKFAR 4631
            DG+KMVAEYK+QKKK+DD EQ+PEPVERKQQLSAE+VLSILKR+SDEDC LLGLNP++AR
Sbjct: 181  DGMKMVAEYKLQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEYAR 240

Query: 4630 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQERNGAPAHIIS 4451
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAM+IRHNENLKRQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300

Query: 4450 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4271
            EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360

Query: 4270 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4091
            TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4090 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 3911
            DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 3910 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 3731
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540

Query: 3730 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3551
            LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600

Query: 3550 LQRNAAWHQDDEPGPITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3371
            L R +AWH D E GPITPGDTQVRIEKGELL+GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LLRYSAWHNDSEKGPITPGDTQVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 3370 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAQTMEKINDTISNAKNEVKDLIRRAQEKAL 3191
            RKFLGHTQWLVNYWLLQN FSIGIGDTIADA TMEKIN+TISNAK++VK+LI+ AQEK L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISNAKSKVKELIKAAQEKQL 720

Query: 3190 EAEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3011
            EAEPGRTMMESFEN+VNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3010 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDFGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2831
            ACVGQQNVEGKRIPFGFIDRTLPHFTKDD+GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 2830 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWVESQK 2651
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVW+E+QK
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900

Query: 2650 LESLKIKKSEFDSMYKYEIDDPNWNPDYMLPEAVEDLKTIREIRSVFEAEFQKLEADRLQ 2471
            L+SLK KKS FD +Y YEIDDPNWNP YMLPEA+EDLKTIREIRSVF+AE QKL+ADR Q
Sbjct: 901  LDSLKAKKSTFDDLYAYEIDDPNWNPSYMLPEAIEDLKTIREIRSVFDAEVQKLQADRKQ 960

Query: 2470 LGTEIATIGDNTWPLPVNIRRLVSNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVH 2291
            LGTEIA  GDN+WPLPVNI+RLV NAQKTFKIDFRR SDMHPMEIVEAVDKLQERLKVV 
Sbjct: 961  LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRRSDMHPMEIVEAVDKLQERLKVVP 1020

Query: 2290 GDDYLSAEAQKNATLFFNILLRSALASKRVLNDYRLTREAFDWVIGEIESRFLQSLVAPG 2111
            GDDYLS EAQKNATLFFNILLRSALASKRVL +YRL+REAFDWVIGEIESRFLQSLVAPG
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFDWVIGEIESRFLQSLVAPG 1080

Query: 2110 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINVAKKIKTPSLSIYLQ 1931
            EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIINVAKKIKTPSLS+YL+
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140

Query: 1930 PKASETKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIPEDVEFVKSYYEMPDEDI 1751
            P+  +TKE+AK VQCALEYTTLRSVTQATEVWYDPDPMST+I EDVEFVKSYYEMPDE+I
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200

Query: 1750 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDSDLTCIFNDDNADKLILRIRIM 1571
            DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFD DLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 1570 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQAKVNKFTQEEGFRT 1391
            NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK +KV KF   EGF+ 
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319

Query: 1390 DSNEFMLDSEGINLLAVMCHDDVDASRTTSNHLVEIIEILGIEAVRKALLDELRVVISFD 1211
            ++ E+MLD+EG+NLLAVM H+DVDASRTTSNHL+E+IE+LGIEAVR++LLDELRVVISFD
Sbjct: 1320 ET-EWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1378

Query: 1210 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAETD 1031
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAV+AE+D
Sbjct: 1379 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESD 1438

Query: 1030 YLQGVTESIMLGQLAPIGTGDCVLYLNEEMLKQAIEISLPSYMEGSLEFGMTPGRSPFGG 851
            YL+GVTE+IMLGQLAPIGTG C LYLNEEMLKQAIEI LPSYMEG LEFGMTPGRSP  G
Sbjct: 1439 YLRGVTENIMLGQLAPIGTGGCALYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISG 1498

Query: 850  TPYHEGMMSPGYLTSPNARLSPHADAQFSPFVQSMGIAFSP 728
            TPY +GMMSP YL SPN R+SP  DAQFSP+V  M  AFSP
Sbjct: 1499 TPYPDGMMSPNYLLSPNMRMSPITDAQFSPYVDKM--AFSP 1537


>ref|XP_012831470.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Erythranthe
            guttatus] gi|604343422|gb|EYU42342.1| hypothetical
            protein MIMGU_mgv1a000091mg [Erythranthe guttata]
          Length = 1842

 Score = 2820 bits (7311), Expect = 0.0
 Identities = 1392/1542 (90%), Positives = 1473/1542 (95%), Gaps = 1/1542 (0%)
 Frame = -1

Query: 5350 MDIRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 5171
            MD+RFP+SPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI
Sbjct: 1    MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 60

Query: 5170 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDPK 4991
            DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMK VLSI+RCVCFNCSKILADEE+PK
Sbjct: 61   DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKIVLSILRCVCFNCSKILADEEEPK 120

Query: 4990 FKLALRIRNPKNRLKKILDACKNRSKCEGGDEIDVQGQESEEPVKKTRGGCGAQQPRLTI 4811
            FK A+RIRNPKNRL+KILDACKN++KC+GGDEID   Q++EEPVKK+RGGCGAQQP+++I
Sbjct: 121  FKQAMRIRNPKNRLRKILDACKNKTKCDGGDEIDGHSQDTEEPVKKSRGGCGAQQPKISI 180

Query: 4810 DGLKMVAEYKVQKKKNDDQEQLPEPVERKQQLSAEKVLSILKRISDEDCQLLGLNPKFAR 4631
            DG+KMVAEYK+QKKK+DDQ+Q+PEPVERKQQLSAEKVLSILKRI+DEDCQLLGLNPKFAR
Sbjct: 181  DGMKMVAEYKLQKKKSDDQDQMPEPVERKQQLSAEKVLSILKRITDEDCQLLGLNPKFAR 240

Query: 4630 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQERNGAPAHIIS 4451
            PDWMILQVL        PSVMMDTS+RSEDDLTHQLAM+IRHNENLKRQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300

Query: 4450 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4271
            EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 4270 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4091
            TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 420

Query: 4090 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 3911
            DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 3910 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 3731
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540

Query: 3730 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3551
            LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600

Query: 3550 LQRNAAWHQDDEPGPITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3371
            L R +AWHQ+ E G ITPGDTQVRIEKGELL+GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LLRYSAWHQETEKGFITPGDTQVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAA 660

Query: 3370 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAQTMEKINDTISNAKNEVKDLIRRAQEKAL 3191
            RKFLGHTQWLVNYWLLQN FS+GIGDTIADA TMEKIN+TISNAKNEVK+LIR AQEK L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSMGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 720

Query: 3190 EAEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3011
            E EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3010 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDFGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2831
            ACVGQQNVEGKRIPFGF+DRTLPHFTKDD+GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 2830 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWVESQK 2651
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVW+ESQ 
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 900

Query: 2650 LESLKIKKSEFDSMYKYEIDDPNWNPDYMLPEAVEDLKTIREIRSVFEAEFQKLEADRLQ 2471
            LESLK+KKS+F+ MYKYEID+ NWNP+YMLPEAVEDLKTIREIRSVF+AE  KLE DR Q
Sbjct: 901  LESLKLKKSDFNDMYKYEIDNSNWNPNYMLPEAVEDLKTIREIRSVFDAEVTKLEVDRFQ 960

Query: 2470 LGTEIATIGDNTWPLPVNIRRLVSNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVH 2291
            LGTEIAT GDN+WPLPVNI+RLV NAQKTFK+DFRRPSDMHPMEIVEAVDKLQERLKVV 
Sbjct: 961  LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 1020

Query: 2290 GDDYLSAEAQKNATLFFNILLRSALASKRVLNDYRLTREAFDWVIGEIESRFLQSLVAPG 2111
            GDDYLS EAQKNATLFFNILLRSALASKRVL +YRLTREAF+WVIGEIESRFLQSLVA G
Sbjct: 1021 GDDYLSTEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 1080

Query: 2110 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINVAKKIKTPSLSIYLQ 1931
            EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIINVAKKIKTPSLS+YL+
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140

Query: 1930 PKASETKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIPEDVEFVKSYYEMPDEDI 1751
            P  S+TKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTII EDVEFVKSYYEMPDE+I
Sbjct: 1141 PDVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI 1200

Query: 1750 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDSDLTCIFNDDNADKLILRIRIM 1571
            DPDKISPWLLRIELNREMMVDKKLSMADIAEKIN EF  DLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINTEFSDDLTCIFNDDNAEKLILRIRIM 1260

Query: 1570 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQAKVNKFTQEEGFRT 1391
            N++APKGEL DESAEDDVFLKKIE NMLTEMALRGIPDINKVFIK +K+NKF + +GF+ 
Sbjct: 1261 NEQAPKGELADESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 1320

Query: 1390 DSNEFMLDSEGINLLAVMCHDDVDASRTTSNHLVEIIEILGIEAVRKALLDELRVVISFD 1211
            + NE+MLD+EG+NLLAVMCH++VD  RTTSNHL+E+IE+LGIEAVR++LLDELRVVISFD
Sbjct: 1321 E-NEWMLDTEGVNLLAVMCHEEVDVRRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1379

Query: 1210 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAETD 1031
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAV+AETD
Sbjct: 1380 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETD 1439

Query: 1030 YLQGVTESIMLGQLAPIGTGDCVLYLNEEMLKQAIEISLPSYMEGSLEFGMTPGRSPFGG 851
             L+GVTE+IMLGQLAPIGTGDC L LNE+MLKQAIEI LPSYMEG LEFGMTPGRSP  G
Sbjct: 1440 CLRGVTENIMLGQLAPIGTGDCALLLNEQMLKQAIEIPLPSYMEGGLEFGMTPGRSPHSG 1499

Query: 850  TPYHEGMMSPGY-LTSPNARLSPHADAQFSPFVQSMGIAFSP 728
            TPYH+GMMSP Y L SPN RLSP  DAQFSP+V   G+AFSP
Sbjct: 1500 TPYHDGMMSPNYLLMSPNLRLSPVTDAQFSPYVG--GMAFSP 1539


>ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Solanum
            lycopersicum]
          Length = 1846

 Score = 2818 bits (7306), Expect = 0.0
 Identities = 1390/1541 (90%), Positives = 1469/1541 (95%)
 Frame = -1

Query: 5350 MDIRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 5171
            MD+RFP+SPAEVAKVR VQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDLRFPFSPAEVAKVRTVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 5170 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDPK 4991
            DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMK VLSI+RCVCFNCSKILADE+DPK
Sbjct: 61   DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120

Query: 4990 FKLALRIRNPKNRLKKILDACKNRSKCEGGDEIDVQGQESEEPVKKTRGGCGAQQPRLTI 4811
            FK A+RIRNPKNRL+K+LDACKN++KCEGGDEIDVQGQ++EEPVKK+RGGCGAQQP+++I
Sbjct: 121  FKQAMRIRNPKNRLRKMLDACKNKTKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKISI 180

Query: 4810 DGLKMVAEYKVQKKKNDDQEQLPEPVERKQQLSAEKVLSILKRISDEDCQLLGLNPKFAR 4631
            DG+KMVAEYK+QKKK+DD EQ+PEPVERKQQLSAE+VLSILKR+SDEDC LLGLNP+FAR
Sbjct: 181  DGMKMVAEYKMQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEFAR 240

Query: 4630 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQERNGAPAHIIS 4451
            PDWMILQ L        PSVMMDTSSRSEDDLTHQLAM+IRHNENLKRQERNGAPAHIIS
Sbjct: 241  PDWMILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300

Query: 4450 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4271
            EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360

Query: 4270 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4091
            TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4090 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 3911
            DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 3910 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 3731
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540

Query: 3730 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3551
            LLGCRK+TKRDTFIEKDVFMNILMWWEDFDGK+PAP ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQIN 600

Query: 3550 LQRNAAWHQDDEPGPITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3371
            L R +AWH D E G ITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LLRYSAWHNDSEKGYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 3370 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAQTMEKINDTISNAKNEVKDLIRRAQEKAL 3191
            RKFLGHTQWLVNYWLLQ  FSIGIGDTIADA TMEKIN+TISNAK +VK+LI+ AQEK L
Sbjct: 661  RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISNAKAKVKELIKAAQEKLL 720

Query: 3190 EAEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3011
            EAEPGRTMMESFEN+VNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3010 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDFGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2831
            ACVGQQNVEGKRIPFGFIDRTLPHFTKDD+GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 2830 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWVESQK 2651
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VW+E+QK
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIETQK 900

Query: 2650 LESLKIKKSEFDSMYKYEIDDPNWNPDYMLPEAVEDLKTIREIRSVFEAEFQKLEADRLQ 2471
            L+SLK KK  FD MY YEIDDPNWNP YMLPEAVEDLK IREIRSVF+AE QKLEADR Q
Sbjct: 901  LDSLKAKKGTFDDMYAYEIDDPNWNPSYMLPEAVEDLKGIREIRSVFDAEVQKLEADRHQ 960

Query: 2470 LGTEIATIGDNTWPLPVNIRRLVSNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVH 2291
            LGTEIA  GDN+WPLPVNI+RLV NAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVV 
Sbjct: 961  LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVP 1020

Query: 2290 GDDYLSAEAQKNATLFFNILLRSALASKRVLNDYRLTREAFDWVIGEIESRFLQSLVAPG 2111
            GDDYLS EAQKNATLFFNILLRSALASKRVL +YRL+REAF+WV+GEIESRFLQSLVAPG
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFEWVVGEIESRFLQSLVAPG 1080

Query: 2110 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINVAKKIKTPSLSIYLQ 1931
            EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIINVAKKIKTPSLS+YL+
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140

Query: 1930 PKASETKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIPEDVEFVKSYYEMPDEDI 1751
            P+  +TKE+AK VQCALEYTTLRSVTQATEVWYDPDPMST+I EDVEFVKSYYEMPDE+I
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200

Query: 1750 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDSDLTCIFNDDNADKLILRIRIM 1571
            DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFD DLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 1570 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQAKVNKFTQEEGFRT 1391
            NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK +KV KF   EGF+ 
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319

Query: 1390 DSNEFMLDSEGINLLAVMCHDDVDASRTTSNHLVEIIEILGIEAVRKALLDELRVVISFD 1211
            + NE+MLD+EG+NLLAVM H+DVDASRTTSNHL+E+IE+LGIEAVR++LLDELRVVISFD
Sbjct: 1320 E-NEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1378

Query: 1210 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAETD 1031
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAV+AE+D
Sbjct: 1379 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESD 1438

Query: 1030 YLQGVTESIMLGQLAPIGTGDCVLYLNEEMLKQAIEISLPSYMEGSLEFGMTPGRSPFGG 851
            +L+GVTE+IMLGQLAPIGTG C LYLNEEMLKQAIEI LPSYMEG LEFGMTPGRSP  G
Sbjct: 1439 HLRGVTENIMLGQLAPIGTGGCSLYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISG 1498

Query: 850  TPYHEGMMSPGYLTSPNARLSPHADAQFSPFVQSMGIAFSP 728
            TPYH+GMMSP YL SPN R+SP  DAQFSP+V   G+AFSP
Sbjct: 1499 TPYHDGMMSPNYLLSPNMRMSPITDAQFSPYVG--GMAFSP 1537


>ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Solanum
            tuberosum]
          Length = 1839

 Score = 2816 bits (7299), Expect = 0.0
 Identities = 1388/1541 (90%), Positives = 1468/1541 (95%)
 Frame = -1

Query: 5350 MDIRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 5171
            MD+RFP+SPAEVAKVR VQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDLRFPFSPAEVAKVRTVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 5170 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDPK 4991
            DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMK VLSI+RCVCFNCSKILADE+DPK
Sbjct: 61   DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120

Query: 4990 FKLALRIRNPKNRLKKILDACKNRSKCEGGDEIDVQGQESEEPVKKTRGGCGAQQPRLTI 4811
            FK A+RIRNPKNRL+K+LDACKN++KCEGGDEIDVQG ++EEPVKK+RGGCGAQQP+++I
Sbjct: 121  FKQAMRIRNPKNRLRKMLDACKNKTKCEGGDEIDVQGHDTEEPVKKSRGGCGAQQPKISI 180

Query: 4810 DGLKMVAEYKVQKKKNDDQEQLPEPVERKQQLSAEKVLSILKRISDEDCQLLGLNPKFAR 4631
            DG+KMVAEYK+QKKK+DD EQ+PEPVERKQQLSAE+VLSILKR+SDEDC LLGLNP+FAR
Sbjct: 181  DGMKMVAEYKMQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEFAR 240

Query: 4630 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQERNGAPAHIIS 4451
            PDWMILQ L        PSVMMDTSSRSEDDLTHQLAM+IRHNENLKRQERNGAPAHIIS
Sbjct: 241  PDWMILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300

Query: 4450 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4271
            EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360

Query: 4270 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4091
            TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4090 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 3911
            DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 3910 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 3731
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540

Query: 3730 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3551
            LLGCRK+TKRDTFIEKDVFMNILMWWEDFDGK+PAP ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQIN 600

Query: 3550 LQRNAAWHQDDEPGPITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3371
            L R +AWH D E G ITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LLRYSAWHNDSEKGYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 3370 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAQTMEKINDTISNAKNEVKDLIRRAQEKAL 3191
            RKFLGHTQWLVNYWLLQ  FSIGIGDTIADA TMEKIN+TISNAK +VK+LI+ AQEK L
Sbjct: 661  RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISNAKAKVKELIKAAQEKLL 720

Query: 3190 EAEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3011
            EAEPGRTMMESFEN+VNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3010 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDFGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2831
            ACVGQQNVEGKRIPFGFIDRTLPHFTKDD+GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 2830 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWVESQK 2651
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VW+E+QK
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIETQK 900

Query: 2650 LESLKIKKSEFDSMYKYEIDDPNWNPDYMLPEAVEDLKTIREIRSVFEAEFQKLEADRLQ 2471
            L+SLK KK  FD MY YEIDDPNWNP YMLPEAVEDLK IREIRSVF+AE QKLEADR Q
Sbjct: 901  LDSLKAKKGTFDDMYAYEIDDPNWNPSYMLPEAVEDLKGIREIRSVFDAEVQKLEADRHQ 960

Query: 2470 LGTEIATIGDNTWPLPVNIRRLVSNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVH 2291
            LGTEIA  GDN+WPLPVNI+RLV NAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVV 
Sbjct: 961  LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVP 1020

Query: 2290 GDDYLSAEAQKNATLFFNILLRSALASKRVLNDYRLTREAFDWVIGEIESRFLQSLVAPG 2111
            GDDYLS EAQKNATLFFNILLRSALASKRVL +YRL+REAF+WV+GEIESRFLQSLVAPG
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFEWVVGEIESRFLQSLVAPG 1080

Query: 2110 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINVAKKIKTPSLSIYLQ 1931
            EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIINVAKKIKTPSLS+YL+
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140

Query: 1930 PKASETKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIPEDVEFVKSYYEMPDEDI 1751
            P+  +TKE+AK VQCALEYTTLRSVTQATEVWYDPDPMST+I EDVEFVKSYYEMPDE+I
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200

Query: 1750 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDSDLTCIFNDDNADKLILRIRIM 1571
            DPDKISPWLLRIELNREMMVDKKLSMADIAEKIN+EFD DLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINVEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 1570 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQAKVNKFTQEEGFRT 1391
            NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK +KV KF   EGF+ 
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319

Query: 1390 DSNEFMLDSEGINLLAVMCHDDVDASRTTSNHLVEIIEILGIEAVRKALLDELRVVISFD 1211
            + NE+MLD+EG+NLLAVM H+DVDASRTTSNHL+E+IE+LGIEAVR++LLDELRVVISFD
Sbjct: 1320 E-NEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1378

Query: 1210 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAETD 1031
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAV+AE+D
Sbjct: 1379 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESD 1438

Query: 1030 YLQGVTESIMLGQLAPIGTGDCVLYLNEEMLKQAIEISLPSYMEGSLEFGMTPGRSPFGG 851
            +L+GVTE+IMLGQLAPIGTG C LYLNEEMLKQAIEI LPSYMEG LEFGMTPGRSP  G
Sbjct: 1439 HLRGVTENIMLGQLAPIGTGSCSLYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISG 1498

Query: 850  TPYHEGMMSPGYLTSPNARLSPHADAQFSPFVQSMGIAFSP 728
            TPYH+GMMSP YL SPN R+SP  DAQFSP+V   G+AFSP
Sbjct: 1499 TPYHDGMMSPNYLLSPNMRMSPITDAQFSPYVG--GMAFSP 1537


>ref|XP_011073958.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
            subunit 1-like [Sesamum indicum]
          Length = 1843

 Score = 2815 bits (7298), Expect = 0.0
 Identities = 1392/1545 (90%), Positives = 1470/1545 (95%), Gaps = 4/1545 (0%)
 Frame = -1

Query: 5350 MDIRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIG----GLSDPR 5183
            MD+RFP+SPAEVAKVRVVQFGI+SPDEIRQMSVVHIEH ET ERGKPKIG    GLSD R
Sbjct: 1    MDLRFPFSPAEVAKVRVVQFGIISPDEIRQMSVVHIEHGETMERGKPKIGMXICGLSDLR 60

Query: 5182 LGTIDRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADE 5003
            LGTI +KMKCETCM+NMAECPGHFGHLELAKPMFHIGFMK VLSI+R VCFNCSKILADE
Sbjct: 61   LGTIGKKMKCETCMSNMAECPGHFGHLELAKPMFHIGFMKVVLSILRSVCFNCSKILADE 120

Query: 5002 EDPKFKLALRIRNPKNRLKKILDACKNRSKCEGGDEIDVQGQESEEPVKKTRGGCGAQQP 4823
            +DPKFK A+RIRNPKNRL+KILDACKN+SKC+GGDEIDV+GQE +EPVKK+RGGCGAQQP
Sbjct: 121  DDPKFKQAMRIRNPKNRLRKILDACKNKSKCDGGDEIDVRGQEPDEPVKKSRGGCGAQQP 180

Query: 4822 RLTIDGLKMVAEYKVQKKKNDDQEQLPEPVERKQQLSAEKVLSILKRISDEDCQLLGLNP 4643
            +++IDG+KMVAEYK+QKKKNDDQ+Q+PEPVERKQ LSAEKVLSILKRI+DEDCQLLGLNP
Sbjct: 181  KISIDGMKMVAEYKIQKKKNDDQDQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNP 240

Query: 4642 KFARPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQERNGAPA 4463
            K+ARPDWMILQVL        PSVMMDTSSRSEDDLTHQLAM+IRHNENLK QERNGAPA
Sbjct: 241  KYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKLQERNGAPA 300

Query: 4462 HIISEFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVD 4283
            HIISEFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVD
Sbjct: 301  HIISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVD 360

Query: 4282 FSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAK 4103
            FSARTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE+GPHPPPGKTGAK
Sbjct: 361  FSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEHGPHPPPGKTGAK 420

Query: 4102 YIIRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIM 3923
            YIIRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIM
Sbjct: 421  YIIRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIM 480

Query: 3922 PYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGI 3743
            PYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEV+ELM+VPKCIVSPQSNRPVMGI
Sbjct: 481  PYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVMELMLVPKCIVSPQSNRPVMGI 540

Query: 3742 VQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIP 3563
            VQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAP ILKPRPLWTGKQVFNLIIP
Sbjct: 541  VQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIP 600

Query: 3562 KQINLQRNAAWHQDDEPGPITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVG 3383
            KQINL R +AWHQ+ E G ITPGDTQVRIEKG+LLSGTLCKK LGTSTGSLIHVIWEEVG
Sbjct: 601  KQINLLRYSAWHQETEKGYITPGDTQVRIEKGDLLSGTLCKKALGTSTGSLIHVIWEEVG 660

Query: 3382 PDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAQTMEKINDTISNAKNEVKDLIRRAQ 3203
            PDAARKFLGHTQWLVNYWLLQN FS+GIGDTIADA TMEKIN+TISNAKN+VK+LIR AQ
Sbjct: 661  PDAARKFLGHTQWLVNYWLLQNAFSMGIGDTIADAATMEKINETISNAKNQVKELIRAAQ 720

Query: 3202 EKALEAEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINI 3023
            EK LEAEPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINI
Sbjct: 721  EKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINI 780

Query: 3022 SQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDFGPESRGFVENSYLRGLTPQEFFFHAM 2843
            SQMTACVGQQNVEGKRIPFGF+DRTLPHFTKDDFGPESRGFVENSYLRGLTPQEFFFHAM
Sbjct: 781  SQMTACVGQQNVEGKRIPFGFVDRTLPHFTKDDFGPESRGFVENSYLRGLTPQEFFFHAM 840

Query: 2842 GGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWV 2663
            GGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVW+
Sbjct: 841  GGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWI 900

Query: 2662 ESQKLESLKIKKSEFDSMYKYEIDDPNWNPDYMLPEAVEDLKTIREIRSVFEAEFQKLEA 2483
            ESQ LESLK+KKS+F+ MYKYEID  NWNP YMLPEAVEDLKTIREIRSVF+AE QKLEA
Sbjct: 901  ESQPLESLKLKKSDFNDMYKYEIDSTNWNPSYMLPEAVEDLKTIREIRSVFDAEVQKLEA 960

Query: 2482 DRLQLGTEIATIGDNTWPLPVNIRRLVSNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERL 2303
            DR QLGTEIAT GDN+WPLPVNI+RLV NAQKTFK+DFRRPSDMHPMEIVEAVDKLQERL
Sbjct: 961  DRYQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERL 1020

Query: 2302 KVVHGDDYLSAEAQKNATLFFNILLRSALASKRVLNDYRLTREAFDWVIGEIESRFLQSL 2123
            KVV GDDYLS EAQKNATLFFNILLRSALASKRVL +YRLTREAFDWVIGEIESRFLQSL
Sbjct: 1021 KVVVGDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVIGEIESRFLQSL 1080

Query: 2122 VAPGEMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINVAKKIKTPSLS 1943
            VA GEMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIINVAKKIKTPSLS
Sbjct: 1081 VAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLS 1140

Query: 1942 IYLQPKASETKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIPEDVEFVKSYYEMP 1763
            +YL+P  S+TKE+AKNVQCALEYTTLRSVTQATEVWYDPDPMSTII EDVEFVKSYYEMP
Sbjct: 1141 VYLRPDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMP 1200

Query: 1762 DEDIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDSDLTCIFNDDNADKLILR 1583
            DE+IDP KISPWLLR+ELNREMMVDKKLSMADIAEKINLEF+ DLTCIFNDDNA+KLILR
Sbjct: 1201 DEEIDPHKISPWLLRVELNREMMVDKKLSMADIAEKINLEFEDDLTCIFNDDNAEKLILR 1260

Query: 1582 IRIMNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQAKVNKFTQEE 1403
            IRIMNDEAPKGEL DESAEDDVFLKK+ESNMLTEMALRGIPDINKVFIK  KVNKF + E
Sbjct: 1261 IRIMNDEAPKGELQDESAEDDVFLKKVESNMLTEMALRGIPDINKVFIKNGKVNKFDENE 1320

Query: 1402 GFRTDSNEFMLDSEGINLLAVMCHDDVDASRTTSNHLVEIIEILGIEAVRKALLDELRVV 1223
            GF+ + NE+MLD+EG+NLLAV CH+DVD+ RTTSNHL+E+IE+LGIEAVRKALLDELRVV
Sbjct: 1321 GFKAE-NEWMLDTEGVNLLAVACHEDVDSRRTTSNHLIEVIEVLGIEAVRKALLDELRVV 1379

Query: 1222 ISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVY 1043
            ISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAV+
Sbjct: 1380 ISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVF 1439

Query: 1042 AETDYLQGVTESIMLGQLAPIGTGDCVLYLNEEMLKQAIEISLPSYMEGSLEFGMTPGRS 863
            AE D L+GVTE+IMLGQLAPIGTGDC L LNEEMLKQAIEI LPSYMEG LEFGMTPGRS
Sbjct: 1440 AEMDCLRGVTENIMLGQLAPIGTGDCGLLLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRS 1499

Query: 862  PFGGTPYHEGMMSPGYLTSPNARLSPHADAQFSPFVQSMGIAFSP 728
            P  GTPYH+GMMSP YL SPN RLSP +DAQFSP+V   G+AFSP
Sbjct: 1500 PVTGTPYHDGMMSPSYLLSPNLRLSPVSDAQFSPYVG--GMAFSP 1542


>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Vitis vinifera]
          Length = 1848

 Score = 2805 bits (7271), Expect = 0.0
 Identities = 1382/1541 (89%), Positives = 1465/1541 (95%)
 Frame = -1

Query: 5350 MDIRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 5171
            MD+RFPYSPAEVAKVR+VQFGILSPDEIRQMSVV IEHSETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 60

Query: 5170 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDPK 4991
            DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEED K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120

Query: 4990 FKLALRIRNPKNRLKKILDACKNRSKCEGGDEIDVQGQESEEPVKKTRGGCGAQQPRLTI 4811
            FK A +IRNPKNRLKKILDACKN+SKCEGGDEI+ Q  +S+EPVKK+RGGCGAQQP+LTI
Sbjct: 121  FKQAQKIRNPKNRLKKILDACKNKSKCEGGDEIETQALDSDEPVKKSRGGCGAQQPKLTI 180

Query: 4810 DGLKMVAEYKVQKKKNDDQEQLPEPVERKQQLSAEKVLSILKRISDEDCQLLGLNPKFAR 4631
            +G+KM+AEYK+Q+KKNDD EQLPEPVERKQQLSAE+VL++LKRISDEDC LLGLNPK+AR
Sbjct: 181  EGMKMIAEYKIQRKKNDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCILLGLNPKYAR 240

Query: 4630 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQERNGAPAHIIS 4451
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAM+IRHNENL+RQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 4450 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4271
            EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 4270 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4091
            TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4090 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 3911
            +DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 3910 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 3731
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 3730 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3551
            LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 600

Query: 3550 LQRNAAWHQDDEPGPITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3371
            L R +AWH + E G ITPGDTQVRIEKGELL+GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LLRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 3370 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAQTMEKINDTISNAKNEVKDLIRRAQEKAL 3191
            RKFLGHTQWLVNYWLLQNGFSIGIGDTIADA TMEKIN+TIS AKNEVK+LIR AQE+ L
Sbjct: 661  RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQL 720

Query: 3190 EAEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3011
            EAEPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3010 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDFGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2831
            ACVGQQNVEGKRIP+GFIDRTLPHFTKDD+GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 2830 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWVESQK 2651
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVW+E+QK
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900

Query: 2650 LESLKIKKSEFDSMYKYEIDDPNWNPDYMLPEAVEDLKTIREIRSVFEAEFQKLEADRLQ 2471
            L+SLK+KK EFD ++KYEIDD NWNP YMLPE VEDLKTIRE R+VF+AE QKLEADR Q
Sbjct: 901  LDSLKMKKGEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRFQ 960

Query: 2470 LGTEIATIGDNTWPLPVNIRRLVSNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVH 2291
            LGTEIAT GDN+WP+PVN++RL+ NAQKTFK+D RRPSDMHPMEIVEAVDKLQERLKVV 
Sbjct: 961  LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 1020

Query: 2290 GDDYLSAEAQKNATLFFNILLRSALASKRVLNDYRLTREAFDWVIGEIESRFLQSLVAPG 2111
            GDD +S EAQKNATLFFNILLRS  ASKRVL +YRLTREAF+WVIGEIESRFLQSLVAPG
Sbjct: 1021 GDDLISMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 1080

Query: 2110 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINVAKKIKTPSLSIYLQ 1931
            EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIINVAKKIKTPSLS+YL+
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140

Query: 1930 PKASETKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIPEDVEFVKSYYEMPDEDI 1751
            P  S+TKE+AKNVQCALEYTTLRSVTQATEVWYDPDPMSTII EDV+FVKSYYEMPDE++
Sbjct: 1141 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEV 1200

Query: 1750 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDSDLTCIFNDDNADKLILRIRIM 1571
             P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFD DLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 1570 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQAKVNKFTQEEGFRT 1391
            NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK  KVNKF + EGF+ 
Sbjct: 1261 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDESEGFKP 1320

Query: 1390 DSNEFMLDSEGINLLAVMCHDDVDASRTTSNHLVEIIEILGIEAVRKALLDELRVVISFD 1211
            +  E+MLD+EG+NLLAVMCH+DVDA RTTSNHL+E+IE+LGIEAVR++LLDELRVVISFD
Sbjct: 1321 EV-EWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1379

Query: 1210 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAETD 1031
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAETD
Sbjct: 1380 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 1439

Query: 1030 YLQGVTESIMLGQLAPIGTGDCVLYLNEEMLKQAIEISLPSYMEGSLEFGMTPGRSPFGG 851
            +L+GVTE+IMLGQLAPIGTGDC LYLN++ML+ AIE+ LPSYMEG L+FGMTP RSP  G
Sbjct: 1440 FLRGVTENIMLGQLAPIGTGDCALYLNDQMLQHAIELQLPSYMEG-LDFGMTPSRSPITG 1498

Query: 850  TPYHEGMMSPGYLTSPNARLSPHADAQFSPFVQSMGIAFSP 728
            TPYH+GMMSP YL SPN RLSP  DAQFSP+V   G+AFSP
Sbjct: 1499 TPYHDGMMSPNYLLSPNLRLSPITDAQFSPYVG--GMAFSP 1537


>ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nelumbo
            nucifera]
          Length = 1848

 Score = 2800 bits (7259), Expect = 0.0
 Identities = 1381/1541 (89%), Positives = 1466/1541 (95%)
 Frame = -1

Query: 5350 MDIRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 5171
            MD RFPYSPAEV+KVR VQFGILSPD IRQMSVV IEHSETTE+GKPK GGLSD RLGTI
Sbjct: 1    MDTRFPYSPAEVSKVRRVQFGILSPDVIRQMSVVQIEHSETTEKGKPKPGGLSDTRLGTI 60

Query: 5170 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDPK 4991
            DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEED K
Sbjct: 61   DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120

Query: 4990 FKLALRIRNPKNRLKKILDACKNRSKCEGGDEIDVQGQESEEPVKKTRGGCGAQQPRLTI 4811
            FK A RIRNPKNRLKK+LDACKN++KCEGGDEI+VQGQ++ EP+KK RGGCGAQQP+LTI
Sbjct: 121  FKQAQRIRNPKNRLKKVLDACKNKTKCEGGDEIEVQGQDTGEPIKKRRGGCGAQQPKLTI 180

Query: 4810 DGLKMVAEYKVQKKKNDDQEQLPEPVERKQQLSAEKVLSILKRISDEDCQLLGLNPKFAR 4631
            +G+KM+AEYK Q+KKNDDQEQLPEPVERKQQLSAE+VLS+LKRISDEDC LLGLNP++AR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCILLGLNPEYAR 240

Query: 4630 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQERNGAPAHIIS 4451
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAM+IRHNENL+RQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 4450 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4271
            EFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 4270 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4091
            TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4090 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 3911
            +DGQRLDLRYLKKSSD HLELGYKVERHL DGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  EDGQRLDLRYLKKSSDHHLELGYKVERHLQDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 3910 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 3731
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 3730 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3551
            LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 600

Query: 3550 LQRNAAWHQDDEPGPITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3371
            L R +AWH + E G ITPGDTQVRIE+GELL+GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LMRTSAWHSESETGFITPGDTQVRIERGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 3370 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAQTMEKINDTISNAKNEVKDLIRRAQEKAL 3191
            RKFLGHTQWLVNYWLLQNGFSIGIGDTIADA TMEKIN+TIS AKNEVK+LIR AQE+ L
Sbjct: 661  RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQL 720

Query: 3190 EAEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3011
            EAEPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3010 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDFGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2831
            ACVGQQNVEGKRIP+GFIDRTLPHFTKDD+GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 2830 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWVESQK 2651
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVW+E+QK
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900

Query: 2650 LESLKIKKSEFDSMYKYEIDDPNWNPDYMLPEAVEDLKTIREIRSVFEAEFQKLEADRLQ 2471
            L+SLK++KSEFD +++YEIDD NWNP YMLPE VEDLKTIRE R+VF+AE QKLEADR Q
Sbjct: 901  LDSLKMRKSEFDKVFRYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQ 960

Query: 2470 LGTEIATIGDNTWPLPVNIRRLVSNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVH 2291
            LGTEIAT GDN WP+PVN++RL+ NAQKTFK+D RRPSDMHPMEIVEAVDKLQERLKVV 
Sbjct: 961  LGTEIATTGDNNWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 1020

Query: 2290 GDDYLSAEAQKNATLFFNILLRSALASKRVLNDYRLTREAFDWVIGEIESRFLQSLVAPG 2111
            GDD+LS EAQKNATLFFNILLRS  ASKRVL +YRLTREAF+WVIGEIESRFLQSLVAPG
Sbjct: 1021 GDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 1080

Query: 2110 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINVAKKIKTPSLSIYLQ 1931
            EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIINVAKKIKTPSLS+YL+
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140

Query: 1930 PKASETKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIPEDVEFVKSYYEMPDEDI 1751
            P+ ++TKE+AKNVQCALEYTTLRSVTQATEVWYDPDPMSTII EDV+FVKSYYEMPDE++
Sbjct: 1141 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEV 1200

Query: 1750 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDSDLTCIFNDDNADKLILRIRIM 1571
             P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFD DLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 1570 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQAKVNKFTQEEGFRT 1391
            NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK  KVNKF + EGF+ 
Sbjct: 1261 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDESEGFKP 1320

Query: 1390 DSNEFMLDSEGINLLAVMCHDDVDASRTTSNHLVEIIEILGIEAVRKALLDELRVVISFD 1211
            +  E+MLD+EG+NLLAVMCH+DVDA+RTTSNHL+E+IE+LGIEAVR+ALLDELRVVISFD
Sbjct: 1321 EV-EWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 1379

Query: 1210 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAETD 1031
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAETD
Sbjct: 1380 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 1439

Query: 1030 YLQGVTESIMLGQLAPIGTGDCVLYLNEEMLKQAIEISLPSYMEGSLEFGMTPGRSPFGG 851
             L+GVTE+IMLGQLAPIGTGDC LYLN++ML+QAIE+ LPSYMEG L+FGMTP RSP  G
Sbjct: 1440 CLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYMEG-LDFGMTPSRSPIMG 1498

Query: 850  TPYHEGMMSPGYLTSPNARLSPHADAQFSPFVQSMGIAFSP 728
            TPY+EGMMSP YL SPNARLSP  DAQFSP+V   G+AFSP
Sbjct: 1499 TPYNEGMMSPSYLLSPNARLSPITDAQFSPYVG--GMAFSP 1537


>ref|XP_010029631.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Eucalyptus
            grandis] gi|629090320|gb|KCW56573.1| hypothetical protein
            EUGRSUZ_I02304 [Eucalyptus grandis]
          Length = 1852

 Score = 2779 bits (7204), Expect = 0.0
 Identities = 1368/1541 (88%), Positives = 1454/1541 (94%)
 Frame = -1

Query: 5350 MDIRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 5171
            MDIRFP+SPAEVAKVR+VQFGILSPDEIRQMSVV IEH ETTERGKPKI GLSDPRLGTI
Sbjct: 1    MDIRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 60

Query: 5170 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDPK 4991
            DRK+KCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLSIMRCVCFNCSKIL DE+D K
Sbjct: 61   DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILTDEDDHK 120

Query: 4990 FKLALRIRNPKNRLKKILDACKNRSKCEGGDEIDVQGQESEEPVKKTRGGCGAQQPRLTI 4811
            FK ALRIRNPKNRLKKILDACKN+SKC+GGD++D +GQ SEEP KK  GGCGAQQP+LTI
Sbjct: 121  FKQALRIRNPKNRLKKILDACKNKSKCDGGDDVDTKGQGSEEPKKKNHGGCGAQQPKLTI 180

Query: 4810 DGLKMVAEYKVQKKKNDDQEQLPEPVERKQQLSAEKVLSILKRISDEDCQLLGLNPKFAR 4631
            +G+KM+AEYK Q+KKNDDQ+Q+PEPVERKQ LSAE+VLS+LKRISDE CQLLGLNPK+AR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQDQIPEPVERKQTLSAERVLSVLKRISDEHCQLLGLNPKYAR 240

Query: 4630 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQERNGAPAHIIS 4451
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAM+IRHNENL++QERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRQQERNGAPAHIIS 300

Query: 4450 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4271
            EFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 4270 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4091
            TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4090 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 3911
            DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 3910 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 3731
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 3730 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3551
            LLGCRKITKRDTFIEKDVFMN+LMWWEDFDGK+P PAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNVLMWWEDFDGKVPTPAILKPRPLWTGKQVFNLIIPKQIN 600

Query: 3550 LQRNAAWHQDDEPGPITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3371
            L RN+AWH + E G ITPGDTQVRIEKGELLSGTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LLRNSAWHSETETGFITPGDTQVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660

Query: 3370 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAQTMEKINDTISNAKNEVKDLIRRAQEKAL 3191
            RKFLGHTQWLVNYWLLQNGFSIGIGDTIADA TMEKIN+TIS+AK+EVK LI+ AQEK L
Sbjct: 661  RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISSAKDEVKRLIKDAQEKKL 720

Query: 3190 EAEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3011
            E EPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3010 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDFGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2831
            ACVGQQNVEGKRIPFGFI RTLPHFTKDD+GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 2830 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWVESQK 2651
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VW+ESQK
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 900

Query: 2650 LESLKIKKSEFDSMYKYEIDDPNWNPDYMLPEAVEDLKTIREIRSVFEAEFQKLEADRLQ 2471
            L+SLK+KK+EFD +++YEIDD NWNPDYMLPE  EDL++I E+R VF+AE QKLEADR Q
Sbjct: 901  LDSLKMKKTEFDRVFRYEIDDENWNPDYMLPENAEDLRSIGELRDVFDAEVQKLEADRYQ 960

Query: 2470 LGTEIATIGDNTWPLPVNIRRLVSNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVH 2291
            LGTEIAT GDNTWPLPVN++RL+ NAQKTFKID RRPSD+HP+E+VEA+DKLQERLKVV 
Sbjct: 961  LGTEIATTGDNTWPLPVNLKRLIWNAQKTFKIDLRRPSDIHPVEVVEAIDKLQERLKVVP 1020

Query: 2290 GDDYLSAEAQKNATLFFNILLRSALASKRVLNDYRLTREAFDWVIGEIESRFLQSLVAPG 2111
            G+D LS EAQKNATLFFNILLRS  ASKRVL +YRLTREAFDWVIGEIESRFLQSLVAPG
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAPG 1080

Query: 2110 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINVAKKIKTPSLSIYLQ 1931
            EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIINVAKKIKTPSLS+YL+
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140

Query: 1930 PKASETKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIPEDVEFVKSYYEMPDEDI 1751
            P+ S+TKE AK VQCALEYTTLRSVTQATEVWYDPDP ST I ED++FVKSY EMPDE+I
Sbjct: 1141 PEVSKTKENAKTVQCALEYTTLRSVTQATEVWYDPDPTSTRIEEDIDFVKSYIEMPDEEI 1200

Query: 1750 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDSDLTCIFNDDNADKLILRIRIM 1571
             P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFD DL CIFNDDNADKLILRIRIM
Sbjct: 1201 SPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLNCIFNDDNADKLILRIRIM 1260

Query: 1570 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQAKVNKFTQEEGFRT 1391
            NDE PKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK  KVNKF + +GF+ 
Sbjct: 1261 NDEVPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNGKVNKFNENDGFKP 1320

Query: 1390 DSNEFMLDSEGINLLAVMCHDDVDASRTTSNHLVEIIEILGIEAVRKALLDELRVVISFD 1211
            ++ E+MLD+EG+NLLAVMCH+ VDA+RTTSNHL+EIIE+LGIEAVR++LLDELRVVISFD
Sbjct: 1321 ET-EWMLDTEGVNLLAVMCHEGVDATRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFD 1379

Query: 1210 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAETD 1031
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAE+D
Sbjct: 1380 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAESD 1439

Query: 1030 YLQGVTESIMLGQLAPIGTGDCVLYLNEEMLKQAIEISLPSYMEGSLEFGMTPGRSPFGG 851
            YL+GVTE+IMLGQLAPIGTGDC LYLN+EMLK AIE+ LPSYM+G L+FGMTP RSP  G
Sbjct: 1440 YLRGVTENIMLGQLAPIGTGDCALYLNDEMLKHAIELQLPSYMDG-LDFGMTPARSPISG 1498

Query: 850  TPYHEGMMSPGYLTSPNARLSPHADAQFSPFVQSMGIAFSP 728
            TPYHEGMMSP YL SPN RLSP  DAQFSP+V   G+AFSP
Sbjct: 1499 TPYHEGMMSPSYLLSPNLRLSPTTDAQFSPYVG--GMAFSP 1537


>ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Phoenix
            dactylifera]
          Length = 1842

 Score = 2778 bits (7202), Expect = 0.0
 Identities = 1374/1542 (89%), Positives = 1454/1542 (94%), Gaps = 1/1542 (0%)
 Frame = -1

Query: 5350 MDIRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 5171
            MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSVV IEH ET ERGKPK GGLSDPRLGTI
Sbjct: 1    MDMRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 60

Query: 5170 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDPK 4991
            DRKMKCETCMANMAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADE+D +
Sbjct: 61   DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDTR 120

Query: 4990 FKLALRIRNPKNRLKKILDACKNRSKCEGGDEIDVQGQE-SEEPVKKTRGGCGAQQPRLT 4814
            FK AL+IRNPK+RLK+I DACK + KC GGD+IDVQ Q+ SEEP+KK+RGGCGAQQP +T
Sbjct: 121  FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKSRGGCGAQQPNIT 180

Query: 4813 IDGLKMVAEYKVQKKKNDDQEQLPEPVERKQQLSAEKVLSILKRISDEDCQLLGLNPKFA 4634
            IDG+KM+AEYK  KKK+DDQEQLPEPVERKQ LSAE+VLS+LKRISDEDC LLGL+PK+A
Sbjct: 181  IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLDPKYA 240

Query: 4633 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQERNGAPAHII 4454
            RPDWMILQVL        PSVMMDTSSRSEDDLTHQLAM+IRHNENL+RQERNGAPAHII
Sbjct: 241  RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300

Query: 4453 SEFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 4274
            +EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301  TEFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360

Query: 4273 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 4094
            RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361  RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420

Query: 4093 RDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 3914
            R+DGQRLDLRYLKKSSD HLELGYKVERHL DGD+VLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421  REDGQRLDLRYLKKSSDHHLELGYKVERHLMDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 480

Query: 3913 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 3734
            TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481  TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540

Query: 3733 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 3554
            TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541  TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600

Query: 3553 NLQRNAAWHQDDEPGPITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 3374
            NL R +AWH + E G ITPGDT VRIEKGELLSGTLCK+TLGTSTGSLIHVIWEEVGPDA
Sbjct: 601  NLIRTSAWHSEAETGFITPGDTLVRIEKGELLSGTLCKRTLGTSTGSLIHVIWEEVGPDA 660

Query: 3373 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAQTMEKINDTISNAKNEVKDLIRRAQEKA 3194
            ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADA TMEKIN+TIS AKN+VK+LI+ AQEK 
Sbjct: 661  ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 720

Query: 3193 LEAEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 3014
            LEAEPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721  LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780

Query: 3013 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDFGPESRGFVENSYLRGLTPQEFFFHAMGGR 2834
            TACVGQQNVEGKRIP+GFIDRTLPHFTKDD+GPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781  TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840

Query: 2833 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWVESQ 2654
            EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVW+ESQ
Sbjct: 841  EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900

Query: 2653 KLESLKIKKSEFDSMYKYEIDDPNWNPDYMLPEAVEDLKTIREIRSVFEAEFQKLEADRL 2474
            KL+SLK+KKSEFD  +KYEIDD NWNP YMLPE VEDLKTIRE R+VF+AE QKLEADR 
Sbjct: 901  KLDSLKMKKSEFDKGFKYEIDDDNWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 960

Query: 2473 QLGTEIATIGDNTWPLPVNIRRLVSNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVV 2294
            QLGTEIAT GDNTWPLPVN++RL+ NAQKTFKID RRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 961  QLGTEIATTGDNTWPLPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1020

Query: 2293 HGDDYLSAEAQKNATLFFNILLRSALASKRVLNDYRLTREAFDWVIGEIESRFLQSLVAP 2114
             GDD+LS EAQKNATLFFNILLRS  ASKRVL +YRLTREAF+WVIGEIESRFLQSLVAP
Sbjct: 1021 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080

Query: 2113 GEMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINVAKKIKTPSLSIYL 1934
            GEMIGC+AAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIINVAKKIKTPSLS+YL
Sbjct: 1081 GEMIGCIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140

Query: 1933 QPKASETKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIPEDVEFVKSYYEMPDED 1754
            +P+ ++ KE AKNVQCALEYTTLRSVT ATE+WYDPDPMSTII EDVEFVKSYYEMPDED
Sbjct: 1141 KPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1200

Query: 1753 IDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDSDLTCIFNDDNADKLILRIRI 1574
            I P+KISPWLLRIELNREMMVDKKLSMADIAEKIN EF  DLTCIFNDDNADKLILRIRI
Sbjct: 1201 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFADDLTCIFNDDNADKLILRIRI 1260

Query: 1573 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQAKVNKFTQEEGFR 1394
            MNDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK  KVN+F   EGF+
Sbjct: 1261 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDDNEGFK 1320

Query: 1393 TDSNEFMLDSEGINLLAVMCHDDVDASRTTSNHLVEIIEILGIEAVRKALLDELRVVISF 1214
             D  E+MLD+EG+NLLAVMCH+DVDA+RTTSNHL+E+IE+LGIEAVR++LLDELRVVISF
Sbjct: 1321 ADV-EWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISF 1379

Query: 1213 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAET 1034
            DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAET
Sbjct: 1380 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET 1439

Query: 1033 DYLQGVTESIMLGQLAPIGTGDCVLYLNEEMLKQAIEISLPSYMEGSLEFGMTPGRSPFG 854
            DYL+GVTE+IMLGQLAPIGTGDC LYLN++ML+QAIE+ LPSYMEG L+FGMTP RSP  
Sbjct: 1440 DYLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYMEG-LDFGMTPSRSPIS 1498

Query: 853  GTPYHEGMMSPGYLTSPNARLSPHADAQFSPFVQSMGIAFSP 728
            GTPYHEGMMSP YL SPN R SP  DAQFSP+V   G+AFSP
Sbjct: 1499 GTPYHEGMMSPSYLLSPNVRSSPITDAQFSPYVG--GMAFSP 1538


>ref|XP_012491472.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 isoform X2
            [Gossypium raimondii]
          Length = 1832

 Score = 2778 bits (7200), Expect = 0.0
 Identities = 1367/1542 (88%), Positives = 1461/1542 (94%), Gaps = 1/1542 (0%)
 Frame = -1

Query: 5350 MDIRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 5171
            MD+RFPYSPAEVAKVRVVQFGILSPDEIRQMSVV IEHSETTERGKPK+GGLSDPRLGTI
Sbjct: 1    MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKVGGLSDPRLGTI 60

Query: 5170 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDPK 4991
            DRK+KCETC ANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEED K
Sbjct: 61   DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120

Query: 4990 FKLALRIRNPKNRLKKILDACKNRSKCEGGDEIDVQGQESEEPVKKTRGGCGAQQPRLTI 4811
            FK AL+I+NPKNRLKKILDACKN++KCEGGDEIDVQGQ++EEPVKK+RGGCGAQQP+LTI
Sbjct: 121  FKQALKIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQDAEEPVKKSRGGCGAQQPKLTI 180

Query: 4810 DGLKMVAEYKVQKKKNDDQEQLPEPVERKQQLSAEKVLSILKRISDEDCQLLGLNPKFAR 4631
            DG+KM+AEYK Q+KKNDD EQLPEPVERKQ L+AE+VLS+LKRISDEDCQLLGLNPK+AR
Sbjct: 181  DGMKMIAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 240

Query: 4630 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQERNGAPAHIIS 4451
            PDWMILQVL        PSVMMDTSSRSEDDLTH LAM+IRHNENL+RQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIIS 300

Query: 4450 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4271
            EFAQLLQFH+ATYFDN+LPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 4270 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4091
            TVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4090 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 3911
            DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYST 480

Query: 3910 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 3731
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 3730 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3551
            LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600

Query: 3550 LQRNAAWHQDDEPGPITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3371
            L R +AWH + E G ITPGDTQVRIEKGE+LSGTLCKKTLGTS+GSLIHVIWEEVGPDAA
Sbjct: 601  LLRTSAWHSESETGSITPGDTQVRIEKGEVLSGTLCKKTLGTSSGSLIHVIWEEVGPDAA 660

Query: 3370 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAQTMEKINDTISNAKNEVKDLIRRAQEKAL 3191
            RKFLGHTQWLVNYWLLQN FSIGIGDTIADA TMEKIN+TIS AK++VK LI +AQ K L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISKAKDDVKQLIVKAQNKDL 720

Query: 3190 EAEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3011
            E EPGRTMMESFENKVNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMESFENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3010 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDFGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2831
            ACVGQQNVEGKRIPFGFIDRTLPHFTKDD+GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 2830 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWVESQK 2651
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVW+ESQK
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900

Query: 2650 LESLKIKKSEFDSMYKYEIDDPNWNP-DYMLPEAVEDLKTIREIRSVFEAEFQKLEADRL 2474
            L+SLK+KKSEFD +++Y+IDD NWNP  YMLPE +EDL+TI+E+R VF+AE  KLEADR 
Sbjct: 901  LDSLKMKKSEFDRVFRYKIDDENWNPTSYMLPEHIEDLRTIQELRDVFDAEVNKLEADRY 960

Query: 2473 QLGTEIATIGDNTWPLPVNIRRLVSNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVV 2294
            QLGTEIA  GD+ WPLPVN++RL+ NAQKTFK+DFRR SD+HP+EIV++VDKLQERLKVV
Sbjct: 961  QLGTEIAVTGDSNWPLPVNLKRLIWNAQKTFKVDFRRVSDLHPVEIVDSVDKLQERLKVV 1020

Query: 2293 HGDDYLSAEAQKNATLFFNILLRSALASKRVLNDYRLTREAFDWVIGEIESRFLQSLVAP 2114
             G D LS EAQKNATLFF ILLRS LASKRVL +YRLT+EAF+WVIGEIESRFLQSLVAP
Sbjct: 1021 PGADPLSVEAQKNATLFFCILLRSTLASKRVLQEYRLTKEAFEWVIGEIESRFLQSLVAP 1080

Query: 2113 GEMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINVAKKIKTPSLSIYL 1934
            GEMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIINVAKKIKTPSLS+YL
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140

Query: 1933 QPKASETKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIPEDVEFVKSYYEMPDED 1754
             P+AS+TKEKAKNVQCALEYTTLRSVT ATEVWYDPDPMSTII ED++FVKSYYEMPDE+
Sbjct: 1141 SPEASKTKEKAKNVQCALEYTTLRSVTHATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEE 1200

Query: 1753 IDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDSDLTCIFNDDNADKLILRIRI 1574
            + P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFD DLTCIFNDDNA+KLILRIRI
Sbjct: 1201 VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1260

Query: 1573 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQAKVNKFTQEEGFR 1394
            MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK +K +KF + +G++
Sbjct: 1261 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHSKASKFDEADGYK 1320

Query: 1393 TDSNEFMLDSEGINLLAVMCHDDVDASRTTSNHLVEIIEILGIEAVRKALLDELRVVISF 1214
            T   E++LD+EG+NLLAVMCH+DVDA RTTSNHL+E+IE+LGIEAVR++LLDELRVVISF
Sbjct: 1321 T-GEEWVLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISF 1379

Query: 1213 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAET 1034
            DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAE+
Sbjct: 1380 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAES 1439

Query: 1033 DYLQGVTESIMLGQLAPIGTGDCVLYLNEEMLKQAIEISLPSYMEGSLEFGMTPGRSPFG 854
            DYL+GVTE+IMLGQLAPIGTGDC LYLN+EMLK AIE+ LPSYMEG LEFGMTP RSP  
Sbjct: 1440 DYLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMEG-LEFGMTPARSPVS 1498

Query: 853  GTPYHEGMMSPGYLTSPNARLSPHADAQFSPFVQSMGIAFSP 728
            GTPYHEGMMSP YL SPN RLSP +DAQFSP+V   G+AFSP
Sbjct: 1499 GTPYHEGMMSPSYLLSPNLRLSPISDAQFSPYVG--GMAFSP 1538


>gb|KJB43259.1| hypothetical protein B456_007G190500 [Gossypium raimondii]
          Length = 1809

 Score = 2778 bits (7200), Expect = 0.0
 Identities = 1367/1542 (88%), Positives = 1461/1542 (94%), Gaps = 1/1542 (0%)
 Frame = -1

Query: 5350 MDIRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 5171
            MD+RFPYSPAEVAKVRVVQFGILSPDEIRQMSVV IEHSETTERGKPK+GGLSDPRLGTI
Sbjct: 1    MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKVGGLSDPRLGTI 60

Query: 5170 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDPK 4991
            DRK+KCETC ANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEED K
Sbjct: 61   DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120

Query: 4990 FKLALRIRNPKNRLKKILDACKNRSKCEGGDEIDVQGQESEEPVKKTRGGCGAQQPRLTI 4811
            FK AL+I+NPKNRLKKILDACKN++KCEGGDEIDVQGQ++EEPVKK+RGGCGAQQP+LTI
Sbjct: 121  FKQALKIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQDAEEPVKKSRGGCGAQQPKLTI 180

Query: 4810 DGLKMVAEYKVQKKKNDDQEQLPEPVERKQQLSAEKVLSILKRISDEDCQLLGLNPKFAR 4631
            DG+KM+AEYK Q+KKNDD EQLPEPVERKQ L+AE+VLS+LKRISDEDCQLLGLNPK+AR
Sbjct: 181  DGMKMIAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 240

Query: 4630 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQERNGAPAHIIS 4451
            PDWMILQVL        PSVMMDTSSRSEDDLTH LAM+IRHNENL+RQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIIS 300

Query: 4450 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4271
            EFAQLLQFH+ATYFDN+LPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 4270 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4091
            TVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4090 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 3911
            DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYST 480

Query: 3910 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 3731
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 3730 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3551
            LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600

Query: 3550 LQRNAAWHQDDEPGPITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3371
            L R +AWH + E G ITPGDTQVRIEKGE+LSGTLCKKTLGTS+GSLIHVIWEEVGPDAA
Sbjct: 601  LLRTSAWHSESETGSITPGDTQVRIEKGEVLSGTLCKKTLGTSSGSLIHVIWEEVGPDAA 660

Query: 3370 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAQTMEKINDTISNAKNEVKDLIRRAQEKAL 3191
            RKFLGHTQWLVNYWLLQN FSIGIGDTIADA TMEKIN+TIS AK++VK LI +AQ K L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISKAKDDVKQLIVKAQNKDL 720

Query: 3190 EAEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3011
            E EPGRTMMESFENKVNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMESFENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3010 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDFGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2831
            ACVGQQNVEGKRIPFGFIDRTLPHFTKDD+GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 2830 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWVESQK 2651
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVW+ESQK
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900

Query: 2650 LESLKIKKSEFDSMYKYEIDDPNWNP-DYMLPEAVEDLKTIREIRSVFEAEFQKLEADRL 2474
            L+SLK+KKSEFD +++Y+IDD NWNP  YMLPE +EDL+TI+E+R VF+AE  KLEADR 
Sbjct: 901  LDSLKMKKSEFDRVFRYKIDDENWNPTSYMLPEHIEDLRTIQELRDVFDAEVNKLEADRY 960

Query: 2473 QLGTEIATIGDNTWPLPVNIRRLVSNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVV 2294
            QLGTEIA  GD+ WPLPVN++RL+ NAQKTFK+DFRR SD+HP+EIV++VDKLQERLKVV
Sbjct: 961  QLGTEIAVTGDSNWPLPVNLKRLIWNAQKTFKVDFRRVSDLHPVEIVDSVDKLQERLKVV 1020

Query: 2293 HGDDYLSAEAQKNATLFFNILLRSALASKRVLNDYRLTREAFDWVIGEIESRFLQSLVAP 2114
             G D LS EAQKNATLFF ILLRS LASKRVL +YRLT+EAF+WVIGEIESRFLQSLVAP
Sbjct: 1021 PGADPLSVEAQKNATLFFCILLRSTLASKRVLQEYRLTKEAFEWVIGEIESRFLQSLVAP 1080

Query: 2113 GEMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINVAKKIKTPSLSIYL 1934
            GEMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIINVAKKIKTPSLS+YL
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140

Query: 1933 QPKASETKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIPEDVEFVKSYYEMPDED 1754
             P+AS+TKEKAKNVQCALEYTTLRSVT ATEVWYDPDPMSTII ED++FVKSYYEMPDE+
Sbjct: 1141 SPEASKTKEKAKNVQCALEYTTLRSVTHATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEE 1200

Query: 1753 IDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDSDLTCIFNDDNADKLILRIRI 1574
            + P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFD DLTCIFNDDNA+KLILRIRI
Sbjct: 1201 VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1260

Query: 1573 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQAKVNKFTQEEGFR 1394
            MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK +K +KF + +G++
Sbjct: 1261 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHSKASKFDEADGYK 1320

Query: 1393 TDSNEFMLDSEGINLLAVMCHDDVDASRTTSNHLVEIIEILGIEAVRKALLDELRVVISF 1214
            T   E++LD+EG+NLLAVMCH+DVDA RTTSNHL+E+IE+LGIEAVR++LLDELRVVISF
Sbjct: 1321 T-GEEWVLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISF 1379

Query: 1213 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAET 1034
            DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAE+
Sbjct: 1380 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAES 1439

Query: 1033 DYLQGVTESIMLGQLAPIGTGDCVLYLNEEMLKQAIEISLPSYMEGSLEFGMTPGRSPFG 854
            DYL+GVTE+IMLGQLAPIGTGDC LYLN+EMLK AIE+ LPSYMEG LEFGMTP RSP  
Sbjct: 1440 DYLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMEG-LEFGMTPARSPVS 1498

Query: 853  GTPYHEGMMSPGYLTSPNARLSPHADAQFSPFVQSMGIAFSP 728
            GTPYHEGMMSP YL SPN RLSP +DAQFSP+V   G+AFSP
Sbjct: 1499 GTPYHEGMMSPSYLLSPNLRLSPISDAQFSPYVG--GMAFSP 1538


>ref|XP_012491467.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 isoform X1
            [Gossypium raimondii] gi|823191464|ref|XP_012491468.1|
            PREDICTED: DNA-directed RNA polymerase II subunit 1
            isoform X1 [Gossypium raimondii]
            gi|823191467|ref|XP_012491470.1| PREDICTED: DNA-directed
            RNA polymerase II subunit 1 isoform X1 [Gossypium
            raimondii] gi|823191470|ref|XP_012491471.1| PREDICTED:
            DNA-directed RNA polymerase II subunit 1 isoform X1
            [Gossypium raimondii] gi|763776132|gb|KJB43255.1|
            hypothetical protein B456_007G190500 [Gossypium
            raimondii] gi|763776133|gb|KJB43256.1| hypothetical
            protein B456_007G190500 [Gossypium raimondii]
            gi|763776135|gb|KJB43258.1| hypothetical protein
            B456_007G190500 [Gossypium raimondii]
          Length = 1846

 Score = 2778 bits (7200), Expect = 0.0
 Identities = 1367/1542 (88%), Positives = 1461/1542 (94%), Gaps = 1/1542 (0%)
 Frame = -1

Query: 5350 MDIRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 5171
            MD+RFPYSPAEVAKVRVVQFGILSPDEIRQMSVV IEHSETTERGKPK+GGLSDPRLGTI
Sbjct: 1    MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKVGGLSDPRLGTI 60

Query: 5170 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDPK 4991
            DRK+KCETC ANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEED K
Sbjct: 61   DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120

Query: 4990 FKLALRIRNPKNRLKKILDACKNRSKCEGGDEIDVQGQESEEPVKKTRGGCGAQQPRLTI 4811
            FK AL+I+NPKNRLKKILDACKN++KCEGGDEIDVQGQ++EEPVKK+RGGCGAQQP+LTI
Sbjct: 121  FKQALKIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQDAEEPVKKSRGGCGAQQPKLTI 180

Query: 4810 DGLKMVAEYKVQKKKNDDQEQLPEPVERKQQLSAEKVLSILKRISDEDCQLLGLNPKFAR 4631
            DG+KM+AEYK Q+KKNDD EQLPEPVERKQ L+AE+VLS+LKRISDEDCQLLGLNPK+AR
Sbjct: 181  DGMKMIAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 240

Query: 4630 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQERNGAPAHIIS 4451
            PDWMILQVL        PSVMMDTSSRSEDDLTH LAM+IRHNENL+RQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIIS 300

Query: 4450 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4271
            EFAQLLQFH+ATYFDN+LPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 4270 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4091
            TVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4090 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 3911
            DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYST 480

Query: 3910 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 3731
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 3730 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3551
            LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600

Query: 3550 LQRNAAWHQDDEPGPITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3371
            L R +AWH + E G ITPGDTQVRIEKGE+LSGTLCKKTLGTS+GSLIHVIWEEVGPDAA
Sbjct: 601  LLRTSAWHSESETGSITPGDTQVRIEKGEVLSGTLCKKTLGTSSGSLIHVIWEEVGPDAA 660

Query: 3370 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAQTMEKINDTISNAKNEVKDLIRRAQEKAL 3191
            RKFLGHTQWLVNYWLLQN FSIGIGDTIADA TMEKIN+TIS AK++VK LI +AQ K L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISKAKDDVKQLIVKAQNKDL 720

Query: 3190 EAEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3011
            E EPGRTMMESFENKVNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMESFENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3010 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDFGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2831
            ACVGQQNVEGKRIPFGFIDRTLPHFTKDD+GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 2830 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWVESQK 2651
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVW+ESQK
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900

Query: 2650 LESLKIKKSEFDSMYKYEIDDPNWNP-DYMLPEAVEDLKTIREIRSVFEAEFQKLEADRL 2474
            L+SLK+KKSEFD +++Y+IDD NWNP  YMLPE +EDL+TI+E+R VF+AE  KLEADR 
Sbjct: 901  LDSLKMKKSEFDRVFRYKIDDENWNPTSYMLPEHIEDLRTIQELRDVFDAEVNKLEADRY 960

Query: 2473 QLGTEIATIGDNTWPLPVNIRRLVSNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVV 2294
            QLGTEIA  GD+ WPLPVN++RL+ NAQKTFK+DFRR SD+HP+EIV++VDKLQERLKVV
Sbjct: 961  QLGTEIAVTGDSNWPLPVNLKRLIWNAQKTFKVDFRRVSDLHPVEIVDSVDKLQERLKVV 1020

Query: 2293 HGDDYLSAEAQKNATLFFNILLRSALASKRVLNDYRLTREAFDWVIGEIESRFLQSLVAP 2114
             G D LS EAQKNATLFF ILLRS LASKRVL +YRLT+EAF+WVIGEIESRFLQSLVAP
Sbjct: 1021 PGADPLSVEAQKNATLFFCILLRSTLASKRVLQEYRLTKEAFEWVIGEIESRFLQSLVAP 1080

Query: 2113 GEMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINVAKKIKTPSLSIYL 1934
            GEMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIINVAKKIKTPSLS+YL
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140

Query: 1933 QPKASETKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIPEDVEFVKSYYEMPDED 1754
             P+AS+TKEKAKNVQCALEYTTLRSVT ATEVWYDPDPMSTII ED++FVKSYYEMPDE+
Sbjct: 1141 SPEASKTKEKAKNVQCALEYTTLRSVTHATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEE 1200

Query: 1753 IDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDSDLTCIFNDDNADKLILRIRI 1574
            + P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFD DLTCIFNDDNA+KLILRIRI
Sbjct: 1201 VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1260

Query: 1573 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQAKVNKFTQEEGFR 1394
            MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK +K +KF + +G++
Sbjct: 1261 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHSKASKFDEADGYK 1320

Query: 1393 TDSNEFMLDSEGINLLAVMCHDDVDASRTTSNHLVEIIEILGIEAVRKALLDELRVVISF 1214
            T   E++LD+EG+NLLAVMCH+DVDA RTTSNHL+E+IE+LGIEAVR++LLDELRVVISF
Sbjct: 1321 T-GEEWVLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISF 1379

Query: 1213 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAET 1034
            DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAE+
Sbjct: 1380 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAES 1439

Query: 1033 DYLQGVTESIMLGQLAPIGTGDCVLYLNEEMLKQAIEISLPSYMEGSLEFGMTPGRSPFG 854
            DYL+GVTE+IMLGQLAPIGTGDC LYLN+EMLK AIE+ LPSYMEG LEFGMTP RSP  
Sbjct: 1440 DYLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMEG-LEFGMTPARSPVS 1498

Query: 853  GTPYHEGMMSPGYLTSPNARLSPHADAQFSPFVQSMGIAFSP 728
            GTPYHEGMMSP YL SPN RLSP +DAQFSP+V   G+AFSP
Sbjct: 1499 GTPYHEGMMSPSYLLSPNLRLSPISDAQFSPYVG--GMAFSP 1538


>ref|XP_008448514.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
            subunit 1 [Cucumis melo]
          Length = 1837

 Score = 2777 bits (7198), Expect = 0.0
 Identities = 1364/1541 (88%), Positives = 1462/1541 (94%)
 Frame = -1

Query: 5350 MDIRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 5171
            MD+RFPYSPAEVAKVR+VQFGILSPDEIRQMSVV IEH ETTERGKPK+ GLSDPRLGTI
Sbjct: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60

Query: 5170 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDPK 4991
            DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMKTVL+IMR VCFNCSKIL DEEDPK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120

Query: 4990 FKLALRIRNPKNRLKKILDACKNRSKCEGGDEIDVQGQESEEPVKKTRGGCGAQQPRLTI 4811
            FK ALRI+NPKNRL+KILDACKN++KCEGGDEIDVQGQ+S++PVKK+RGGCGAQQP++TI
Sbjct: 121  FKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKITI 180

Query: 4810 DGLKMVAEYKVQKKKNDDQEQLPEPVERKQQLSAEKVLSILKRISDEDCQLLGLNPKFAR 4631
            +G+KM AEYK Q+KKNDDQEQLPEPVERKQ L+AE+VL ILKRI+D+DC+LLGLNPK+AR
Sbjct: 181  EGMKMTAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGILKRITDDDCKLLGLNPKYAR 240

Query: 4630 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQERNGAPAHIIS 4451
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAM+IRHNENL+RQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300

Query: 4450 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4271
            EFAQLLQFHIATYFDN+LPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 4270 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4091
            TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4090 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 3911
            DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 3910 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 3731
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 3730 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3551
            LLGCRKITKRDTFI KDVFMNILMWWEDFDGKIPAPAILKP+PLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600

Query: 3550 LQRNAAWHQDDEPGPITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3371
            L R +AWH + E G +TPGDT VRIEKGELLSGTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LTRTSAWHSESETGHVTPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660

Query: 3370 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAQTMEKINDTISNAKNEVKDLIRRAQEKAL 3191
            RKFLGHTQWLVNYWLLQN FSIGIGDTIADA TMEKIN+TIS AKNEVK+LI++AQE++L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720

Query: 3190 EAEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3011
            E EPGRTMM+SFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3010 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDFGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2831
            ACVGQQNVEGKRIPFGFIDRTLPHFTKDD+GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 2830 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWVESQK 2651
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVW+ESQK
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900

Query: 2650 LESLKIKKSEFDSMYKYEIDDPNWNPDYMLPEAVEDLKTIREIRSVFEAEFQKLEADRLQ 2471
            L+SLK+KK EF+ +++YE +D NW P+YMLPE VEDLKTIRE R+VFEAE QKLEADR Q
Sbjct: 901  LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960

Query: 2470 LGTEIATIGDNTWPLPVNIRRLVSNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVH 2291
            LGTEIAT G+N+WP+PVN++RL+ NAQKTFKIDFRR SDMHPMEIVEA+DKLQERLKVV 
Sbjct: 961  LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020

Query: 2290 GDDYLSAEAQKNATLFFNILLRSALASKRVLNDYRLTREAFDWVIGEIESRFLQSLVAPG 2111
            G+D LS EAQKNATLFFNILLRS  ASKRVL++YRLTREAF+WVIGEIESRFLQSLVAPG
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080

Query: 2110 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINVAKKIKTPSLSIYLQ 1931
            EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIINVAK+IKTPSLS+YL+
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140

Query: 1930 PKASETKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIPEDVEFVKSYYEMPDEDI 1751
            P+A++TKE+AK VQCALEYTTLRSVTQATEVWYDPDPMSTII ED++FVKSYYEMPDE+I
Sbjct: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 1200

Query: 1750 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDSDLTCIFNDDNADKLILRIRIM 1571
             P+KISPWLLRIELNREMMVDKKLSMA+IAEKINLEFD DLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 1570 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQAKVNKFTQEEGFRT 1391
            NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK  KVNKF + EGF+ 
Sbjct: 1261 NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKP 1320

Query: 1390 DSNEFMLDSEGINLLAVMCHDDVDASRTTSNHLVEIIEILGIEAVRKALLDELRVVISFD 1211
            +  E+MLD+EG+NLLAVMCH+DVDA RTTSNHL+E+IE+LGIEAVR++LLDELRVVISFD
Sbjct: 1321 EM-EWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1379

Query: 1210 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAETD 1031
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAETD
Sbjct: 1380 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 1439

Query: 1030 YLQGVTESIMLGQLAPIGTGDCVLYLNEEMLKQAIEISLPSYMEGSLEFGMTPGRSPFGG 851
            +L+GVTE+IMLGQLAPIGTG C LYLN+EMLK AIE+ LPSY++G L+FGMTP RSP  G
Sbjct: 1440 HLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDG-LDFGMTPSRSPISG 1498

Query: 850  TPYHEGMMSPGYLTSPNARLSPHADAQFSPFVQSMGIAFSP 728
            TPYHEGMMSP YL SPN RLSP +DAQFSP+V   G+AFSP
Sbjct: 1499 TPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVG--GMAFSP 1537


>ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Elaeis
            guineensis]
          Length = 1842

 Score = 2775 bits (7194), Expect = 0.0
 Identities = 1371/1542 (88%), Positives = 1456/1542 (94%), Gaps = 1/1542 (0%)
 Frame = -1

Query: 5350 MDIRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 5171
            MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSVV IEHSET ERGKPK GGLSDPRLGTI
Sbjct: 1    MDMRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60

Query: 5170 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDPK 4991
            DRKMKCETCMANMAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADE+D +
Sbjct: 61   DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120

Query: 4990 FKLALRIRNPKNRLKKILDACKNRSKCEGGDEIDVQGQE-SEEPVKKTRGGCGAQQPRLT 4814
            FK AL+IRNPK+RLK+I DACK + KC GGD+IDVQ Q+ SEEP+KK+RGGCGAQQP +T
Sbjct: 121  FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKSRGGCGAQQPNIT 180

Query: 4813 IDGLKMVAEYKVQKKKNDDQEQLPEPVERKQQLSAEKVLSILKRISDEDCQLLGLNPKFA 4634
            IDG+KM+AEYK  KKK+DDQEQLPEPVERKQ LSAE+VLS+LKRISDEDC LLGL+PK+A
Sbjct: 181  IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLSPKYA 240

Query: 4633 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQERNGAPAHII 4454
            RPDWMILQVL        PSVMMDTSSRSEDDLTHQLAM+IRHNENL+RQERNGAPAHII
Sbjct: 241  RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300

Query: 4453 SEFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 4274
            +EFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301  TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360

Query: 4273 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 4094
            RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361  RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420

Query: 4093 RDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 3914
            R+DGQRLDLRYLKKSSD HLELGYKVERHL DGD+VLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421  REDGQRLDLRYLKKSSDHHLELGYKVERHLMDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 480

Query: 3913 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 3734
            TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481  TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540

Query: 3733 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 3554
            TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541  TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600

Query: 3553 NLQRNAAWHQDDEPGPITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 3374
            NL R +AWH + E G ITPGDT VRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA
Sbjct: 601  NLIRTSAWHSEAETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 660

Query: 3373 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAQTMEKINDTISNAKNEVKDLIRRAQEKA 3194
            ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADA TMEKIN+TIS AKN+VK+LI+ AQEK 
Sbjct: 661  ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 720

Query: 3193 LEAEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 3014
            LEAEPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721  LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780

Query: 3013 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDFGPESRGFVENSYLRGLTPQEFFFHAMGGR 2834
            TACVGQQNVEGKRIP+GFIDRTLPHFTKDD+GPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781  TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840

Query: 2833 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWVESQ 2654
            EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVW+ESQ
Sbjct: 841  EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900

Query: 2653 KLESLKIKKSEFDSMYKYEIDDPNWNPDYMLPEAVEDLKTIREIRSVFEAEFQKLEADRL 2474
            KL+SLK+KKS+FD ++KYEIDD NWNP YMLPE VEDLKTIRE R+VF+AE QKLEADR 
Sbjct: 901  KLDSLKMKKSDFDRVFKYEIDDDNWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 960

Query: 2473 QLGTEIATIGDNTWPLPVNIRRLVSNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVV 2294
            QLGTEIAT GDNTWPLPVN++RL+ NAQKTFKID RRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 961  QLGTEIATTGDNTWPLPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1020

Query: 2293 HGDDYLSAEAQKNATLFFNILLRSALASKRVLNDYRLTREAFDWVIGEIESRFLQSLVAP 2114
             GDD+LS EAQKNATLFFNILLRS  ASKRVL +YRLTREAF+WVIGEIESRFLQSLVAP
Sbjct: 1021 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080

Query: 2113 GEMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINVAKKIKTPSLSIYL 1934
            GEMIGC+AAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIINVAKKIKTPSLS+YL
Sbjct: 1081 GEMIGCIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140

Query: 1933 QPKASETKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIPEDVEFVKSYYEMPDED 1754
            +P+ ++ KE AKNVQCALEYTTLRSVT ATE+WYDPDPMSTII EDVEFVKSYYEMPDED
Sbjct: 1141 KPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1200

Query: 1753 IDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDSDLTCIFNDDNADKLILRIRI 1574
            I P+KISPWLLRIELNREMMVDKKLSMADIAEKIN EF  DLTCIFNDDNADKLILRIRI
Sbjct: 1201 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFADDLTCIFNDDNADKLILRIRI 1260

Query: 1573 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQAKVNKFTQEEGFR 1394
            MNDEAPKGEL DESAEDDVFLK+IESNMLTEMALRGIPDINKVFIK  KVN+F + EGF+
Sbjct: 1261 MNDEAPKGELQDESAEDDVFLKRIESNMLTEMALRGIPDINKVFIKSGKVNRFDENEGFK 1320

Query: 1393 TDSNEFMLDSEGINLLAVMCHDDVDASRTTSNHLVEIIEILGIEAVRKALLDELRVVISF 1214
             D  E+MLD+EG+NLLAVMCH+DVDA+RTTSNHL+E+IE+LGIEAVR++LLDELRVVISF
Sbjct: 1321 ADV-EWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISF 1379

Query: 1213 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAET 1034
            DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAV+AET
Sbjct: 1380 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAET 1439

Query: 1033 DYLQGVTESIMLGQLAPIGTGDCVLYLNEEMLKQAIEISLPSYMEGSLEFGMTPGRSPFG 854
            D+L+GVTE+IMLGQLAPIGTGDC LYLN++ML+QAIE+ LPSYMEG LEFGMTP RSP  
Sbjct: 1440 DHLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYMEG-LEFGMTPSRSPIS 1498

Query: 853  GTPYHEGMMSPGYLTSPNARLSPHADAQFSPFVQSMGIAFSP 728
            GTPYHEGMMSP YL SPN R SP  DAQFSP+V   G+ FSP
Sbjct: 1499 GTPYHEGMMSPSYLLSPNVRSSPITDAQFSPYVG--GMTFSP 1538


>ref|XP_007203058.1| hypothetical protein PRUPE_ppa000093mg [Prunus persica]
            gi|462398589|gb|EMJ04257.1| hypothetical protein
            PRUPE_ppa000093mg [Prunus persica]
          Length = 1844

 Score = 2774 bits (7190), Expect = 0.0
 Identities = 1372/1541 (89%), Positives = 1455/1541 (94%)
 Frame = -1

Query: 5350 MDIRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 5171
            MDIRFP+SPAEVAKVR VQFGILSPDEIRQMSVV IEHSET   GKPK  GLSDPRLGTI
Sbjct: 1    MDIRFPFSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMLGGKPKTAGLSDPRLGTI 60

Query: 5170 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDPK 4991
            DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKIL DE+D K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEDDHK 120

Query: 4990 FKLALRIRNPKNRLKKILDACKNRSKCEGGDEIDVQGQESEEPVKKTRGGCGAQQPRLTI 4811
            FK ALRI++PKNRLKKILDACKN++KC+GGDEIDVQGQESEEPVKK+RGGCGAQQP+L+I
Sbjct: 121  FKQALRIKSPKNRLKKILDACKNKTKCDGGDEIDVQGQESEEPVKKSRGGCGAQQPKLSI 180

Query: 4810 DGLKMVAEYKVQKKKNDDQEQLPEPVERKQQLSAEKVLSILKRISDEDCQLLGLNPKFAR 4631
            +G+KM AEYK Q+KK+DDQEQLPEPVERKQ L+AE+VLS+LKRISDED QLLGLNPK+AR
Sbjct: 181  EGMKMNAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDSQLLGLNPKYAR 240

Query: 4630 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQERNGAPAHIIS 4451
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAM+IRHNENL+RQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300

Query: 4450 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4271
            EFAQLLQFHIATYFDN+LPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 4270 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4091
            TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 420

Query: 4090 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 3911
            DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 3910 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 3731
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 3730 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3551
            LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600

Query: 3550 LQRNAAWHQDDEPGPITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3371
            LQR +AWH + E G ITPGDT VRIEKGELL+GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LQRTSAWHSEAESGNITPGDTFVRIEKGELLAGTLCKKALGTSTGSLIHVIWEEVGPDAA 660

Query: 3370 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAQTMEKINDTISNAKNEVKDLIRRAQEKAL 3191
            RKFLGHTQWLVNYWLLQN FSIGIGDTIADA TMEKIN+TIS AKNEVKDLI +AQ K L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKDLISKAQSKQL 720

Query: 3190 EAEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3011
            EAEPGRTMM+SFENKVNQVLN+ARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EAEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3010 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDFGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2831
            ACVGQQNVEGKRIP+GFIDRTLPHFTKDD+GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 2830 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWVESQK 2651
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVW+ESQK
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900

Query: 2650 LESLKIKKSEFDSMYKYEIDDPNWNPDYMLPEAVEDLKTIREIRSVFEAEFQKLEADRLQ 2471
            L+SLK+KKSEFD  + YE+DD NWNPDYML E VEDLKTIRE R+VF+AE QKLE DRLQ
Sbjct: 901  LDSLKMKKSEFDKTFSYELDDENWNPDYMLHEHVEDLKTIREFRNVFDAEVQKLETDRLQ 960

Query: 2470 LGTEIATIGDNTWPLPVNIRRLVSNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVH 2291
            LGTEIA  GDN+WPLPVN++RL+ NAQKTFKIDFRR SDMHPMEIVEA+DKLQERLKVV 
Sbjct: 961  LGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLKVVP 1020

Query: 2290 GDDYLSAEAQKNATLFFNILLRSALASKRVLNDYRLTREAFDWVIGEIESRFLQSLVAPG 2111
            GDD LS EAQKNATLFF+ILLRS  ASKRVL++YRLTREAF+WVIGEIESRFLQSLVAPG
Sbjct: 1021 GDDLLSVEAQKNATLFFSILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080

Query: 2110 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINVAKKIKTPSLSIYLQ 1931
            EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIINVAK+IKTPSLS+YL+
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140

Query: 1930 PKASETKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIPEDVEFVKSYYEMPDEDI 1751
            P+A++TKE+AKNVQCALEYTTLRSVTQATEVWYDPDPMSTII EDV+FV SYYEMPDE++
Sbjct: 1141 PEANKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVNSYYEMPDEEV 1200

Query: 1750 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDSDLTCIFNDDNADKLILRIRIM 1571
            +PDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFD DLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 NPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 1570 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQAKVNKFTQEEGFRT 1391
            N EAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK  KVNKF   EGF+ 
Sbjct: 1261 NAEAPKGELVDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDPNEGFKA 1320

Query: 1390 DSNEFMLDSEGINLLAVMCHDDVDASRTTSNHLVEIIEILGIEAVRKALLDELRVVISFD 1211
            +  E+MLD+EG+NLLAV+CHDDVDA RTTSNHL+EI+EILGIEAVR++LLDELRVVISFD
Sbjct: 1321 E-QEWMLDTEGVNLLAVLCHDDVDARRTTSNHLIEILEILGIEAVRRSLLDELRVVISFD 1379

Query: 1210 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAETD 1031
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAV+AETD
Sbjct: 1380 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETD 1439

Query: 1030 YLQGVTESIMLGQLAPIGTGDCVLYLNEEMLKQAIEISLPSYMEGSLEFGMTPGRSPFGG 851
            YL+GVTE+IMLGQLAPIGTGDC LYLN+EMLK AIE+ LPSYM+G L+FGMTP RSP  G
Sbjct: 1440 YLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMDG-LDFGMTPSRSPVSG 1498

Query: 850  TPYHEGMMSPGYLTSPNARLSPHADAQFSPFVQSMGIAFSP 728
            TPYHEGMMSP YL SPN RLSP +DAQFSP+V   G+AFSP
Sbjct: 1499 TPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVG--GMAFSP 1537


>ref|XP_007046584.1| DNA-directed RNA polymerase II subunit RPB1 isoform 1 [Theobroma
            cacao] gi|590702281|ref|XP_007046585.1| DNA-directed RNA
            polymerase II subunit RPB1 isoform 1 [Theobroma cacao]
            gi|590702285|ref|XP_007046586.1| DNA-directed RNA
            polymerase II subunit RPB1 isoform 1 [Theobroma cacao]
            gi|508698845|gb|EOX90741.1| DNA-directed RNA polymerase
            II subunit RPB1 isoform 1 [Theobroma cacao]
            gi|508698846|gb|EOX90742.1| DNA-directed RNA polymerase
            II subunit RPB1 isoform 1 [Theobroma cacao]
            gi|508698847|gb|EOX90743.1| DNA-directed RNA polymerase
            II subunit RPB1 isoform 1 [Theobroma cacao]
          Length = 1861

 Score = 2773 bits (7187), Expect = 0.0
 Identities = 1365/1542 (88%), Positives = 1459/1542 (94%), Gaps = 1/1542 (0%)
 Frame = -1

Query: 5350 MDIRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 5171
            MD+RFPYSPAEVAKVR+VQFGILSPDEIRQMSVV IEH ETTERGKPK+GGLSDPRLGTI
Sbjct: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60

Query: 5170 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDPK 4991
            DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEE+ K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEEHK 120

Query: 4990 FKLALRIRNPKNRLKKILDACKNRSKCEGGDEIDVQGQESEEPVKKTRGGCGAQQPRLTI 4811
            FK AL+I+NPKNRLKKILDACKN+SKCEGGDEIDVQGQ++EEPVKK+RGGCGAQQP+L+I
Sbjct: 121  FKQALKIKNPKNRLKKILDACKNKSKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLSI 180

Query: 4810 DGLKMVAEYKVQKKKNDDQEQLPEPVERKQQLSAEKVLSILKRISDEDCQLLGLNPKFAR 4631
            DG+KM+AEYK Q+K+NDDQEQLPEPVERKQ L+AE+VLS+LKRISDEDCQLLGLNPKFAR
Sbjct: 181  DGMKMIAEYKPQRKRNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKFAR 240

Query: 4630 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQERNGAPAHIIS 4451
            PDWMILQVL        PSVMMDTSSRSEDDLTH LAM+IRHNENL+RQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIIS 300

Query: 4450 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4271
            EFAQLLQFH+ATYFDN+LPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 4270 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4091
            TVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4090 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 3911
            DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYST 480

Query: 3910 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 3731
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 3730 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3551
            LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600

Query: 3550 LQRNAAWHQDDEPGPITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3371
            L RN+AWH + E G ITPGDTQVRIEKGELLSGTLCKK LGTS+GSLIHVIWEEVGPDAA
Sbjct: 601  LLRNSAWHSETETGFITPGDTQVRIEKGELLSGTLCKKALGTSSGSLIHVIWEEVGPDAA 660

Query: 3370 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAQTMEKINDTISNAKNEVKDLIRRAQEKAL 3191
            RKFLGHTQWLVNYWLLQN FSIGIGDTIADA TMEKIN+TIS AK EVK+LI +AQ K L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKEEVKNLIVKAQNKDL 720

Query: 3190 EAEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3011
            E EPGRTMMESFENKVNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMESFENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3010 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDFGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2831
            ACVGQQNVEGKRIPFGFIDRTLPHFTKDD+GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 2830 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWVESQK 2651
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VW+ESQK
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 900

Query: 2650 LESLKIKKSEFDSMYKYEIDDPNWNP-DYMLPEAVEDLKTIREIRSVFEAEFQKLEADRL 2474
            L+SLK+KKSEFD +++Y IDD +WNP  YMLPE +EDL+TI+E+R VFEAE QKL+ADR 
Sbjct: 901  LDSLKMKKSEFDRVFRYNIDDESWNPTSYMLPEHIEDLRTIQELRDVFEAEVQKLDADRY 960

Query: 2473 QLGTEIATIGDNTWPLPVNIRRLVSNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVV 2294
            QLGTEIA  GD+ WPLPVN++RL+ NAQKTFK+DFRR SD+HP+EIV++VDKLQERLKVV
Sbjct: 961  QLGTEIAVTGDSNWPLPVNLKRLIWNAQKTFKVDFRRVSDLHPVEIVDSVDKLQERLKVV 1020

Query: 2293 HGDDYLSAEAQKNATLFFNILLRSALASKRVLNDYRLTREAFDWVIGEIESRFLQSLVAP 2114
             G D LS EAQKNATLFF+ILLRS LASKRVL +YRLT+EAF+WVIGEIESRFLQSLVAP
Sbjct: 1021 PGTDPLSVEAQKNATLFFSILLRSTLASKRVLQEYRLTKEAFEWVIGEIESRFLQSLVAP 1080

Query: 2113 GEMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINVAKKIKTPSLSIYL 1934
            GEMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIINVAKKIKTPSLS+YL
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140

Query: 1933 QPKASETKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIPEDVEFVKSYYEMPDED 1754
             P+AS+TKEKAKNVQCALEYTTLRSVT ATEVWYDPDP STII ED++FVKSYYEMPDE+
Sbjct: 1141 SPEASKTKEKAKNVQCALEYTTLRSVTHATEVWYDPDPTSTIIEEDIDFVKSYYEMPDEE 1200

Query: 1753 IDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDSDLTCIFNDDNADKLILRIRI 1574
            + P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFD DLTCIFNDDNA+KLILRIRI
Sbjct: 1201 VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1260

Query: 1573 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQAKVNKFTQEEGFR 1394
            MNDE PKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK +K +KF + +G++
Sbjct: 1261 MNDEGPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHSKASKFDEADGYK 1320

Query: 1393 TDSNEFMLDSEGINLLAVMCHDDVDASRTTSNHLVEIIEILGIEAVRKALLDELRVVISF 1214
            T   E++LD+EG+NLLAVMCH+DVDA RTTSNHL+E+IE+LGIEAVR++LLDELRVVISF
Sbjct: 1321 T-GEEWVLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISF 1379

Query: 1213 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAET 1034
            DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAE+
Sbjct: 1380 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAES 1439

Query: 1033 DYLQGVTESIMLGQLAPIGTGDCVLYLNEEMLKQAIEISLPSYMEGSLEFGMTPGRSPFG 854
            DYL+GVTE+IMLGQLAPIGTGDC LYLN+EMLK AIE+ LPSYMEG LEFGMTP RSP  
Sbjct: 1440 DYLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMEG-LEFGMTPARSPVS 1498

Query: 853  GTPYHEGMMSPGYLTSPNARLSPHADAQFSPFVQSMGIAFSP 728
            GTPYHEGMMSP YL SPN RLSP  DAQFSP+V   G+AFSP
Sbjct: 1499 GTPYHEGMMSPSYLLSPNLRLSPITDAQFSPYVG--GMAFSP 1538


>ref|XP_008242006.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Prunus mume]
            gi|645273710|ref|XP_008242007.1| PREDICTED: DNA-directed
            RNA polymerase II subunit 1 [Prunus mume]
          Length = 1844

 Score = 2772 bits (7185), Expect = 0.0
 Identities = 1370/1541 (88%), Positives = 1455/1541 (94%)
 Frame = -1

Query: 5350 MDIRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 5171
            MDIRFP+SPAEVAKVR VQFGILSPDEIRQMSVV IEHSET   GKPK  GLSDPRLGTI
Sbjct: 1    MDIRFPFSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMLGGKPKTAGLSDPRLGTI 60

Query: 5170 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDPK 4991
            DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMKTVLS+MRCVCFNCSKIL DE+D K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSVMRCVCFNCSKILVDEDDHK 120

Query: 4990 FKLALRIRNPKNRLKKILDACKNRSKCEGGDEIDVQGQESEEPVKKTRGGCGAQQPRLTI 4811
            FK ALRI++PKNRLKKILDACKN++KC+GGDEIDVQGQESEEPVKK+RGGCGAQQP+L+I
Sbjct: 121  FKQALRIKSPKNRLKKILDACKNKTKCDGGDEIDVQGQESEEPVKKSRGGCGAQQPKLSI 180

Query: 4810 DGLKMVAEYKVQKKKNDDQEQLPEPVERKQQLSAEKVLSILKRISDEDCQLLGLNPKFAR 4631
            +G+KM AEYK Q+KK+DDQEQLPEPVERKQ L+AE+VLS+LKRISDED QLLGLNPK+AR
Sbjct: 181  EGMKMNAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDSQLLGLNPKYAR 240

Query: 4630 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQERNGAPAHIIS 4451
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAM+IRHNENL+RQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300

Query: 4450 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4271
            EFAQLLQFHIATYFDN+LPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 4270 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4091
            TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 420

Query: 4090 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 3911
            DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 3910 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 3731
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 3730 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3551
            LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600

Query: 3550 LQRNAAWHQDDEPGPITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3371
            LQR +AWH + E G +TPGDT VRIEKGELL+GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LQRTSAWHSEAESGNVTPGDTFVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 3370 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAQTMEKINDTISNAKNEVKDLIRRAQEKAL 3191
            RKFLGHTQWLVNYWLLQN FSIGIGDTIADA TMEKIN+TIS AKNEVKDLI +AQ K L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKDLISKAQSKQL 720

Query: 3190 EAEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3011
            EAEPGRTMM+SFENKVNQVLN+ARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EAEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3010 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDFGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2831
            ACVGQQNVEGKRIP+GFIDRTLPHFTKDD+GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 2830 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWVESQK 2651
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVW+ESQK
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900

Query: 2650 LESLKIKKSEFDSMYKYEIDDPNWNPDYMLPEAVEDLKTIREIRSVFEAEFQKLEADRLQ 2471
            L+SLK+KKSEFD  + YE+DD NWNPDYML E VEDLKTIRE R+VF+AE QKLE DRLQ
Sbjct: 901  LDSLKMKKSEFDKTFSYELDDENWNPDYMLHEHVEDLKTIREFRNVFDAEVQKLETDRLQ 960

Query: 2470 LGTEIATIGDNTWPLPVNIRRLVSNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVH 2291
            LGTEIA  GDN+WPLPVN++RL+ NAQKTFKIDFRR SDMHPMEIVEA+DKLQERLKVV 
Sbjct: 961  LGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLKVVP 1020

Query: 2290 GDDYLSAEAQKNATLFFNILLRSALASKRVLNDYRLTREAFDWVIGEIESRFLQSLVAPG 2111
            GDD LS EAQKNATLFF+ILLRS  ASKRVL++YRLTREAF+WVIGEIESRFLQSLVAPG
Sbjct: 1021 GDDLLSVEAQKNATLFFSILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080

Query: 2110 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINVAKKIKTPSLSIYLQ 1931
            EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIINVAK+IKTPSLS+YL+
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140

Query: 1930 PKASETKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIPEDVEFVKSYYEMPDEDI 1751
             +A++TKE+AKNVQCALEYTTLRSVTQATEVWYDPDPMSTII EDV+FV SYYEMPDE++
Sbjct: 1141 SEANKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVNSYYEMPDEEV 1200

Query: 1750 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDSDLTCIFNDDNADKLILRIRIM 1571
            +PDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFD DLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 NPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 1570 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQAKVNKFTQEEGFRT 1391
            N EAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK  KVNKF   EGF+ 
Sbjct: 1261 NAEAPKGELVDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDPSEGFKA 1320

Query: 1390 DSNEFMLDSEGINLLAVMCHDDVDASRTTSNHLVEIIEILGIEAVRKALLDELRVVISFD 1211
            +  E+MLD+EG+NLLAV+CHDDVDA RTTSNHL+EI+EILGIEAVR++LLDELRVVISFD
Sbjct: 1321 E-QEWMLDTEGVNLLAVLCHDDVDARRTTSNHLIEILEILGIEAVRRSLLDELRVVISFD 1379

Query: 1210 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAETD 1031
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAV+AETD
Sbjct: 1380 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETD 1439

Query: 1030 YLQGVTESIMLGQLAPIGTGDCVLYLNEEMLKQAIEISLPSYMEGSLEFGMTPGRSPFGG 851
            YL+GVTE+IMLGQLAPIGTGDC LYLN+EMLK AIE+ LPSYM+G L+FGMTP RSP  G
Sbjct: 1440 YLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMDG-LDFGMTPSRSPVSG 1498

Query: 850  TPYHEGMMSPGYLTSPNARLSPHADAQFSPFVQSMGIAFSP 728
            TPYHEGMMSP YL SPN RLSP +DAQFSP+V   G+AFSP
Sbjct: 1499 TPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVG--GMAFSP 1537


>ref|XP_004146161.2| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Cucumis sativus]
            gi|778674691|ref|XP_011650276.1| PREDICTED: DNA-directed
            RNA polymerase II subunit 1 [Cucumis sativus]
            gi|700200498|gb|KGN55631.1| hypothetical protein
            Csa_3G002510 [Cucumis sativus]
          Length = 1867

 Score = 2769 bits (7177), Expect = 0.0
 Identities = 1362/1541 (88%), Positives = 1459/1541 (94%)
 Frame = -1

Query: 5350 MDIRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 5171
            MD+RFPYSPAEVAKVR+VQFGILSPDEIRQMSVV IEH ETTERGKPK+ GLSDPRLGTI
Sbjct: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60

Query: 5170 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDPK 4991
            DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMKTVL+IMR VCFNCSKIL DEEDPK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120

Query: 4990 FKLALRIRNPKNRLKKILDACKNRSKCEGGDEIDVQGQESEEPVKKTRGGCGAQQPRLTI 4811
            FK ALRI+NPKNRL+KILDACKN++KCEGGDEIDVQGQ+S++PVKK+RGGCGAQQP+++I
Sbjct: 121  FKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKISI 180

Query: 4810 DGLKMVAEYKVQKKKNDDQEQLPEPVERKQQLSAEKVLSILKRISDEDCQLLGLNPKFAR 4631
            +G+KM AEYK Q+KKNDD EQLPEPVERKQ L+AE+VL ILKRI+DEDC+LLGLNPK+AR
Sbjct: 181  EGMKMTAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLGILKRITDEDCKLLGLNPKYAR 240

Query: 4630 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQERNGAPAHIIS 4451
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAM+IRHNENL+RQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300

Query: 4450 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4271
            EFAQLLQFHIATYFDN+LPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 4270 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4091
            TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4090 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 3911
            DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 3910 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 3731
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 3730 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3551
            LLGCRKITKRDTFI KDVFMN LMWWEDFDGKIPAPAILKP+PLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFITKDVFMNTLMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600

Query: 3550 LQRNAAWHQDDEPGPITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3371
            L R +AWH + E G ITPGDT VRIEKGELLSGTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LTRTSAWHSESETGHITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660

Query: 3370 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAQTMEKINDTISNAKNEVKDLIRRAQEKAL 3191
            RKFLGHTQWLVNYWLLQN FSIGIGDTIADA TMEKIN+TIS AKNEVK+LI++AQE++L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720

Query: 3190 EAEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3011
            E EPGRTMM+SFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3010 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDFGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2831
            ACVGQQNVEGKRIPFGFIDRTLPHFTKDD+GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 2830 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWVESQK 2651
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVW+ESQK
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900

Query: 2650 LESLKIKKSEFDSMYKYEIDDPNWNPDYMLPEAVEDLKTIREIRSVFEAEFQKLEADRLQ 2471
            L+SLK+KK EF+ +++YE +D NW P+YMLPE VEDLKTIRE R+VFEAE QKLEADR Q
Sbjct: 901  LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960

Query: 2470 LGTEIATIGDNTWPLPVNIRRLVSNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVH 2291
            LGTEIAT G+N+WP+PVN++RL+ NAQKTFKIDFRR SDMHPMEIVEA+DKLQERLKVV 
Sbjct: 961  LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020

Query: 2290 GDDYLSAEAQKNATLFFNILLRSALASKRVLNDYRLTREAFDWVIGEIESRFLQSLVAPG 2111
            G+D LS EAQKNATLFFNILLRS  ASKRVL++YRLTREAF+WVIGEIESRFLQSLVAPG
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080

Query: 2110 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINVAKKIKTPSLSIYLQ 1931
            EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIINVAK+IKTPSLS+YL+
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140

Query: 1930 PKASETKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIPEDVEFVKSYYEMPDEDI 1751
            P+A++TKE+AK VQCALEYTTLRSVTQATEVWYDPDPMSTII ED++FVKSYYEMPDE+I
Sbjct: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 1200

Query: 1750 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDSDLTCIFNDDNADKLILRIRIM 1571
             P+KISPWLLRIELNREMMVDKKLSMA+IAEKINLEFD DLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 1570 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQAKVNKFTQEEGFRT 1391
            NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK  KVNKF + EGF+ 
Sbjct: 1261 NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKP 1320

Query: 1390 DSNEFMLDSEGINLLAVMCHDDVDASRTTSNHLVEIIEILGIEAVRKALLDELRVVISFD 1211
            +  E+MLD+EG+NLLAVM H+DVDA RTTSNHL+E+IE+LGIEAVR++LLDELRVVISFD
Sbjct: 1321 EM-EWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1379

Query: 1210 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAETD 1031
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAETD
Sbjct: 1380 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 1439

Query: 1030 YLQGVTESIMLGQLAPIGTGDCVLYLNEEMLKQAIEISLPSYMEGSLEFGMTPGRSPFGG 851
            +L+GVTE+IMLGQLAPIGTG C LYLN+EMLK AIE+ LPSY++G L+FGMTP RSP  G
Sbjct: 1440 HLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDG-LDFGMTPSRSPISG 1498

Query: 850  TPYHEGMMSPGYLTSPNARLSPHADAQFSPFVQSMGIAFSP 728
            TPYHEGMMSP YL SPN RLSP +DAQFSP+V   G+AFSP
Sbjct: 1499 TPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVG--GMAFSP 1537