BLASTX nr result

ID: Gardenia21_contig00003454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00003454
         (2105 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDY10992.1| BnaA03g46510D [Brassica napus]                         74   5e-10
ref|XP_008377135.1| PREDICTED: endoplasmin homolog [Malus domest...    66   1e-07

>emb|CDY10992.1| BnaA03g46510D [Brassica napus]
          Length = 871

 Score = 73.9 bits (180), Expect = 5e-10
 Identities = 86/295 (29%), Positives = 113/295 (38%), Gaps = 10/295 (3%)
 Frame = -1

Query: 1364 EFGDVKKRSLHQDGHFMLMQKSFEFQAEVSHLMNTIINSFYSKKDFFPL*VCSSPMLLM* 1185
            E   + K+SL  +       + FEFQAEVS LM+ IINS YS KD F             
Sbjct: 63   ESESISKKSLRSNA------EKFEFQAEVSRLMDIIINSLYSNKDIF------------- 103

Query: 1184 GQSTCQILRKEVNLFDHSRCGFMFSLL**IQFRLQITDKEILGEGETRDPSEHFNFFFFG 1005
                   LR+ ++    +     F         L +TDK++LGEG+T             
Sbjct: 104  -------LRELISNASDALDKIRF---------LALTDKDVLGEGDTAK----------- 136

Query: 1004 CILMKAVYLAFCCYMYS*LLELSFGKLNYTNKQKIISFCDRSTGIAKEDMIKKLGAIANL 825
                               LE+   ++     +KIIS  DR  G+ KED+IK LG IA  
Sbjct: 137  -------------------LEI---QIKLDKAKKIISIRDRGIGMTKEDLIKNLGTIAKS 174

Query: 824  GT*YVHSFKWHCLGFIELDLSFTSKIWLYXXXXXXXXXXFRKCKQSRTII*LVNLVFPFL 645
            GT            F+E                        K + S  +    NL+  F 
Sbjct: 175  GT----------SAFVE------------------------KMQSSGDL----NLIGQFG 196

Query: 644  I-----YLLADYAEVISRHNDDKPDVGSA-----FATS*RCLK*TTCHGTEIRLH 510
            +     YL+ADY EVIS+HNDD   V  +     FA S          GTEIRLH
Sbjct: 197  VGFYSTYLVADYIEVISKHNDDIQHVWESKADGKFAVSEDTWNEPLGRGTEIRLH 251


>ref|XP_008377135.1| PREDICTED: endoplasmin homolog [Malus domestica]
          Length = 818

 Score = 65.9 bits (159), Expect = 1e-07
 Identities = 73/268 (27%), Positives = 104/268 (38%), Gaps = 5/268 (1%)
 Frame = -1

Query: 1298 FEFQAEVSHLMNTIINSFYSKKDFFPL*VCSSPMLLM*GQSTCQILRKEVNLFDHSRCGF 1119
            FEFQAEVS LM+ II+S YS KD F                    LR+ ++    +    
Sbjct: 80   FEFQAEVSRLMDIIIHSLYSNKDIF--------------------LRELISNASDALDKI 119

Query: 1118 MFSLL**IQFRLQITDKEILGEGETRDPSEHFNFFFFGCILMKAVYLAFCCYMYS*LLEL 939
             F         L +TDK++LGEG+  +                              LE+
Sbjct: 120  RF---------LALTDKDVLGEGDDTN------------------------------LEI 140

Query: 938  SFGKLNYTNKQKIISFCDRSTGIAKEDMIKKLGAIANLGT*YVHSFKWHCLGFIELDLSF 759
               ++    +++IIS  DR  G+ KED+IK LG IA  GT                  +F
Sbjct: 141  ---QIKLDKEKRIISIRDRGIGMTKEDLIKNLGTIAKSGT-----------------SAF 180

Query: 758  TSKIWLYXXXXXXXXXXFRKCKQSRTII*LVNLVFPFLIYLLADYAEVISRHNDDKPDV- 582
              K+               +      +I    + F + +YL+AD  EVIS+HNDDK  + 
Sbjct: 181  VEKM---------------QTSGDLNLIGQFGVGF-YSVYLVADNVEVISKHNDDKQHIW 224

Query: 581  ----GSAFATS*RCLK*TTCHGTEIRLH 510
                  +F  +          GTEIRLH
Sbjct: 225  ESKADGSFVVAEDTENEPLGRGTEIRLH 252


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