BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00003285
         (1335 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP07629.1| unnamed protein product [Coffea canephora]            432   e-139
gb|AKC88655.1| sigma factor [Francoa sonchifolia]                     404   e-129
ref|XP_007029868.1| RNApolymerase sigma subunit 2 [Theobroma cac...   402   e-129
ref|XP_010251515.1| PREDICTED: RNA polymerase sigma factor sigB-...   407   e-129
ref|XP_010251516.1| PREDICTED: RNA polymerase sigma factor sigB-...   407   e-129
ref|XP_009377635.1| PREDICTED: RNA polymerase sigma factor sigB ...   403   e-129
ref|XP_009377636.1| PREDICTED: RNA polymerase sigma factor sigB ...   403   e-129
ref|XP_010052664.1| PREDICTED: RNA polymerase sigma factor sigB ...   403   e-129
ref|XP_010052665.1| PREDICTED: RNA polymerase sigma factor sigB ...   403   e-129
ref|XP_008460092.1| PREDICTED: RNA polymerase sigma factor sigB ...   402   e-129
ref|XP_008460093.1| PREDICTED: RNA polymerase sigma factor sigB ...   402   e-129
ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB ...   401   e-129
ref|XP_007203880.1| hypothetical protein PRUPE_ppa006657mg [Prun...   402   e-129
ref|XP_010278441.1| PREDICTED: RNA polymerase sigma factor sigB-...   403   e-128
ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative ...   404   e-128
ref|XP_008240611.1| PREDICTED: RNA polymerase sigma factor sigB ...   401   e-128
ref|XP_011086680.1| PREDICTED: RNA polymerase sigma factor sigB ...   400   e-128
gb|KHG18437.1| RNA polymerase sigma factor rpoD [Gossypium arbor...   400   e-128
ref|XP_010097670.1| RNA polymerase sigma factor rpoD [Morus nota...   397   e-127
ref|XP_009792606.1| PREDICTED: RNA polymerase sigma factor sigB-...   402   e-127

>emb|CDP07629.1| unnamed protein product [Coffea canephora]
          Length = 615

 Score =  432 bits (1110), Expect(2) = e-139
 Identities = 218/244 (89%), Positives = 225/244 (92%)
 Frame = -1

Query: 1194 MQEIDYSDPXXXXXXXXXXXXXXTASEEHELSEGIQDLLKLETLHEQLVQRCGAEPTFAQ 1015
            +QEIDYSDP              TASEE ELSEGIQDLLKLETLHE+L QRCGAEPTFAQ
Sbjct: 296  IQEIDYSDPLRYLRGTATTSRLLTASEEQELSEGIQDLLKLETLHEELAQRCGAEPTFAQ 355

Query: 1014 WAAAAGVDQKTLRKRLNYGTICKDKMIKSNVRLVISIARNYQGAGMNLQDLVQEGCRGLV 835
            WAAAAGVDQKTLRKRLNYGT+ KDKMI SN+RLVISIARNYQGAGMNLQDLVQEGCRGLV
Sbjct: 356  WAAAAGVDQKTLRKRLNYGTLSKDKMIMSNIRLVISIARNYQGAGMNLQDLVQEGCRGLV 415

Query: 834  RGAEKFDAKKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLYSE 655
            RGAEKFDAKKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLYSE
Sbjct: 416  RGAEKFDAKKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLYSE 475

Query: 654  NGRHPDDEEVAEAAGLSMKRLSAVMLTPKTPRSLDQKIGLNQNLKPSEVIADPEAETSED 475
            NGRHPDDEEVAEAAGLSMKRLSAVMLTPK P+SLDQKIG+NQNLKPSEVIADPEAETSED
Sbjct: 476  NGRHPDDEEVAEAAGLSMKRLSAVMLTPKAPKSLDQKIGINQNLKPSEVIADPEAETSED 535

Query: 474  LLIK 463
            LL+K
Sbjct: 536  LLVK 539



 Score = 91.7 bits (226), Expect(2) = e-139
 Identities = 46/47 (97%), Positives = 46/47 (97%)
 Frame = -3

Query: 433 DGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKRRTKHLQQYLLS 293
           DGRMKTLQEIGELMGVSRERIRQIES AFRKLKNKRRTKHLQQYLLS
Sbjct: 569 DGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKRRTKHLQQYLLS 615


>gb|AKC88655.1| sigma factor [Francoa sonchifolia]
          Length = 562

 Score =  404 bits (1037), Expect(2) = e-129
 Identities = 197/244 (80%), Positives = 220/244 (90%)
 Frame = -1

Query: 1194 MQEIDYSDPXXXXXXXXXXXXXXTASEEHELSEGIQDLLKLETLHEQLVQRCGAEPTFAQ 1015
            +Q++DYSDP              T++EEHELS GIQDLLKLE L E+LV+RCG +PTFAQ
Sbjct: 243  IQDVDYSDPLRYLRGTTSTSRLLTSTEEHELSAGIQDLLKLERLEEELVERCGCQPTFAQ 302

Query: 1014 WAAAAGVDQKTLRKRLNYGTICKDKMIKSNVRLVISIARNYQGAGMNLQDLVQEGCRGLV 835
            WAAAA VD KTLR+RLNYG +CKDKMIKSN+RLVISIA+NYQGAGMNLQDLVQEGCRGLV
Sbjct: 303  WAAAARVDNKTLRRRLNYGIVCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLV 362

Query: 834  RGAEKFDAKKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLYSE 655
            RGAEKFDA KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA+KQLYSE
Sbjct: 363  RGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSE 422

Query: 654  NGRHPDDEEVAEAAGLSMKRLSAVMLTPKTPRSLDQKIGLNQNLKPSEVIADPEAETSED 475
            NGRHP++EEVA+A GLSMKRL+AV+LTPK PRSLDQKIG+NQNLKPSE+IADPEAET+ED
Sbjct: 423  NGRHPNNEEVAKATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSEIIADPEAETTED 482

Query: 474  LLIK 463
            +L+K
Sbjct: 483  ILMK 486



 Score = 89.4 bits (220), Expect(2) = e-129
 Identities = 44/47 (93%), Positives = 46/47 (97%)
 Frame = -3

Query: 433 DGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKRRTKHLQQYLLS 293
           DGRMKTLQEIGELMGVSRERIRQIES AFRKLKNKRRTKHLQQY++S
Sbjct: 516 DGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKRRTKHLQQYVVS 562


>ref|XP_007029868.1| RNApolymerase sigma subunit 2 [Theobroma cacao]
            gi|508718473|gb|EOY10370.1| RNApolymerase sigma subunit 2
            [Theobroma cacao]
          Length = 623

 Score =  402 bits (1032), Expect(2) = e-129
 Identities = 203/252 (80%), Positives = 219/252 (86%), Gaps = 8/252 (3%)
 Frame = -1

Query: 1194 MQEIDYSDPXXXXXXXXXXXXXXTASEEHELSEGIQDLLKLETLHEQLVQRCGAEPTFAQ 1015
            +Q++DYSDP              TA+EE ELSEGIQDLLKLE L E+L +RCG +PTFAQ
Sbjct: 293  LQDVDYSDPLRYLRGTTSTSRLLTANEELELSEGIQDLLKLERLQEELAERCGGQPTFAQ 352

Query: 1014 WAAAAGVDQKTLRKRLNYGTICKDKMIKSNVRLVISIARNYQGAGMNLQDLVQEGCRGLV 835
            WAAAAGVDQKTLR RLNYG  CKDKMIKSN+RLVISIA+NYQGAGMNLQDLVQEGCRGLV
Sbjct: 353  WAAAAGVDQKTLRSRLNYGVHCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLV 412

Query: 834  RGAEKFDAKKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLYSE 655
            RGAEKFDA KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA+KQLYSE
Sbjct: 413  RGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSE 472

Query: 654  NGRHPDDEEVAEAAGLSMKRLSAVMLTPKTPRSLDQKIGLNQNLKPS--------EVIAD 499
            NGRHPD+EEVAEA GLSMKRL+AV+LTPK PRSLDQKIG+NQNLKPS        EVIAD
Sbjct: 473  NGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSVCPVSSLAEVIAD 532

Query: 498  PEAETSEDLLIK 463
            PEAET+ED+LIK
Sbjct: 533  PEAETAEDMLIK 544



 Score = 90.5 bits (223), Expect(2) = e-129
 Identities = 45/47 (95%), Positives = 46/47 (97%)
 Frame = -3

Query: 433 DGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKRRTKHLQQYLLS 293
           DGRMKTLQEIGELMGVSRERIRQIES AFRKLKNK+RTKHLQQYLLS
Sbjct: 574 DGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLLS 620


>ref|XP_010251515.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Nelumbo
            nucifera]
          Length = 584

 Score =  407 bits (1045), Expect(2) = e-129
 Identities = 200/244 (81%), Positives = 221/244 (90%)
 Frame = -1

Query: 1194 MQEIDYSDPXXXXXXXXXXXXXXTASEEHELSEGIQDLLKLETLHEQLVQRCGAEPTFAQ 1015
            +Q+IDYSDP              TA+EE ELSEGIQDLLKLE LHE+L +RCG +PTFAQ
Sbjct: 265  LQDIDYSDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKLEKLHEELAERCGGQPTFAQ 324

Query: 1014 WAAAAGVDQKTLRKRLNYGTICKDKMIKSNVRLVISIARNYQGAGMNLQDLVQEGCRGLV 835
            WAAAAGVDQKTLRKRLNYG +CKDKMIKSN+RLVISIA+NYQGAGMNLQDLVQEGCRGLV
Sbjct: 325  WAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLV 384

Query: 834  RGAEKFDAKKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLYSE 655
            +GAEKFDA KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EAKKQLYSE
Sbjct: 385  KGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAKKQLYSE 444

Query: 654  NGRHPDDEEVAEAAGLSMKRLSAVMLTPKTPRSLDQKIGLNQNLKPSEVIADPEAETSED 475
            NGRHPD+EEVAEA GLSMKRL+AV+LTPK P SLDQKIG+NQ++KPSE+IADP+AET+E+
Sbjct: 445  NGRHPDNEEVAEATGLSMKRLTAVLLTPKAPISLDQKIGMNQDMKPSEIIADPDAETAEE 504

Query: 474  LLIK 463
            LLIK
Sbjct: 505  LLIK 508



 Score = 85.5 bits (210), Expect(2) = e-129
 Identities = 42/46 (91%), Positives = 45/46 (97%)
 Frame = -3

Query: 433 DGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKRRTKHLQQYLL 296
           DGRMKTLQEIGELMGVSRERIRQIES AFRKLKNKRRTK+LQQY++
Sbjct: 538 DGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKRRTKNLQQYVI 583


>ref|XP_010251516.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X2 [Nelumbo
            nucifera]
          Length = 479

 Score =  407 bits (1045), Expect(2) = e-129
 Identities = 200/244 (81%), Positives = 221/244 (90%)
 Frame = -1

Query: 1194 MQEIDYSDPXXXXXXXXXXXXXXTASEEHELSEGIQDLLKLETLHEQLVQRCGAEPTFAQ 1015
            +Q+IDYSDP              TA+EE ELSEGIQDLLKLE LHE+L +RCG +PTFAQ
Sbjct: 160  LQDIDYSDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKLEKLHEELAERCGGQPTFAQ 219

Query: 1014 WAAAAGVDQKTLRKRLNYGTICKDKMIKSNVRLVISIARNYQGAGMNLQDLVQEGCRGLV 835
            WAAAAGVDQKTLRKRLNYG +CKDKMIKSN+RLVISIA+NYQGAGMNLQDLVQEGCRGLV
Sbjct: 220  WAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLV 279

Query: 834  RGAEKFDAKKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLYSE 655
            +GAEKFDA KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EAKKQLYSE
Sbjct: 280  KGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAKKQLYSE 339

Query: 654  NGRHPDDEEVAEAAGLSMKRLSAVMLTPKTPRSLDQKIGLNQNLKPSEVIADPEAETSED 475
            NGRHPD+EEVAEA GLSMKRL+AV+LTPK P SLDQKIG+NQ++KPSE+IADP+AET+E+
Sbjct: 340  NGRHPDNEEVAEATGLSMKRLTAVLLTPKAPISLDQKIGMNQDMKPSEIIADPDAETAEE 399

Query: 474  LLIK 463
            LLIK
Sbjct: 400  LLIK 403



 Score = 85.5 bits (210), Expect(2) = e-129
 Identities = 42/46 (91%), Positives = 45/46 (97%)
 Frame = -3

Query: 433 DGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKRRTKHLQQYLL 296
           DGRMKTLQEIGELMGVSRERIRQIES AFRKLKNKRRTK+LQQY++
Sbjct: 433 DGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKRRTKNLQQYVI 478


>ref|XP_009377635.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Pyrus x
            bretschneideri]
          Length = 643

 Score =  403 bits (1036), Expect(2) = e-129
 Identities = 200/244 (81%), Positives = 219/244 (89%)
 Frame = -1

Query: 1194 MQEIDYSDPXXXXXXXXXXXXXXTASEEHELSEGIQDLLKLETLHEQLVQRCGAEPTFAQ 1015
            +QEID+SDP              TA+EE E SEGIQ+LLKLE LHE+L QRCG +PT AQ
Sbjct: 324  VQEIDHSDPLRYLRSTTHTSRLLTANEEIEFSEGIQELLKLEKLHEELAQRCGGQPTIAQ 383

Query: 1014 WAAAAGVDQKTLRKRLNYGTICKDKMIKSNVRLVISIARNYQGAGMNLQDLVQEGCRGLV 835
            WAAAAGVDQKTLRKR+NYG +CKDKMIKSN+RLVISIA+NYQGAGMNLQDLVQEGCRGLV
Sbjct: 384  WAAAAGVDQKTLRKRVNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLV 443

Query: 834  RGAEKFDAKKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLYSE 655
            RGAEKFDA KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EAKKQLYS 
Sbjct: 444  RGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAKKQLYSL 503

Query: 654  NGRHPDDEEVAEAAGLSMKRLSAVMLTPKTPRSLDQKIGLNQNLKPSEVIADPEAETSED 475
            NGRHP+DEEVAEA GLSMKRLSAV+LTPK PRSL+QKIG+NQNLKPSEVI+DP+AET+ED
Sbjct: 504  NGRHPNDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVISDPDAETAED 563

Query: 474  LLIK 463
            LL+K
Sbjct: 564  LLMK 567



 Score = 88.2 bits (217), Expect(2) = e-129
 Identities = 43/47 (91%), Positives = 46/47 (97%)
 Frame = -3

Query: 433 DGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKRRTKHLQQYLLS 293
           DGRMKTLQEIGELMGVSRERIRQIES AFRKLKNK+RTKHLQQY++S
Sbjct: 597 DGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVVS 643


>ref|XP_009377636.1| PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Pyrus x
            bretschneideri]
          Length = 613

 Score =  403 bits (1036), Expect(2) = e-129
 Identities = 200/244 (81%), Positives = 219/244 (89%)
 Frame = -1

Query: 1194 MQEIDYSDPXXXXXXXXXXXXXXTASEEHELSEGIQDLLKLETLHEQLVQRCGAEPTFAQ 1015
            +QEID+SDP              TA+EE E SEGIQ+LLKLE LHE+L QRCG +PT AQ
Sbjct: 294  VQEIDHSDPLRYLRSTTHTSRLLTANEEIEFSEGIQELLKLEKLHEELAQRCGGQPTIAQ 353

Query: 1014 WAAAAGVDQKTLRKRLNYGTICKDKMIKSNVRLVISIARNYQGAGMNLQDLVQEGCRGLV 835
            WAAAAGVDQKTLRKR+NYG +CKDKMIKSN+RLVISIA+NYQGAGMNLQDLVQEGCRGLV
Sbjct: 354  WAAAAGVDQKTLRKRVNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLV 413

Query: 834  RGAEKFDAKKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLYSE 655
            RGAEKFDA KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EAKKQLYS 
Sbjct: 414  RGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAKKQLYSL 473

Query: 654  NGRHPDDEEVAEAAGLSMKRLSAVMLTPKTPRSLDQKIGLNQNLKPSEVIADPEAETSED 475
            NGRHP+DEEVAEA GLSMKRLSAV+LTPK PRSL+QKIG+NQNLKPSEVI+DP+AET+ED
Sbjct: 474  NGRHPNDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVISDPDAETAED 533

Query: 474  LLIK 463
            LL+K
Sbjct: 534  LLMK 537



 Score = 88.2 bits (217), Expect(2) = e-129
 Identities = 43/47 (91%), Positives = 46/47 (97%)
 Frame = -3

Query: 433 DGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKRRTKHLQQYLLS 293
           DGRMKTLQEIGELMGVSRERIRQIES AFRKLKNK+RTKHLQQY++S
Sbjct: 567 DGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVVS 613


>ref|XP_010052664.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Eucalyptus
            grandis]
          Length = 601

 Score =  403 bits (1036), Expect(2) = e-129
 Identities = 200/244 (81%), Positives = 216/244 (88%)
 Frame = -1

Query: 1194 MQEIDYSDPXXXXXXXXXXXXXXTASEEHELSEGIQDLLKLETLHEQLVQRCGAEPTFAQ 1015
            +QE+DYSDP              TA+EE ELSEGIQDLLKLE L  +L +RCG EP FAQ
Sbjct: 282  LQEVDYSDPLRYLRGTTSSSRLLTATEETELSEGIQDLLKLERLQVELTERCGGEPAFAQ 341

Query: 1014 WAAAAGVDQKTLRKRLNYGTICKDKMIKSNVRLVISIARNYQGAGMNLQDLVQEGCRGLV 835
            WAAAAGVDQKTLRKRLNYG +CKDKMIKSN+RLVISIA+NYQGAGMNLQDLVQEGCRGLV
Sbjct: 342  WAAAAGVDQKTLRKRLNYGRLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLV 401

Query: 834  RGAEKFDAKKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLYSE 655
            RG EKFDA KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA+KQLYSE
Sbjct: 402  RGCEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSE 461

Query: 654  NGRHPDDEEVAEAAGLSMKRLSAVMLTPKTPRSLDQKIGLNQNLKPSEVIADPEAETSED 475
            NGR PD+EEVAEA GLSMKRL+AV++TPK PRSLDQKIG+NQNLKPSEVIADP AETSED
Sbjct: 462  NGRQPDNEEVAEATGLSMKRLNAVLMTPKAPRSLDQKIGINQNLKPSEVIADPNAETSED 521

Query: 474  LLIK 463
            +L+K
Sbjct: 522  VLLK 525



 Score = 88.2 bits (217), Expect(2) = e-129
 Identities = 43/47 (91%), Positives = 46/47 (97%)
 Frame = -3

Query: 433 DGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKRRTKHLQQYLLS 293
           DGRMKTLQEIGELMGVSRERIRQIES AFRKLKNK+RTKHLQQY+L+
Sbjct: 555 DGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVLA 601


>ref|XP_010052665.1| PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Eucalyptus
            grandis] gi|629111779|gb|KCW76739.1| hypothetical protein
            EUGRSUZ_D01094 [Eucalyptus grandis]
          Length = 588

 Score =  403 bits (1036), Expect(2) = e-129
 Identities = 200/244 (81%), Positives = 216/244 (88%)
 Frame = -1

Query: 1194 MQEIDYSDPXXXXXXXXXXXXXXTASEEHELSEGIQDLLKLETLHEQLVQRCGAEPTFAQ 1015
            +QE+DYSDP              TA+EE ELSEGIQDLLKLE L  +L +RCG EP FAQ
Sbjct: 269  LQEVDYSDPLRYLRGTTSSSRLLTATEETELSEGIQDLLKLERLQVELTERCGGEPAFAQ 328

Query: 1014 WAAAAGVDQKTLRKRLNYGTICKDKMIKSNVRLVISIARNYQGAGMNLQDLVQEGCRGLV 835
            WAAAAGVDQKTLRKRLNYG +CKDKMIKSN+RLVISIA+NYQGAGMNLQDLVQEGCRGLV
Sbjct: 329  WAAAAGVDQKTLRKRLNYGRLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLV 388

Query: 834  RGAEKFDAKKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLYSE 655
            RG EKFDA KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA+KQLYSE
Sbjct: 389  RGCEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSE 448

Query: 654  NGRHPDDEEVAEAAGLSMKRLSAVMLTPKTPRSLDQKIGLNQNLKPSEVIADPEAETSED 475
            NGR PD+EEVAEA GLSMKRL+AV++TPK PRSLDQKIG+NQNLKPSEVIADP AETSED
Sbjct: 449  NGRQPDNEEVAEATGLSMKRLNAVLMTPKAPRSLDQKIGINQNLKPSEVIADPNAETSED 508

Query: 474  LLIK 463
            +L+K
Sbjct: 509  VLLK 512



 Score = 88.2 bits (217), Expect(2) = e-129
 Identities = 43/47 (91%), Positives = 46/47 (97%)
 Frame = -3

Query: 433 DGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKRRTKHLQQYLLS 293
           DGRMKTLQEIGELMGVSRERIRQIES AFRKLKNK+RTKHLQQY+L+
Sbjct: 542 DGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVLA 588


>ref|XP_008460092.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Cucumis melo]
          Length = 580

 Score =  402 bits (1032), Expect(2) = e-129
 Identities = 199/244 (81%), Positives = 220/244 (90%)
 Frame = -1

Query: 1194 MQEIDYSDPXXXXXXXXXXXXXXTASEEHELSEGIQDLLKLETLHEQLVQRCGAEPTFAQ 1015
            +QE+DYSDP              TA+EE ELSEGIQDLLKLE L E+L +R G EPTFAQ
Sbjct: 261  LQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQ 320

Query: 1014 WAAAAGVDQKTLRKRLNYGTICKDKMIKSNVRLVISIARNYQGAGMNLQDLVQEGCRGLV 835
            WAAAAGV+Q+TLRKRLNYGT+CKDKMIKSN+RLVISIA+NYQGAGMNLQDLVQEGCRGLV
Sbjct: 321  WAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLV 380

Query: 834  RGAEKFDAKKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLYSE 655
            RGAEKFDA KGFKFSTYAHWWIKQAVRK LSDQSRTIRLPFHMVEATYRVKEA+KQL SE
Sbjct: 381  RGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSE 440

Query: 654  NGRHPDDEEVAEAAGLSMKRLSAVMLTPKTPRSLDQKIGLNQNLKPSEVIADPEAETSED 475
            NGRHPDD+E+AEAAGLSMKRL+AV++TPK PRSL+QKIG+NQNLKPSEVI+DPEAET+ED
Sbjct: 441  NGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED 500

Query: 474  LLIK 463
            +LIK
Sbjct: 501  MLIK 504



 Score = 89.0 bits (219), Expect(2) = e-129
 Identities = 43/47 (91%), Positives = 46/47 (97%)
 Frame = -3

Query: 433 DGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKRRTKHLQQYLLS 293
           DGRMKTLQEIGE+MGVSRERIRQIES AFRKLKNK+RTKHLQQYL+S
Sbjct: 534 DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS 580


>ref|XP_008460093.1| PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Cucumis melo]
          Length = 563

 Score =  402 bits (1032), Expect(2) = e-129
 Identities = 199/244 (81%), Positives = 220/244 (90%)
 Frame = -1

Query: 1194 MQEIDYSDPXXXXXXXXXXXXXXTASEEHELSEGIQDLLKLETLHEQLVQRCGAEPTFAQ 1015
            +QE+DYSDP              TA+EE ELSEGIQDLLKLE L E+L +R G EPTFAQ
Sbjct: 244  LQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQ 303

Query: 1014 WAAAAGVDQKTLRKRLNYGTICKDKMIKSNVRLVISIARNYQGAGMNLQDLVQEGCRGLV 835
            WAAAAGV+Q+TLRKRLNYGT+CKDKMIKSN+RLVISIA+NYQGAGMNLQDLVQEGCRGLV
Sbjct: 304  WAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLV 363

Query: 834  RGAEKFDAKKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLYSE 655
            RGAEKFDA KGFKFSTYAHWWIKQAVRK LSDQSRTIRLPFHMVEATYRVKEA+KQL SE
Sbjct: 364  RGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSE 423

Query: 654  NGRHPDDEEVAEAAGLSMKRLSAVMLTPKTPRSLDQKIGLNQNLKPSEVIADPEAETSED 475
            NGRHPDD+E+AEAAGLSMKRL+AV++TPK PRSL+QKIG+NQNLKPSEVI+DPEAET+ED
Sbjct: 424  NGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED 483

Query: 474  LLIK 463
            +LIK
Sbjct: 484  MLIK 487



 Score = 89.0 bits (219), Expect(2) = e-129
 Identities = 43/47 (91%), Positives = 46/47 (97%)
 Frame = -3

Query: 433 DGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKRRTKHLQQYLLS 293
           DGRMKTLQEIGE+MGVSRERIRQIES AFRKLKNK+RTKHLQQYL+S
Sbjct: 517 DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS 563


>ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB [Fragaria vesca subsp.
            vesca]
          Length = 616

 Score =  401 bits (1030), Expect(2) = e-129
 Identities = 198/244 (81%), Positives = 219/244 (89%)
 Frame = -1

Query: 1194 MQEIDYSDPXXXXXXXXXXXXXXTASEEHELSEGIQDLLKLETLHEQLVQRCGAEPTFAQ 1015
            +Q++D+SDP              TA+EE ELSEGIQ+LLKLE L E L QRCG +PTFAQ
Sbjct: 297  LQDVDHSDPLRYLRATTHTSRLLTANEEIELSEGIQELLKLEKLQEDLAQRCGTQPTFAQ 356

Query: 1014 WAAAAGVDQKTLRKRLNYGTICKDKMIKSNVRLVISIARNYQGAGMNLQDLVQEGCRGLV 835
            WAAAAGVDQKTLRKR+NYG +CKDKMIKSN+RLVISIA+NYQGAGMNLQDLVQEGCRGLV
Sbjct: 357  WAAAAGVDQKTLRKRVNYGIMCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLV 416

Query: 834  RGAEKFDAKKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLYSE 655
            RGAEKFDA KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EAKKQLYS 
Sbjct: 417  RGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAKKQLYSV 476

Query: 654  NGRHPDDEEVAEAAGLSMKRLSAVMLTPKTPRSLDQKIGLNQNLKPSEVIADPEAETSED 475
            NGRHP+DEEVAEA GLSMKRL+AV+LTPK PRSL+QKIG+NQNLKPS+VIADP+AET+ED
Sbjct: 477  NGRHPNDEEVAEATGLSMKRLAAVLLTPKAPRSLEQKIGINQNLKPSDVIADPDAETAED 536

Query: 474  LLIK 463
            LL+K
Sbjct: 537  LLMK 540



 Score = 89.4 bits (220), Expect(2) = e-129
 Identities = 44/47 (93%), Positives = 46/47 (97%)
 Frame = -3

Query: 433 DGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKRRTKHLQQYLLS 293
           DGRMKTLQEIGELMGVSRERIRQIES AFRKLKNK+RTKHLQQY+LS
Sbjct: 570 DGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVLS 616


>ref|XP_007203880.1| hypothetical protein PRUPE_ppa006657mg [Prunus persica]
            gi|462399411|gb|EMJ05079.1| hypothetical protein
            PRUPE_ppa006657mg [Prunus persica]
          Length = 401

 Score =  402 bits (1033), Expect(2) = e-129
 Identities = 198/244 (81%), Positives = 220/244 (90%)
 Frame = -1

Query: 1194 MQEIDYSDPXXXXXXXXXXXXXXTASEEHELSEGIQDLLKLETLHEQLVQRCGAEPTFAQ 1015
            +Q++D+SDP              TA+EE ELSEGIQ+LLKLE L E+LVQRCG +PT AQ
Sbjct: 82   LQDVDHSDPLRYLRATTHTSRLLTANEEIELSEGIQELLKLEKLQEELVQRCGGQPTIAQ 141

Query: 1014 WAAAAGVDQKTLRKRLNYGTICKDKMIKSNVRLVISIARNYQGAGMNLQDLVQEGCRGLV 835
            WAAAAGVDQKTLRKR+NYG +CKDKMIKSN+RLVISIA+NYQGAGMNLQDLVQ+GCRGLV
Sbjct: 142  WAAAAGVDQKTLRKRINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQQGCRGLV 201

Query: 834  RGAEKFDAKKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLYSE 655
            RGAEKFDA KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EAKKQLYS 
Sbjct: 202  RGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAKKQLYSV 261

Query: 654  NGRHPDDEEVAEAAGLSMKRLSAVMLTPKTPRSLDQKIGLNQNLKPSEVIADPEAETSED 475
            NGRHP+DEEVAEA GLSMKRL+AV+LTPK PRSL+QKIG+NQNLKPSEVIADPEAET+ED
Sbjct: 262  NGRHPNDEEVAEATGLSMKRLAAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAED 321

Query: 474  LLIK 463
            +L+K
Sbjct: 322  MLMK 325



 Score = 88.2 bits (217), Expect(2) = e-129
 Identities = 43/47 (91%), Positives = 46/47 (97%)
 Frame = -3

Query: 433 DGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKRRTKHLQQYLLS 293
           DGRMKTLQEIGELMGVSRERIRQIES AFRKLKNK+RTKHLQQY++S
Sbjct: 355 DGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVVS 401


>ref|XP_010278441.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nelumbo nucifera]
          Length = 572

 Score =  403 bits (1035), Expect(2) = e-128
 Identities = 198/244 (81%), Positives = 220/244 (90%)
 Frame = -1

Query: 1194 MQEIDYSDPXXXXXXXXXXXXXXTASEEHELSEGIQDLLKLETLHEQLVQRCGAEPTFAQ 1015
            +Q++DYSDP              TA+EE E SEGIQDLLKLE L+E+L +R G +PTFAQ
Sbjct: 253  LQDVDYSDPLRYLRGTTSTSRLLTATEELEFSEGIQDLLKLEKLYEELAERYGGQPTFAQ 312

Query: 1014 WAAAAGVDQKTLRKRLNYGTICKDKMIKSNVRLVISIARNYQGAGMNLQDLVQEGCRGLV 835
            WAAAAG+DQKTLRKRLNYG +CKDKMIKSN+RLVISIA+NYQGAGMNLQDLVQEGCRGLV
Sbjct: 313  WAAAAGIDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLV 372

Query: 834  RGAEKFDAKKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLYSE 655
            RGAEKFDA KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EA+KQLYSE
Sbjct: 373  RGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREARKQLYSE 432

Query: 654  NGRHPDDEEVAEAAGLSMKRLSAVMLTPKTPRSLDQKIGLNQNLKPSEVIADPEAETSED 475
            NGRHPD+EEVAEA GLSMKRL+AV+LTPK PRSLDQKIG+NQNLKPSEVIADP+AET+E+
Sbjct: 433  NGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSEVIADPDAETTEE 492

Query: 474  LLIK 463
            LL+K
Sbjct: 493  LLMK 496



 Score = 87.0 bits (214), Expect(2) = e-128
 Identities = 43/47 (91%), Positives = 46/47 (97%)
 Frame = -3

Query: 433 DGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKRRTKHLQQYLLS 293
           DGRMKTLQEIGELMGVSRERIRQIES AFRKLKNK+RTK+LQQYL+S
Sbjct: 526 DGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKNLQQYLIS 572


>ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative [Ricinus communis]
            gi|223536699|gb|EEF38340.1| RNA polymerase sigma factor
            rpoD1, putative [Ricinus communis]
          Length = 569

 Score =  404 bits (1038), Expect(2) = e-128
 Identities = 202/244 (82%), Positives = 219/244 (89%)
 Frame = -1

Query: 1194 MQEIDYSDPXXXXXXXXXXXXXXTASEEHELSEGIQDLLKLETLHEQLVQRCGAEPTFAQ 1015
            +QE+DYSDP              TASEE ELS  IQDLLKLE L E+L +R G +PTFAQ
Sbjct: 250  LQEVDYSDPLRYLRGTTSTSRLLTASEELELSAAIQDLLKLERLQEELAERYGGQPTFAQ 309

Query: 1014 WAAAAGVDQKTLRKRLNYGTICKDKMIKSNVRLVISIARNYQGAGMNLQDLVQEGCRGLV 835
            WAAAAGVDQ+TLRKR+N+GTICKDKMIKSN+RLVISIA+NYQGAGMNLQDLVQEGCRGLV
Sbjct: 310  WAAAAGVDQRTLRKRINHGTICKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLV 369

Query: 834  RGAEKFDAKKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLYSE 655
            RGAEKFDA KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA+KQLYSE
Sbjct: 370  RGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSE 429

Query: 654  NGRHPDDEEVAEAAGLSMKRLSAVMLTPKTPRSLDQKIGLNQNLKPSEVIADPEAETSED 475
            NGRHPDDEEVAEAAGLSMKRLSAV+LTPK PRSLDQKIG+N +LKPSEVIADPEAET+E+
Sbjct: 430  NGRHPDDEEVAEAAGLSMKRLSAVLLTPKAPRSLDQKIGMNMDLKPSEVIADPEAETAEE 489

Query: 474  LLIK 463
            LL+K
Sbjct: 490  LLMK 493



 Score = 85.9 bits (211), Expect(2) = e-128
 Identities = 42/47 (89%), Positives = 46/47 (97%)
 Frame = -3

Query: 433 DGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKRRTKHLQQYLLS 293
           DGRMKTLQEIGE+MGVSRERIRQIESSAFRKLKNK+RTK L+QYLL+
Sbjct: 523 DGRMKTLQEIGEIMGVSRERIRQIESSAFRKLKNKKRTKQLKQYLLA 569


>ref|XP_008240611.1| PREDICTED: RNA polymerase sigma factor sigB [Prunus mume]
          Length = 643

 Score =  401 bits (1030), Expect(2) = e-128
 Identities = 197/244 (80%), Positives = 220/244 (90%)
 Frame = -1

Query: 1194 MQEIDYSDPXXXXXXXXXXXXXXTASEEHELSEGIQDLLKLETLHEQLVQRCGAEPTFAQ 1015
            +Q++D+SDP              TA+EE ELSEGIQ+LLKLE L E+LVQRCG +PT AQ
Sbjct: 324  LQDVDHSDPLRYLRATTHTSRLLTANEEIELSEGIQELLKLEKLQEELVQRCGGQPTIAQ 383

Query: 1014 WAAAAGVDQKTLRKRLNYGTICKDKMIKSNVRLVISIARNYQGAGMNLQDLVQEGCRGLV 835
            WAAAAGVDQKTLRKR+NYG +CKDKMIKSN+RLVISIA+NYQGAGMNLQDLVQ+GCRGLV
Sbjct: 384  WAAAAGVDQKTLRKRINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQQGCRGLV 443

Query: 834  RGAEKFDAKKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLYSE 655
            RGAEKFDA KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EAKKQLYS 
Sbjct: 444  RGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAKKQLYSV 503

Query: 654  NGRHPDDEEVAEAAGLSMKRLSAVMLTPKTPRSLDQKIGLNQNLKPSEVIADPEAETSED 475
            NGRHP+DEEVAEA GLSMKRL+AV+LTPK PRSL+QKIG+NQNLKPSEVIADP+AET+ED
Sbjct: 504  NGRHPNDEEVAEATGLSMKRLAAVLLTPKAPRSLEQKIGINQNLKPSEVIADPDAETAED 563

Query: 474  LLIK 463
            +L+K
Sbjct: 564  MLMK 567



 Score = 88.2 bits (217), Expect(2) = e-128
 Identities = 43/47 (91%), Positives = 46/47 (97%)
 Frame = -3

Query: 433 DGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKRRTKHLQQYLLS 293
           DGRMKTLQEIGELMGVSRERIRQIES AFRKLKNK+RTKHLQQY++S
Sbjct: 597 DGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVVS 643


>ref|XP_011086680.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Sesamum
            indicum]
          Length = 613

 Score =  400 bits (1027), Expect(2) = e-128
 Identities = 201/244 (82%), Positives = 216/244 (88%)
 Frame = -1

Query: 1194 MQEIDYSDPXXXXXXXXXXXXXXTASEEHELSEGIQDLLKLETLHEQLVQRCGAEPTFAQ 1015
            +Q++DYSDP              TASEE  LS GIQ LLKLE L  +L QR G +PTFAQ
Sbjct: 294  VQDVDYSDPLRYLRGTTSSSRLLTASEEQVLSSGIQVLLKLERLQMELTQRYGGQPTFAQ 353

Query: 1014 WAAAAGVDQKTLRKRLNYGTICKDKMIKSNVRLVISIARNYQGAGMNLQDLVQEGCRGLV 835
            WAAAAGVDQKTLRK++NYG +CKDKMIKSN+RLVISIA+NYQGAGMNLQDLVQEGCRGLV
Sbjct: 354  WAAAAGVDQKTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLV 413

Query: 834  RGAEKFDAKKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLYSE 655
            RGAEKFDA KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA+KQLYSE
Sbjct: 414  RGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSE 473

Query: 654  NGRHPDDEEVAEAAGLSMKRLSAVMLTPKTPRSLDQKIGLNQNLKPSEVIADPEAETSED 475
            NGRHPDDEEVAEA GLSMKRLSAVMLTPK PRSLDQKIG+NQ+LKPS+VIADPEAET+ED
Sbjct: 474  NGRHPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETAED 533

Query: 474  LLIK 463
            LLIK
Sbjct: 534  LLIK 537



 Score = 87.0 bits (214), Expect(2) = e-128
 Identities = 42/46 (91%), Positives = 45/46 (97%)
 Frame = -3

Query: 433 DGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKRRTKHLQQYLL 296
           DGRMKTLQEIGELMGVSRERIRQIES AFRKLKNK+RTKHLQQY++
Sbjct: 567 DGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 612


>gb|KHG18437.1| RNA polymerase sigma factor rpoD [Gossypium arboreum]
          Length = 578

 Score =  400 bits (1027), Expect(2) = e-128
 Identities = 198/244 (81%), Positives = 218/244 (89%)
 Frame = -1

Query: 1194 MQEIDYSDPXXXXXXXXXXXXXXTASEEHELSEGIQDLLKLETLHEQLVQRCGAEPTFAQ 1015
            +Q+IDYSDP              TA+EE ELSEGIQDLLKLE LHE+L +RCG  PTFAQ
Sbjct: 256  LQDIDYSDPLRYLRGTTNTSKLLTANEELELSEGIQDLLKLEVLHEELAERCGRPPTFAQ 315

Query: 1014 WAAAAGVDQKTLRKRLNYGTICKDKMIKSNVRLVISIARNYQGAGMNLQDLVQEGCRGLV 835
            WAAAA VD+KTLR+RLNYGTICKDKMIKSN+RLVISIA+NYQGAGMNLQDLVQEGCRGL+
Sbjct: 316  WAAAAEVDRKTLRERLNYGTICKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLI 375

Query: 834  RGAEKFDAKKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLYSE 655
            RGAEKFDA KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA+KQLYSE
Sbjct: 376  RGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSE 435

Query: 654  NGRHPDDEEVAEAAGLSMKRLSAVMLTPKTPRSLDQKIGLNQNLKPSEVIADPEAETSED 475
            NGR PD+ EVAEA GLSMKRL+AV+L PK PRSLDQKIG+NQNLKPSEVIADPEA+++ED
Sbjct: 436  NGRQPDNIEVAEATGLSMKRLTAVLLAPKAPRSLDQKIGINQNLKPSEVIADPEADSAED 495

Query: 474  LLIK 463
            +L+K
Sbjct: 496  ILLK 499



 Score = 87.0 bits (214), Expect(2) = e-128
 Identities = 44/47 (93%), Positives = 44/47 (93%)
 Frame = -3

Query: 433 DGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKRRTKHLQQYLLS 293
           DGRMKTLQEIGE MGVSRERIRQIE  AFRKLKNKRRTKHLQQYLLS
Sbjct: 529 DGRMKTLQEIGESMGVSRERIRQIELCAFRKLKNKRRTKHLQQYLLS 575


>ref|XP_010097670.1| RNA polymerase sigma factor rpoD [Morus notabilis]
            gi|587881690|gb|EXB70625.1| RNA polymerase sigma factor
            rpoD [Morus notabilis]
          Length = 574

 Score =  397 bits (1019), Expect(2) = e-127
 Identities = 196/244 (80%), Positives = 217/244 (88%)
 Frame = -1

Query: 1194 MQEIDYSDPXXXXXXXXXXXXXXTASEEHELSEGIQDLLKLETLHEQLVQRCGAEPTFAQ 1015
            +Q++D+SDP              TA+EE ELSEGIQDLLKLE L E+L +RCG  PTFAQ
Sbjct: 254  VQDVDHSDPLRYLRSTTSTSRLLTATEEIELSEGIQDLLKLEKLQEELAERCGGPPTFAQ 313

Query: 1014 WAAAAGVDQKTLRKRLNYGTICKDKMIKSNVRLVISIARNYQGAGMNLQDLVQEGCRGLV 835
            WAAAAGVDQKTLR+R+NYG +CKDKMIKSNVRLVISIA+NYQGAGMNLQDLVQEGCRGLV
Sbjct: 314  WAAAAGVDQKTLRRRINYGILCKDKMIKSNVRLVISIAKNYQGAGMNLQDLVQEGCRGLV 373

Query: 834  RGAEKFDAKKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLYSE 655
            RGAEKFDA KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA+KQLYSE
Sbjct: 374  RGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSE 433

Query: 654  NGRHPDDEEVAEAAGLSMKRLSAVMLTPKTPRSLDQKIGLNQNLKPSEVIADPEAETSED 475
            NGR P+DEEVAEA GLSMKRL+AV+LTPK PRSL+QKIG+NQNLKPSE+IADP+AET ED
Sbjct: 434  NGRQPNDEEVAEATGLSMKRLAAVLLTPKAPRSLEQKIGINQNLKPSEIIADPDAETLED 493

Query: 474  LLIK 463
            +L +
Sbjct: 494  VLTR 497



 Score = 89.7 bits (221), Expect(2) = e-127
 Identities = 44/47 (93%), Positives = 46/47 (97%)
 Frame = -3

Query: 433 DGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKRRTKHLQQYLLS 293
           DGRMKTLQEIGELMGVSRERIRQIES AFRKLKNK+RTKHLQQYL+S
Sbjct: 527 DGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLIS 573


>ref|XP_009792606.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nicotiana
            sylvestris]
          Length = 588

 Score =  402 bits (1034), Expect(2) = e-127
 Identities = 199/244 (81%), Positives = 216/244 (88%)
 Frame = -1

Query: 1194 MQEIDYSDPXXXXXXXXXXXXXXTASEEHELSEGIQDLLKLETLHEQLVQRCGAEPTFAQ 1015
            +Q++DYSDP              TASEEH+LSEGIQ+LLKLE L E+L +RCG +PT AQ
Sbjct: 269  VQDVDYSDPLRYLRGTTSTSRLLTASEEHKLSEGIQELLKLERLQEELAERCGGQPTSAQ 328

Query: 1014 WAAAAGVDQKTLRKRLNYGTICKDKMIKSNVRLVISIARNYQGAGMNLQDLVQEGCRGLV 835
            WAAAAGVD KTLRK +NYG +CKDKMIKSN+RLVISIA+NYQGAGMNLQDLVQEGCRGLV
Sbjct: 329  WAAAAGVDLKTLRKHINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLV 388

Query: 834  RGAEKFDAKKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLYSE 655
            RGAEKFDA KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA+KQLYSE
Sbjct: 389  RGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSE 448

Query: 654  NGRHPDDEEVAEAAGLSMKRLSAVMLTPKTPRSLDQKIGLNQNLKPSEVIADPEAETSED 475
            NGRHPD+EE+AEA GLSMKRL+A MLTPK PRSLDQKIG NQNLKPSEVIADPEAETSE+
Sbjct: 449  NGRHPDEEELAEATGLSMKRLTAAMLTPKAPRSLDQKIGFNQNLKPSEVIADPEAETSEE 508

Query: 474  LLIK 463
             LIK
Sbjct: 509  TLIK 512



 Score = 83.6 bits (205), Expect(2) = e-127
 Identities = 41/45 (91%), Positives = 44/45 (97%)
 Frame = -3

Query: 433 DGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKRRTKHLQQYL 299
           DGRMKTLQEIGELM VSRERIRQIESSAFRKLKNK+RTK+LQQY+
Sbjct: 542 DGRMKTLQEIGELMSVSRERIRQIESSAFRKLKNKKRTKNLQQYI 586