BLASTX nr result

ID: Gardenia21_contig00003239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00003239
         (289 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP18174.1| unnamed protein product [Coffea canephora]            134   3e-29
ref|XP_012089891.1| PREDICTED: cleavage stimulating factor 64 is...    60   5e-07
ref|XP_012089890.1| PREDICTED: cleavage stimulating factor 64 is...    60   5e-07

>emb|CDP18174.1| unnamed protein product [Coffea canephora]
          Length = 534

 Score =  134 bits (336), Expect = 3e-29
 Identities = 68/81 (83%), Positives = 71/81 (87%)
 Frame = -2

Query: 243 IQDIINKDPRRQVVISRVNDSLDRTNHPSKLVRLNDGRSIPSPTGENMATSASGPSQTFS 64
           IQD INKDPR QV+ISRVNDSLD TN PSKLVRLNDGR +PSPT ENMATSASGPSQTFS
Sbjct: 409 IQDSINKDPRGQVMISRVNDSLDPTNQPSKLVRLNDGRPVPSPTDENMATSASGPSQTFS 468

Query: 63  MSANPVPKVEEASVSENQAAQ 1
           M+ N VPKVEEASVSE QA Q
Sbjct: 469 MTTNQVPKVEEASVSEKQAVQ 489


>ref|XP_012089891.1| PREDICTED: cleavage stimulating factor 64 isoform X2 [Jatropha
           curcas]
          Length = 540

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
 Frame = -2

Query: 207 VVISRVNDSLDRTNHPSKLVRLNDGRSIPSPTGENMATSA--SGPSQTFSMSANPVPKVE 34
           V  + VNDS +  + PSKL++++DGRS+   +G    + A  SGPSQ F++ ANP PK E
Sbjct: 421 VQTNEVNDSKEPVSRPSKLLKMDDGRSVSFSSGALDVSKATTSGPSQAFTVPANPPPKSE 480

Query: 33  EASVSENQAAQ 1
           E   SE Q +Q
Sbjct: 481 ELKYSEKQVSQ 491


>ref|XP_012089890.1| PREDICTED: cleavage stimulating factor 64 isoform X1 [Jatropha
           curcas] gi|643706789|gb|KDP22708.1| hypothetical protein
           JCGZ_01932 [Jatropha curcas]
          Length = 554

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
 Frame = -2

Query: 207 VVISRVNDSLDRTNHPSKLVRLNDGRSIPSPTGENMATSA--SGPSQTFSMSANPVPKVE 34
           V  + VNDS +  + PSKL++++DGRS+   +G    + A  SGPSQ F++ ANP PK E
Sbjct: 435 VQTNEVNDSKEPVSRPSKLLKMDDGRSVSFSSGALDVSKATTSGPSQAFTVPANPPPKSE 494

Query: 33  EASVSENQAAQ 1
           E   SE Q +Q
Sbjct: 495 ELKYSEKQVSQ 505


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