BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00001431
         (1382 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABZ89185.1| putative protein [Coffea canephora]                    599   e-168
gb|ADZ55303.1| hypothetical protein MA17P03.10 [Coffea arabica]       599   e-168
gb|ADY38792.1| hypothetical protein MA29G21.11 [Coffea arabica]       593   e-167
ref|XP_009764918.1| PREDICTED: rubisco accumulation factor 2, ch...   433   e-118
ref|XP_006350959.1| PREDICTED: rubisco accumulation factor 1, ch...   430   e-117
ref|XP_009623604.1| PREDICTED: rubisco accumulation factor 2, ch...   425   e-116
ref|XP_004249913.1| PREDICTED: rubisco accumulation factor 1, ch...   424   e-116
ref|XP_008462710.1| PREDICTED: rubisco accumulation factor 1, ch...   405   e-110
ref|XP_007205174.1| hypothetical protein PRUPE_ppa005554mg [Prun...   404   e-109
ref|XP_011077232.1| PREDICTED: rubisco accumulation factor 1, ch...   404   e-109
ref|XP_008218310.1| PREDICTED: rubisco accumulation factor 1, ch...   404   e-109
ref|XP_004142574.1| PREDICTED: rubisco accumulation factor 1, ch...   403   e-109
ref|XP_006487727.1| PREDICTED: rubisco accumulation factor 1, ch...   396   e-107
ref|XP_002521962.1| conserved hypothetical protein [Ricinus comm...   395   e-107
ref|XP_008370732.1| PREDICTED: rubisco accumulation factor 1, ch...   392   e-106
ref|XP_012858338.1| PREDICTED: rubisco accumulation factor 1, ch...   392   e-106
ref|XP_011038528.1| PREDICTED: rubisco accumulation factor 1, ch...   391   e-106
ref|XP_012463925.1| PREDICTED: rubisco accumulation factor 1, ch...   390   e-105
gb|KJB80888.1| hypothetical protein B456_013G120100 [Gossypium r...   390   e-105
ref|XP_002268548.1| PREDICTED: rubisco accumulation factor 1, ch...   389   e-105

>gb|ABZ89185.1| putative protein [Coffea canephora]
          Length = 451

 Score =  599 bits (1544), Expect = e-168
 Identities = 320/449 (71%), Positives = 346/449 (77%), Gaps = 8/449 (1%)
 Frame = -1

Query: 1382 NTAKPLSLSTPFLPSHSFXXXXXXXXXXXXXPHSKRPNSIVALIIPPKSTA-QLQQVYQX 1206
            NTAKPLSLSTPFLPS                P SK PNS+VALIIPPKS+A Q QQ+YQ 
Sbjct: 8    NTAKPLSLSTPFLPS-----LLNPHKLLPPLPRSKHPNSVVALIIPPKSSAAQQQQLYQP 62

Query: 1205 XXXXXXXXXPQYRNLDTNGRLEILSNRLGLWFEYAPLVSSLLQEGFTPATLEEITGIXXX 1026
                     PQYRNLDTNGRLEILSNRLG WFEYAPL+S+L QEGFTP TLEEITGI   
Sbjct: 63   FRPPPSPLPPQYRNLDTNGRLEILSNRLGPWFEYAPLISALFQEGFTPPTLEEITGISGV 122

Query: 1025 XXXXXXXXXX-------SEVDPDILSFFDTSGAELLYEIXXXXXXXXXXXAEYIVLNRFD 867
                             SE+DPDILSFFDT GAELLYEI           A+Y+VLN+FD
Sbjct: 123  EQNRLVVAAQVRESLVQSEIDPDILSFFDTGGAELLYEIRLLSASQRASAAKYLVLNKFD 182

Query: 866  AKMSLELARAMKDKPRRRGDKGWESFDDDLPGDCLAFVYFRLAQEHTTASSPEMRRIALE 687
            A+M+LELARA+KDKPRR+G+KGWESFD DLPGDCLAF+YFR AQEH TASSPE+ R ALE
Sbjct: 183  ARMTLELARAIKDKPRRKGEKGWESFDGDLPGDCLAFMYFRQAQEHRTASSPELWRSALE 242

Query: 686  RALLAVESENGRKRVXXXXXXXXXXXXXXXXGPAADEVIVPVVRMQTGEVAESSVVAVLP 507
            RAL AVESENGR+RV                G AAD V+VPVVRMQTGEVAESSVVAVLP
Sbjct: 243  RALQAVESENGRERVLEELEGKKDGEDKDKEGAAADRVVVPVVRMQTGEVAESSVVAVLP 302

Query: 506  VCRAQXXXXXXXEAPWECAGVGDFGVVEAEKGWSRWVVLPGWKPLAGLKRGGVAVAFKSA 327
            VCRA+       EAPWECAGVGDFGVVEAEKGW RWVVLPGW+P+AGLKRGGVAVAFK+A
Sbjct: 303  VCRAEEREVEVEEAPWECAGVGDFGVVEAEKGWGRWVVLPGWEPVAGLKRGGVAVAFKNA 362

Query: 326  RVLPWRGNKWSREETILVVADRGRKEVVTDDNFYLVVGGGNGSAQEGLKVEKGLELKEIG 147
            RVLP R  KW+REE ILVVADRGRKEVVTDDNFYLVVGGGNGS +EGLKVE+GLELKEIG
Sbjct: 363  RVLPGRAKKWNREEAILVVADRGRKEVVTDDNFYLVVGGGNGSVEEGLKVERGLELKEIG 422

Query: 146  VKESLGTVVLVVRPPREDYDDHLSDEDWE 60
            VKESLGTVVLVVRPPRE+YDD LSDEDWE
Sbjct: 423  VKESLGTVVLVVRPPREEYDDQLSDEDWE 451


>gb|ADZ55303.1| hypothetical protein MA17P03.10 [Coffea arabica]
          Length = 451

 Score =  599 bits (1544), Expect = e-168
 Identities = 320/449 (71%), Positives = 346/449 (77%), Gaps = 8/449 (1%)
 Frame = -1

Query: 1382 NTAKPLSLSTPFLPSHSFXXXXXXXXXXXXXPHSKRPNSIVALIIPPKSTA-QLQQVYQX 1206
            NTAKPLSLSTPFLPS                P SK PNS+VALIIPPKS+A Q QQ+YQ 
Sbjct: 8    NTAKPLSLSTPFLPS-----LLNPHKLLPPLPRSKHPNSVVALIIPPKSSAAQQQQLYQP 62

Query: 1205 XXXXXXXXXPQYRNLDTNGRLEILSNRLGLWFEYAPLVSSLLQEGFTPATLEEITGIXXX 1026
                     PQYRNLDTNGRLEILSNRLG WFEYAPL+S+L QEGFTP TLEEITGI   
Sbjct: 63   FRPPPSPLPPQYRNLDTNGRLEILSNRLGPWFEYAPLISALFQEGFTPPTLEEITGISGV 122

Query: 1025 XXXXXXXXXX-------SEVDPDILSFFDTSGAELLYEIXXXXXXXXXXXAEYIVLNRFD 867
                             SE+DPDILSFFDT GAELLYEI           A+Y+VLN+FD
Sbjct: 123  EQNRLVVAAQVRESLVQSEIDPDILSFFDTGGAELLYEIRLLSASQRASAAKYLVLNKFD 182

Query: 866  AKMSLELARAMKDKPRRRGDKGWESFDDDLPGDCLAFVYFRLAQEHTTASSPEMRRIALE 687
            A+M+LELARA+KDKPRR+G+KGWESFD DLPGDCLAF+YFR AQEH TASSPE+ R ALE
Sbjct: 183  ARMTLELARAIKDKPRRKGEKGWESFDGDLPGDCLAFMYFRQAQEHRTASSPELWRSALE 242

Query: 686  RALLAVESENGRKRVXXXXXXXXXXXXXXXXGPAADEVIVPVVRMQTGEVAESSVVAVLP 507
            RAL AVESENGR+RV                G AAD V+VPVVRMQTGEVAESSVVAVLP
Sbjct: 243  RALQAVESENGRERVLEELEGEKDGEDKDKEGAAADRVVVPVVRMQTGEVAESSVVAVLP 302

Query: 506  VCRAQXXXXXXXEAPWECAGVGDFGVVEAEKGWSRWVVLPGWKPLAGLKRGGVAVAFKSA 327
            VCRA+       EAPWECAGVGDFGVVEAEKGW RWVVLPGW+P+AGLKRGGVAVAFK+A
Sbjct: 303  VCRAEEREVEVEEAPWECAGVGDFGVVEAEKGWGRWVVLPGWEPVAGLKRGGVAVAFKNA 362

Query: 326  RVLPWRGNKWSREETILVVADRGRKEVVTDDNFYLVVGGGNGSAQEGLKVEKGLELKEIG 147
            RVLP R  KW+REE ILVVADRGRKEVVTDDNFYLVVGGGNGS +EGLKVE+GLELKEIG
Sbjct: 363  RVLPGRAKKWNREEAILVVADRGRKEVVTDDNFYLVVGGGNGSVEEGLKVERGLELKEIG 422

Query: 146  VKESLGTVVLVVRPPREDYDDHLSDEDWE 60
            VKESLGTVVLVVRPPRE+YDD LSDEDWE
Sbjct: 423  VKESLGTVVLVVRPPREEYDDQLSDEDWE 451


>gb|ADY38792.1| hypothetical protein MA29G21.11 [Coffea arabica]
          Length = 449

 Score =  593 bits (1530), Expect = e-167
 Identities = 318/447 (71%), Positives = 343/447 (76%), Gaps = 8/447 (1%)
 Frame = -1

Query: 1382 NTAKPLSLSTPFLPSHSFXXXXXXXXXXXXXPHSKRPNSIVALIIPPKSTA-QLQQVYQX 1206
            NTAKPLSLSTPFLPS                P SK PNS+VALIIPPKS+A Q QQ+YQ 
Sbjct: 8    NTAKPLSLSTPFLPS-----LLNPHKLLPPLPRSKHPNSVVALIIPPKSSAAQQQQLYQP 62

Query: 1205 XXXXXXXXXPQYRNLDTNGRLEILSNRLGLWFEYAPLVSSLLQEGFTPATLEEITGIXXX 1026
                     PQYRNLDTNGRLEILSNRLGLWFEYAPL+S+L QEGFTP TLEEITGI   
Sbjct: 63   FRPPPSPLPPQYRNLDTNGRLEILSNRLGLWFEYAPLISALFQEGFTPPTLEEITGISGV 122

Query: 1025 XXXXXXXXXX-------SEVDPDILSFFDTSGAELLYEIXXXXXXXXXXXAEYIVLNRFD 867
                             SE+DPDILSFFDT GAELLYEI           A+Y+VLN+FD
Sbjct: 123  EQNRLVVAAQVRESLVQSEIDPDILSFFDTGGAELLYEIRLLSASQRASAAKYLVLNKFD 182

Query: 866  AKMSLELARAMKDKPRRRGDKGWESFDDDLPGDCLAFVYFRLAQEHTTASSPEMRRIALE 687
            A+M+LELARA+KDKPRR+G+KGWESFD DLPGDCLAF+YFR AQEH TASSPE+ R ALE
Sbjct: 183  ARMTLELARAIKDKPRRKGEKGWESFDGDLPGDCLAFMYFRQAQEHRTASSPELSRSALE 242

Query: 686  RALLAVESENGRKRVXXXXXXXXXXXXXXXXGPAADEVIVPVVRMQTGEVAESSVVAVLP 507
            RAL AVESENGR+RV                G AAD V+VPVVRMQ GEVAESSVVAVLP
Sbjct: 243  RALQAVESENGRERVLEELEGKKDGEDKDKVGAAADRVVVPVVRMQIGEVAESSVVAVLP 302

Query: 506  VCRAQXXXXXXXEAPWECAGVGDFGVVEAEKGWSRWVVLPGWKPLAGLKRGGVAVAFKSA 327
            VCRA+       EAPWECAGVGDFGVVEAEKGWSRWVVLPGW+P+AGLKRGGVAVAFK+A
Sbjct: 303  VCRAEEREVKVEEAPWECAGVGDFGVVEAEKGWSRWVVLPGWEPVAGLKRGGVAVAFKNA 362

Query: 326  RVLPWRGNKWSREETILVVADRGRKEVVTDDNFYLVVGGGNGSAQEGLKVEKGLELKEIG 147
            RVLPWR  KW+R E ILVVADRGRK VVTDDNFYLVVGGGNGS  EGLKVE+GLELKEIG
Sbjct: 363  RVLPWRAKKWNRGEAILVVADRGRKGVVTDDNFYLVVGGGNGSVGEGLKVERGLELKEIG 422

Query: 146  VKESLGTVVLVVRPPREDYDDHLSDED 66
            VKESLGTVVLVVRPPRE+YDD LSDED
Sbjct: 423  VKESLGTVVLVVRPPREEYDDQLSDED 449


>ref|XP_009764918.1| PREDICTED: rubisco accumulation factor 2, chloroplastic-like
            [Nicotiana sylvestris]
          Length = 451

 Score =  433 bits (1114), Expect = e-118
 Identities = 231/455 (50%), Positives = 294/455 (64%), Gaps = 14/455 (3%)
 Frame = -1

Query: 1382 NTAKPLSLSTPFLPSHSFXXXXXXXXXXXXXPHSKRPNSIVALIIPPKS------TAQLQ 1221
            N+ KPLSLSTPFLPSH                    P  I ALIIPP S      + Q Q
Sbjct: 7    NSPKPLSLSTPFLPSHHHPLPSITHKPIL------NPKPITALIIPPSSGQQQQYSTQQQ 60

Query: 1220 QVYQXXXXXXXXXXPQYRNLDTNGRLEILSNRLGLWFEYAPLVSSLLQEGFTPATLEEIT 1041
            Q+YQ          P++RNLDTN +LE+LSNRLGLW+EYAPL+  L  EGFTP+TLEEIT
Sbjct: 61   QLYQPFRPPPPPLPPKFRNLDTNAKLEVLSNRLGLWYEYAPLIPYLTSEGFTPSTLEEIT 120

Query: 1040 GIXXXXXXXXXXXXX--------SEVDPDILSFFDTSGAELLYEIXXXXXXXXXXXAEYI 885
            G+                     + +D + LS+F++ GAELLYEI           A ++
Sbjct: 121  GLTGVEQNRLVVAAQVRDTLVESAALDEETLSYFESGGAELLYEIRLLSARQRTDAATFL 180

Query: 884  VLNRFDAKMSLELARAMKDKPRRRGDKGWESFDDDLPGDCLAFVYFRLAQEHTTASSPEM 705
            V N FDAK + +LARA+KD PRRR D GW+ F+ D PGDCLAF+YFRLAQE+  A+S ++
Sbjct: 181  VKNGFDAKQAQDLARAIKDYPRRRVDYGWDKFNGDSPGDCLAFMYFRLAQEYAAAASEDL 240

Query: 704  RRIALERALLAVESENGRKRVXXXXXXXXXXXXXXXXGPAADEVIVPVVRMQTGEVAESS 525
            RR ++E+AL  VESE+ R  +                    D V VP+VRM+ GEVAES+
Sbjct: 241  RRSSMEKALEVVESESARNLLVMELEGREVAKESVLD----DGVTVPLVRMKLGEVAEST 296

Query: 524  VVAVLPVCRAQXXXXXXXEAPWECAGVGDFGVVEAEKGWSRWVVLPGWKPLAGLKRGGVA 345
            +V VLPVC+A+        APWEC GVGDFG+VEAEK W RWVVLPGW+P+AGL+RGGVA
Sbjct: 297  IVVVLPVCKAEGRDVEVEAAPWECGGVGDFGIVEAEKDWRRWVVLPGWQPIAGLERGGVA 356

Query: 344  VAFKSARVLPWRGNKWSREETILVVADRGRKEVVTDDNFYLVVGGGNGSAQEGLKVEKGL 165
            V+FKS   LPWR     ++E +LVVADRGR EV ++D FYLVV GG+GS +EGLKVE+G 
Sbjct: 357  VSFKSGNFLPWREKSKYKQEPVLVVADRGRTEVASEDGFYLVVDGGDGSNEEGLKVERGS 416

Query: 164  ELKEIGVKESLGTVVLVVRPPREDYDDHLSDEDWE 60
             LK+ GV++SLG V++VVRPPR + ++ L +EDW+
Sbjct: 417  TLKKRGVEQSLGIVLIVVRPPRWEDEEQLGEEDWD 451


>ref|XP_006350959.1| PREDICTED: rubisco accumulation factor 1, chloroplastic-like [Solanum
            tuberosum]
          Length = 451

 Score =  430 bits (1105), Expect = e-117
 Identities = 239/455 (52%), Positives = 293/455 (64%), Gaps = 16/455 (3%)
 Frame = -1

Query: 1382 NTAKPLSLSTPFLPSHSFXXXXXXXXXXXXXPHSKRPNSIVALIIPPK-------STA-- 1230
            N+ KPLSLSTPFLPSH                 +  P  I ALIIPP        STA  
Sbjct: 7    NSPKPLSLSTPFLPSHPHPLPTITHKP------NLTPRPISALIIPPSGQRNQQYSTAAP 60

Query: 1229 QLQQVYQXXXXXXXXXXPQYRNLDTNGRLEILSNRLGLWFEYAPLVSSLLQEGFTPATLE 1050
            Q QQ+YQ          P++R+LDTN +LE+L+NRLGLW+EYAPL+ SL  EGFTP+TLE
Sbjct: 61   QQQQLYQPFRPPPSPLPPKFRHLDTNSKLEVLANRLGLWYEYAPLIPSLTSEGFTPSTLE 120

Query: 1049 EITGIXXXXXXXXXXXXXSE-------VDPDILSFFDTSGAELLYEIXXXXXXXXXXXAE 891
            EITGI                      +D + LSFF++ GAELLYEI           A 
Sbjct: 121  EITGITGVEQNRLVVAAQVRDTLVECGLDEETLSFFESGGAELLYEIRLLSVKQRADAAR 180

Query: 890  YIVLNRFDAKMSLELARAMKDKPRRRGDKGWESFDDDLPGDCLAFVYFRLAQEHTTASSP 711
            ++V N FD K + +LARAMKD PRRR D GW+ F  D PGDCLAF +FRLAQEH  A++ 
Sbjct: 181  FMVRNGFDMKQAQDLARAMKDFPRRRIDYGWDKFTGDSPGDCLAFWFFRLAQEHAAAAAE 240

Query: 710  EMRRIALERALLAVESENGRKRVXXXXXXXXXXXXXXXXGPAADEVIVPVVRMQTGEVAE 531
            E R  A+E+AL  VE+E+ R  +                    ++V VP+VRM+ GEVAE
Sbjct: 241  ESRVEAMEKALEVVETESARNVLVEVLEGKGVDKDSVID----EQVKVPLVRMKLGEVAE 296

Query: 530  SSVVAVLPVCRAQXXXXXXXEAPWECAGVGDFGVVEAEKGWSRWVVLPGWKPLAGLKRGG 351
            S+ V VLPVC+A+        APWEC GVGDFGVVEAEK W RWVVLPGW+P+AGL+RGG
Sbjct: 297  STKVVVLPVCKAEKREFEVEAAPWECGGVGDFGVVEAEKDWRRWVVLPGWQPIAGLERGG 356

Query: 350  VAVAFKSARVLPWRGNKWSREETILVVADRGRKEVVTDDNFYLVVGGGNGSAQEGLKVEK 171
            VAV+FKS ++LPW+  +  +EE +LVVADRGRKEVV DD FYLV+ GGNGS  EGL VEK
Sbjct: 357  VAVSFKSGKLLPWKEKRKYKEEPVLVVADRGRKEVVVDDGFYLVLSGGNGSGDEGLMVEK 416

Query: 170  GLELKEIGVKESLGTVVLVVRPPREDYDDHLSDED 66
            GL LKE+GV++SLG V+LVVRPPR + ++ L DED
Sbjct: 417  GLTLKEMGVEKSLGMVLLVVRPPRWEDEEQLIDED 451


>ref|XP_009623604.1| PREDICTED: rubisco accumulation factor 2, chloroplastic [Nicotiana
            tomentosiformis]
          Length = 453

 Score =  425 bits (1092), Expect = e-116
 Identities = 227/457 (49%), Positives = 292/457 (63%), Gaps = 16/457 (3%)
 Frame = -1

Query: 1382 NTAKPLSLSTPFLPSHSFXXXXXXXXXXXXXPHSKRPNSIVALIIPPKS--------TAQ 1227
            N+ K LSLSTPFLP+H                 +  P  I ALIIPP S          Q
Sbjct: 7    NSPKLLSLSTPFLPTHPHPLPSITHKP------NLNPKPITALIIPPSSGQQQQYSTQQQ 60

Query: 1226 LQQVYQXXXXXXXXXXPQYRNLDTNGRLEILSNRLGLWFEYAPLVSSLLQEGFTPATLEE 1047
             QQ+YQ          P++RNLDTN +LE+L+NRLGLW+EYAPL+ SL  EGFTP+TLEE
Sbjct: 61   QQQLYQPFRPPPPLLPPKFRNLDTNSKLEVLANRLGLWYEYAPLIPSLTSEGFTPSTLEE 120

Query: 1046 ITGIXXXXXXXXXXXXX--------SEVDPDILSFFDTSGAELLYEIXXXXXXXXXXXAE 891
            ITG+                     + +D + LS+F++ GAELLYEI           A 
Sbjct: 121  ITGLTGVDQNRLVVAAQVRDSLVESAALDEETLSYFESGGAELLYEIRLVSARQRADAAT 180

Query: 890  YIVLNRFDAKMSLELARAMKDKPRRRGDKGWESFDDDLPGDCLAFVYFRLAQEHTTASSP 711
            ++V N FDAK + +LARA+KD PRRR + GW+ F+ D PGDCLAF+YFRLAQE+  A+S 
Sbjct: 181  FLVKNGFDAKQAQDLARAIKDYPRRRVEYGWDKFNGDSPGDCLAFMYFRLAQEYAAAASE 240

Query: 710  EMRRIALERALLAVESENGRKRVXXXXXXXXXXXXXXXXGPAADEVIVPVVRMQTGEVAE 531
            ++RR ++E+AL   ESE+ R  +                    D V VP+VRM+ GEVAE
Sbjct: 241  DLRRSSMEKALEVAESESARNLLVMELEGNEVAKESVID----DGVTVPLVRMKLGEVAE 296

Query: 530  SSVVAVLPVCRAQXXXXXXXEAPWECAGVGDFGVVEAEKGWSRWVVLPGWKPLAGLKRGG 351
            S++V VLPVC+A+        APWEC GVGDFG++EAEK W RWVVLPGW+P+AGL+RGG
Sbjct: 297  STIVVVLPVCKAEGRDVEVEAAPWECGGVGDFGIMEAEKDWRRWVVLPGWQPIAGLERGG 356

Query: 350  VAVAFKSARVLPWRGNKWSREETILVVADRGRKEVVTDDNFYLVVGGGNGSAQEGLKVEK 171
            VAV+FKS   LPWR     ++E +LVVADRGR EV ++D FYLVV GGNGS +EGLKVE+
Sbjct: 357  VAVSFKSGNFLPWREKSKYKQEPVLVVADRGRTEVASEDGFYLVVDGGNGSNEEGLKVER 416

Query: 170  GLELKEIGVKESLGTVVLVVRPPREDYDDHLSDEDWE 60
            G  LK+ GV++SLG V++VVRPP+   +D L +EDW+
Sbjct: 417  GSTLKKRGVEQSLGIVLIVVRPPKWGDEDQLGEEDWD 453


>ref|XP_004249913.1| PREDICTED: rubisco accumulation factor 1, chloroplastic [Solanum
            lycopersicum]
          Length = 451

 Score =  424 bits (1091), Expect = e-116
 Identities = 236/455 (51%), Positives = 291/455 (63%), Gaps = 16/455 (3%)
 Frame = -1

Query: 1382 NTAKPLSLSTPFLPSHSFXXXXXXXXXXXXXPHSKRPNSIVALIIPPK-------STA-- 1230
            N+ K LSLSTPFLPSH                 +  P  I ALIIPP        STA  
Sbjct: 7    NSPKSLSLSTPFLPSHPHPIPTITHKP------NLSPRPISALIIPPSGQRNQQYSTAPP 60

Query: 1229 QLQQVYQXXXXXXXXXXPQYRNLDTNGRLEILSNRLGLWFEYAPLVSSLLQEGFTPATLE 1050
            Q QQ+YQ          P++RNLDTN +LE+L+NRLGLW+EYAPL+ SL  EGFTP+TLE
Sbjct: 61   QQQQLYQPFRPPPSPLPPKFRNLDTNSKLEVLANRLGLWYEYAPLIPSLTSEGFTPSTLE 120

Query: 1049 EITGIXXXXXXXXXXXXXSE-------VDPDILSFFDTSGAELLYEIXXXXXXXXXXXAE 891
            EITGI                      +D + LSFF++ GAELLYEI           A 
Sbjct: 121  EITGITGVEQNRLVVAAQVRETLVECGLDEETLSFFESGGAELLYEIRLLSGKQRTDAAS 180

Query: 890  YIVLNRFDAKMSLELARAMKDKPRRRGDKGWESFDDDLPGDCLAFVYFRLAQEHTTASSP 711
            +IV N FD K + +LAR+MKD PRRR D GW+ F  D PGDCLAF +FRLAQEH  A++ 
Sbjct: 181  FIVRNGFDMKQAQDLARSMKDFPRRRIDYGWDKFTGDSPGDCLAFWFFRLAQEHAAAAAE 240

Query: 710  EMRRIALERALLAVESENGRKRVXXXXXXXXXXXXXXXXGPAADEVIVPVVRMQTGEVAE 531
            + R  A+E+AL  VE+E+ R  +                    ++V VP+VRM+ GEVAE
Sbjct: 241  DSRVEAMEKALEVVETESARNVLVEVLEGKGVDKESVID----EQVKVPLVRMKLGEVAE 296

Query: 530  SSVVAVLPVCRAQXXXXXXXEAPWECAGVGDFGVVEAEKGWSRWVVLPGWKPLAGLKRGG 351
            S+ V VLPVC+A+        APWEC GVG+FGVVEAEK W RWVVLPGW+P+AGL+RGG
Sbjct: 297  STKVVVLPVCKAEKREFEVEAAPWECGGVGEFGVVEAEKDWRRWVVLPGWQPIAGLERGG 356

Query: 350  VAVAFKSARVLPWRGNKWSREETILVVADRGRKEVVTDDNFYLVVGGGNGSAQEGLKVEK 171
            VAV+FK+ ++LPW+  +  +EE +LVVADRGRKEVV DD FYLV+ GGNGS  EGLKVE+
Sbjct: 357  VAVSFKNGKLLPWKEKRKYKEEPVLVVADRGRKEVVVDDGFYLVLSGGNGSGDEGLKVER 416

Query: 170  GLELKEIGVKESLGTVVLVVRPPREDYDDHLSDED 66
            GL LKE+GV+ SLG V+LVVRPPR + +D   DED
Sbjct: 417  GLNLKEMGVEMSLGMVLLVVRPPRWEDEDQQIDED 451


>ref|XP_008462710.1| PREDICTED: rubisco accumulation factor 1, chloroplastic [Cucumis
            melo]
          Length = 454

 Score =  405 bits (1041), Expect = e-110
 Identities = 231/420 (55%), Positives = 276/420 (65%), Gaps = 13/420 (3%)
 Frame = -1

Query: 1280 KRPNSIVALIIP-PKSTAQLQQVYQXXXXXXXXXXPQYRNLDTNGRLEILSNRLGLWFEY 1104
            +R N I A+I P P   A  QQVYQ          PQYR+LDT G+L +LSNRLGLWF+Y
Sbjct: 40   RRSNPISAIINPSPSPLAAKQQVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFQY 99

Query: 1103 APLVSSLLQEGFTPATLEEITGIXXXXXXXXXXXXX--------SEVDPDILSFFDTSGA 948
            APL+SSLLQEGFTP TLEEITGI                     ++ DPD+++ FDTSGA
Sbjct: 100  APLISSLLQEGFTPPTLEEITGISGVQQNTFVVGAQVRESLVQSNDSDPDVIASFDTSGA 159

Query: 947  ELLYEIXXXXXXXXXXXAEYIVLNRFDAKMSLELARAMKDKPRRRGDKGWESFDDDLPGD 768
            ELLYEI           A+YIV NR D+K + +LARA+KD PRR+GD+GWE FD D  GD
Sbjct: 160  ELLYEIRLLSTEKRVAAAKYIVENRLDSKGAQDLARAIKDFPRRKGDRGWECFDYDSAGD 219

Query: 767  CLAFVYFRLAQEHTTASSPEMRRIALERALLAVESENGRKRVXXXXXXXXXXXXXXXXGP 588
            CLA++Y+RL++E+  +S  E R  ALE AL  V +E  R  +                  
Sbjct: 220  CLAYMYYRLSREYNNSS--ERRTAALEEALKVVVTEKARNLIVGDLERKGDGKDGVEEET 277

Query: 587  AADEVIVPVVRMQTGEVAESSVVAVLPVCRAQXXXXXXXEAPWECAGVGDFGVVEAEKGW 408
             A  V VPVVR++ GEVAE++ V V+PVC+A        EAP E    GDFGVV AEKGW
Sbjct: 278  GAG-VRVPVVRLKIGEVAEATKVVVMPVCKAGEGEKGVGEAPMEVRSEGDFGVVVAEKGW 336

Query: 407  SRWVVLPGWKPLAGL-KRGGVAVAFKSARVLPWRGNKWSREETILVVADRGRKEVVTDDN 231
            SRWVVLPGW+P+AGL K GGV VAFK ARVLPWR N+W +EE ILVVADR RKEVV  D 
Sbjct: 337  SRWVVLPGWEPVAGLVKGGGVVVAFKDARVLPWRVNRWYKEEPILVVADRSRKEVVAGDG 396

Query: 230  FYLV---VGGGNGSAQEGLKVEKGLELKEIGVKESLGTVVLVVRPPREDYDDHLSDEDWE 60
            FYL+   VGGG+G  +  LKVE+G  L E+GVKESLGTVVLVVRPP+E  DD LSDEDW+
Sbjct: 397  FYLMGGTVGGGDGGGE--LKVERGNALTEMGVKESLGTVVLVVRPPKEMEDDQLSDEDWD 454


>ref|XP_007205174.1| hypothetical protein PRUPE_ppa005554mg [Prunus persica]
            gi|462400816|gb|EMJ06373.1| hypothetical protein
            PRUPE_ppa005554mg [Prunus persica]
          Length = 454

 Score =  404 bits (1038), Expect = e-109
 Identities = 216/415 (52%), Positives = 269/415 (64%), Gaps = 9/415 (2%)
 Frame = -1

Query: 1277 RPNSI--VALIIPPKSTAQLQQVYQXXXXXXXXXXPQYRNLDTNGRLEILSNRLGLWFEY 1104
            +P+S+  ++  + P S++Q QQVYQ           ++R+LD NGRLEIL+NRLGLW+E+
Sbjct: 46   KPSSLKPISATLTPSSSSQQQQVYQPFRPPPSPVPAKFRSLDANGRLEILANRLGLWYEF 105

Query: 1103 APLVSSLLQEGFTPATLEEITGIXXXXXXXXXXXXX-------SEVDPDILSFFDTSGAE 945
            APL+ SLLQEGFTP T+EE+TGI                    S+ DP IL+ FDT G+E
Sbjct: 106  APLIPSLLQEGFTPPTIEEVTGISGVEQNRLVVAAQVRDSLVQSKTDPKILAEFDTGGSE 165

Query: 944  LLYEIXXXXXXXXXXXAEYIVLNRFDAKMSLELARAMKDKPRRRGDKGWESFDDDLPGDC 765
            LLYEI           A YI+ N+ DAK + +LAR+MKD PRRRGDKGWESFD   PGDC
Sbjct: 166  LLYEIRLLSVQQRAAAARYIIENKLDAKGTQDLARSMKDFPRRRGDKGWESFDYAHPGDC 225

Query: 764  LAFVYFRLAQEHTTASSPEMRRIALERALLAVESENGRKRVXXXXXXXXXXXXXXXXGPA 585
            L F+Y+R A+EH   S P  R  ALE+AL    ++  +K +                G  
Sbjct: 226  LGFIYYRQAREHKNPSEP--RTAALEQALKVAGTDKAKK-IILTDLEGETDEKEGREGDV 282

Query: 584  ADEVIVPVVRMQTGEVAESSVVAVLPVCRAQXXXXXXXEAPWECAGVGDFGVVEAEKGWS 405
             D V VPVVR++ GEVAESS V +LPVCRA        EAPWEC+  G+FGVV AEKGW 
Sbjct: 283  IDVVRVPVVRLKFGEVAESSKVVILPVCRADEKDKEVLEAPWECSSEGEFGVVVAEKGWK 342

Query: 404  RWVVLPGWKPLAGLKRGGVAVAFKSARVLPWRGNKWSREETILVVADRGRKEVVTDDNFY 225
            RWVVLPGW+P+ GL +GGV V+F  ARVLPW+ N+W +EE IL+VADR +KEV  DD FY
Sbjct: 343  RWVVLPGWEPVVGLGKGGVVVSFSDARVLPWKVNRWYKEEPILLVADRSKKEVTADDGFY 402

Query: 224  LVVGGGNGSAQEGLKVEKGLELKEIGVKESLGTVVLVVRPPREDYDDHLSDEDWE 60
            L    G G    G KV +G  LKE GVKESLGTVV++VRPPR++ DD LS+EDWE
Sbjct: 403  LAAVEGGGL---GFKVVRGSALKETGVKESLGTVVMIVRPPRDETDDQLSEEDWE 454


>ref|XP_011077232.1| PREDICTED: rubisco accumulation factor 1, chloroplastic [Sesamum
            indicum]
          Length = 453

 Score =  404 bits (1037), Expect = e-109
 Identities = 233/451 (51%), Positives = 283/451 (62%), Gaps = 10/451 (2%)
 Frame = -1

Query: 1382 NTAKPLSLSTPFLPSHSFXXXXXXXXXXXXXPHSKRPNSIVALIIPPKSTA--QLQQVYQ 1209
            NT KPL L+TPFLP+H                  K P S+ ALI+PP S+   Q Q+VYQ
Sbjct: 7    NTPKPLFLATPFLPNHHHHHHHLHPPPLNTQKPPK-PLSVSALILPPSSSTSQQQQKVYQ 65

Query: 1208 XXXXXXXXXXPQYRNLDTNGRLEILSNRLGLWFEYAPLVSSLLQEGFTPATLEEITGIXX 1029
                       +YRNLDTN +LEILSNRLGLWFEYAPL++SL+ EGF   TLEEITGI  
Sbjct: 66   PYRPPPSPLPSKYRNLDTNAQLEILSNRLGLWFEYAPLITSLIGEGFISTTLEEITGIPS 125

Query: 1028 XXXXXXXXXXX------SEVDPDILSFFD-TSGAELLYEIXXXXXXXXXXXAEYIVLNRF 870
                                D + +S+FD     E+LYEI           A +I+ + F
Sbjct: 126  LEQNCLVVAAQVRDSLVESTDEETVSYFDGPRSPEILYEIRILNTTQRALAARFIIAHGF 185

Query: 869  DAKMSLELARAMKDKPRRRGDKGWESFDDDLPGDCLAFVYFRLAQEHTTASSPEMRRIAL 690
            + K S ELAR+MKD PRR G++GW SFD +LPGDCLAF+YFR   EH +A SPE+ + A 
Sbjct: 186  ERKKSEELARSMKDFPRRYGERGWGSFDGNLPGDCLAFMYFRQGHEHKSALSPELSKAAW 245

Query: 689  ERALLAVESENGRKRVXXXXXXXXXXXXXXXXGPAADEVIVPVVRMQTGEVAESSVVAVL 510
            ERAL   E+E   K++                    D V VPVVRM  GEVAESSVV VL
Sbjct: 246  ERALEMAETEKA-KQIILEDLEGKDGEGGEGGIGIDDLVRVPVVRMAIGEVAESSVVVVL 304

Query: 509  PVCRAQXXXXXXXEAPWECAGVGDFGVVEAEKGWSRWVVLPGWKPLAGLKRGGVAVAFKS 330
            PVCRA+       EAPWE    G+FG+V+ EK WSRWVVLPGW P+A LKRGGVAVAF  
Sbjct: 305  PVCRAEEREVAVEEAPWESGMGGEFGMVQVEKPWSRWVVLPGWAPVAVLKRGGVAVAFPK 364

Query: 329  AR-VLPWRGNKWSREETILVVADRGRKEVVTDDNFYLVVGGGNGSAQEGLKVEKGLELKE 153
            AR VLPWR  +   +E ILVV DR  +EVV DD F+LVV GGNGS +EGLKVE+G +LKE
Sbjct: 365  ARGVLPWRSRRRDADEEILVVVDR-EQEVVADDGFHLVVSGGNGSGEEGLKVERGAKLKE 423

Query: 152  IGVKESLGTVVLVVRPPREDYDDHLSDEDWE 60
            +GV++SLGTVVLVVRPPRE+ +D L+D +W+
Sbjct: 424  MGVEKSLGTVVLVVRPPREE-EDQLADIEWD 453


>ref|XP_008218310.1| PREDICTED: rubisco accumulation factor 1, chloroplastic [Prunus mume]
          Length = 450

 Score =  404 bits (1037), Expect = e-109
 Identities = 222/450 (49%), Positives = 274/450 (60%), Gaps = 9/450 (2%)
 Frame = -1

Query: 1382 NTAKPLSLSTPFLPSHSFXXXXXXXXXXXXXPHSKRPNSI--VALIIPPKSTAQLQQVYQ 1209
            NT KP S   P   ++                   +P+S+  ++  + P S+ Q QQVYQ
Sbjct: 7    NTLKPFSSFNPNTNTNLLLFSTSFLNPRPPPLLYPKPSSLKPISATLTPSSSFQQQQVYQ 66

Query: 1208 XXXXXXXXXXPQYRNLDTNGRLEILSNRLGLWFEYAPLVSSLLQEGFTPATLEEITGIXX 1029
                       ++R+LD NGR+EILSNRLGLW+E+APL+ SLLQEGFTP T+EE TGI  
Sbjct: 67   PFRPPPSPVPAKFRSLDANGRIEILSNRLGLWYEFAPLIPSLLQEGFTPPTIEEATGISG 126

Query: 1028 XXXXXXXXXXX-------SEVDPDILSFFDTSGAELLYEIXXXXXXXXXXXAEYIVLNRF 870
                              S+ DP IL+ FDT G+ELLYEI           A YI+ N+ 
Sbjct: 127  VEQNRLVVAAQVRDSLVQSKTDPQILAEFDTGGSELLYEIRLLSVQQRAAAARYIIENKL 186

Query: 869  DAKMSLELARAMKDKPRRRGDKGWESFDDDLPGDCLAFVYFRLAQEHTTASSPEMRRIAL 690
            DAK + +LAR+MKD PRRRG+KGWESFD   PGDCL F+Y+R A+EH   S P  R  AL
Sbjct: 187  DAKGTQDLARSMKDFPRRRGEKGWESFDYAHPGDCLGFMYYRQAREHKNPSEP--RTAAL 244

Query: 689  ERALLAVESENGRKRVXXXXXXXXXXXXXXXXGPAADEVIVPVVRMQTGEVAESSVVAVL 510
            E+AL    ++  +K +                    D V VPVVR++ GEVAESS V +L
Sbjct: 245  EQALKVAGTDKAKK-IILTDFEGETDEKEGREWDVIDAVRVPVVRLKFGEVAESSKVVIL 303

Query: 509  PVCRAQXXXXXXXEAPWECAGVGDFGVVEAEKGWSRWVVLPGWKPLAGLKRGGVAVAFKS 330
            PVCRA+       EAPWEC+  G+FGVV AEKGW RWVVLPGW+P+ GL +G V V+F  
Sbjct: 304  PVCRAEEKDKEVLEAPWECSSEGEFGVVVAEKGWKRWVVLPGWEPVVGLGKGAVVVSFSD 363

Query: 329  ARVLPWRGNKWSREETILVVADRGRKEVVTDDNFYLVVGGGNGSAQEGLKVEKGLELKEI 150
            ARVLPW+ NKW +EE ILVVADR +KEV  DD FYL    G G    G KV +G  LKE 
Sbjct: 364  ARVLPWKVNKWYKEEPILVVADRSKKEVAADDGFYLAAVEGGGL---GFKVVRGSALKET 420

Query: 149  GVKESLGTVVLVVRPPREDYDDHLSDEDWE 60
            GVKESLGTVV++VRPPR+D DD LS+EDWE
Sbjct: 421  GVKESLGTVVMIVRPPRDDTDDQLSEEDWE 450


>ref|XP_004142574.1| PREDICTED: rubisco accumulation factor 1, chloroplastic [Cucumis
            sativus] gi|700211694|gb|KGN66790.1| hypothetical protein
            Csa_1G690280 [Cucumis sativus]
          Length = 450

 Score =  403 bits (1035), Expect = e-109
 Identities = 232/417 (55%), Positives = 273/417 (65%), Gaps = 10/417 (2%)
 Frame = -1

Query: 1280 KRPNSIVALIIPPKST-AQLQQVYQXXXXXXXXXXPQYRNLDTNGRLEILSNRLGLWFEY 1104
            +R N I A+I P  S+ A  QQVYQ          PQYR+LDT G+L ILSNRLGLWFEY
Sbjct: 40   RRLNPISAIINPSSSSLAAKQQVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEY 99

Query: 1103 APLVSSLLQEGFTPATLEEITGIXXXXXXXXXXXXX--------SEVDPDILSFFDTSGA 948
            APL+SSLLQEGFTP  LEEITGI                     ++ DPD+++ FDT GA
Sbjct: 100  APLISSLLQEGFTPPVLEEITGISGVQQNSFIVGAQVRESLLQSNDSDPDVIASFDTGGA 159

Query: 947  ELLYEIXXXXXXXXXXXAEYIVLNRFDAKMSLELARAMKDKPRRRGDKGWESFDDDLPGD 768
            ELLYEI           A+YIV NR D+K + +LARAMKD PRRRGDKGWE FD D  GD
Sbjct: 160  ELLYEIRLLSTEKRAAAAKYIVENRLDSKGAQDLARAMKDFPRRRGDKGWEYFDYDFAGD 219

Query: 767  CLAFVYFRLAQEHTTASSPEMRRIALERALLAVESENGRKRVXXXXXXXXXXXXXXXXGP 588
            CLA++Y+RL++E+   SS E R  ALE AL  V +E  R  +                  
Sbjct: 220  CLAYMYYRLSREYN--SSTERRTAALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEI 277

Query: 587  AADEVIVPVVRMQTGEVAESSVVAVLPVCRAQXXXXXXXEAPWECAGVGDFGVVEAEKGW 408
             A  V VPVVRM+ GEVAE++ V V+PVC+A        EAP E    G+FGVV AEKGW
Sbjct: 278  GA-AVKVPVVRMKIGEVAEATTVVVMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGW 336

Query: 407  SRWVVLPGWKPLAGL-KRGGVAVAFKSARVLPWRGNKWSREETILVVADRGRKEVVTDDN 231
            SRWVVLPGW+P+AGL K GGV VAF+ ARVLPWR N+W +EE ILVVADR R+EVV  D 
Sbjct: 337  SRWVVLPGWEPVAGLVKGGGVVVAFEDARVLPWRVNRWYKEEPILVVADRSRREVVAGDG 396

Query: 230  FYLVVGGGNGSAQEGLKVEKGLELKEIGVKESLGTVVLVVRPPREDYDDHLSDEDWE 60
            FYL +GGG+G     LKVE+G  L E+GVKESLGTV+LVVRPPRE  DD LSDEDW+
Sbjct: 397  FYL-MGGGDGGGD--LKVERGNALMEMGVKESLGTVLLVVRPPRETEDDQLSDEDWD 450


>ref|XP_006487727.1| PREDICTED: rubisco accumulation factor 1, chloroplastic-like [Citrus
            sinensis]
          Length = 442

 Score =  396 bits (1017), Expect = e-107
 Identities = 217/412 (52%), Positives = 266/412 (64%), Gaps = 10/412 (2%)
 Frame = -1

Query: 1265 IVALIIPPKSTAQL---QQVYQXXXXXXXXXXPQYRNLDTNGRLEILSNRLGLWFEYAPL 1095
            I A+IIPP S++Q    QQ+YQ          P++RNLD  GR+++L+N LGLW+EYAPL
Sbjct: 39   ISAIIIPPSSSSQQYQQQQLYQPFRPPPSPLPPKFRNLDVAGRIDVLTNSLGLWYEYAPL 98

Query: 1094 VSSLLQEGFTPATLEEITGIXXXXXXXXXXXXX-------SEVDPDILSFFDTSGAELLY 936
            +SSL QEGF+P T+EE TGI                    S+ DPD+LSFFDT GAELLY
Sbjct: 99   ISSLYQEGFSPPTIEEATGISGVEQNRLVVAAQVRDSLVQSKTDPDVLSFFDTGGAELLY 158

Query: 935  EIXXXXXXXXXXXAEYIVLNRFDAKMSLELARAMKDKPRRRGDKGWESFDDDLPGDCLAF 756
            EI           A+Y V N+ DA+   +LARA+KD PRR+GD  W  F+  LPGDCL+F
Sbjct: 159  EIRLLSASQRAAAAKYAVENKLDAQGCRDLARAVKDFPRRKGDTAWGKFNYVLPGDCLSF 218

Query: 755  VYFRLAQEHTTASSPEMRRIALERALLAVESENGRKRVXXXXXXXXXXXXXXXXGPAADE 576
            +Y+R ++E+   S  E R  AL+ AL  VESE+  K V                    D 
Sbjct: 219  MYYRQSKEYKNPS--EERTAALQLALDVVESEDA-KNVITRELEGGRAGKDSTGDELVDV 275

Query: 575  VIVPVVRMQTGEVAESSVVAVLPVCRAQXXXXXXXEAPWECAGVGDFGVVEAEKGWSRWV 396
            V VPVVR++ GEV+E++ V VLPVCRA+       EAPWEC   GDFGVV AEKGW+RWV
Sbjct: 276  VKVPVVRLKIGEVSEATTVVVLPVCRAEEKENNVLEAPWECKSEGDFGVVVAEKGWTRWV 335

Query: 395  VLPGWKPLAGLKRGGVAVAFKSARVLPWRGNKWSREETILVVADRGRKEVVTDDNFYLVV 216
            VLPGW+P+ GL+ GGV VAF  ARVLPWR N+W  EE ILVVADR RKEV  DD FYLVV
Sbjct: 336  VLPGWEPVVGLRNGGVVVAFSDARVLPWRANRWYYEEAILVVADRSRKEVAVDDGFYLVV 395

Query: 215  GGGNGSAQEGLKVEKGLELKEIGVKESLGTVVLVVRPPREDYDDHLSDEDWE 60
            G G       LKVE+G  LKE GV+ESLGTV LVVRPP+E+ DD ++DEDW+
Sbjct: 396  GDGG-----ELKVERGSMLKERGVEESLGTVALVVRPPKEETDDQIADEDWD 442


>ref|XP_002521962.1| conserved hypothetical protein [Ricinus communis]
            gi|223538766|gb|EEF40366.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 450

 Score =  395 bits (1016), Expect = e-107
 Identities = 229/450 (50%), Positives = 275/450 (61%), Gaps = 9/450 (2%)
 Frame = -1

Query: 1382 NTAKPLSLSTPFLP-SHSFXXXXXXXXXXXXXPHSKRPNSIVALIIPPKSTAQLQQVYQX 1206
            NT  P+SLS P  P S SF                 +P  I A +IP       QQ+YQ 
Sbjct: 7    NTHIPISLSNPNKPFSSSFITPLFTYVSPSSQKTQLKP--ISAALIPSTPPPSNQQLYQP 64

Query: 1205 XXXXXXXXXPQYRNLDTNGRLEILSNRLGLWFEYAPLVSSLLQEGFTPATLEEITGIXXX 1026
                      Q+ +LDT GRLE+L+NRLGLW+EYAPL+ SL+QEGF+P ++EE TGI   
Sbjct: 65   FRPPPSPIPSQFSSLDTAGRLEVLANRLGLWYEYAPLIPSLIQEGFSPPSIEESTGISGV 124

Query: 1025 XXXXXXXXXX-------SEVDPDILSFFDTSGAELLYEIXXXXXXXXXXXAEYIVLNRFD 867
                             S+   +I+S FDT GAELLYEI           A +IV NR D
Sbjct: 125  EQNRLVVAAKVRESLTQSQTAAEIVSEFDTGGAELLYEIRLLSAPQRAAAARFIVENRLD 184

Query: 866  AKMSLELARAMKDKPRRRGDKGWESFDDDLPGDCLAFVYFRLAQEHTTASSPEMRRIALE 687
            AK + +LARAMKD PRRRGDKGWESFD  LPGDCL+F+Y+R ++EH T S P  R  ALE
Sbjct: 185  AKGAEDLARAMKDFPRRRGDKGWESFDYTLPGDCLSFMYYRQSREHKTPSEP--RTNALE 242

Query: 686  RALLAVESENGRKRVXXXXXXXXXXXXXXXXGPAADEVIVPVVRMQTGEVAESSVVAVLP 507
            RAL   ESE  +  V                    D   VPVVR++ GEVAE++ V VLP
Sbjct: 243  RALDVAESEKAKNEVLKELEGDSEGKEEKEGE-VGDATRVPVVRLRIGEVAEATSVVVLP 301

Query: 506  VCRAQXXXXXXXEAPWECAGVGDFGVVEAEKGWSRWVVLPGWKPLAGLKRGGVAVAFKSA 327
            VCRA        EAPWEC   G+FGVV AEKGW RWVVLPGW+P+ GL++GGV VAF  A
Sbjct: 302  VCRALQKEKEIWEAPWECKSEGEFGVVVAEKGWERWVVLPGWEPVVGLEKGGVVVAFPDA 361

Query: 326  RVLPWRGNKWSREETILVVADRGRKEVVTDDNFYLVVGGGNGSAQE-GLKVEKGLELKEI 150
            R LPW+ N+W +EE ILVVADRG KEV  +D FYLV   G+G  +  GL+VE+G  LKE 
Sbjct: 362  RALPWKVNRWYKEEAILVVADRGSKEVNANDGFYLVAVDGSGDGRSGGLEVERGSILKER 421

Query: 149  GVKESLGTVVLVVRPPREDYDDHLSDEDWE 60
            GV+ESLGTVVLVVRPP+E   D LSDE+WE
Sbjct: 422  GVEESLGTVVLVVRPPKEQ-TDQLSDENWE 450


>ref|XP_008370732.1| PREDICTED: rubisco accumulation factor 1, chloroplastic-like [Malus
            domestica]
          Length = 449

 Score =  392 bits (1008), Expect = e-106
 Identities = 223/454 (49%), Positives = 271/454 (59%), Gaps = 13/454 (2%)
 Frame = -1

Query: 1382 NTAKPLSLSTP---FLPSHSFXXXXXXXXXXXXXPHSK--RPNSIVALIIPPKSTAQLQ- 1221
            N+ KP S   P   FL S SF              H K   P  I A + P  ST Q Q 
Sbjct: 7    NSLKPFSSFNPTTTFLSSTSFLNPHPPLLL-----HHKPSSPKPISATLTPSSSTQQQQK 61

Query: 1220 QVYQXXXXXXXXXXPQYRNLDTNGRLEILSNRLGLWFEYAPLVSSLLQEGFTPATLEEIT 1041
            QVYQ           ++R+LD NGRLEIL+NRLGLWFEYAPL+ SL QEGFTP T+EEIT
Sbjct: 62   QVYQPFRPPPSPIPSKFRSLDANGRLEILANRLGLWFEYAPLIPSLTQEGFTPPTIEEIT 121

Query: 1040 GIXXXXXXXXXXXXX-------SEVDPDILSFFDTSGAELLYEIXXXXXXXXXXXAEYIV 882
            GI                    S  DP+I+S FD  G+ELLYEI           + +I+
Sbjct: 122  GISGVEQNRLVVAAQVRDSLVQSNTDPEIVSEFDLGGSELLYEIRLLSVQQRAAASRFII 181

Query: 881  LNRFDAKMSLELARAMKDKPRRRGDKGWESFDDDLPGDCLAFVYFRLAQEHTTASSPEMR 702
             N+ D K + +LAR+MKD PRRR +KGWESFD   PGDCL F+YFR  +EH   S P  R
Sbjct: 182  ENKLDGKGAQDLARSMKDFPRRRTEKGWESFDYASPGDCLGFMYFRQGREHKNPSEP--R 239

Query: 701  RIALERALLAVESENGRKRVXXXXXXXXXXXXXXXXGPAADEVIVPVVRMQTGEVAESSV 522
              ALE+AL   +++  +K +                  AA  V VPVVR++ GEVAES+ 
Sbjct: 240  TAALEQALKVAQTDKAKKVILKELEGESEDKEEEEEDVAAG-VRVPVVRLKFGEVAESTK 298

Query: 521  VAVLPVCRAQXXXXXXXEAPWECAGVGDFGVVEAEKGWSRWVVLPGWKPLAGLKRGGVAV 342
            V +LPVCRA+       EAPWEC   G+ GV+ AEKGW RWVVLPGW+P+  L +GGV V
Sbjct: 299  VVILPVCRAEEKDKEVMEAPWECTSEGELGVMVAEKGWKRWVVLPGWEPVVSLGKGGVVV 358

Query: 341  AFKSARVLPWRGNKWSREETILVVADRGRKEVVTDDNFYLVVGGGNGSAQEGLKVEKGLE 162
            +F  ARVLPW+ N+W +EE ILVVADR ++EV  DD FYL    G G    G KV +G  
Sbjct: 359  SFSDARVLPWKANRWYKEEPILVVADRSKREVEADDGFYLAAXDGEGL---GFKVVRGSA 415

Query: 161  LKEIGVKESLGTVVLVVRPPREDYDDHLSDEDWE 60
            LKE GV+ESLGTVVL+VRPPR++ DD LSDEDWE
Sbjct: 416  LKEAGVEESLGTVVLIVRPPRDETDDQLSDEDWE 449


>ref|XP_012858338.1| PREDICTED: rubisco accumulation factor 1, chloroplastic [Erythranthe
            guttatus]
          Length = 452

 Score =  392 bits (1006), Expect = e-106
 Identities = 228/454 (50%), Positives = 282/454 (62%), Gaps = 13/454 (2%)
 Frame = -1

Query: 1382 NTAKPLSLSTPFLPSHSFXXXXXXXXXXXXXPHSKRPNSIVALIIPPKSTA---QLQQVY 1212
            NT  P  LSTPFLP+H                 SK P SI A+IIPP S+    Q  Q+Y
Sbjct: 7    NTPNPTYLSTPFLPNHHHHRHPPPPPSNPQNRPSK-PLSISAIIIPPSSSTSHKQQSQLY 65

Query: 1211 QXXXXXXXXXXPQYRNLDTNGRLEILSNRLGLWFEYAPLVSSLLQEGFTPATLEEITGIX 1032
            Q           ++R LDTN +L+IL++RLG WFEYAPL++SL+QEGF   T+EEITGI 
Sbjct: 66   QPYRPPPTLLPAKWRYLDTNQKLDILTDRLGQWFEYAPLITSLIQEGFISTTIEEITGIA 125

Query: 1031 XXXXXXXXXXXX------SEVDPDILSFFDT-SGAELLYEIXXXXXXXXXXXAEYIVLNR 873
                               + DP+ ++FFD  +G ++LYE+           A Y++ N 
Sbjct: 126  SIEQNRLVVATQVRDSLVEDTDPETVAFFDNPAGPKILYELRILSAEQRAVAARYLIANG 185

Query: 872  FDAKMSLELARAMKDKPRRRGDKGWESFDDDLPGDCLAFVYFRLAQEHTTASSPEMRRIA 693
            FDA+ + ELAR+MKD PRR GDK ++SFD +LPGDCLA++YFR AQEH TA SPE    A
Sbjct: 186  FDARKTEELARSMKDYPRRYGDKWYQSFDGNLPGDCLAYMYFRQAQEHKTAFSPEQSITA 245

Query: 692  LERALLAVESENGRKRVXXXXXXXXXXXXXXXXGPAADEVI-VPVVRMQTGEVAESSVVA 516
            LE+AL   E+E  R+RV                    DE++ VPVVRM  GEVAES+VVA
Sbjct: 246  LEKALEMAETEKARQRVLRDLEAKDGDGKEEVN---PDELVKVPVVRMAYGEVAESTVVA 302

Query: 515  VLPVCRAQ-XXXXXXXEAPWECAGVGDFGVVEAEKGWSRWVVLPGWKPLAGLKRGGVAVA 339
            V PVC           +APWEC   G FG+V+AEKGWSRWVVLPGW P+AGLKRGGVAVA
Sbjct: 303  VFPVCSGDAGGEIEVGDAPWECRTRGSFGIVKAEKGWSRWVVLPGWGPVAGLKRGGVAVA 362

Query: 338  F-KSARVLPWRGNKWSREETILVVADRGRKEVVTDDNFYLVVGGGNGSAQEGLKVEKGLE 162
            F K+  VLPW+G +    E ILVVADRGRK V  D+ FYLV GGG    +EGLKVE+G +
Sbjct: 363  FSKAGGVLPWKGKRRDANEEILVVADRGRKVVEYDEGFYLVSGGG----KEGLKVERGDK 418

Query: 161  LKEIGVKESLGTVVLVVRPPREDYDDHLSDEDWE 60
            LK  G+  +LG VVLVVRPPR+D D+ LSD +WE
Sbjct: 419  LKGKGMVNTLGAVVLVVRPPRDDNDNTLSDVEWE 452


>ref|XP_011038528.1| PREDICTED: rubisco accumulation factor 1, chloroplastic [Populus
            euphratica]
          Length = 451

 Score =  391 bits (1004), Expect = e-106
 Identities = 228/454 (50%), Positives = 269/454 (59%), Gaps = 13/454 (2%)
 Frame = -1

Query: 1382 NTAKPLSLSTPFLPSHSFXXXXXXXXXXXXXPHSKRPN------SIVALIIPPKSTAQLQ 1221
            NT KPL LS+    S  F               SK P       S+ A  IP       Q
Sbjct: 7    NTHKPLFLSSS--NSKPFSSPFLSQQPLFILHSSKTPFKPTKTLSVSATRIPSSPPPSNQ 64

Query: 1220 QVYQXXXXXXXXXXPQYRNLDTNGRLEILSNRLGLWFEYAPLVSSLLQEGFTPATLEEIT 1041
            Q+YQ           QY++LD   RLEIL+NRLGLW+EYAPL+ SL QEGFTP ++EE T
Sbjct: 65   QLYQPFRPPPSPIPSQYKSLDAPSRLEILANRLGLWYEYAPLIPSLFQEGFTPPSIEEAT 124

Query: 1040 GIXXXXXXXXXXXXX-------SEVDPDILSFFDTSGAELLYEIXXXXXXXXXXXAEYIV 882
            GI                    S  DP+I++ FD  GAELLYEI           A YIV
Sbjct: 125  GISGVEQNRLVVGAQVRDSLVQSNTDPEIVASFDLGGAELLYEIRLLSATQRSAAARYIV 184

Query: 881  LNRFDAKMSLELARAMKDKPRRRGDKGWESFDDDLPGDCLAFVYFRLAQEHTTASSPEMR 702
            LN+ DAK + +LARAMKD PRRRGDK WESF+  LPGDCL+F+Y+R ++EH   S  E R
Sbjct: 185  LNKMDAKGAQDLARAMKDFPRRRGDKYWESFEYVLPGDCLSFMYYRQSREHKNPS--ESR 242

Query: 701  RIALERALLAVESENGRKRVXXXXXXXXXXXXXXXXGPAADEVIVPVVRMQTGEVAESSV 522
              AL+ AL   ESE  +  +                   AD V VPVVR++ GEVAE+S 
Sbjct: 243  TNALQMALEVAESEKAKSAILKELEGGERKERAEGE--TADGVRVPVVRLKIGEVAEASS 300

Query: 521  VAVLPVCRAQXXXXXXXEAPWECAGVGDFGVVEAEKGWSRWVVLPGWKPLAGLKRGGVAV 342
            V VLPVCR++       EAPWEC G G+FGVV AEK W RWVVLPGW+P+ GL RGGVAV
Sbjct: 301  VVVLPVCRSEDGERKIVEAPWECKGQGEFGVVVAEKAWERWVVLPGWEPVLGLGRGGVAV 360

Query: 341  AFKSARVLPWRGNKWSREETILVVADRGRKEVVTDDNFYLVVGGGNGSAQEGLKVEKGLE 162
            AF  AR+LPW+ N+W +EE+ILVVADRG KEV  DD FYLV   G G      KVE+G  
Sbjct: 361  AFPDARILPWKANRWYKEESILVVADRGSKEVKADDGFYLVTLDGAGG---DFKVERGSA 417

Query: 161  LKEIGVKESLGTVVLVVRPPREDYDDHLSDEDWE 60
            LKE  V E LGTV+LVVRPPR + DD LSDEDWE
Sbjct: 418  LKERNVVECLGTVLLVVRPPRYETDDQLSDEDWE 451


>ref|XP_012463925.1| PREDICTED: rubisco accumulation factor 1, chloroplastic-like
            [Gossypium raimondii]
          Length = 445

 Score =  390 bits (1002), Expect = e-105
 Identities = 220/415 (53%), Positives = 263/415 (63%), Gaps = 13/415 (3%)
 Frame = -1

Query: 1265 IVALIIPPKSTAQLQQVYQXXXXXXXXXXPQYRNLDTNGRLEILSNRLGLWFEYAPLVSS 1086
            I A +IP     Q QQ+YQ          P++R+LD  GRL++L+NR GLWFEYAPL+ S
Sbjct: 45   ISATLIPSTPPPQQQQLYQPFRPPPSPLPPKFRSLDAQGRLDVLANRNGLWFEYAPLIPS 104

Query: 1085 LLQEGFTPATLEEITGIXXXXXXXXXXXXX-------SEVDPDILSFFDTSGAELLYEIX 927
            L QEGF+P ++EEITGI                    S+ D D++SFFDT GAELLYEI 
Sbjct: 105  LYQEGFSPPSIEEITGITGVEQNRLIVASQVRESLIQSKTDEDVMSFFDTGGAELLYEIR 164

Query: 926  XXXXXXXXXXAEYIVLNRFDAKMSLELARAMKDKPRRRGDKGWESFDDDLPGDCLAFVYF 747
                        YIV N  DAK + +LARAMKD PRR+ DKGW+SF+  LPGDCL+F+Y+
Sbjct: 165  LLSASQRAEAVRYIVENGLDAKGAQDLARAMKDFPRRKMDKGWKSFEYGLPGDCLSFMYY 224

Query: 746  RLAQEHTTASSPEMRRIALERALLAVESENGRKRVXXXXXXXXXXXXXXXXGPAADE--- 576
            RL++EH   S  E R  AL +AL   ESE+ +K V                 P  D+   
Sbjct: 225  RLSREHGNPS--EQRTAALMQALQVAESESAKKEVSEELEGGEDEK------PEKDDDLE 276

Query: 575  --VIVPVVRMQTGEVAESSVVAVLPVCRAQXXXXXXXEAPWECAGVGDFGVVEAEKGWSR 402
              V VPVVRMQ GEVAE++ V VLPVC A+       EAP EC   GDFGVVEAEKGW R
Sbjct: 277  YRVRVPVVRMQFGEVAEATSVVVLPVCMAEEDTKELLEAPLECRSGGDFGVVEAEKGWKR 336

Query: 401  WVVLPGWKPLAGLKRGGVAVAFKSARVLPWRGNKWSREETILVVADRGRKEVVTDDNFYL 222
            WVVLP W+PLAGL+ GGV VAF  ARV+ W+ N+W +EE ILVV DR RKEV  D  FYL
Sbjct: 337  WVVLPSWEPLAGLRHGGVVVAFSDARVIQWKSNRWYKEEAILVVTDRNRKEVEVDAAFYL 396

Query: 221  -VVGGGNGSAQEGLKVEKGLELKEIGVKESLGTVVLVVRPPREDYDDHLSDEDWE 60
             +V GG      GLKV+ G  LKE+GVKESLGTVVLVVRPP+E+ DD LSDEDWE
Sbjct: 397  AMVDGG------GLKVDTGSALKEMGVKESLGTVVLVVRPPKEESDDQLSDEDWE 445


>gb|KJB80888.1| hypothetical protein B456_013G120100 [Gossypium raimondii]
          Length = 581

 Score =  390 bits (1002), Expect = e-105
 Identities = 220/415 (53%), Positives = 263/415 (63%), Gaps = 13/415 (3%)
 Frame = -1

Query: 1265 IVALIIPPKSTAQLQQVYQXXXXXXXXXXPQYRNLDTNGRLEILSNRLGLWFEYAPLVSS 1086
            I A +IP     Q QQ+YQ          P++R+LD  GRL++L+NR GLWFEYAPL+ S
Sbjct: 181  ISATLIPSTPPPQQQQLYQPFRPPPSPLPPKFRSLDAQGRLDVLANRNGLWFEYAPLIPS 240

Query: 1085 LLQEGFTPATLEEITGIXXXXXXXXXXXXX-------SEVDPDILSFFDTSGAELLYEIX 927
            L QEGF+P ++EEITGI                    S+ D D++SFFDT GAELLYEI 
Sbjct: 241  LYQEGFSPPSIEEITGITGVEQNRLIVASQVRESLIQSKTDEDVMSFFDTGGAELLYEIR 300

Query: 926  XXXXXXXXXXAEYIVLNRFDAKMSLELARAMKDKPRRRGDKGWESFDDDLPGDCLAFVYF 747
                        YIV N  DAK + +LARAMKD PRR+ DKGW+SF+  LPGDCL+F+Y+
Sbjct: 301  LLSASQRAEAVRYIVENGLDAKGAQDLARAMKDFPRRKMDKGWKSFEYGLPGDCLSFMYY 360

Query: 746  RLAQEHTTASSPEMRRIALERALLAVESENGRKRVXXXXXXXXXXXXXXXXGPAADE--- 576
            RL++EH   S  E R  AL +AL   ESE+ +K V                 P  D+   
Sbjct: 361  RLSREHGNPS--EQRTAALMQALQVAESESAKKEVSEELEGGEDEK------PEKDDDLE 412

Query: 575  --VIVPVVRMQTGEVAESSVVAVLPVCRAQXXXXXXXEAPWECAGVGDFGVVEAEKGWSR 402
              V VPVVRMQ GEVAE++ V VLPVC A+       EAP EC   GDFGVVEAEKGW R
Sbjct: 413  YRVRVPVVRMQFGEVAEATSVVVLPVCMAEEDTKELLEAPLECRSGGDFGVVEAEKGWKR 472

Query: 401  WVVLPGWKPLAGLKRGGVAVAFKSARVLPWRGNKWSREETILVVADRGRKEVVTDDNFYL 222
            WVVLP W+PLAGL+ GGV VAF  ARV+ W+ N+W +EE ILVV DR RKEV  D  FYL
Sbjct: 473  WVVLPSWEPLAGLRHGGVVVAFSDARVIQWKSNRWYKEEAILVVTDRNRKEVEVDAAFYL 532

Query: 221  -VVGGGNGSAQEGLKVEKGLELKEIGVKESLGTVVLVVRPPREDYDDHLSDEDWE 60
             +V GG      GLKV+ G  LKE+GVKESLGTVVLVVRPP+E+ DD LSDEDWE
Sbjct: 533  AMVDGG------GLKVDTGSALKEMGVKESLGTVVLVVRPPKEESDDQLSDEDWE 581


>ref|XP_002268548.1| PREDICTED: rubisco accumulation factor 1, chloroplastic [Vitis
            vinifera]
          Length = 443

 Score =  389 bits (1000), Expect = e-105
 Identities = 224/415 (53%), Positives = 264/415 (63%), Gaps = 13/415 (3%)
 Frame = -1

Query: 1265 IVALIIPPKST---AQLQQVYQXXXXXXXXXXP--QYRNLDTNGRLEILSNRLGLWFEYA 1101
            I A IIP  ST   +Q  ++YQ              +R+LDT  RLE+LSNRLGLWFEYA
Sbjct: 34   ISATIIPSSSTPRHSQQPELYQPFRPPSPNAPIPSHFRSLDTGSRLEVLSNRLGLWFEYA 93

Query: 1100 PLVSSLLQEGFTPATLEEITGIXXXXXXXXXXXXX-------SEVDPDILSFFDTSGAEL 942
            PLVS+L+QEGFTP++LEE TGI                    S +DP ILSFFD  G  L
Sbjct: 94   PLVSTLMQEGFTPSSLEEATGISGVEQNRLVVAAQVRHSLLQSGLDPQILSFFDNGGDSL 153

Query: 941  LYEIXXXXXXXXXXXAEYIVLNRFDAKMSLELARAMKDKPRRRGDKGWESFDDDLPGDCL 762
            LYEI           A Y+V NR D + + ELARA+KD PRRRGD+GWE FD ++PGDCL
Sbjct: 154  LYEIRLLSARERLAAARYVVENRVDPRGAQELARAIKDFPRRRGDRGWECFDYNVPGDCL 213

Query: 761  AFVYFRLAQEHTTASSPEMRRIALERALLAVESENGRKRVXXXXXXXXXXXXXXXXGPAA 582
            AF+Y+R ++EH   +S + RR ALE+AL   E+E  ++ +                   A
Sbjct: 214  AFMYYRQSREH--RNSLDKRRAALEKALEVAETEKAKRVLLEELERNDDADDGKSEIEGA 271

Query: 581  DEVIVPVVRMQTGEVAESSVVAVLPVCRAQXXXXXXXEAPWECAGVGDFGVVEAEKGWSR 402
              V VPVVRM+TGEVAE++ V VLPVC AQ        AP EC   G+FGVV AEKGW R
Sbjct: 272  --VRVPVVRMKTGEVAEATTVVVLPVCEAQEGVDVVLGAPLECRSQGEFGVVVAEKGWKR 329

Query: 401  WVVLPGWKPLAGLKRGGVAVAFKSARVLPWRGNKWSREETILVVADRGRKEVVTDDNFYL 222
            WVVLPGW+P+AGL R GV VAF  AR LPWR N+W +EE ILVVA+RG KEVV D  FYL
Sbjct: 330  WVVLPGWEPVAGL-RAGVVVAFGDARALPWRVNRWYKEEAILVVANRGAKEVVADAGFYL 388

Query: 221  V-VGGGNGSAQEGLKVEKGLELKEIGVKESLGTVVLVVRPPREDYDDHLSDEDWE 60
            V V   NGSA   LKVE+G  LKE GVKESLGTVVLVVRPPRE+ D  L DEDWE
Sbjct: 389  VAVSSDNGSAGGELKVERGSALKERGVKESLGTVVLVVRPPREETDHELRDEDWE 443