BLASTX nr result
ID: Gardenia21_contig00000843
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Gardenia21_contig00000843
(930 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDP09818.1| unnamed protein product [Coffea canephora] 546 e-153
ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV su... 388 e-105
ref|XP_010661369.1| PREDICTED: DNA-directed RNA polymerase IV su... 388 e-105
ref|XP_010661365.1| PREDICTED: DNA-directed RNA polymerase IV su... 388 e-105
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera] 388 e-105
ref|XP_009797468.1| PREDICTED: DNA-directed RNA polymerase IV su... 387 e-105
ref|XP_009797463.1| PREDICTED: DNA-directed RNA polymerase IV su... 387 e-105
ref|XP_009593318.1| PREDICTED: DNA-directed RNA polymerase IV su... 386 e-104
ref|XP_009593317.1| PREDICTED: DNA-directed RNA polymerase IV su... 386 e-104
ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV su... 385 e-104
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su... 385 e-104
ref|XP_010325436.1| PREDICTED: DNA-directed RNA polymerase IV su... 381 e-103
ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase IV su... 381 e-103
gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycope... 381 e-103
ref|XP_012476049.1| PREDICTED: DNA-directed RNA polymerase IV su... 378 e-102
ref|XP_012476048.1| PREDICTED: DNA-directed RNA polymerase IV su... 378 e-102
gb|KJB25756.1| hypothetical protein B456_004G207300 [Gossypium r... 378 e-102
ref|XP_012476045.1| PREDICTED: DNA-directed RNA polymerase IV su... 378 e-102
ref|XP_011081158.1| PREDICTED: DNA-directed RNA polymerase IV su... 372 e-100
ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-... 372 e-100
>emb|CDP09818.1| unnamed protein product [Coffea canephora]
Length = 1511
Score = 546 bits (1407), Expect = e-153
Identities = 277/309 (89%), Positives = 286/309 (92%)
Frame = -3
Query: 928 DCLHGYVPQSVDSRVELNELVALNKQLLNGQSGRNLLSLSHDSLTAAHLILEDGVTLNKL 749
DCLHGYV QSVDSRVELNELVALNKQLLNGQSGRNLLSLSHDSLTAAHLILEDGVTL+K
Sbjct: 493 DCLHGYVSQSVDSRVELNELVALNKQLLNGQSGRNLLSLSHDSLTAAHLILEDGVTLDKF 552
Query: 748 QMQQLQMFCSCSIPIPAITKTPENKCFWTGKQLFSLLIPPCFDYVSQSNGLQISKGEIVT 569
QMQQLQMFCSC +PIPAITK P NKCFWTGKQLFSLLIPPCFDYVSQSNG+QISKGEIVT
Sbjct: 553 QMQQLQMFCSCPMPIPAITKAPGNKCFWTGKQLFSLLIPPCFDYVSQSNGVQISKGEIVT 612
Query: 568 SSIGSSWLRDNDGNLVHGLVKYCKNEVLGFLCAAQEVLCEWLATRGLSVSLSDLYLTPDT 389
SS GSSWLRDNDGNL H LV+ CKNEVLGFLCAAQEVLCEWLA RGLSVSLSDLYLT D
Sbjct: 613 SSSGSSWLRDNDGNLFHSLVRCCKNEVLGFLCAAQEVLCEWLAMRGLSVSLSDLYLTSDA 672
Query: 388 CSRQNMIEEVSCGLQEAELLSSFRLLMVDSNQDFLVESIEANKSGVDFGVERLSSIQQQN 209
SRQNMIEEVSCGLQEAELLSS RLLM+ SNQDFLVES EANK VDFG + LSSIQQQN
Sbjct: 673 YSRQNMIEEVSCGLQEAELLSSIRLLMMGSNQDFLVESTEANKRSVDFGEQHLSSIQQQN 732
Query: 208 SSVLSQASVSAFKQVFLDIQHLVYQYVSKENSFLSMLKAGSKGNLLKLVQQSMCLGLQHS 29
SSVLS+ASVSAFKQVFLD+QHLVY YVSK+NSFLSML AGSKGNLLKLVQ SMCLGLQHS
Sbjct: 733 SSVLSEASVSAFKQVFLDVQHLVYHYVSKDNSFLSMLMAGSKGNLLKLVQHSMCLGLQHS 792
Query: 28 VVPLSFSIP 2
VVPLSFSIP
Sbjct: 793 VVPLSFSIP 801
>ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X3 [Vitis
vinifera]
Length = 1354
Score = 388 bits (996), Expect = e-105
Identities = 202/310 (65%), Positives = 247/310 (79%), Gaps = 1/310 (0%)
Frame = -3
Query: 928 DCLHGYVPQSVDSRVELNELVALNKQLLNGQSGRNLLSLSHDSLTAAHLILEDGVTLNKL 749
DCLHGY+PQSVDSRVEL+ELVALN+QL+N QSGRNLLSLS DSL+AAHL++EDGV LN
Sbjct: 347 DCLHGYIPQSVDSRVELSELVALNRQLINRQSGRNLLSLSQDSLSAAHLVMEDGVLLNLF 406
Query: 748 QMQQLQMFCSCSIPIPAITKTPE-NKCFWTGKQLFSLLIPPCFDYVSQSNGLQISKGEIV 572
QMQQL+MFC + PAI K P + WTGKQLFS+L+PP F+YV NG++IS GE++
Sbjct: 407 QMQQLEMFCPYQLQSPAIIKAPLLDTQVWTGKQLFSMLLPPGFNYVFPLNGVRISDGELI 466
Query: 571 TSSIGSSWLRDNDGNLVHGLVKYCKNEVLGFLCAAQEVLCEWLATRGLSVSLSDLYLTPD 392
+SS GS+WLRD DGNL LVK C+ + L FL AAQEVLCEWL+ RGLSVSLSD+YL+ D
Sbjct: 467 SSSDGSAWLRDIDGNLFSSLVKDCQGKALDFLYAAQEVLCEWLSMRGLSVSLSDIYLSSD 526
Query: 391 TCSRQNMIEEVSCGLQEAELLSSFRLLMVDSNQDFLVESIEANKSGVDFGVERLSSIQQQ 212
+ SR+NMI+EV CGL AE F+ L+VDS+Q+FL+ S E N++GV V+ L ++Q
Sbjct: 527 SISRKNMIDEVFCGLLVAEQTCHFKQLLVDSSQNFLIGSGENNQNGVVPDVQSL-WYERQ 585
Query: 211 NSSVLSQASVSAFKQVFLDIQHLVYQYVSKENSFLSMLKAGSKGNLLKLVQQSMCLGLQH 32
S+ L Q+SV AFKQ F DIQ+LVYQY +K+NS L+MLKAGSKGNLLKLVQQ +CLGLQH
Sbjct: 586 GSAALCQSSVCAFKQKFRDIQNLVYQYANKDNSLLAMLKAGSKGNLLKLVQQGLCLGLQH 645
Query: 31 SVVPLSFSIP 2
S+VPLSF IP
Sbjct: 646 SLVPLSFKIP 655
>ref|XP_010661369.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2 [Vitis
vinifera]
Length = 1458
Score = 388 bits (996), Expect = e-105
Identities = 202/310 (65%), Positives = 247/310 (79%), Gaps = 1/310 (0%)
Frame = -3
Query: 928 DCLHGYVPQSVDSRVELNELVALNKQLLNGQSGRNLLSLSHDSLTAAHLILEDGVTLNKL 749
DCLHGY+PQSVDSRVEL+ELVALN+QL+N QSGRNLLSLS DSL+AAHL++EDGV LN
Sbjct: 453 DCLHGYIPQSVDSRVELSELVALNRQLINRQSGRNLLSLSQDSLSAAHLVMEDGVLLNLF 512
Query: 748 QMQQLQMFCSCSIPIPAITKTPE-NKCFWTGKQLFSLLIPPCFDYVSQSNGLQISKGEIV 572
QMQQL+MFC + PAI K P + WTGKQLFS+L+PP F+YV NG++IS GE++
Sbjct: 513 QMQQLEMFCPYQLQSPAIIKAPLLDTQVWTGKQLFSMLLPPGFNYVFPLNGVRISDGELI 572
Query: 571 TSSIGSSWLRDNDGNLVHGLVKYCKNEVLGFLCAAQEVLCEWLATRGLSVSLSDLYLTPD 392
+SS GS+WLRD DGNL LVK C+ + L FL AAQEVLCEWL+ RGLSVSLSD+YL+ D
Sbjct: 573 SSSDGSAWLRDIDGNLFSSLVKDCQGKALDFLYAAQEVLCEWLSMRGLSVSLSDIYLSSD 632
Query: 391 TCSRQNMIEEVSCGLQEAELLSSFRLLMVDSNQDFLVESIEANKSGVDFGVERLSSIQQQ 212
+ SR+NMI+EV CGL AE F+ L+VDS+Q+FL+ S E N++GV V+ L ++Q
Sbjct: 633 SISRKNMIDEVFCGLLVAEQTCHFKQLLVDSSQNFLIGSGENNQNGVVPDVQSL-WYERQ 691
Query: 211 NSSVLSQASVSAFKQVFLDIQHLVYQYVSKENSFLSMLKAGSKGNLLKLVQQSMCLGLQH 32
S+ L Q+SV AFKQ F DIQ+LVYQY +K+NS L+MLKAGSKGNLLKLVQQ +CLGLQH
Sbjct: 692 GSAALCQSSVCAFKQKFRDIQNLVYQYANKDNSLLAMLKAGSKGNLLKLVQQGLCLGLQH 751
Query: 31 SVVPLSFSIP 2
S+VPLSF IP
Sbjct: 752 SLVPLSFKIP 761
>ref|XP_010661365.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1 [Vitis
vinifera]
Length = 1460
Score = 388 bits (996), Expect = e-105
Identities = 202/310 (65%), Positives = 247/310 (79%), Gaps = 1/310 (0%)
Frame = -3
Query: 928 DCLHGYVPQSVDSRVELNELVALNKQLLNGQSGRNLLSLSHDSLTAAHLILEDGVTLNKL 749
DCLHGY+PQSVDSRVEL+ELVALN+QL+N QSGRNLLSLS DSL+AAHL++EDGV LN
Sbjct: 453 DCLHGYIPQSVDSRVELSELVALNRQLINRQSGRNLLSLSQDSLSAAHLVMEDGVLLNLF 512
Query: 748 QMQQLQMFCSCSIPIPAITKTPE-NKCFWTGKQLFSLLIPPCFDYVSQSNGLQISKGEIV 572
QMQQL+MFC + PAI K P + WTGKQLFS+L+PP F+YV NG++IS GE++
Sbjct: 513 QMQQLEMFCPYQLQSPAIIKAPLLDTQVWTGKQLFSMLLPPGFNYVFPLNGVRISDGELI 572
Query: 571 TSSIGSSWLRDNDGNLVHGLVKYCKNEVLGFLCAAQEVLCEWLATRGLSVSLSDLYLTPD 392
+SS GS+WLRD DGNL LVK C+ + L FL AAQEVLCEWL+ RGLSVSLSD+YL+ D
Sbjct: 573 SSSDGSAWLRDIDGNLFSSLVKDCQGKALDFLYAAQEVLCEWLSMRGLSVSLSDIYLSSD 632
Query: 391 TCSRQNMIEEVSCGLQEAELLSSFRLLMVDSNQDFLVESIEANKSGVDFGVERLSSIQQQ 212
+ SR+NMI+EV CGL AE F+ L+VDS+Q+FL+ S E N++GV V+ L ++Q
Sbjct: 633 SISRKNMIDEVFCGLLVAEQTCHFKQLLVDSSQNFLIGSGENNQNGVVPDVQSL-WYERQ 691
Query: 211 NSSVLSQASVSAFKQVFLDIQHLVYQYVSKENSFLSMLKAGSKGNLLKLVQQSMCLGLQH 32
S+ L Q+SV AFKQ F DIQ+LVYQY +K+NS L+MLKAGSKGNLLKLVQQ +CLGLQH
Sbjct: 692 GSAALCQSSVCAFKQKFRDIQNLVYQYANKDNSLLAMLKAGSKGNLLKLVQQGLCLGLQH 751
Query: 31 SVVPLSFSIP 2
S+VPLSF IP
Sbjct: 752 SLVPLSFKIP 761
>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
Length = 1393
Score = 388 bits (996), Expect = e-105
Identities = 202/310 (65%), Positives = 247/310 (79%), Gaps = 1/310 (0%)
Frame = -3
Query: 928 DCLHGYVPQSVDSRVELNELVALNKQLLNGQSGRNLLSLSHDSLTAAHLILEDGVTLNKL 749
DCLHGY+PQSVDSRVEL+ELVALN+QL+N QSGRNLLSLS DSL+AAHL++EDGV LN
Sbjct: 456 DCLHGYIPQSVDSRVELSELVALNRQLINRQSGRNLLSLSQDSLSAAHLVMEDGVLLNLF 515
Query: 748 QMQQLQMFCSCSIPIPAITKTPE-NKCFWTGKQLFSLLIPPCFDYVSQSNGLQISKGEIV 572
QMQQL+MFC + PAI K P + WTGKQLFS+L+PP F+YV NG++IS GE++
Sbjct: 516 QMQQLEMFCPYQLQSPAIIKAPLLDTQVWTGKQLFSMLLPPGFNYVFPLNGVRISDGELI 575
Query: 571 TSSIGSSWLRDNDGNLVHGLVKYCKNEVLGFLCAAQEVLCEWLATRGLSVSLSDLYLTPD 392
+SS GS+WLRD DGNL LVK C+ + L FL AAQEVLCEWL+ RGLSVSLSD+YL+ D
Sbjct: 576 SSSDGSAWLRDIDGNLFSSLVKDCQGKALDFLYAAQEVLCEWLSMRGLSVSLSDIYLSSD 635
Query: 391 TCSRQNMIEEVSCGLQEAELLSSFRLLMVDSNQDFLVESIEANKSGVDFGVERLSSIQQQ 212
+ SR+NMI+EV CGL AE F+ L+VDS+Q+FL+ S E N++GV V+ L ++Q
Sbjct: 636 SISRKNMIDEVFCGLLVAEQTCHFKQLLVDSSQNFLIGSGENNQNGVVPDVQSL-WYERQ 694
Query: 211 NSSVLSQASVSAFKQVFLDIQHLVYQYVSKENSFLSMLKAGSKGNLLKLVQQSMCLGLQH 32
S+ L Q+SV AFKQ F DIQ+LVYQY +K+NS L+MLKAGSKGNLLKLVQQ +CLGLQH
Sbjct: 695 GSAALCQSSVCAFKQKFRDIQNLVYQYANKDNSLLAMLKAGSKGNLLKLVQQGLCLGLQH 754
Query: 31 SVVPLSFSIP 2
S+VPLSF IP
Sbjct: 755 SLVPLSFKIP 764
>ref|XP_009797468.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Nicotiana sylvestris]
Length = 1254
Score = 387 bits (994), Expect = e-105
Identities = 205/310 (66%), Positives = 241/310 (77%), Gaps = 1/310 (0%)
Frame = -3
Query: 928 DCLHGYVPQSVDSRVELNELVALNKQLLNGQSGRNLLSLSHDSLTAAHLILEDGVTLNKL 749
DCLHGYVPQS+DSRVEL+ELV LN+QL++GQSG+NLLSLSHDSLTAAHLILE+GV L++
Sbjct: 242 DCLHGYVPQSIDSRVELSELVGLNRQLIDGQSGQNLLSLSHDSLTAAHLILEEGVFLDRF 301
Query: 748 QMQQLQMFCSCSIPIPAITKTPE-NKCFWTGKQLFSLLIPPCFDYVSQSNGLQISKGEIV 572
QMQQLQMFC + +PAI + P N+ +WTGKQLF L +P D SNG+ IS GEIV
Sbjct: 302 QMQQLQMFCPHQVGMPAIVRAPSRNRSYWTGKQLFGLFLPSDLDCDFPSNGVCISDGEIV 361
Query: 571 TSSIGSSWLRDNDGNLVHGLVKYCKNEVLGFLCAAQEVLCEWLATRGLSVSLSDLYLTPD 392
TSS GSSWLRD NL + LVK+ + L L AAQ VLCEWL+ RGLSVSLSDLY++ D
Sbjct: 362 TSSGGSSWLRDASENLFYSLVKHHGGDTLDLLYAAQAVLCEWLSMRGLSVSLSDLYISSD 421
Query: 391 TCSRQNMIEEVSCGLQEAELLSSFRLLMVDSNQDFLVESIEANKSGVDFGVERLSSIQQQ 212
SR+NMI+EV CGLQEAE LS +LLM N DFL S+E ++ + F +E SI Q
Sbjct: 422 PYSRENMIDEVFCGLQEAERLSYVQLLMTRYNHDFLAGSLEVSQKAMGFDLE-FMSIMLQ 480
Query: 211 NSSVLSQASVSAFKQVFLDIQHLVYQYVSKENSFLSMLKAGSKGNLLKLVQQSMCLGLQH 32
S+ LSQASV+AFKQVF DIQ+LVY Y SKENSFL+MLKAGSKGNLLKLVQ SMCLGLQ
Sbjct: 481 KSASLSQASVTAFKQVFRDIQNLVYNYASKENSFLAMLKAGSKGNLLKLVQHSMCLGLQQ 540
Query: 31 SVVPLSFSIP 2
S+VPLSF +P
Sbjct: 541 SLVPLSFRMP 550
>ref|XP_009797463.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Nicotiana sylvestris] gi|698503797|ref|XP_009797464.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1
isoform X1 [Nicotiana sylvestris]
gi|698503800|ref|XP_009797465.1| PREDICTED: DNA-directed
RNA polymerase IV subunit 1 isoform X1 [Nicotiana
sylvestris] gi|698503802|ref|XP_009797466.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 isoform X1
[Nicotiana sylvestris] gi|698503804|ref|XP_009797467.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1
isoform X1 [Nicotiana sylvestris]
Length = 1447
Score = 387 bits (994), Expect = e-105
Identities = 205/310 (66%), Positives = 241/310 (77%), Gaps = 1/310 (0%)
Frame = -3
Query: 928 DCLHGYVPQSVDSRVELNELVALNKQLLNGQSGRNLLSLSHDSLTAAHLILEDGVTLNKL 749
DCLHGYVPQS+DSRVEL+ELV LN+QL++GQSG+NLLSLSHDSLTAAHLILE+GV L++
Sbjct: 435 DCLHGYVPQSIDSRVELSELVGLNRQLIDGQSGQNLLSLSHDSLTAAHLILEEGVFLDRF 494
Query: 748 QMQQLQMFCSCSIPIPAITKTPE-NKCFWTGKQLFSLLIPPCFDYVSQSNGLQISKGEIV 572
QMQQLQMFC + +PAI + P N+ +WTGKQLF L +P D SNG+ IS GEIV
Sbjct: 495 QMQQLQMFCPHQVGMPAIVRAPSRNRSYWTGKQLFGLFLPSDLDCDFPSNGVCISDGEIV 554
Query: 571 TSSIGSSWLRDNDGNLVHGLVKYCKNEVLGFLCAAQEVLCEWLATRGLSVSLSDLYLTPD 392
TSS GSSWLRD NL + LVK+ + L L AAQ VLCEWL+ RGLSVSLSDLY++ D
Sbjct: 555 TSSGGSSWLRDASENLFYSLVKHHGGDTLDLLYAAQAVLCEWLSMRGLSVSLSDLYISSD 614
Query: 391 TCSRQNMIEEVSCGLQEAELLSSFRLLMVDSNQDFLVESIEANKSGVDFGVERLSSIQQQ 212
SR+NMI+EV CGLQEAE LS +LLM N DFL S+E ++ + F +E SI Q
Sbjct: 615 PYSRENMIDEVFCGLQEAERLSYVQLLMTRYNHDFLAGSLEVSQKAMGFDLE-FMSIMLQ 673
Query: 211 NSSVLSQASVSAFKQVFLDIQHLVYQYVSKENSFLSMLKAGSKGNLLKLVQQSMCLGLQH 32
S+ LSQASV+AFKQVF DIQ+LVY Y SKENSFL+MLKAGSKGNLLKLVQ SMCLGLQ
Sbjct: 674 KSASLSQASVTAFKQVFRDIQNLVYNYASKENSFLAMLKAGSKGNLLKLVQHSMCLGLQQ 733
Query: 31 SVVPLSFSIP 2
S+VPLSF +P
Sbjct: 734 SLVPLSFRMP 743
>ref|XP_009593318.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Nicotiana tomentosiformis]
Length = 1211
Score = 386 bits (992), Expect = e-104
Identities = 204/310 (65%), Positives = 241/310 (77%), Gaps = 1/310 (0%)
Frame = -3
Query: 928 DCLHGYVPQSVDSRVELNELVALNKQLLNGQSGRNLLSLSHDSLTAAHLILEDGVTLNKL 749
DCLHGYVPQS+DSRVEL+ELV LN+QL++GQSG+NLLSLSHDSLTAAHL+LE GV L++
Sbjct: 199 DCLHGYVPQSIDSRVELSELVGLNRQLIDGQSGQNLLSLSHDSLTAAHLVLEGGVFLDRF 258
Query: 748 QMQQLQMFCSCSIPIPAITKTPE-NKCFWTGKQLFSLLIPPCFDYVSQSNGLQISKGEIV 572
Q+QQLQMFC + +PAI + P N+ +WTGKQLFSL +P D SNG+ IS GEIV
Sbjct: 259 QVQQLQMFCPHQVGMPAIVRAPSRNRSYWTGKQLFSLFLPSDLDCDFPSNGVCISDGEIV 318
Query: 571 TSSIGSSWLRDNDGNLVHGLVKYCKNEVLGFLCAAQEVLCEWLATRGLSVSLSDLYLTPD 392
TSS GSSWLRD NL + LVK+ + L L AAQ VLCEWL+ RGLSVSLSDLY++ D
Sbjct: 319 TSSGGSSWLRDASENLFYSLVKHHGGDTLDLLYAAQAVLCEWLSMRGLSVSLSDLYISSD 378
Query: 391 TCSRQNMIEEVSCGLQEAELLSSFRLLMVDSNQDFLVESIEANKSGVDFGVERLSSIQQQ 212
SR+NMI+EV CGLQEAE LS +LLM N DFL S+E ++ + F +E SI QQ
Sbjct: 379 PYSRENMIDEVFCGLQEAERLSYIQLLMSRYNHDFLAGSLEVSQKAMGFNLE-FMSIMQQ 437
Query: 211 NSSVLSQASVSAFKQVFLDIQHLVYQYVSKENSFLSMLKAGSKGNLLKLVQQSMCLGLQH 32
S+ LSQASVS+FK VF DIQ+LVY Y SKENSFL+MLKAGSKGNLLKLVQ SMCLGLQ
Sbjct: 438 KSASLSQASVSSFKHVFRDIQNLVYNYASKENSFLAMLKAGSKGNLLKLVQHSMCLGLQQ 497
Query: 31 SVVPLSFSIP 2
S+VPLSF +P
Sbjct: 498 SLVPLSFRMP 507
>ref|XP_009593317.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Nicotiana tomentosiformis]
Length = 1447
Score = 386 bits (992), Expect = e-104
Identities = 204/310 (65%), Positives = 241/310 (77%), Gaps = 1/310 (0%)
Frame = -3
Query: 928 DCLHGYVPQSVDSRVELNELVALNKQLLNGQSGRNLLSLSHDSLTAAHLILEDGVTLNKL 749
DCLHGYVPQS+DSRVEL+ELV LN+QL++GQSG+NLLSLSHDSLTAAHL+LE GV L++
Sbjct: 435 DCLHGYVPQSIDSRVELSELVGLNRQLIDGQSGQNLLSLSHDSLTAAHLVLEGGVFLDRF 494
Query: 748 QMQQLQMFCSCSIPIPAITKTPE-NKCFWTGKQLFSLLIPPCFDYVSQSNGLQISKGEIV 572
Q+QQLQMFC + +PAI + P N+ +WTGKQLFSL +P D SNG+ IS GEIV
Sbjct: 495 QVQQLQMFCPHQVGMPAIVRAPSRNRSYWTGKQLFSLFLPSDLDCDFPSNGVCISDGEIV 554
Query: 571 TSSIGSSWLRDNDGNLVHGLVKYCKNEVLGFLCAAQEVLCEWLATRGLSVSLSDLYLTPD 392
TSS GSSWLRD NL + LVK+ + L L AAQ VLCEWL+ RGLSVSLSDLY++ D
Sbjct: 555 TSSGGSSWLRDASENLFYSLVKHHGGDTLDLLYAAQAVLCEWLSMRGLSVSLSDLYISSD 614
Query: 391 TCSRQNMIEEVSCGLQEAELLSSFRLLMVDSNQDFLVESIEANKSGVDFGVERLSSIQQQ 212
SR+NMI+EV CGLQEAE LS +LLM N DFL S+E ++ + F +E SI QQ
Sbjct: 615 PYSRENMIDEVFCGLQEAERLSYIQLLMSRYNHDFLAGSLEVSQKAMGFNLE-FMSIMQQ 673
Query: 211 NSSVLSQASVSAFKQVFLDIQHLVYQYVSKENSFLSMLKAGSKGNLLKLVQQSMCLGLQH 32
S+ LSQASVS+FK VF DIQ+LVY Y SKENSFL+MLKAGSKGNLLKLVQ SMCLGLQ
Sbjct: 674 KSASLSQASVSSFKHVFRDIQNLVYNYASKENSFLAMLKAGSKGNLLKLVQHSMCLGLQQ 733
Query: 31 SVVPLSFSIP 2
S+VPLSF +P
Sbjct: 734 SLVPLSFRMP 743
>ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Solanum tuberosum]
Length = 1233
Score = 385 bits (990), Expect = e-104
Identities = 203/310 (65%), Positives = 244/310 (78%), Gaps = 1/310 (0%)
Frame = -3
Query: 928 DCLHGYVPQSVDSRVELNELVALNKQLLNGQSGRNLLSLSHDSLTAAHLILEDGVTLNKL 749
DCLHGY+PQS+DSR+EL+ELVAL +QLL+GQ+G+NLLSLSHDSLTAAHLILE GV L++
Sbjct: 226 DCLHGYIPQSIDSRIELSELVALKQQLLDGQNGQNLLSLSHDSLTAAHLILEPGVFLDRF 285
Query: 748 QMQQLQMFCSCSIPIPAITKTPE-NKCFWTGKQLFSLLIPPCFDYVSQSNGLQISKGEIV 572
QMQQLQMFC + + AI K P N C+WTGKQLFSLL+P +YV SNG+ IS+GEIV
Sbjct: 286 QMQQLQMFCPRQLGMTAIVKAPPGNLCYWTGKQLFSLLLPSDLEYVFPSNGVCISEGEIV 345
Query: 571 TSSIGSSWLRDNDGNLVHGLVKYCKNEVLGFLCAAQEVLCEWLATRGLSVSLSDLYLTPD 392
TSS GSSWLRD NL + LVK+ + L L AAQ VLCEWL+ RGLSVSLSDLY++ D
Sbjct: 346 TSSGGSSWLRDVSDNLFYSLVKHHGGDTLDLLYAAQTVLCEWLSMRGLSVSLSDLYISSD 405
Query: 391 TCSRQNMIEEVSCGLQEAELLSSFRLLMVDSNQDFLVESIEANKSGVDFGVERLSSIQQQ 212
+ SR+NMI+EV GLQEAE LS +LLM+ N+DFL S+E +K+ + F E SI QQ
Sbjct: 406 SYSRENMIDEVCSGLQEAERLSYIQLLMIKYNKDFLSGSLEESKNSMGFDFE-FMSIMQQ 464
Query: 211 NSSVLSQASVSAFKQVFLDIQHLVYQYVSKENSFLSMLKAGSKGNLLKLVQQSMCLGLQH 32
S+ LSQAS SAFK+VF DIQ+LVY Y S +NS L+MLKAGSKGNLLKLVQ SMCLGLQ
Sbjct: 465 KSASLSQASASAFKKVFRDIQNLVYNYASNDNSLLAMLKAGSKGNLLKLVQHSMCLGLQQ 524
Query: 31 SVVPLSFSIP 2
S+VP+SF +P
Sbjct: 525 SLVPVSFRMP 534
>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Solanum tuberosum]
Length = 1446
Score = 385 bits (990), Expect = e-104
Identities = 203/310 (65%), Positives = 244/310 (78%), Gaps = 1/310 (0%)
Frame = -3
Query: 928 DCLHGYVPQSVDSRVELNELVALNKQLLNGQSGRNLLSLSHDSLTAAHLILEDGVTLNKL 749
DCLHGY+PQS+DSR+EL+ELVAL +QLL+GQ+G+NLLSLSHDSLTAAHLILE GV L++
Sbjct: 439 DCLHGYIPQSIDSRIELSELVALKQQLLDGQNGQNLLSLSHDSLTAAHLILEPGVFLDRF 498
Query: 748 QMQQLQMFCSCSIPIPAITKTPE-NKCFWTGKQLFSLLIPPCFDYVSQSNGLQISKGEIV 572
QMQQLQMFC + + AI K P N C+WTGKQLFSLL+P +YV SNG+ IS+GEIV
Sbjct: 499 QMQQLQMFCPRQLGMTAIVKAPPGNLCYWTGKQLFSLLLPSDLEYVFPSNGVCISEGEIV 558
Query: 571 TSSIGSSWLRDNDGNLVHGLVKYCKNEVLGFLCAAQEVLCEWLATRGLSVSLSDLYLTPD 392
TSS GSSWLRD NL + LVK+ + L L AAQ VLCEWL+ RGLSVSLSDLY++ D
Sbjct: 559 TSSGGSSWLRDVSDNLFYSLVKHHGGDTLDLLYAAQTVLCEWLSMRGLSVSLSDLYISSD 618
Query: 391 TCSRQNMIEEVSCGLQEAELLSSFRLLMVDSNQDFLVESIEANKSGVDFGVERLSSIQQQ 212
+ SR+NMI+EV GLQEAE LS +LLM+ N+DFL S+E +K+ + F E SI QQ
Sbjct: 619 SYSRENMIDEVCSGLQEAERLSYIQLLMIKYNKDFLSGSLEESKNSMGFDFE-FMSIMQQ 677
Query: 211 NSSVLSQASVSAFKQVFLDIQHLVYQYVSKENSFLSMLKAGSKGNLLKLVQQSMCLGLQH 32
S+ LSQAS SAFK+VF DIQ+LVY Y S +NS L+MLKAGSKGNLLKLVQ SMCLGLQ
Sbjct: 678 KSASLSQASASAFKKVFRDIQNLVYNYASNDNSLLAMLKAGSKGNLLKLVQHSMCLGLQQ 737
Query: 31 SVVPLSFSIP 2
S+VP+SF +P
Sbjct: 738 SLVPVSFRMP 747
>ref|XP_010325436.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Solanum lycopersicum]
Length = 1307
Score = 381 bits (978), Expect = e-103
Identities = 200/310 (64%), Positives = 243/310 (78%), Gaps = 1/310 (0%)
Frame = -3
Query: 928 DCLHGYVPQSVDSRVELNELVALNKQLLNGQSGRNLLSLSHDSLTAAHLILEDGVTLNKL 749
DCLHGY+PQS+DS +EL+ELVAL +QLL+GQ+G+NLLSLSHDSLTAAHLILE GV L++
Sbjct: 300 DCLHGYIPQSIDSTIELSELVALKQQLLDGQNGQNLLSLSHDSLTAAHLILEPGVFLDRF 359
Query: 748 QMQQLQMFCSCSIPIPAITKTPE-NKCFWTGKQLFSLLIPPCFDYVSQSNGLQISKGEIV 572
QMQQLQMFC + + AI K P N C+WTGKQLFSLL+P +YV SNG+ IS+GEIV
Sbjct: 360 QMQQLQMFCPRQLGMTAIVKAPPGNICYWTGKQLFSLLLPSDLEYVFPSNGVCISEGEIV 419
Query: 571 TSSIGSSWLRDNDGNLVHGLVKYCKNEVLGFLCAAQEVLCEWLATRGLSVSLSDLYLTPD 392
TSS GSSWLRD NL + LVK+ + L L AAQ VLCEWL+ RGLSVSLSDLY++ D
Sbjct: 420 TSSGGSSWLRDASDNLFYSLVKHNGGDTLDLLYAAQTVLCEWLSMRGLSVSLSDLYISAD 479
Query: 391 TCSRQNMIEEVSCGLQEAELLSSFRLLMVDSNQDFLVESIEANKSGVDFGVERLSSIQQQ 212
+ SR+NMI+EV GLQEAE LS +LLM+ N+DFL ++E +K+ + F E SI QQ
Sbjct: 480 SYSRENMIDEVCSGLQEAERLSYIQLLMIKYNKDFLSGNLEESKNSMGFDFE-FMSIMQQ 538
Query: 211 NSSVLSQASVSAFKQVFLDIQHLVYQYVSKENSFLSMLKAGSKGNLLKLVQQSMCLGLQH 32
S+ LSQAS SAFK+VF DIQ+LVY Y S +NS L+MLKAGSKGNLLKLVQ +MCLGLQ
Sbjct: 539 KSASLSQASASAFKKVFRDIQNLVYNYASNDNSLLAMLKAGSKGNLLKLVQHNMCLGLQQ 598
Query: 31 SVVPLSFSIP 2
S+VP+SF +P
Sbjct: 599 SLVPVSFRMP 608
>ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Solanum lycopersicum] gi|723724576|ref|XP_010325435.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1
isoform X1 [Solanum lycopersicum]
Length = 1446
Score = 381 bits (978), Expect = e-103
Identities = 200/310 (64%), Positives = 243/310 (78%), Gaps = 1/310 (0%)
Frame = -3
Query: 928 DCLHGYVPQSVDSRVELNELVALNKQLLNGQSGRNLLSLSHDSLTAAHLILEDGVTLNKL 749
DCLHGY+PQS+DS +EL+ELVAL +QLL+GQ+G+NLLSLSHDSLTAAHLILE GV L++
Sbjct: 439 DCLHGYIPQSIDSTIELSELVALKQQLLDGQNGQNLLSLSHDSLTAAHLILEPGVFLDRF 498
Query: 748 QMQQLQMFCSCSIPIPAITKTPE-NKCFWTGKQLFSLLIPPCFDYVSQSNGLQISKGEIV 572
QMQQLQMFC + + AI K P N C+WTGKQLFSLL+P +YV SNG+ IS+GEIV
Sbjct: 499 QMQQLQMFCPRQLGMTAIVKAPPGNICYWTGKQLFSLLLPSDLEYVFPSNGVCISEGEIV 558
Query: 571 TSSIGSSWLRDNDGNLVHGLVKYCKNEVLGFLCAAQEVLCEWLATRGLSVSLSDLYLTPD 392
TSS GSSWLRD NL + LVK+ + L L AAQ VLCEWL+ RGLSVSLSDLY++ D
Sbjct: 559 TSSGGSSWLRDASDNLFYSLVKHNGGDTLDLLYAAQTVLCEWLSMRGLSVSLSDLYISAD 618
Query: 391 TCSRQNMIEEVSCGLQEAELLSSFRLLMVDSNQDFLVESIEANKSGVDFGVERLSSIQQQ 212
+ SR+NMI+EV GLQEAE LS +LLM+ N+DFL ++E +K+ + F E SI QQ
Sbjct: 619 SYSRENMIDEVCSGLQEAERLSYIQLLMIKYNKDFLSGNLEESKNSMGFDFE-FMSIMQQ 677
Query: 211 NSSVLSQASVSAFKQVFLDIQHLVYQYVSKENSFLSMLKAGSKGNLLKLVQQSMCLGLQH 32
S+ LSQAS SAFK+VF DIQ+LVY Y S +NS L+MLKAGSKGNLLKLVQ +MCLGLQ
Sbjct: 678 KSASLSQASASAFKKVFRDIQNLVYNYASNDNSLLAMLKAGSKGNLLKLVQHNMCLGLQQ 737
Query: 31 SVVPLSFSIP 2
S+VP+SF +P
Sbjct: 738 SLVPVSFRMP 747
>gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
Length = 1138
Score = 381 bits (978), Expect = e-103
Identities = 200/310 (64%), Positives = 243/310 (78%), Gaps = 1/310 (0%)
Frame = -3
Query: 928 DCLHGYVPQSVDSRVELNELVALNKQLLNGQSGRNLLSLSHDSLTAAHLILEDGVTLNKL 749
DCLHGY+PQS+DS +EL+ELVAL +QLL+GQ+G+NLLSLSHDSLTAAHLILE GV L++
Sbjct: 131 DCLHGYIPQSIDSTIELSELVALKQQLLDGQNGQNLLSLSHDSLTAAHLILEPGVFLDRF 190
Query: 748 QMQQLQMFCSCSIPIPAITKTPE-NKCFWTGKQLFSLLIPPCFDYVSQSNGLQISKGEIV 572
QMQQLQMFC + + AI K P N C+WTGKQLFSLL+P +YV SNG+ IS+GEIV
Sbjct: 191 QMQQLQMFCPRQLGMTAIVKAPPGNICYWTGKQLFSLLLPSDLEYVFPSNGVCISEGEIV 250
Query: 571 TSSIGSSWLRDNDGNLVHGLVKYCKNEVLGFLCAAQEVLCEWLATRGLSVSLSDLYLTPD 392
TSS GSSWLRD NL + LVK+ + L L AAQ VLCEWL+ RGLSVSLSDLY++ D
Sbjct: 251 TSSGGSSWLRDASDNLFYSLVKHNGGDTLDLLYAAQTVLCEWLSMRGLSVSLSDLYISAD 310
Query: 391 TCSRQNMIEEVSCGLQEAELLSSFRLLMVDSNQDFLVESIEANKSGVDFGVERLSSIQQQ 212
+ SR+NMI+EV GLQEAE LS +LLM+ N+DFL ++E +K+ + F E SI QQ
Sbjct: 311 SYSRENMIDEVCSGLQEAERLSYIQLLMIKYNKDFLSGNLEESKNSMGFDFE-FMSIMQQ 369
Query: 211 NSSVLSQASVSAFKQVFLDIQHLVYQYVSKENSFLSMLKAGSKGNLLKLVQQSMCLGLQH 32
S+ LSQAS SAFK+VF DIQ+LVY Y S +NS L+MLKAGSKGNLLKLVQ +MCLGLQ
Sbjct: 370 KSASLSQASASAFKKVFRDIQNLVYNYASNDNSLLAMLKAGSKGNLLKLVQHNMCLGLQQ 429
Query: 31 SVVPLSFSIP 2
S+VP+SF +P
Sbjct: 430 SLVPVSFRMP 439
>ref|XP_012476049.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X3
[Gossypium raimondii]
Length = 1300
Score = 378 bits (970), Expect = e-102
Identities = 195/310 (62%), Positives = 242/310 (78%), Gaps = 1/310 (0%)
Frame = -3
Query: 928 DCLHGYVPQSVDSRVELNELVALNKQLLNGQSGRNLLSLSHDSLTAAHLILEDGVTLNKL 749
DCLHGYVPQS+++RVEL+ELV+L++QL+NGQSGRNLLSLSHDSLTAA+L+ EDGV LN
Sbjct: 467 DCLHGYVPQSINTRVELSELVSLDRQLINGQSGRNLLSLSHDSLTAAYLVKEDGVLLNLF 526
Query: 748 QMQQLQMFCSCSIPIPAITKTPE-NKCFWTGKQLFSLLIPPCFDYVSQSNGLQISKGEIV 572
QMQQL+MFC P+PAI K P + WTGKQLFS+L PP FDYV +G+ I G+++
Sbjct: 527 QMQQLEMFCPNHSPLPAIVKAPLLSNPVWTGKQLFSMLFPPEFDYVFAPSGVVIHNGDLI 586
Query: 571 TSSIGSSWLRDNDGNLVHGLVKYCKNEVLGFLCAAQEVLCEWLATRGLSVSLSDLYLTPD 392
SS GSSWLRD DGNL L+K+ + +VL FL AAQEVLCEWL+ RGLSVSL DLYL+PD
Sbjct: 587 CSSEGSSWLRDADGNLFQSLIKHYQGKVLDFLHAAQEVLCEWLSMRGLSVSLLDLYLSPD 646
Query: 391 TCSRQNMIEEVSCGLQEAELLSSFRLLMVDSNQDFLVESIEANKSGVDFGVERLSSIQQQ 212
T S++NM++E+ GLQEAE +F+ LMVDS QDFL + E + VE++ ++Q
Sbjct: 647 TDSQKNMMDEIFYGLQEAEQTCNFKQLMVDSCQDFLAGNDEETNRFMVLDVEQM-CYEKQ 705
Query: 211 NSSVLSQASVSAFKQVFLDIQHLVYQYVSKENSFLSMLKAGSKGNLLKLVQQSMCLGLQH 32
S+ LSQASV +FKQVF DIQ+L+Y+Y +K+NS +M KAGSKGNLLKLVQ SMCLGLQH
Sbjct: 706 RSAALSQASVDSFKQVFRDIQNLLYKYANKDNSLFTMFKAGSKGNLLKLVQHSMCLGLQH 765
Query: 31 SVVPLSFSIP 2
S+VPLSF P
Sbjct: 766 SLVPLSFRFP 775
>ref|XP_012476048.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Gossypium raimondii]
Length = 1340
Score = 378 bits (970), Expect = e-102
Identities = 195/310 (62%), Positives = 242/310 (78%), Gaps = 1/310 (0%)
Frame = -3
Query: 928 DCLHGYVPQSVDSRVELNELVALNKQLLNGQSGRNLLSLSHDSLTAAHLILEDGVTLNKL 749
DCLHGYVPQS+++RVEL+ELV+L++QL+NGQSGRNLLSLSHDSLTAA+L+ EDGV LN
Sbjct: 326 DCLHGYVPQSINTRVELSELVSLDRQLINGQSGRNLLSLSHDSLTAAYLVKEDGVLLNLF 385
Query: 748 QMQQLQMFCSCSIPIPAITKTPE-NKCFWTGKQLFSLLIPPCFDYVSQSNGLQISKGEIV 572
QMQQL+MFC P+PAI K P + WTGKQLFS+L PP FDYV +G+ I G+++
Sbjct: 386 QMQQLEMFCPNHSPLPAIVKAPLLSNPVWTGKQLFSMLFPPEFDYVFAPSGVVIHNGDLI 445
Query: 571 TSSIGSSWLRDNDGNLVHGLVKYCKNEVLGFLCAAQEVLCEWLATRGLSVSLSDLYLTPD 392
SS GSSWLRD DGNL L+K+ + +VL FL AAQEVLCEWL+ RGLSVSL DLYL+PD
Sbjct: 446 CSSEGSSWLRDADGNLFQSLIKHYQGKVLDFLHAAQEVLCEWLSMRGLSVSLLDLYLSPD 505
Query: 391 TCSRQNMIEEVSCGLQEAELLSSFRLLMVDSNQDFLVESIEANKSGVDFGVERLSSIQQQ 212
T S++NM++E+ GLQEAE +F+ LMVDS QDFL + E + VE++ ++Q
Sbjct: 506 TDSQKNMMDEIFYGLQEAEQTCNFKQLMVDSCQDFLAGNDEETNRFMVLDVEQM-CYEKQ 564
Query: 211 NSSVLSQASVSAFKQVFLDIQHLVYQYVSKENSFLSMLKAGSKGNLLKLVQQSMCLGLQH 32
S+ LSQASV +FKQVF DIQ+L+Y+Y +K+NS +M KAGSKGNLLKLVQ SMCLGLQH
Sbjct: 565 RSAALSQASVDSFKQVFRDIQNLLYKYANKDNSLFTMFKAGSKGNLLKLVQHSMCLGLQH 624
Query: 31 SVVPLSFSIP 2
S+VPLSF P
Sbjct: 625 SLVPLSFRFP 634
>gb|KJB25756.1| hypothetical protein B456_004G207300 [Gossypium raimondii]
Length = 1478
Score = 378 bits (970), Expect = e-102
Identities = 195/310 (62%), Positives = 242/310 (78%), Gaps = 1/310 (0%)
Frame = -3
Query: 928 DCLHGYVPQSVDSRVELNELVALNKQLLNGQSGRNLLSLSHDSLTAAHLILEDGVTLNKL 749
DCLHGYVPQS+++RVEL+ELV+L++QL+NGQSGRNLLSLSHDSLTAA+L+ EDGV LN
Sbjct: 464 DCLHGYVPQSINTRVELSELVSLDRQLINGQSGRNLLSLSHDSLTAAYLVKEDGVLLNLF 523
Query: 748 QMQQLQMFCSCSIPIPAITKTPE-NKCFWTGKQLFSLLIPPCFDYVSQSNGLQISKGEIV 572
QMQQL+MFC P+PAI K P + WTGKQLFS+L PP FDYV +G+ I G+++
Sbjct: 524 QMQQLEMFCPNHSPLPAIVKAPLLSNPVWTGKQLFSMLFPPEFDYVFAPSGVVIHNGDLI 583
Query: 571 TSSIGSSWLRDNDGNLVHGLVKYCKNEVLGFLCAAQEVLCEWLATRGLSVSLSDLYLTPD 392
SS GSSWLRD DGNL L+K+ + +VL FL AAQEVLCEWL+ RGLSVSL DLYL+PD
Sbjct: 584 CSSEGSSWLRDADGNLFQSLIKHYQGKVLDFLHAAQEVLCEWLSMRGLSVSLLDLYLSPD 643
Query: 391 TCSRQNMIEEVSCGLQEAELLSSFRLLMVDSNQDFLVESIEANKSGVDFGVERLSSIQQQ 212
T S++NM++E+ GLQEAE +F+ LMVDS QDFL + E + VE++ ++Q
Sbjct: 644 TDSQKNMMDEIFYGLQEAEQTCNFKQLMVDSCQDFLAGNDEETNRFMVLDVEQM-CYEKQ 702
Query: 211 NSSVLSQASVSAFKQVFLDIQHLVYQYVSKENSFLSMLKAGSKGNLLKLVQQSMCLGLQH 32
S+ LSQASV +FKQVF DIQ+L+Y+Y +K+NS +M KAGSKGNLLKLVQ SMCLGLQH
Sbjct: 703 RSAALSQASVDSFKQVFRDIQNLLYKYANKDNSLFTMFKAGSKGNLLKLVQHSMCLGLQH 762
Query: 31 SVVPLSFSIP 2
S+VPLSF P
Sbjct: 763 SLVPLSFRFP 772
>ref|XP_012476045.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Gossypium raimondii] gi|823152441|ref|XP_012476046.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
isoform X1 [Gossypium raimondii]
gi|763758424|gb|KJB25755.1| hypothetical protein
B456_004G207300 [Gossypium raimondii]
gi|763758426|gb|KJB25757.1| hypothetical protein
B456_004G207300 [Gossypium raimondii]
Length = 1481
Score = 378 bits (970), Expect = e-102
Identities = 195/310 (62%), Positives = 242/310 (78%), Gaps = 1/310 (0%)
Frame = -3
Query: 928 DCLHGYVPQSVDSRVELNELVALNKQLLNGQSGRNLLSLSHDSLTAAHLILEDGVTLNKL 749
DCLHGYVPQS+++RVEL+ELV+L++QL+NGQSGRNLLSLSHDSLTAA+L+ EDGV LN
Sbjct: 467 DCLHGYVPQSINTRVELSELVSLDRQLINGQSGRNLLSLSHDSLTAAYLVKEDGVLLNLF 526
Query: 748 QMQQLQMFCSCSIPIPAITKTPE-NKCFWTGKQLFSLLIPPCFDYVSQSNGLQISKGEIV 572
QMQQL+MFC P+PAI K P + WTGKQLFS+L PP FDYV +G+ I G+++
Sbjct: 527 QMQQLEMFCPNHSPLPAIVKAPLLSNPVWTGKQLFSMLFPPEFDYVFAPSGVVIHNGDLI 586
Query: 571 TSSIGSSWLRDNDGNLVHGLVKYCKNEVLGFLCAAQEVLCEWLATRGLSVSLSDLYLTPD 392
SS GSSWLRD DGNL L+K+ + +VL FL AAQEVLCEWL+ RGLSVSL DLYL+PD
Sbjct: 587 CSSEGSSWLRDADGNLFQSLIKHYQGKVLDFLHAAQEVLCEWLSMRGLSVSLLDLYLSPD 646
Query: 391 TCSRQNMIEEVSCGLQEAELLSSFRLLMVDSNQDFLVESIEANKSGVDFGVERLSSIQQQ 212
T S++NM++E+ GLQEAE +F+ LMVDS QDFL + E + VE++ ++Q
Sbjct: 647 TDSQKNMMDEIFYGLQEAEQTCNFKQLMVDSCQDFLAGNDEETNRFMVLDVEQM-CYEKQ 705
Query: 211 NSSVLSQASVSAFKQVFLDIQHLVYQYVSKENSFLSMLKAGSKGNLLKLVQQSMCLGLQH 32
S+ LSQASV +FKQVF DIQ+L+Y+Y +K+NS +M KAGSKGNLLKLVQ SMCLGLQH
Sbjct: 706 RSAALSQASVDSFKQVFRDIQNLLYKYANKDNSLFTMFKAGSKGNLLKLVQHSMCLGLQH 765
Query: 31 SVVPLSFSIP 2
S+VPLSF P
Sbjct: 766 SLVPLSFRFP 775
>ref|XP_011081158.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Sesamum indicum]
Length = 1408
Score = 372 bits (956), Expect = e-100
Identities = 198/309 (64%), Positives = 243/309 (78%)
Frame = -3
Query: 928 DCLHGYVPQSVDSRVELNELVALNKQLLNGQSGRNLLSLSHDSLTAAHLILEDGVTLNKL 749
DCLHGYVPQSV SRVELNELV+LN+QL NGQ+GRNLLSLS DSLTAA+L LEDGV LNK
Sbjct: 419 DCLHGYVPQSVTSRVELNELVSLNEQLHNGQNGRNLLSLSQDSLTAAYLFLEDGVLLNKP 478
Query: 748 QMQQLQMFCSCSIPIPAITKTPENKCFWTGKQLFSLLIPPCFDYVSQSNGLQISKGEIVT 569
+MQQLQMFCS +PAI K+ WTGKQLF LL+PP F++ SN + I +GE+V+
Sbjct: 479 EMQQLQMFCSFMPILPAIIKSTSGAA-WTGKQLFGLLLPPDFEFAYASNDVCIRQGELVS 537
Query: 568 SSIGSSWLRDNDGNLVHGLVKYCKNEVLGFLCAAQEVLCEWLATRGLSVSLSDLYLTPDT 389
SS GS+WLRD+ NL L+++ +++VL FL AAQEVLCEWL+ RGLSVSLSDLYL+PD+
Sbjct: 538 SSHGSAWLRDSCDNLFQCLLRHWRDKVLDFLHAAQEVLCEWLSRRGLSVSLSDLYLSPDS 597
Query: 388 CSRQNMIEEVSCGLQEAELLSSFRLLMVDSNQDFLVESIEANKSGVDFGVERLSSIQQQN 209
SR+N+++E+ GL +AE LS LLMVD NQDFLVES E +++ +F E + SI QQ
Sbjct: 598 QSRKNILDEIYYGLLQAEKLSDISLLMVDCNQDFLVESSEEHENMKNFLKEHM-SIAQQT 656
Query: 208 SSVLSQASVSAFKQVFLDIQHLVYQYVSKENSFLSMLKAGSKGNLLKLVQQSMCLGLQHS 29
+ L QAS+SA K VF D+Q+LVY+Y K NSF++MLKAGSKGNL KLVQ SMCLGLQHS
Sbjct: 657 KAELFQASISASKSVFWDMQNLVYKYSDKNNSFIAMLKAGSKGNLQKLVQHSMCLGLQHS 716
Query: 28 VVPLSFSIP 2
+ PLSFS+P
Sbjct: 717 LAPLSFSVP 725
>ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
cacao] gi|508777356|gb|EOY24612.1| DNA-directed RNA
polymerase II subunit RPB1-B, putative [Theobroma cacao]
Length = 1484
Score = 372 bits (955), Expect = e-100
Identities = 194/310 (62%), Positives = 237/310 (76%), Gaps = 1/310 (0%)
Frame = -3
Query: 928 DCLHGYVPQSVDSRVELNELVALNKQLLNGQSGRNLLSLSHDSLTAAHLILEDGVTLNKL 749
DCLHGYVPQS+ +RVEL ELV+LN+QL+NGQSGRNLLSLSHDSLTAA+L+ EDGV LN
Sbjct: 467 DCLHGYVPQSIKARVELIELVSLNRQLINGQSGRNLLSLSHDSLTAAYLVKEDGVLLNLF 526
Query: 748 QMQQLQMFCSCSIPIPAITKTPE-NKCFWTGKQLFSLLIPPCFDYVSQSNGLQISKGEIV 572
QMQQL+MFC P PAI K P WTGKQL S+L P FDY N + I GE++
Sbjct: 527 QMQQLEMFCPNHSPFPAIVKAPLLRSSVWTGKQLLSMLFPLEFDYDFTPNDVVIRNGELI 586
Query: 571 TSSIGSSWLRDNDGNLVHGLVKYCKNEVLGFLCAAQEVLCEWLATRGLSVSLSDLYLTPD 392
+SS GS+WLRD DGNL L+K+ + +VL FL AAQEVLCEWL+ RGLSVSLSDLYL+ D
Sbjct: 587 SSSEGSTWLRDADGNLFQSLIKHYQGKVLDFLYAAQEVLCEWLSMRGLSVSLSDLYLSSD 646
Query: 391 TCSRQNMIEEVSCGLQEAELLSSFRLLMVDSNQDFLVESIEANKSGVDFGVERLSSIQQQ 212
+ S++NM++E+ CGLQE E +F+ LMVDSN DFLV E S + VE++ ++Q
Sbjct: 647 SNSQKNMMDEIFCGLQEIEQTCNFKQLMVDSNHDFLVGHDEEVDSFMALDVEQM-CYEKQ 705
Query: 211 NSSVLSQASVSAFKQVFLDIQHLVYQYVSKENSFLSMLKAGSKGNLLKLVQQSMCLGLQH 32
S+ LSQASV +FKQVF DIQ+L+Y+Y +K+NS L+M KAGSKGNLLKLVQ S+CLGLQH
Sbjct: 706 RSAALSQASVDSFKQVFRDIQNLLYKYANKDNSLLTMFKAGSKGNLLKLVQHSLCLGLQH 765
Query: 31 SVVPLSFSIP 2
S+VPLSF P
Sbjct: 766 SLVPLSFRFP 775