BLASTX nr result
ID: Forsythia23_contig00014564
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia23_contig00014564
(854 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011096256.1| PREDICTED: RNA polymerase-associated protein... 185 4e-44
ref|XP_011468358.1| PREDICTED: RNA polymerase-associated protein... 148 4e-44
ref|XP_010057458.1| PREDICTED: RNA polymerase-associated protein... 177 1e-41
ref|XP_010646904.1| PREDICTED: RNA polymerase-associated protein... 170 1e-39
ref|XP_012849060.1| PREDICTED: protein RTF1 homolog [Erythranthe... 162 3e-37
gb|EYU27933.1| hypothetical protein MIMGU_mgv1a003121mg [Erythra... 162 3e-37
ref|XP_002519028.1| RNA polymerase-associated protein RTF1, puta... 161 4e-37
ref|XP_012455370.1| PREDICTED: RNA polymerase-associated protein... 160 1e-36
ref|XP_008228301.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera... 159 2e-36
ref|XP_010241126.1| PREDICTED: RNA polymerase-associated protein... 159 3e-36
ref|XP_012091565.1| PREDICTED: RNA polymerase-associated protein... 159 3e-36
ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein... 159 3e-36
ref|XP_010100559.1| RNA polymerase-associated protein RTF1-like ... 158 4e-36
ref|XP_009347098.1| PREDICTED: RNA polymerase-associated protein... 157 6e-36
ref|XP_008382360.1| PREDICTED: RNA polymerase-associated protein... 157 6e-36
ref|XP_007217631.1| hypothetical protein PRUPE_ppa002666mg [Prun... 157 1e-35
ref|XP_009623037.1| PREDICTED: RNA polymerase-associated protein... 156 2e-35
ref|XP_007025691.1| PAF1 complex component isoform 1 [Theobroma ... 155 2e-35
ref|XP_009378467.1| PREDICTED: RNA polymerase-associated protein... 154 7e-35
ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein... 153 2e-34
>ref|XP_011096256.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Sesamum
indicum]
Length = 627
Score = 185 bits (469), Expect = 4e-44
Identities = 99/138 (71%), Positives = 104/138 (75%)
Frame = -3
Query: 642 RNYYQSNPGGGEEAGDTNGDASAALEVANSNGGVPVXXXXXXXXXXXXXXXXXXXXXLVD 463
RNYY +N GGE AG+TNGDASAAL SNGG V LVD
Sbjct: 492 RNYYVANSNGGEAAGETNGDASAALP--GSNGGGRVSAEAGVAATAAALEAAAGAGKLVD 549
Query: 462 TRAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQRLEATVGCKVPENDGR 283
T APVDQGTESN+LHNFELPISLA LQKFGGPQGAQAGFMARKQR+EAT+G KVPENDGR
Sbjct: 550 TSAPVDQGTESNMLHNFELPISLAALQKFGGPQGAQAGFMARKQRIEATLGVKVPENDGR 609
Query: 282 RHALTLTVSDYKRRRGLL 229
RHALTLTVSDYKRRRGLL
Sbjct: 610 RHALTLTVSDYKRRRGLL 627
Score = 63.5 bits (153), Expect = 2e-07
Identities = 32/43 (74%), Positives = 36/43 (83%)
Frame = -1
Query: 854 LRRELEGAKMRDDEVEVERIKARLQELEVSRQTQEKDSKAIRL 726
LRR LE AK +DE EVER+KARLQELE SRQ QEKDSKA++L
Sbjct: 407 LRRALEVAKENEDEAEVERLKARLQELEASRQPQEKDSKAVKL 449
>ref|XP_011468358.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Fragaria
vesca subsp. vesca]
Length = 625
Score = 148 bits (373), Expect(2) = 4e-44
Identities = 81/137 (59%), Positives = 92/137 (67%), Gaps = 1/137 (0%)
Frame = -3
Query: 636 YYQSNPGGGEEAGDTNGDASAALEVANSNG-GVPVXXXXXXXXXXXXXXXXXXXXXLVDT 460
YY S P ++ + N A+ +L +NG G V L+DT
Sbjct: 489 YYVSKPDEQKDDAEANAVAAESLAEVETNGTGGVVAVRAGLEATAAALEAAAGAGKLIDT 548
Query: 459 RAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQRLEATVGCKVPENDGRR 280
APVDQGT SN LHNFELPISLA LQKFGGPQGAQ GFMARKQR+EATVG +VPE+DGRR
Sbjct: 549 MAPVDQGTSSNPLHNFELPISLATLQKFGGPQGAQEGFMARKQRIEATVGVRVPEDDGRR 608
Query: 279 HALTLTVSDYKRRRGLL 229
HALTL+VSDYKRRRGLL
Sbjct: 609 HALTLSVSDYKRRRGLL 625
Score = 58.5 bits (140), Expect(2) = 4e-44
Identities = 29/43 (67%), Positives = 36/43 (83%)
Frame = -1
Query: 854 LRRELEGAKMRDDEVEVERIKARLQELEVSRQTQEKDSKAIRL 726
LRRELE A+ + D+ EVERIKARL++LE RQ+Q KDSKA+RL
Sbjct: 434 LRRELEIAQSKHDDAEVERIKARLEQLEARRQSQGKDSKAVRL 476
>ref|XP_010057458.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Eucalyptus grandis] gi|629109481|gb|KCW74627.1|
hypothetical protein EUGRSUZ_E03353 [Eucalyptus grandis]
Length = 653
Score = 177 bits (448), Expect = 1e-41
Identities = 92/138 (66%), Positives = 98/138 (71%)
Frame = -3
Query: 642 RNYYQSNPGGGEEAGDTNGDASAALEVANSNGGVPVXXXXXXXXXXXXXXXXXXXXXLVD 463
RNYY S P GG EAG N + + A VA SNG VPV LVD
Sbjct: 516 RNYYVSKPNGGSEAGGANDNVNVASMVAESNGSVPVVSESGVVATVEALEAAADAGKLVD 575
Query: 462 TRAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQRLEATVGCKVPENDGR 283
T APVDQGTESNLLHNFELPISL VL+KFGG QGA GFM+RKQR+EATVGC+VPENDGR
Sbjct: 576 TNAPVDQGTESNLLHNFELPISLNVLRKFGGAQGALTGFMSRKQRIEATVGCRVPENDGR 635
Query: 282 RHALTLTVSDYKRRRGLL 229
RH LTLTVSDYKRRRGLL
Sbjct: 636 RHILTLTVSDYKRRRGLL 653
>ref|XP_010646904.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Vitis
vinifera]
Length = 658
Score = 170 bits (430), Expect = 1e-39
Identities = 93/139 (66%), Positives = 98/139 (70%), Gaps = 1/139 (0%)
Frame = -3
Query: 642 RNYYQSNPGGGEEAGDT-NGDASAALEVANSNGGVPVXXXXXXXXXXXXXXXXXXXXXLV 466
RNYY S PGGG+EA NG+A AA A SNG LV
Sbjct: 520 RNYYVSKPGGGDEAAAVANGEAPAAFVGAGSNGTGGKGAEVGVAATAAALEAAADAGKLV 579
Query: 465 DTRAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQRLEATVGCKVPENDG 286
DT APVDQGTESN LH+FELPISLA LQKFGGPQGA AGFMARKQR+EATVGC+VPENDG
Sbjct: 580 DTSAPVDQGTESNTLHDFELPISLAGLQKFGGPQGALAGFMARKQRIEATVGCRVPENDG 639
Query: 285 RRHALTLTVSDYKRRRGLL 229
RRHALTLTV DYKRRRGLL
Sbjct: 640 RRHALTLTVGDYKRRRGLL 658
>ref|XP_012849060.1| PREDICTED: protein RTF1 homolog [Erythranthe guttatus]
Length = 623
Score = 162 bits (409), Expect = 3e-37
Identities = 91/141 (64%), Positives = 96/141 (68%), Gaps = 3/141 (2%)
Frame = -3
Query: 642 RNYYQSNPGGGEEAG---DTNGDASAALEVANSNGGVPVXXXXXXXXXXXXXXXXXXXXX 472
RNYY N GGG EA +TNG AAL + V
Sbjct: 497 RNYYVGNSGGGVEAEVAVETNGGGGAALPGLAATEAALVAAAGAGKL------------- 543
Query: 471 LVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQRLEATVGCKVPEN 292
VDT APVDQGTESNLLHNFELPISLAVLQKFGGPQG QAGFMARKQR+EAT+G KVPEN
Sbjct: 544 -VDTMAPVDQGTESNLLHNFELPISLAVLQKFGGPQGTQAGFMARKQRIEATLGVKVPEN 602
Query: 291 DGRRHALTLTVSDYKRRRGLL 229
DGRRHALTL+VSDYKRRRGLL
Sbjct: 603 DGRRHALTLSVSDYKRRRGLL 623
Score = 58.5 bits (140), Expect = 5e-06
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = -1
Query: 854 LRRELEGAKMRDDEVEVERIKARLQELEVSRQTQEKDSKAIRL 726
LRR LE AK +D+ EVERIKARLQELE SRQ EK+SKA++L
Sbjct: 412 LRRSLEVAKENEDDAEVERIKARLQELESSRQALEKNSKAVKL 454
>gb|EYU27933.1| hypothetical protein MIMGU_mgv1a003121mg [Erythranthe guttata]
Length = 606
Score = 162 bits (409), Expect = 3e-37
Identities = 91/141 (64%), Positives = 96/141 (68%), Gaps = 3/141 (2%)
Frame = -3
Query: 642 RNYYQSNPGGGEEAG---DTNGDASAALEVANSNGGVPVXXXXXXXXXXXXXXXXXXXXX 472
RNYY N GGG EA +TNG AAL + V
Sbjct: 480 RNYYVGNSGGGVEAEVAVETNGGGGAALPGLAATEAALVAAAGAGKL------------- 526
Query: 471 LVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQRLEATVGCKVPEN 292
VDT APVDQGTESNLLHNFELPISLAVLQKFGGPQG QAGFMARKQR+EAT+G KVPEN
Sbjct: 527 -VDTMAPVDQGTESNLLHNFELPISLAVLQKFGGPQGTQAGFMARKQRIEATLGVKVPEN 585
Query: 291 DGRRHALTLTVSDYKRRRGLL 229
DGRRHALTL+VSDYKRRRGLL
Sbjct: 586 DGRRHALTLSVSDYKRRRGLL 606
>ref|XP_002519028.1| RNA polymerase-associated protein RTF1, putative [Ricinus communis]
gi|223541691|gb|EEF43239.1| RNA polymerase-associated
protein RTF1, putative [Ricinus communis]
Length = 660
Score = 161 bits (408), Expect = 4e-37
Identities = 86/139 (61%), Positives = 94/139 (67%), Gaps = 1/139 (0%)
Frame = -3
Query: 642 RNYYQSNPGGGEEAGDTNGDASAALEVAN-SNGGVPVXXXXXXXXXXXXXXXXXXXXXLV 466
RNYY S P GG+ A TN +AS + VAN + V LV
Sbjct: 522 RNYYVSKPAGGDAAAATNNEASGTVAVANKTESAAGVSAEAGMAATAAALEAAADAGKLV 581
Query: 465 DTRAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQRLEATVGCKVPENDG 286
DT APVDQGTESN LHNFELPISL LQKFGG QGAQAGFMARKQR+EAT+GC+V END
Sbjct: 582 DTAAPVDQGTESNTLHNFELPISLTALQKFGGAQGAQAGFMARKQRIEATIGCRVSENDE 641
Query: 285 RRHALTLTVSDYKRRRGLL 229
+RH LTLTVSDYKRRRGLL
Sbjct: 642 KRHVLTLTVSDYKRRRGLL 660
Score = 62.4 bits (150), Expect = 4e-07
Identities = 31/43 (72%), Positives = 37/43 (86%)
Frame = -1
Query: 854 LRRELEGAKMRDDEVEVERIKARLQELEVSRQTQEKDSKAIRL 726
LRRELE A+ + D+ EVERI+AR+QELE SRQTQ KD+KAIRL
Sbjct: 437 LRRELEVAQSKQDDAEVERIRARIQELEASRQTQGKDAKAIRL 479
>ref|XP_012455370.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Gossypium raimondii] gi|763802543|gb|KJB69481.1|
hypothetical protein B456_011G025800 [Gossypium
raimondii] gi|763802544|gb|KJB69482.1| hypothetical
protein B456_011G025800 [Gossypium raimondii]
gi|763802545|gb|KJB69483.1| hypothetical protein
B456_011G025800 [Gossypium raimondii]
Length = 660
Score = 160 bits (405), Expect = 1e-36
Identities = 83/138 (60%), Positives = 94/138 (68%)
Frame = -3
Query: 642 RNYYQSNPGGGEEAGDTNGDASAALEVANSNGGVPVXXXXXXXXXXXXXXXXXXXXXLVD 463
RNYY + GG+ A NGD + A+ N N LVD
Sbjct: 523 RNYYNAKAPGGDAAAVANGDTNGAIGSGNGNDAGAAAAEAGRAATAAALQEAAGAGKLVD 582
Query: 462 TRAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQRLEATVGCKVPENDGR 283
T APVD+GTESN+LH+FELPISL VL+KFGG +GA AGFMARKQR+EATVGC+VPENDGR
Sbjct: 583 TNAPVDEGTESNMLHDFELPISLDVLRKFGGHEGAVAGFMARKQRIEATVGCRVPENDGR 642
Query: 282 RHALTLTVSDYKRRRGLL 229
RHALTLTVSDYKRRRGLL
Sbjct: 643 RHALTLTVSDYKRRRGLL 660
Score = 61.6 bits (148), Expect = 6e-07
Identities = 30/43 (69%), Positives = 38/43 (88%)
Frame = -1
Query: 854 LRRELEGAKMRDDEVEVERIKARLQELEVSRQTQEKDSKAIRL 726
LRR+LE A+ + D+VEVERIK RLQ+LE SRQ+QEKD+KA+RL
Sbjct: 438 LRRDLEIAQSKHDDVEVERIKKRLQQLEASRQSQEKDAKAVRL 480
>ref|XP_008228301.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein
RTF1 homolog [Prunus mume]
Length = 648
Score = 159 bits (402), Expect = 2e-36
Identities = 86/139 (61%), Positives = 93/139 (66%), Gaps = 1/139 (0%)
Frame = -3
Query: 642 RNYYQSNPGGGEEAGDTNGDASAALEVANSNGGVPVXXXXXXXXXXXXXXXXXXXXXL-V 466
RNYY S PG + + DA AL SNG V +
Sbjct: 510 RNYYVSKPGEQKGEAEAIVDADGALADIESNGTAVVGAVRAGMAATAAALEAAAGAGKLI 569
Query: 465 DTRAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQRLEATVGCKVPENDG 286
DT APVD GTESNL+HNFELPISLA LQKFGGPQGAQ GF+ARKQR+EATVGC+VPENDG
Sbjct: 570 DTSAPVDFGTESNLMHNFELPISLATLQKFGGPQGAQEGFLARKQRIEATVGCRVPENDG 629
Query: 285 RRHALTLTVSDYKRRRGLL 229
RRHALTLTVSDYKRRRGLL
Sbjct: 630 RRHALTLTVSDYKRRRGLL 648
>ref|XP_010241126.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Nelumbo
nucifera]
Length = 666
Score = 159 bits (401), Expect = 3e-36
Identities = 83/138 (60%), Positives = 93/138 (67%)
Frame = -3
Query: 642 RNYYQSNPGGGEEAGDTNGDASAALEVANSNGGVPVXXXXXXXXXXXXXXXXXXXXXLVD 463
RNYY S PG G + ++A+ VA+S G LVD
Sbjct: 529 RNYYVSKPGEGAPTANGEAAVASAVSVASSGTGARAAAEAGIAATAAALEAAAGAGKLVD 588
Query: 462 TRAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQRLEATVGCKVPENDGR 283
T APVDQGTESN LH+FELPISLA LQKFGGPQGA GF+ RKQR+EATVGC+VPENDGR
Sbjct: 589 TSAPVDQGTESNSLHDFELPISLAGLQKFGGPQGAHLGFLGRKQRIEATVGCRVPENDGR 648
Query: 282 RHALTLTVSDYKRRRGLL 229
RH+LTLTVSDYKRRRGLL
Sbjct: 649 RHSLTLTVSDYKRRRGLL 666
Score = 59.7 bits (143), Expect = 2e-06
Identities = 32/44 (72%), Positives = 38/44 (86%), Gaps = 1/44 (2%)
Frame = -1
Query: 854 LRRELEGAKMRDDEVEVERIKARLQELE-VSRQTQEKDSKAIRL 726
LRRE+E A+ R DE EVERI+ARLQELE +SRQ +EKDSKA+RL
Sbjct: 443 LRREMEVAESRRDEAEVERIRARLQELEAMSRQAKEKDSKAVRL 486
>ref|XP_012091565.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Jatropha
curcas] gi|643703874|gb|KDP20938.1| hypothetical protein
JCGZ_21409 [Jatropha curcas]
Length = 658
Score = 159 bits (401), Expect = 3e-36
Identities = 85/139 (61%), Positives = 98/139 (70%), Gaps = 1/139 (0%)
Frame = -3
Query: 642 RNYYQSNPGGGEEAGDTNGDASAALEVANSNGGVP-VXXXXXXXXXXXXXXXXXXXXXLV 466
RNYY S PGG + A + N + +AA VA+SNG LV
Sbjct: 522 RNYYVSKPGGADVAAEANNNGTAA--VAHSNGAATGTLAEAGMAATAAALEAAADAGKLV 579
Query: 465 DTRAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQRLEATVGCKVPENDG 286
DT APVDQGTESN LH+F+LPISL L+KFGG +GA+AGFMARKQ++EATVGC+VPENDG
Sbjct: 580 DTAAPVDQGTESNTLHDFDLPISLTALEKFGGAKGAKAGFMARKQQIEATVGCRVPENDG 639
Query: 285 RRHALTLTVSDYKRRRGLL 229
RRHALTLTVSDYKRRRGLL
Sbjct: 640 RRHALTLTVSDYKRRRGLL 658
Score = 65.5 bits (158), Expect = 4e-08
Identities = 32/43 (74%), Positives = 38/43 (88%)
Frame = -1
Query: 854 LRRELEGAKMRDDEVEVERIKARLQELEVSRQTQEKDSKAIRL 726
LRRELE A+M+ D+ EVERI+AR+QELE SRQ QEKD+KAIRL
Sbjct: 437 LRRELEVAQMKQDDAEVERIRARIQELEASRQAQEKDAKAIRL 479
>ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform
X1 [Glycine max] gi|571466984|ref|XP_006583809.1|
PREDICTED: RNA polymerase-associated protein RTF1
homolog isoform X2 [Glycine max]
Length = 656
Score = 159 bits (401), Expect = 3e-36
Identities = 88/139 (63%), Positives = 97/139 (69%), Gaps = 1/139 (0%)
Frame = -3
Query: 642 RNYYQSNPGGGEEAGDTNGDASAALEVANSNG-GVPVXXXXXXXXXXXXXXXXXXXXXLV 466
RNYY + PG E+A N + + A SNG G PV LV
Sbjct: 520 RNYYAAKPG--EKAAAGNNSVNGNVAGAGSNGTGAPVTAEAGMVATAAALEAAAGAGKLV 577
Query: 465 DTRAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQRLEATVGCKVPENDG 286
DT APVDQGTESN+LHNFELPISLA+LQKFGG QGAQAGFMARKQ++EATVG +V ENDG
Sbjct: 578 DTSAPVDQGTESNMLHNFELPISLALLQKFGGAQGAQAGFMARKQKIEATVGFRVSENDG 637
Query: 285 RRHALTLTVSDYKRRRGLL 229
RRHALTLTVSDYKRRRGLL
Sbjct: 638 RRHALTLTVSDYKRRRGLL 656
>ref|XP_010100559.1| RNA polymerase-associated protein RTF1-like protein [Morus
notabilis] gi|587894274|gb|EXB82802.1| RNA
polymerase-associated protein RTF1-like protein [Morus
notabilis]
Length = 658
Score = 158 bits (400), Expect = 4e-36
Identities = 87/140 (62%), Positives = 96/140 (68%), Gaps = 2/140 (1%)
Frame = -3
Query: 642 RNYYQSNPGGGEEAGDTNGDASAALEVANSNG--GVPVXXXXXXXXXXXXXXXXXXXXXL 469
RNYY PG +E N + A A +NG G+ V L
Sbjct: 520 RNYYVGKPGEVKEDSGANAGNNGASTDAENNGRHGI-VAAEAGIAATEAALEAAADAGKL 578
Query: 468 VDTRAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQRLEATVGCKVPEND 289
VDT APVDQGT SN+LHNFELPISL+VLQKFGGPQGAQAGFMARKQR+EATVGC+VPEND
Sbjct: 579 VDTNAPVDQGTVSNMLHNFELPISLSVLQKFGGPQGAQAGFMARKQRIEATVGCRVPEND 638
Query: 288 GRRHALTLTVSDYKRRRGLL 229
GRRHALTL+V DYKRRRGLL
Sbjct: 639 GRRHALTLSVGDYKRRRGLL 658
Score = 58.9 bits (141), Expect = 4e-06
Identities = 29/43 (67%), Positives = 37/43 (86%)
Frame = -1
Query: 854 LRRELEGAKMRDDEVEVERIKARLQELEVSRQTQEKDSKAIRL 726
LRRELE A+ ++DEVEV+RIK RLQELE SR+ ++ D+KAIRL
Sbjct: 435 LRRELEVAQSKNDEVEVDRIKTRLQELEASRKAKQTDAKAIRL 477
>ref|XP_009347098.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Pyrus x
bretschneideri]
Length = 657
Score = 157 bits (398), Expect = 6e-36
Identities = 86/139 (61%), Positives = 92/139 (66%), Gaps = 1/139 (0%)
Frame = -3
Query: 642 RNYYQSNPGGGEEAGDTNGDASAALEVANSNGGVPVXXXXXXXXXXXXXXXXXXXXXL-V 466
RNYY S PG +E + A AL SNG V +
Sbjct: 519 RNYYVSKPGEQKEEAEAIAVADGALADIESNGTAVVGAVRAGMAATAAALEAAAGAGKLI 578
Query: 465 DTRAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQRLEATVGCKVPENDG 286
DT APVD GTESNL HNFELPISLA LQKFGGPQGAQ GF+ARKQR+EATVGC+VPENDG
Sbjct: 579 DTSAPVDFGTESNLKHNFELPISLAALQKFGGPQGAQKGFLARKQRIEATVGCQVPENDG 638
Query: 285 RRHALTLTVSDYKRRRGLL 229
RRHALTLTVSDYKRRRGLL
Sbjct: 639 RRHALTLTVSDYKRRRGLL 657
Score = 59.3 bits (142), Expect = 3e-06
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = -1
Query: 854 LRRELEGAKMRDDEVEVERIKARLQELEVSRQTQEKDSKAIRL 726
LRRELE AK + D+ EVERI+ RLQ+LE RQ+Q KDSKAIRL
Sbjct: 434 LRRELEVAKSKQDDAEVERIQTRLQQLEARRQSQGKDSKAIRL 476
>ref|XP_008382360.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Malus
domestica]
Length = 657
Score = 157 bits (398), Expect = 6e-36
Identities = 86/139 (61%), Positives = 92/139 (66%), Gaps = 1/139 (0%)
Frame = -3
Query: 642 RNYYQSNPGGGEEAGDTNGDASAALEVANSNGGVPVXXXXXXXXXXXXXXXXXXXXXL-V 466
RNYY S PG +E + A AL SNG V +
Sbjct: 519 RNYYVSKPGEQKEEAEAIAVADGALADIESNGTAVVGAVRAGMAATAAALEAAAGAGKLI 578
Query: 465 DTRAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQRLEATVGCKVPENDG 286
DT APVD GTESNL HNFELPISLA LQKFGGPQGAQ GF+ARKQR+EATVGC+VPENDG
Sbjct: 579 DTSAPVDFGTESNLKHNFELPISLAALQKFGGPQGAQKGFLARKQRIEATVGCQVPENDG 638
Query: 285 RRHALTLTVSDYKRRRGLL 229
RRHALTLTVSDYKRRRGLL
Sbjct: 639 RRHALTLTVSDYKRRRGLL 657
Score = 59.3 bits (142), Expect = 3e-06
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = -1
Query: 854 LRRELEGAKMRDDEVEVERIKARLQELEVSRQTQEKDSKAIRL 726
LRRELE AK + D+ EVERI+ RLQ+LE RQ+Q KDSKAIRL
Sbjct: 434 LRRELEVAKSKQDDAEVERIETRLQQLEARRQSQGKDSKAIRL 476
>ref|XP_007217631.1| hypothetical protein PRUPE_ppa002666mg [Prunus persica]
gi|462413781|gb|EMJ18830.1| hypothetical protein
PRUPE_ppa002666mg [Prunus persica]
Length = 646
Score = 157 bits (396), Expect = 1e-35
Identities = 85/139 (61%), Positives = 92/139 (66%), Gaps = 1/139 (0%)
Frame = -3
Query: 642 RNYYQSNPGGGEEAGDTNGDASAALEVANSNGGVPVXXXXXXXXXXXXXXXXXXXXXL-V 466
RNYY S PG + + DA AL SNG V +
Sbjct: 508 RNYYVSKPGEQKGEAEAIVDADGALADIESNGTAVVGAVRAGMAATAAALEAAAGAGKLI 567
Query: 465 DTRAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQRLEATVGCKVPENDG 286
DT APVD GTESNL+HNFELPISLA LQKFGGPQGAQ GF+ARKQR+EATVGC+VPENDG
Sbjct: 568 DTSAPVDFGTESNLMHNFELPISLATLQKFGGPQGAQEGFLARKQRIEATVGCRVPENDG 627
Query: 285 RRHALTLTVSDYKRRRGLL 229
RRHALTLTVSDYKRR GLL
Sbjct: 628 RRHALTLTVSDYKRRMGLL 646
Score = 58.5 bits (140), Expect = 5e-06
Identities = 29/43 (67%), Positives = 35/43 (81%)
Frame = -1
Query: 854 LRRELEGAKMRDDEVEVERIKARLQELEVSRQTQEKDSKAIRL 726
LRRELE A+ + D+ EVERIK RLQ+LE RQ+Q KDSKA+RL
Sbjct: 423 LRRELEVAQSKHDDAEVERIKTRLQQLEARRQSQGKDSKAVRL 465
>ref|XP_009623037.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Nicotiana tomentosiformis]
Length = 654
Score = 156 bits (394), Expect = 2e-35
Identities = 84/137 (61%), Positives = 98/137 (71%)
Frame = -3
Query: 639 NYYQSNPGGGEEAGDTNGDASAALEVANSNGGVPVXXXXXXXXXXXXXXXXXXXXXLVDT 460
NY+ + E G +NG+A+AAL V ++NG + VDT
Sbjct: 520 NYFAKSANEAAE-GASNGEAAAALAVVDNNGAGGIADGGMEATAAALQAAAGAGKL-VDT 577
Query: 459 RAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQRLEATVGCKVPENDGRR 280
APVD GTESN LH+F+LPISLAVLQKFGGPQG+QAGFMARKQR+EATVGC+VPENDGRR
Sbjct: 578 IAPVDLGTESNTLHDFDLPISLAVLQKFGGPQGSQAGFMARKQRIEATVGCRVPENDGRR 637
Query: 279 HALTLTVSDYKRRRGLL 229
HALTL+VSDYKRRRGLL
Sbjct: 638 HALTLSVSDYKRRRGLL 654
Score = 63.9 bits (154), Expect = 1e-07
Identities = 32/43 (74%), Positives = 37/43 (86%)
Frame = -1
Query: 854 LRRELEGAKMRDDEVEVERIKARLQELEVSRQTQEKDSKAIRL 726
LRRE+E AKM++DE EVE+IKARLQELE SR+ QEKD KA RL
Sbjct: 434 LRREMEVAKMKNDEAEVEKIKARLQELEASRKAQEKDDKARRL 476
>ref|XP_007025691.1| PAF1 complex component isoform 1 [Theobroma cacao]
gi|590624750|ref|XP_007025692.1| PAF1 complex component
isoform 1 [Theobroma cacao] gi|508781057|gb|EOY28313.1|
PAF1 complex component isoform 1 [Theobroma cacao]
gi|508781058|gb|EOY28314.1| PAF1 complex component
isoform 1 [Theobroma cacao]
Length = 660
Score = 155 bits (393), Expect = 2e-35
Identities = 82/138 (59%), Positives = 92/138 (66%)
Frame = -3
Query: 642 RNYYQSNPGGGEEAGDTNGDASAALEVANSNGGVPVXXXXXXXXXXXXXXXXXXXXXLVD 463
RNYY + P G + A NGD + N N LVD
Sbjct: 524 RNYYVAKPPGADAAAVANGDRIGVIASGNGNDA-RAAAEAGRAATVAALQEAAGAGKLVD 582
Query: 462 TRAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQRLEATVGCKVPENDGR 283
T APVD+GTESN+LH+FE+PISL LQ+FGGPQGA AGFMARKQR+EATVGC+VPENDGR
Sbjct: 583 TSAPVDEGTESNMLHDFEIPISLNALQRFGGPQGAVAGFMARKQRIEATVGCQVPENDGR 642
Query: 282 RHALTLTVSDYKRRRGLL 229
RHALTLTVSDYKRRRGLL
Sbjct: 643 RHALTLTVSDYKRRRGLL 660
Score = 60.8 bits (146), Expect = 1e-06
Identities = 30/43 (69%), Positives = 36/43 (83%)
Frame = -1
Query: 854 LRRELEGAKMRDDEVEVERIKARLQELEVSRQTQEKDSKAIRL 726
LRR+LE A+ + DE EVERIK RLQ+LE SRQ QEKD+KA+RL
Sbjct: 439 LRRDLEIAQSKHDEAEVERIKMRLQQLEASRQAQEKDAKAVRL 481
>ref|XP_009378467.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Pyrus x
bretschneideri]
Length = 657
Score = 154 bits (389), Expect = 7e-35
Identities = 84/139 (60%), Positives = 92/139 (66%), Gaps = 1/139 (0%)
Frame = -3
Query: 642 RNYYQSNPGGGEEAGDTNGDASAALEVANSNGGVPVXXXXXXXXXXXXXXXXXXXXXL-V 466
RNYY S PG +E + A AL SNG V +
Sbjct: 519 RNYYVSKPGEQKEEAEAIAVADGALVDIESNGTAVVGAVRAGMAATAAALEAAAGAGKLI 578
Query: 465 DTRAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQRLEATVGCKVPENDG 286
DT AP+D GTESNL H+FELPISLA LQKFGGPQGAQ GF+ARKQR+EATVGC+VPENDG
Sbjct: 579 DTSAPLDFGTESNLKHDFELPISLAALQKFGGPQGAQKGFLARKQRIEATVGCQVPENDG 638
Query: 285 RRHALTLTVSDYKRRRGLL 229
RRHALTLTVSDYKRRRGLL
Sbjct: 639 RRHALTLTVSDYKRRRGLL 657
Score = 59.3 bits (142), Expect = 3e-06
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = -1
Query: 854 LRRELEGAKMRDDEVEVERIKARLQELEVSRQTQEKDSKAIRL 726
LRRELE AK + D+ EVERI+ RLQ+LE RQ+Q KDSKAIRL
Sbjct: 434 LRRELEVAKSKQDDAEVERIQTRLQQLEARRQSQGKDSKAIRL 476
>ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Solanum
tuberosum]
Length = 652
Score = 153 bits (386), Expect = 2e-34
Identities = 87/139 (62%), Positives = 95/139 (68%), Gaps = 2/139 (1%)
Frame = -3
Query: 639 NYYQSNPGGGEEA-GDTNGD-ASAALEVANSNGGVPVXXXXXXXXXXXXXXXXXXXXXLV 466
NY+ G EEA G +NG+ A+AA A N G LV
Sbjct: 516 NYFAK--GANEEAEGASNGEVAAAAALAAEDNNGASGTADGGMAATAAALQAAAGAGKLV 573
Query: 465 DTRAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQRLEATVGCKVPENDG 286
DT APVDQGTESN LH+F+LPISLAVLQKFGG QG QAGFMARKQR+EATVGC VPENDG
Sbjct: 574 DTNAPVDQGTESNTLHDFDLPISLAVLQKFGGSQGGQAGFMARKQRIEATVGCSVPENDG 633
Query: 285 RRHALTLTVSDYKRRRGLL 229
RRHALTL+VSDYKRRRGLL
Sbjct: 634 RRHALTLSVSDYKRRRGLL 652
Score = 61.6 bits (148), Expect = 6e-07
Identities = 31/43 (72%), Positives = 37/43 (86%)
Frame = -1
Query: 854 LRRELEGAKMRDDEVEVERIKARLQELEVSRQTQEKDSKAIRL 726
LRR++E AKM++DE EVERIKARLQEL+ SR+ QEKD KA RL
Sbjct: 430 LRRDMEVAKMKNDEAEVERIKARLQELDDSRKVQEKDDKARRL 472