BLASTX nr result
ID: Forsythia22_contig00062833
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Forsythia22_contig00062833 (235 letters) Database: ./nr 69,698,275 sequences; 24,982,196,650 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotei... 65 1e-08 gb|AAC28238.1| contains similarity to reverse trancriptase (Pfam... 59 1e-06 emb|CAN80993.1| hypothetical protein VITISV_022128 [Vitis vinifera] 57 6e-06 emb|CAN72704.1| hypothetical protein VITISV_016225 [Vitis vinifera] 56 8e-06 >ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT 1-94 [Erythranthe guttatus] Length = 598 Score = 65.5 bits (158), Expect = 1e-08 Identities = 32/52 (61%), Positives = 37/52 (71%) Frame = -1 Query: 232 GGKL*PRSQKCIFMGYPQGSKGYRIGLKVPIKGYKVVISRVVIFNKDDMPCL 77 G KL PR KCIF+GYP G KGYR+ LK GYK++ISR VIFN+ PCL Sbjct: 386 GDKLEPRFVKCIFLGYPDGVKGYRLWLKGDF-GYKIIISRDVIFNESGFPCL 436 >gb|AAC28238.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score: 19.54) and CCHC-type zinc fingers (Pfam: zf-CCHC.hmm, score: 12.35) [Arabidopsis thaliana] gi|7267184|emb|CAB77896.1| putative transposon protein [Arabidopsis thaliana] Length = 1104 Score = 58.9 bits (141), Expect = 1e-06 Identities = 34/76 (44%), Positives = 47/76 (61%) Frame = -1 Query: 229 GKL*PRSQKCIFMGYPQGSKGYRIGLKVPIKGYKVVISRVVIFNKDDMPCLIESACYDAD 50 GKL PR K +F+GYPQG+KGY++ L I K VISR V+FN+D + ++S D D Sbjct: 557 GKLKPRVLKGVFLGYPQGTKGYKVWL---IDEEKCVISRNVVFNEDSVFKDLQSGSKDED 613 Query: 49 STHYKNTQQQVELEMP 2 T + Q+E+E P Sbjct: 614 ET--VTQESQIEIETP 627 >emb|CAN80993.1| hypothetical protein VITISV_022128 [Vitis vinifera] Length = 1017 Score = 56.6 bits (135), Expect = 6e-06 Identities = 27/48 (56%), Positives = 37/48 (77%) Frame = -1 Query: 229 GKL*PRSQKCIFMGYPQGSKGYRIGLKVPIKGYKVVISRVVIFNKDDM 86 GKL PRS KCIF+GYP+G KGYR+ K G K++ISR V+FN++++ Sbjct: 176 GKLKPRSIKCIFLGYPEGVKGYRLWYK-ESPGVKIIISRDVMFNENEI 222 >emb|CAN72704.1| hypothetical protein VITISV_016225 [Vitis vinifera] Length = 817 Score = 56.2 bits (134), Expect = 8e-06 Identities = 27/48 (56%), Positives = 37/48 (77%) Frame = -1 Query: 229 GKL*PRSQKCIFMGYPQGSKGYRIGLKVPIKGYKVVISRVVIFNKDDM 86 GKL PRS KCIF+G+P+G KGYR+ K G K++ISR V+FN+++M Sbjct: 236 GKLEPRSIKCIFLGHPEGVKGYRLWNK-ESPGVKIIISRDVVFNENEM 282