BLASTX nr result
ID: Forsythia22_contig00062783
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00062783
(250 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009110660.1| Ycf1 protein (chloroplast) [Hesperelaea palm... 171 2e-40
emb|CBR30467.1| Ycf1 protein [Olea europaea subsp. europaea] 167 3e-39
ref|YP_004563839.1| Ycf1 protein [Olea europaea subsp. cuspidata... 166 4e-39
ref|YP_004564555.1| Ycf1 protein [Olea europaea subsp. maroccana... 166 4e-39
ref|YP_004376479.1| Ycf1 protein [Olea europaea subsp. europaea]... 166 4e-39
ref|YP_003359417.2| Ycf1 (chloroplast) [Olea europaea] gi|291059... 166 4e-39
ref|YP_004564062.1| Ycf1 protein [Olea woodiana subsp. woodiana]... 164 2e-38
emb|CBR23889.1| Ycf1 protein [Olea europaea subsp. cuspidata] 161 1e-37
emb|CBR23797.1| Ycf1 protein [Olea europaea subsp. cuspidata] 156 4e-36
ref|YP_004935725.1| ycf1 gene product (chloroplast) [Sesamum ind... 142 9e-32
gb|AFI72615.1| Ycf1, partial [Congea griffithiana] 140 3e-31
ref|YP_009115955.1| photosystem I assembly protein Ycf1 [Scrophu... 136 5e-30
gb|AFI72624.1| Ycf1, partial [Gmelina arborea] 136 5e-30
gb|AFI72609.1| Ycf1, partial [Callicarpa pedunculata] 135 8e-30
gb|AFI72608.1| Ycf1, partial [Callicarpa japonica] 135 8e-30
ref|YP_007353973.1| Ycf1 protein (chloroplast) [Tectona grandis]... 135 1e-29
ref|XP_011081446.1| PREDICTED: LOW QUALITY PROTEIN: protein TIC ... 133 5e-29
gb|ADD30913.1| putative RF1 protein (chloroplast) [Berberidopsis... 133 5e-29
gb|ADD30906.1| putative RF1 protein (chloroplast) [Ilex cornuta] 131 2e-28
gb|AFI72631.1| Ycf1, partial [Lindernia dubia] 130 3e-28
>ref|YP_009110660.1| Ycf1 protein (chloroplast) [Hesperelaea palmeri]
gi|725798344|emb|CED79820.1| Ycf1 protein (chloroplast)
[Hesperelaea palmeri]
Length = 1876
Score = 171 bits (433), Expect = 2e-40
Identities = 78/83 (93%), Positives = 81/83 (97%)
Frame = -1
Query: 250 IKDSFETQGIVHSKLRDNRLPSSKMNQWKNWLRGHYQYDLSRIRWSRLIPQQWRNRVHQR 71
IKDSFETQGIVHSKLRDNRLPSS+MNQWKNWLRGHYQYDLS+IRWSRLIPQQWRNRV+QR
Sbjct: 1262 IKDSFETQGIVHSKLRDNRLPSSEMNQWKNWLRGHYQYDLSQIRWSRLIPQQWRNRVYQR 1321
Query: 70 RMVKRKNLSKWNSYEKDQLIDYK 2
RMVKRKN SKWN YEKDQLIDYK
Sbjct: 1322 RMVKRKNFSKWNLYEKDQLIDYK 1344
>emb|CBR30467.1| Ycf1 protein [Olea europaea subsp. europaea]
Length = 1801
Score = 167 bits (422), Expect = 3e-39
Identities = 76/83 (91%), Positives = 80/83 (96%)
Frame = -1
Query: 250 IKDSFETQGIVHSKLRDNRLPSSKMNQWKNWLRGHYQYDLSRIRWSRLIPQQWRNRVHQR 71
IKDSFETQGIVHSKL+DNRLPSS+MNQWKNWLRGHYQYDLS+IRWSRLIPQQWRNRV+QR
Sbjct: 1185 IKDSFETQGIVHSKLKDNRLPSSEMNQWKNWLRGHYQYDLSKIRWSRLIPQQWRNRVYQR 1244
Query: 70 RMVKRKNLSKWNSYEKDQLIDYK 2
RMVKRKN SKWN YEKDQLID K
Sbjct: 1245 RMVKRKNFSKWNLYEKDQLIDSK 1267
>ref|YP_004563839.1| Ycf1 protein [Olea europaea subsp. cuspidata]
gi|334085008|emb|CBJ04356.1| Ycf1 protein [Olea europaea
subsp. cuspidata]
Length = 1876
Score = 166 bits (421), Expect = 4e-39
Identities = 76/83 (91%), Positives = 80/83 (96%)
Frame = -1
Query: 250 IKDSFETQGIVHSKLRDNRLPSSKMNQWKNWLRGHYQYDLSRIRWSRLIPQQWRNRVHQR 71
IKDSFETQGIVHSKL+DNRLPSS+MNQWKNWLRGHYQYDLS+IRWSRLIPQQWRNRV+QR
Sbjct: 1260 IKDSFETQGIVHSKLKDNRLPSSEMNQWKNWLRGHYQYDLSQIRWSRLIPQQWRNRVYQR 1319
Query: 70 RMVKRKNLSKWNSYEKDQLIDYK 2
RMVKRKN SKWN YEKDQLID K
Sbjct: 1320 RMVKRKNFSKWNLYEKDQLIDSK 1342
>ref|YP_004564555.1| Ycf1 protein [Olea europaea subsp. maroccana]
gi|334084922|emb|CBS29308.1| Ycf1 protein [Olea europaea
subsp. maroccana]
Length = 1876
Score = 166 bits (421), Expect = 4e-39
Identities = 76/83 (91%), Positives = 80/83 (96%)
Frame = -1
Query: 250 IKDSFETQGIVHSKLRDNRLPSSKMNQWKNWLRGHYQYDLSRIRWSRLIPQQWRNRVHQR 71
IKDSFETQGIVHSKL+DNRLPSS+MNQWKNWLRGHYQYDLS+IRWSRLIPQQWRNRV+QR
Sbjct: 1260 IKDSFETQGIVHSKLKDNRLPSSEMNQWKNWLRGHYQYDLSQIRWSRLIPQQWRNRVYQR 1319
Query: 70 RMVKRKNLSKWNSYEKDQLIDYK 2
RMVKRKN SKWN YEKDQLID K
Sbjct: 1320 RMVKRKNFSKWNLYEKDQLIDSK 1342
>ref|YP_004376479.1| Ycf1 protein [Olea europaea subsp. europaea]
gi|328795491|emb|CBR30373.1| Ycf1 protein [Olea europaea
subsp. europaea]
Length = 1876
Score = 166 bits (421), Expect = 4e-39
Identities = 76/83 (91%), Positives = 80/83 (96%)
Frame = -1
Query: 250 IKDSFETQGIVHSKLRDNRLPSSKMNQWKNWLRGHYQYDLSRIRWSRLIPQQWRNRVHQR 71
IKDSFETQGIVHSKL+DNRLPSS+MNQWKNWLRGHYQYDLS+IRWSRLIPQQWRNRV+QR
Sbjct: 1260 IKDSFETQGIVHSKLKDNRLPSSEMNQWKNWLRGHYQYDLSQIRWSRLIPQQWRNRVYQR 1319
Query: 70 RMVKRKNLSKWNSYEKDQLIDYK 2
RMVKRKN SKWN YEKDQLID K
Sbjct: 1320 RMVKRKNFSKWNLYEKDQLIDSK 1342
>ref|YP_003359417.2| Ycf1 (chloroplast) [Olea europaea] gi|291059312|gb|ADD72148.1| YCF1
protein [Olea europaea] gi|334084545|emb|CBR24683.1| Ycf1
protein [Olea europaea subsp. europaea]
gi|363413092|gb|ADA69984.2| Ycf1 (chloroplast) [Olea
europaea] gi|510934462|emb|CCQ09160.1| Ycf1 protein
(chloroplast) [Olea europaea subsp. europaea]
Length = 1876
Score = 166 bits (421), Expect = 4e-39
Identities = 76/83 (91%), Positives = 80/83 (96%)
Frame = -1
Query: 250 IKDSFETQGIVHSKLRDNRLPSSKMNQWKNWLRGHYQYDLSRIRWSRLIPQQWRNRVHQR 71
IKDSFETQGIVHSKL+DNRLPSS+MNQWKNWLRGHYQYDLS+IRWSRLIPQQWRNRV+QR
Sbjct: 1260 IKDSFETQGIVHSKLKDNRLPSSEMNQWKNWLRGHYQYDLSQIRWSRLIPQQWRNRVYQR 1319
Query: 70 RMVKRKNLSKWNSYEKDQLIDYK 2
RMVKRKN SKWN YEKDQLID K
Sbjct: 1320 RMVKRKNFSKWNLYEKDQLIDSK 1342
>ref|YP_004564062.1| Ycf1 protein [Olea woodiana subsp. woodiana]
gi|334084717|emb|CBS29411.1| Ycf1 protein [Olea woodiana
subsp. woodiana]
Length = 1876
Score = 164 bits (415), Expect = 2e-38
Identities = 74/83 (89%), Positives = 79/83 (95%)
Frame = -1
Query: 250 IKDSFETQGIVHSKLRDNRLPSSKMNQWKNWLRGHYQYDLSRIRWSRLIPQQWRNRVHQR 71
IKDSFETQGI+HSKL+DNRLPSS+MNQWKNWLRGHYQYDLS+IRWSRLIPQQWRNRV+QR
Sbjct: 1260 IKDSFETQGIIHSKLKDNRLPSSEMNQWKNWLRGHYQYDLSQIRWSRLIPQQWRNRVYQR 1319
Query: 70 RMVKRKNLSKWNSYEKDQLIDYK 2
RMVKRKN KWN YEKDQLID K
Sbjct: 1320 RMVKRKNFRKWNLYEKDQLIDSK 1342
>emb|CBR23889.1| Ycf1 protein [Olea europaea subsp. cuspidata]
Length = 1876
Score = 161 bits (408), Expect = 1e-37
Identities = 75/83 (90%), Positives = 79/83 (95%)
Frame = -1
Query: 250 IKDSFETQGIVHSKLRDNRLPSSKMNQWKNWLRGHYQYDLSRIRWSRLIPQQWRNRVHQR 71
IKDSFETQGIVHSKL+DNRLPSS+MNQWKNWLRGHYQYDLS+IRWSRLIPQQ RNRV+QR
Sbjct: 1260 IKDSFETQGIVHSKLKDNRLPSSEMNQWKNWLRGHYQYDLSQIRWSRLIPQQCRNRVYQR 1319
Query: 70 RMVKRKNLSKWNSYEKDQLIDYK 2
RMVKRKN SKWN YEKDQLID K
Sbjct: 1320 RMVKRKNFSKWNLYEKDQLIDSK 1342
>emb|CBR23797.1| Ycf1 protein [Olea europaea subsp. cuspidata]
Length = 1876
Score = 156 bits (395), Expect = 4e-36
Identities = 73/83 (87%), Positives = 77/83 (92%)
Frame = -1
Query: 250 IKDSFETQGIVHSKLRDNRLPSSKMNQWKNWLRGHYQYDLSRIRWSRLIPQQWRNRVHQR 71
IKDSFETQGIVHSKL+DNRLPSS+MNQWKNWLRGHYQYDLS+IRWSRLIPQQ RN +QR
Sbjct: 1260 IKDSFETQGIVHSKLKDNRLPSSEMNQWKNWLRGHYQYDLSQIRWSRLIPQQCRNSDYQR 1319
Query: 70 RMVKRKNLSKWNSYEKDQLIDYK 2
RMVKRKN SKWN YEKDQLID K
Sbjct: 1320 RMVKRKNFSKWNLYEKDQLIDSK 1342
>ref|YP_004935725.1| ycf1 gene product (chloroplast) [Sesamum indicum]
gi|347448354|gb|AEO92765.1| ycf1 protein (chloroplast)
[Sesamum indicum] gi|496538659|gb|AGL45394.1| Ycf1
(chloroplast) [Sesamum indicum]
Length = 1789
Score = 142 bits (358), Expect = 9e-32
Identities = 64/83 (77%), Positives = 74/83 (89%)
Frame = -1
Query: 250 IKDSFETQGIVHSKLRDNRLPSSKMNQWKNWLRGHYQYDLSRIRWSRLIPQQWRNRVHQR 71
IKDSFETQG+V SKL D +L S +MNQWKNWLRGHYQYDLS IRWSRLIP++WRNRVH+R
Sbjct: 1224 IKDSFETQGMVLSKLGDKKLRSYEMNQWKNWLRGHYQYDLSEIRWSRLIPEKWRNRVHRR 1283
Query: 70 RMVKRKNLSKWNSYEKDQLIDYK 2
R+ K++NL KW+SYEKDQLID K
Sbjct: 1284 RIAKKENLRKWHSYEKDQLIDSK 1306
>gb|AFI72615.1| Ycf1, partial [Congea griffithiana]
Length = 1516
Score = 140 bits (353), Expect = 3e-31
Identities = 65/85 (76%), Positives = 75/85 (88%), Gaps = 2/85 (2%)
Frame = -1
Query: 250 IKDSFETQGIVHSKLRDNRLPSSKMNQWKNWLRGHYQYDLSRIRWSRLIPQQWRNR--VH 77
IKDSFETQG+VHSKL D +LPS +MNQWKNWLRGHYQY LS+IRWSRLIP++WRNR VH
Sbjct: 920 IKDSFETQGMVHSKLADKKLPSYEMNQWKNWLRGHYQYHLSQIRWSRLIPKKWRNRNTVH 979
Query: 76 QRRMVKRKNLSKWNSYEKDQLIDYK 2
+R + K+KNLSKW+S EKDQLID K
Sbjct: 980 KRHIAKKKNLSKWHSDEKDQLIDSK 1004
>ref|YP_009115955.1| photosystem I assembly protein Ycf1 [Scrophularia takesimensis]
gi|744673800|gb|AJD00785.1| photosystem I assembly
protein Ycf1 [Scrophularia takesimensis]
Length = 1789
Score = 136 bits (343), Expect = 5e-30
Identities = 61/83 (73%), Positives = 72/83 (86%)
Frame = -1
Query: 250 IKDSFETQGIVHSKLRDNRLPSSKMNQWKNWLRGHYQYDLSRIRWSRLIPQQWRNRVHQR 71
IKDSFETQG+VHSK+ D +LPS +MNQWKNWLR HYQYDLS+IRWSRLIP++WRN VHQR
Sbjct: 1181 IKDSFETQGMVHSKIGDKKLPSYEMNQWKNWLRAHYQYDLSQIRWSRLIPEKWRNTVHQR 1240
Query: 70 RMVKRKNLSKWNSYEKDQLIDYK 2
R+ K+ + SK +SYEKDQLI K
Sbjct: 1241 RIAKKSHFSKRHSYEKDQLIGSK 1263
>gb|AFI72624.1| Ycf1, partial [Gmelina arborea]
Length = 1526
Score = 136 bits (343), Expect = 5e-30
Identities = 63/83 (75%), Positives = 72/83 (86%)
Frame = -1
Query: 250 IKDSFETQGIVHSKLRDNRLPSSKMNQWKNWLRGHYQYDLSRIRWSRLIPQQWRNRVHQR 71
IKDSFETQ + HSKL D +LPS +MNQWKNWLRGH QY LS+IRWSRLIP++WRNRVH R
Sbjct: 917 IKDSFETQRMFHSKLADKKLPSYEMNQWKNWLRGHCQYHLSQIRWSRLIPEKWRNRVHPR 976
Query: 70 RMVKRKNLSKWNSYEKDQLIDYK 2
R+ KR+NLSK +SYEKDQLID K
Sbjct: 977 RIAKRENLSKRHSYEKDQLIDSK 999
>gb|AFI72609.1| Ycf1, partial [Callicarpa pedunculata]
Length = 1523
Score = 135 bits (341), Expect = 8e-30
Identities = 62/83 (74%), Positives = 72/83 (86%)
Frame = -1
Query: 250 IKDSFETQGIVHSKLRDNRLPSSKMNQWKNWLRGHYQYDLSRIRWSRLIPQQWRNRVHQR 71
IKDSFETQG+VHSK D +LPS +MNQWKNWLRGHYQY LS+IRWSRLIP++WRN VH R
Sbjct: 919 IKDSFETQGMVHSKSADKKLPSYEMNQWKNWLRGHYQYHLSQIRWSRLIPEKWRNTVHPR 978
Query: 70 RMVKRKNLSKWNSYEKDQLIDYK 2
R+ K +N SKW+SYEKDQLI+ K
Sbjct: 979 RIAK-ENFSKWHSYEKDQLINSK 1000
>gb|AFI72608.1| Ycf1, partial [Callicarpa japonica]
Length = 1523
Score = 135 bits (341), Expect = 8e-30
Identities = 62/83 (74%), Positives = 72/83 (86%)
Frame = -1
Query: 250 IKDSFETQGIVHSKLRDNRLPSSKMNQWKNWLRGHYQYDLSRIRWSRLIPQQWRNRVHQR 71
IKDSFETQG+VHSK D +LPS +MNQWKNWLRGHYQY LS+IRWSRLIP++WRN VH R
Sbjct: 919 IKDSFETQGMVHSKSADKKLPSYEMNQWKNWLRGHYQYHLSQIRWSRLIPEKWRNTVHPR 978
Query: 70 RMVKRKNLSKWNSYEKDQLIDYK 2
R+ K +N SKW+SYEKDQLI+ K
Sbjct: 979 RIAK-ENFSKWHSYEKDQLINSK 1000
>ref|YP_007353973.1| Ycf1 protein (chloroplast) [Tectona grandis]
gi|438687662|emb|CCP47191.1| YCF1 protein (chloroplast)
[Tectona grandis] gi|438688346|emb|CCP47280.1| YCF1
protein (chloroplast) [Tectona grandis]
gi|438688470|emb|CCP47369.1| YCF1 protein (chloroplast)
[Tectona grandis]
Length = 1898
Score = 135 bits (340), Expect = 1e-29
Identities = 63/83 (75%), Positives = 70/83 (84%)
Frame = -1
Query: 250 IKDSFETQGIVHSKLRDNRLPSSKMNQWKNWLRGHYQYDLSRIRWSRLIPQQWRNRVHQR 71
IKDSFETQGIVH KL D + PS +MNQWKNWLRG YQY LS+IRWSRLIP++WRN VHQ
Sbjct: 1290 IKDSFETQGIVHLKLADKKHPSYEMNQWKNWLRGRYQYHLSQIRWSRLIPEKWRNTVHQH 1349
Query: 70 RMVKRKNLSKWNSYEKDQLIDYK 2
R+ K+KNLSK SYEKDQLID K
Sbjct: 1350 RIAKKKNLSKRPSYEKDQLIDSK 1372
>ref|XP_011081446.1| PREDICTED: LOW QUALITY PROTEIN: protein TIC 214 [Sesamum indicum]
Length = 1759
Score = 133 bits (334), Expect = 5e-29
Identities = 62/84 (73%), Positives = 72/84 (85%), Gaps = 1/84 (1%)
Frame = -1
Query: 250 IKDSFETQGIVHSKLRDNRLPSSKMNQWKNWLRGHYQYDLSRIRWSRLIPQQWRNRVHQR 71
IKD FETQG+V SKL D +L S +MNQWKNWLRGHYQYDLS IRWSRLIP++WRNRVH+R
Sbjct: 1193 IKDFFETQGMVLSKLGDKKLRSYEMNQWKNWLRGHYQYDLSEIRWSRLIPEKWRNRVHRR 1252
Query: 70 RM-VKRKNLSKWNSYEKDQLIDYK 2
R+ K++NL KW+SYEKDQ ID K
Sbjct: 1253 RISXKKENLRKWHSYEKDQXIDSK 1276
>gb|ADD30913.1| putative RF1 protein (chloroplast) [Berberidopsis corallina]
Length = 1909
Score = 133 bits (334), Expect = 5e-29
Identities = 57/82 (69%), Positives = 71/82 (86%)
Frame = -1
Query: 247 KDSFETQGIVHSKLRDNRLPSSKMNQWKNWLRGHYQYDLSRIRWSRLIPQQWRNRVHQRR 68
KD F TQGI HS+LR +L +S MNQWKNWL+GHYQYDLS+IRWSRL+PQ+WRNR+++RR
Sbjct: 1271 KDYFGTQGIFHSELRHKKLRNSGMNQWKNWLKGHYQYDLSQIRWSRLVPQKWRNRINERR 1330
Query: 67 MVKRKNLSKWNSYEKDQLIDYK 2
+ K+L+KW+SYEKDQLI YK
Sbjct: 1331 TAQNKDLNKWDSYEKDQLIHYK 1352
>gb|ADD30906.1| putative RF1 protein (chloroplast) [Ilex cornuta]
Length = 1897
Score = 131 bits (330), Expect = 2e-28
Identities = 59/83 (71%), Positives = 70/83 (84%)
Frame = -1
Query: 250 IKDSFETQGIVHSKLRDNRLPSSKMNQWKNWLRGHYQYDLSRIRWSRLIPQQWRNRVHQR 71
IKDSF TQGI+HS+LR + S NQWKNWLRGHYQYDLS+IRWSRLIPQ+WRNRV+Q
Sbjct: 1257 IKDSFGTQGIIHSELRYKKFRSYGANQWKNWLRGHYQYDLSQIRWSRLIPQKWRNRVNQC 1316
Query: 70 RMVKRKNLSKWNSYEKDQLIDYK 2
R ++K+L KWNSYEK+QL+ YK
Sbjct: 1317 RTAQKKDLKKWNSYEKNQLLYYK 1339
>gb|AFI72631.1| Ycf1, partial [Lindernia dubia]
Length = 1523
Score = 130 bits (327), Expect = 3e-28
Identities = 56/83 (67%), Positives = 71/83 (85%)
Frame = -1
Query: 250 IKDSFETQGIVHSKLRDNRLPSSKMNQWKNWLRGHYQYDLSRIRWSRLIPQQWRNRVHQR 71
IKDSF+TQG+VHSKL D + P+ KMN WKNWLR HYQY+LS+ RWSRLIPQ+WRN V++R
Sbjct: 914 IKDSFQTQGMVHSKLGDKKFPNDKMNHWKNWLRRHYQYNLSQRRWSRLIPQEWRNTVNRR 973
Query: 70 RMVKRKNLSKWNSYEKDQLIDYK 2
R+ K++N KW+SYEK++LID K
Sbjct: 974 RIAKKENFIKWHSYEKNKLIDSK 996