BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00061227
         (390 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011081158.1| PREDICTED: DNA-directed RNA polymerase IV su...   202   7e-50
gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum ma...   194   1e-47
ref|XP_012835484.1| PREDICTED: DNA-directed RNA polymerase IV su...   191   2e-46
gb|EYU38999.1| hypothetical protein MIMGU_mgv1a000239mg [Erythra...   191   2e-46
ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricin...   173   4e-41
ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV su...   165   1e-38
ref|XP_010661369.1| PREDICTED: DNA-directed RNA polymerase IV su...   165   1e-38
ref|XP_010661365.1| PREDICTED: DNA-directed RNA polymerase IV su...   165   1e-38
emb|CBI34757.3| unnamed protein product [Vitis vinifera]              165   1e-38
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]   165   1e-38
ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV su...   164   2e-38
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su...   164   2e-38
ref|XP_010325436.1| PREDICTED: DNA-directed RNA polymerase IV su...   163   4e-38
ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase IV su...   163   4e-38
ref|XP_012476049.1| PREDICTED: DNA-directed RNA polymerase IV su...   162   1e-37
ref|XP_012476048.1| PREDICTED: DNA-directed RNA polymerase IV su...   162   1e-37
gb|KJB25756.1| hypothetical protein B456_004G207300 [Gossypium r...   162   1e-37
ref|XP_012476045.1| PREDICTED: DNA-directed RNA polymerase IV su...   162   1e-37
ref|XP_009797468.1| PREDICTED: DNA-directed RNA polymerase IV su...   162   1e-37
ref|XP_009797463.1| PREDICTED: DNA-directed RNA polymerase IV su...   162   1e-37

>ref|XP_011081158.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Sesamum
           indicum]
          Length = 1408

 Score =  202 bits (514), Expect = 7e-50
 Identities = 93/129 (72%), Positives = 110/129 (85%)
 Frame = -2

Query: 389 VVVGDSHIKVNEIGVPVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKN 210
           VVVGD  IKV+EIG+P QIA N+L+ DH+N+WNWDRLEPCCDFMLY++G  SV RNG++ 
Sbjct: 292 VVVGDPRIKVDEIGLPFQIAENVLISDHINLWNWDRLEPCCDFMLYRRGYFSVLRNGQRI 351

Query: 209 CIRSKYSLEGGDIIYRPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSP 30
           CI SK  L  GD I RPLIDGDI+LINRPPSIHQHSLIA+ V+ILP  SV+S+NP++CSP
Sbjct: 352 CIWSKDMLRTGDSICRPLIDGDIVLINRPPSIHQHSLIALSVRILPIKSVVSINPLVCSP 411

Query: 29  LRGDFDGDC 3
           LRGDFDGDC
Sbjct: 412 LRGDFDGDC 420


>gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum majus]
          Length = 1112

 Score =  194 bits (494), Expect = 1e-47
 Identities = 89/129 (68%), Positives = 107/129 (82%)
 Frame = -2

Query: 389 VVVGDSHIKVNEIGVPVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKN 210
           VVVGD  I+V+EIG+P++IA NMLV D++ +WNWD+LE CCD ML + G  SV R+G+K 
Sbjct: 4   VVVGDPRIRVDEIGLPIEIAKNMLVSDNIYLWNWDKLESCCDLMLRRNGQFSVTRDGQKT 63

Query: 209 CIRSKYSLEGGDIIYRPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSP 30
           C+RS   L  GD IYRPLIDGDI+LINRPPSIHQHSLIA+ VKILP NSV+S+NP+ CSP
Sbjct: 64  CVRSADMLRTGDSIYRPLIDGDIVLINRPPSIHQHSLIALSVKILPINSVVSINPLTCSP 123

Query: 29  LRGDFDGDC 3
           LRGDFDGDC
Sbjct: 124 LRGDFDGDC 132


>ref|XP_012835484.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Erythranthe
           guttatus] gi|848869730|ref|XP_012835485.1| PREDICTED:
           DNA-directed RNA polymerase IV subunit 1 [Erythranthe
           guttatus] gi|848869733|ref|XP_012835486.1| PREDICTED:
           DNA-directed RNA polymerase IV subunit 1 [Erythranthe
           guttatus]
          Length = 1447

 Score =  191 bits (484), Expect = 2e-46
 Identities = 87/129 (67%), Positives = 106/129 (82%)
 Frame = -2

Query: 389 VVVGDSHIKVNEIGVPVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKN 210
           VVVGD  I+V+EIG+P  +A NML+ DH+N+WNWD+LE CCDFML  KG+ S+ RNG++ 
Sbjct: 331 VVVGDPRIRVDEIGLPSHVAENMLIADHINLWNWDKLEVCCDFMLCHKGNFSILRNGERI 390

Query: 209 CIRSKYSLEGGDIIYRPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSP 30
            I SK  L  GD + RPLIDGDI+L+NRPPSIHQHSLIA+ VKILPT SV+S+NP+ICSP
Sbjct: 391 TIWSKDMLRTGDSLRRPLIDGDIVLVNRPPSIHQHSLIALSVKILPTTSVVSINPLICSP 450

Query: 29  LRGDFDGDC 3
            RGDFDGDC
Sbjct: 451 FRGDFDGDC 459


>gb|EYU38999.1| hypothetical protein MIMGU_mgv1a000239mg [Erythranthe guttata]
          Length = 1379

 Score =  191 bits (484), Expect = 2e-46
 Identities = 87/129 (67%), Positives = 106/129 (82%)
 Frame = -2

Query: 389 VVVGDSHIKVNEIGVPVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKN 210
           VVVGD  I+V+EIG+P  +A NML+ DH+N+WNWD+LE CCDFML  KG+ S+ RNG++ 
Sbjct: 301 VVVGDPRIRVDEIGLPSHVAENMLIADHINLWNWDKLEVCCDFMLCHKGNFSILRNGERI 360

Query: 209 CIRSKYSLEGGDIIYRPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSP 30
            I SK  L  GD + RPLIDGDI+L+NRPPSIHQHSLIA+ VKILPT SV+S+NP+ICSP
Sbjct: 361 TIWSKDMLRTGDSLRRPLIDGDIVLVNRPPSIHQHSLIALSVKILPTTSVVSINPLICSP 420

Query: 29  LRGDFDGDC 3
            RGDFDGDC
Sbjct: 421 FRGDFDGDC 429


>ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricinus communis]
           gi|223549595|gb|EEF51083.1| DNA-directed RNA polymerase,
           putative [Ricinus communis]
          Length = 1475

 Score =  173 bits (439), Expect = 4e-41
 Identities = 79/129 (61%), Positives = 97/129 (75%)
 Frame = -2

Query: 389 VVVGDSHIKVNEIGVPVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKN 210
           VVVGD +IK +EIG+P  IA  + + +HL  WNWD+L  CC+  L +KGD+ VRR GK  
Sbjct: 332 VVVGDPNIKFSEIGIPCPIAERLQISEHLTTWNWDKLNTCCEVRLLEKGDMHVRREGKLV 391

Query: 209 CIRSKYSLEGGDIIYRPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSP 30
            +R    L  GDIIYRPL DGD +LINRPPSIHQHSLIA+ VK+LP  SVL++NP+IC+P
Sbjct: 392 RVRRTKELRIGDIIYRPLNDGDTVLINRPPSIHQHSLIALSVKVLPATSVLAINPLICAP 451

Query: 29  LRGDFDGDC 3
            RGDFDGDC
Sbjct: 452 FRGDFDGDC 460


>ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X3
           [Vitis vinifera]
          Length = 1354

 Score =  165 bits (418), Expect = 1e-38
 Identities = 73/129 (56%), Positives = 96/129 (74%)
 Frame = -2

Query: 389 VVVGDSHIKVNEIGVPVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKN 210
           +VVGD  ++++EIG+P  IA  +L+ +HLN WNW+++   C+  L +KG   VRR G   
Sbjct: 220 IVVGDPKLRLSEIGIPCHIAEELLISEHLNSWNWEKVTNGCNLRLLEKGQTYVRRKGTLA 279

Query: 209 CIRSKYSLEGGDIIYRPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSP 30
            +R     + GDIIYRPL DGDI+LINRPPSIHQHS+IA+ VK+LP NSV+S+NP+ CSP
Sbjct: 280 PVRRMNDFQAGDIIYRPLTDGDIVLINRPPSIHQHSVIALSVKVLPLNSVVSINPLCCSP 339

Query: 29  LRGDFDGDC 3
            RGDFDGDC
Sbjct: 340 FRGDFDGDC 348


>ref|XP_010661369.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
           [Vitis vinifera]
          Length = 1458

 Score =  165 bits (418), Expect = 1e-38
 Identities = 73/129 (56%), Positives = 96/129 (74%)
 Frame = -2

Query: 389 VVVGDSHIKVNEIGVPVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKN 210
           +VVGD  ++++EIG+P  IA  +L+ +HLN WNW+++   C+  L +KG   VRR G   
Sbjct: 326 IVVGDPKLRLSEIGIPCHIAEELLISEHLNSWNWEKVTNGCNLRLLEKGQTYVRRKGTLA 385

Query: 209 CIRSKYSLEGGDIIYRPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSP 30
            +R     + GDIIYRPL DGDI+LINRPPSIHQHS+IA+ VK+LP NSV+S+NP+ CSP
Sbjct: 386 PVRRMNDFQAGDIIYRPLTDGDIVLINRPPSIHQHSVIALSVKVLPLNSVVSINPLCCSP 445

Query: 29  LRGDFDGDC 3
            RGDFDGDC
Sbjct: 446 FRGDFDGDC 454


>ref|XP_010661365.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
           [Vitis vinifera]
          Length = 1460

 Score =  165 bits (418), Expect = 1e-38
 Identities = 73/129 (56%), Positives = 96/129 (74%)
 Frame = -2

Query: 389 VVVGDSHIKVNEIGVPVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKN 210
           +VVGD  ++++EIG+P  IA  +L+ +HLN WNW+++   C+  L +KG   VRR G   
Sbjct: 326 IVVGDPKLRLSEIGIPCHIAEELLISEHLNSWNWEKVTNGCNLRLLEKGQTYVRRKGTLA 385

Query: 209 CIRSKYSLEGGDIIYRPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSP 30
            +R     + GDIIYRPL DGDI+LINRPPSIHQHS+IA+ VK+LP NSV+S+NP+ CSP
Sbjct: 386 PVRRMNDFQAGDIIYRPLTDGDIVLINRPPSIHQHSVIALSVKVLPLNSVVSINPLCCSP 445

Query: 29  LRGDFDGDC 3
            RGDFDGDC
Sbjct: 446 FRGDFDGDC 454


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  165 bits (418), Expect = 1e-38
 Identities = 73/129 (56%), Positives = 96/129 (74%)
 Frame = -2

Query: 389 VVVGDSHIKVNEIGVPVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKN 210
           +VVGD  ++++EIG+P  IA  +L+ +HLN WNW+++   C+  L +KG   VRR G   
Sbjct: 302 IVVGDPKLRLSEIGIPCHIAEELLISEHLNSWNWEKVTNGCNLRLLEKGQTYVRRKGTLA 361

Query: 209 CIRSKYSLEGGDIIYRPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSP 30
            +R     + GDIIYRPL DGDI+LINRPPSIHQHS+IA+ VK+LP NSV+S+NP+ CSP
Sbjct: 362 PVRRMNDFQAGDIIYRPLTDGDIVLINRPPSIHQHSVIALSVKVLPLNSVVSINPLCCSP 421

Query: 29  LRGDFDGDC 3
            RGDFDGDC
Sbjct: 422 FRGDFDGDC 430


>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
          Length = 1393

 Score =  165 bits (418), Expect = 1e-38
 Identities = 73/129 (56%), Positives = 96/129 (74%)
 Frame = -2

Query: 389 VVVGDSHIKVNEIGVPVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKN 210
           +VVGD  ++++EIG+P  IA  +L+ +HLN WNW+++   C+  L +KG   VRR G   
Sbjct: 329 IVVGDPKLRLSEIGIPCHIAEELLISEHLNSWNWEKVTNGCNLRLLEKGQTYVRRKGTLA 388

Query: 209 CIRSKYSLEGGDIIYRPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSP 30
            +R     + GDIIYRPL DGDI+LINRPPSIHQHS+IA+ VK+LP NSV+S+NP+ CSP
Sbjct: 389 PVRRMNDFQAGDIIYRPLTDGDIVLINRPPSIHQHSVIALSVKVLPLNSVVSINPLCCSP 448

Query: 29  LRGDFDGDC 3
            RGDFDGDC
Sbjct: 449 FRGDFDGDC 457


>ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
           [Solanum tuberosum]
          Length = 1233

 Score =  164 bits (416), Expect = 2e-38
 Identities = 76/129 (58%), Positives = 100/129 (77%)
 Frame = -2

Query: 389 VVVGDSHIKVNEIGVPVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKN 210
           VVVGD +I++ EIG+P  +A N+ + + L++ NW+R+   CD M+ Q+G I VRRNG   
Sbjct: 99  VVVGDPNIELGEIGIPCHVAENLHMAESLSLRNWERMTDLCDLMILQRGGILVRRNGVLV 158

Query: 209 CIRSKYSLEGGDIIYRPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSP 30
            I     L+ GDII+RPLIDGD+++INRPPSIHQHSLIA+ V+ILP NSVLS+NP++CSP
Sbjct: 159 RISVMDRLQNGDIIHRPLIDGDVVMINRPPSIHQHSLIALSVRILPINSVLSINPLVCSP 218

Query: 29  LRGDFDGDC 3
            RGDFDGDC
Sbjct: 219 FRGDFDGDC 227


>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
           [Solanum tuberosum]
          Length = 1446

 Score =  164 bits (416), Expect = 2e-38
 Identities = 76/129 (58%), Positives = 100/129 (77%)
 Frame = -2

Query: 389 VVVGDSHIKVNEIGVPVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKN 210
           VVVGD +I++ EIG+P  +A N+ + + L++ NW+R+   CD M+ Q+G I VRRNG   
Sbjct: 312 VVVGDPNIELGEIGIPCHVAENLHMAESLSLRNWERMTDLCDLMILQRGGILVRRNGVLV 371

Query: 209 CIRSKYSLEGGDIIYRPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSP 30
            I     L+ GDII+RPLIDGD+++INRPPSIHQHSLIA+ V+ILP NSVLS+NP++CSP
Sbjct: 372 RISVMDRLQNGDIIHRPLIDGDVVMINRPPSIHQHSLIALSVRILPINSVLSINPLVCSP 431

Query: 29  LRGDFDGDC 3
            RGDFDGDC
Sbjct: 432 FRGDFDGDC 440


>ref|XP_010325436.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
           [Solanum lycopersicum]
          Length = 1307

 Score =  163 bits (413), Expect = 4e-38
 Identities = 75/129 (58%), Positives = 100/129 (77%)
 Frame = -2

Query: 389 VVVGDSHIKVNEIGVPVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKN 210
           VVVGD +I++ EIG+P  +A N+ + + L++ NW+R+   CD M+ Q+G I VRRNG   
Sbjct: 173 VVVGDPNIELGEIGIPCHVAENLHMAETLSLRNWERMTDLCDLMILQRGGILVRRNGVLV 232

Query: 209 CIRSKYSLEGGDIIYRPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSP 30
            I     L+ GDII+RPL+DGD+++INRPPSIHQHSLIA+ V+ILP NSVLS+NP++CSP
Sbjct: 233 RISVMDGLQKGDIIHRPLVDGDVVMINRPPSIHQHSLIALSVRILPINSVLSINPLVCSP 292

Query: 29  LRGDFDGDC 3
            RGDFDGDC
Sbjct: 293 FRGDFDGDC 301


>ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
           [Solanum lycopersicum] gi|723724576|ref|XP_010325435.1|
           PREDICTED: DNA-directed RNA polymerase IV subunit 1
           isoform X1 [Solanum lycopersicum]
          Length = 1446

 Score =  163 bits (413), Expect = 4e-38
 Identities = 75/129 (58%), Positives = 100/129 (77%)
 Frame = -2

Query: 389 VVVGDSHIKVNEIGVPVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKN 210
           VVVGD +I++ EIG+P  +A N+ + + L++ NW+R+   CD M+ Q+G I VRRNG   
Sbjct: 312 VVVGDPNIELGEIGIPCHVAENLHMAETLSLRNWERMTDLCDLMILQRGGILVRRNGVLV 371

Query: 209 CIRSKYSLEGGDIIYRPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSP 30
            I     L+ GDII+RPL+DGD+++INRPPSIHQHSLIA+ V+ILP NSVLS+NP++CSP
Sbjct: 372 RISVMDGLQKGDIIHRPLVDGDVVMINRPPSIHQHSLIALSVRILPINSVLSINPLVCSP 431

Query: 29  LRGDFDGDC 3
            RGDFDGDC
Sbjct: 432 FRGDFDGDC 440


>ref|XP_012476049.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X3
           [Gossypium raimondii]
          Length = 1300

 Score =  162 bits (409), Expect = 1e-37
 Identities = 72/129 (55%), Positives = 98/129 (75%)
 Frame = -2

Query: 389 VVVGDSHIKVNEIGVPVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKN 210
           V+ G+ ++K++EIG+P  +A  + + + LN WN +RL+ CC+  + +KG+I +RR GK  
Sbjct: 340 VLTGNPNLKLSEIGIPCHVAEKLQIAEQLNRWNEERLKTCCNLRILEKGEIRIRREGKLV 399

Query: 209 CIRSKYSLEGGDIIYRPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSP 30
            IR    ++ GD IYRPL DGD +LINRPPSIHQHSLIA+ VK+LP NSV+S+NP+ICSP
Sbjct: 400 RIRHNEKVQVGDTIYRPLNDGDTVLINRPPSIHQHSLIALSVKVLPVNSVVSINPLICSP 459

Query: 29  LRGDFDGDC 3
            RGDFDGDC
Sbjct: 460 FRGDFDGDC 468


>ref|XP_012476048.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
           [Gossypium raimondii]
          Length = 1340

 Score =  162 bits (409), Expect = 1e-37
 Identities = 72/129 (55%), Positives = 98/129 (75%)
 Frame = -2

Query: 389 VVVGDSHIKVNEIGVPVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKN 210
           V+ G+ ++K++EIG+P  +A  + + + LN WN +RL+ CC+  + +KG+I +RR GK  
Sbjct: 199 VLTGNPNLKLSEIGIPCHVAEKLQIAEQLNRWNEERLKTCCNLRILEKGEIRIRREGKLV 258

Query: 209 CIRSKYSLEGGDIIYRPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSP 30
            IR    ++ GD IYRPL DGD +LINRPPSIHQHSLIA+ VK+LP NSV+S+NP+ICSP
Sbjct: 259 RIRHNEKVQVGDTIYRPLNDGDTVLINRPPSIHQHSLIALSVKVLPVNSVVSINPLICSP 318

Query: 29  LRGDFDGDC 3
            RGDFDGDC
Sbjct: 319 FRGDFDGDC 327


>gb|KJB25756.1| hypothetical protein B456_004G207300 [Gossypium raimondii]
          Length = 1478

 Score =  162 bits (409), Expect = 1e-37
 Identities = 72/129 (55%), Positives = 98/129 (75%)
 Frame = -2

Query: 389 VVVGDSHIKVNEIGVPVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKN 210
           V+ G+ ++K++EIG+P  +A  + + + LN WN +RL+ CC+  + +KG+I +RR GK  
Sbjct: 337 VLTGNPNLKLSEIGIPCHVAEKLQIAEQLNRWNEERLKTCCNLRILEKGEIRIRREGKLV 396

Query: 209 CIRSKYSLEGGDIIYRPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSP 30
            IR    ++ GD IYRPL DGD +LINRPPSIHQHSLIA+ VK+LP NSV+S+NP+ICSP
Sbjct: 397 RIRHNEKVQVGDTIYRPLNDGDTVLINRPPSIHQHSLIALSVKVLPVNSVVSINPLICSP 456

Query: 29  LRGDFDGDC 3
            RGDFDGDC
Sbjct: 457 FRGDFDGDC 465


>ref|XP_012476045.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
           [Gossypium raimondii] gi|823152441|ref|XP_012476046.1|
           PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
           isoform X1 [Gossypium raimondii]
           gi|763758424|gb|KJB25755.1| hypothetical protein
           B456_004G207300 [Gossypium raimondii]
           gi|763758426|gb|KJB25757.1| hypothetical protein
           B456_004G207300 [Gossypium raimondii]
          Length = 1481

 Score =  162 bits (409), Expect = 1e-37
 Identities = 72/129 (55%), Positives = 98/129 (75%)
 Frame = -2

Query: 389 VVVGDSHIKVNEIGVPVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKN 210
           V+ G+ ++K++EIG+P  +A  + + + LN WN +RL+ CC+  + +KG+I +RR GK  
Sbjct: 340 VLTGNPNLKLSEIGIPCHVAEKLQIAEQLNRWNEERLKTCCNLRILEKGEIRIRREGKLV 399

Query: 209 CIRSKYSLEGGDIIYRPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSP 30
            IR    ++ GD IYRPL DGD +LINRPPSIHQHSLIA+ VK+LP NSV+S+NP+ICSP
Sbjct: 400 RIRHNEKVQVGDTIYRPLNDGDTVLINRPPSIHQHSLIALSVKVLPVNSVVSINPLICSP 459

Query: 29  LRGDFDGDC 3
            RGDFDGDC
Sbjct: 460 FRGDFDGDC 468


>ref|XP_009797468.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
           [Nicotiana sylvestris]
          Length = 1254

 Score =  162 bits (409), Expect = 1e-37
 Identities = 78/129 (60%), Positives = 98/129 (75%)
 Frame = -2

Query: 389 VVVGDSHIKVNEIGVPVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKN 210
           VVVGD +IK+ EIG+P  +A ++ + + L+  NW++L   CD M+ QKG I VRRNG   
Sbjct: 115 VVVGDPNIKLGEIGIPCHVAEDLHMAEPLSSRNWEKLSDHCDLMILQKGAIHVRRNGVLV 174

Query: 209 CIRSKYSLEGGDIIYRPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSP 30
            I     L+ GDIIYRPLIDGD++LINRPPSIHQHSLIA+ V+ILP  SVLS+NP++CSP
Sbjct: 175 RISVMDQLQRGDIIYRPLIDGDVVLINRPPSIHQHSLIALSVRILPIISVLSINPLVCSP 234

Query: 29  LRGDFDGDC 3
            RGDFDGDC
Sbjct: 235 FRGDFDGDC 243


>ref|XP_009797463.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
           [Nicotiana sylvestris] gi|698503797|ref|XP_009797464.1|
           PREDICTED: DNA-directed RNA polymerase IV subunit 1
           isoform X1 [Nicotiana sylvestris]
           gi|698503800|ref|XP_009797465.1| PREDICTED: DNA-directed
           RNA polymerase IV subunit 1 isoform X1 [Nicotiana
           sylvestris] gi|698503802|ref|XP_009797466.1| PREDICTED:
           DNA-directed RNA polymerase IV subunit 1 isoform X1
           [Nicotiana sylvestris] gi|698503804|ref|XP_009797467.1|
           PREDICTED: DNA-directed RNA polymerase IV subunit 1
           isoform X1 [Nicotiana sylvestris]
          Length = 1447

 Score =  162 bits (409), Expect = 1e-37
 Identities = 78/129 (60%), Positives = 98/129 (75%)
 Frame = -2

Query: 389 VVVGDSHIKVNEIGVPVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKN 210
           VVVGD +IK+ EIG+P  +A ++ + + L+  NW++L   CD M+ QKG I VRRNG   
Sbjct: 308 VVVGDPNIKLGEIGIPCHVAEDLHMAEPLSSRNWEKLSDHCDLMILQKGAIHVRRNGVLV 367

Query: 209 CIRSKYSLEGGDIIYRPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSP 30
            I     L+ GDIIYRPLIDGD++LINRPPSIHQHSLIA+ V+ILP  SVLS+NP++CSP
Sbjct: 368 RISVMDQLQRGDIIYRPLIDGDVVLINRPPSIHQHSLIALSVRILPIISVLSINPLVCSP 427

Query: 29  LRGDFDGDC 3
            RGDFDGDC
Sbjct: 428 FRGDFDGDC 436