BLASTX nr result

ID: Forsythia22_contig00061110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00061110
         (254 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]                              65   2e-08
gb|AFB73912.1| polyprotein [Citrus sinensis]                           62   1e-07
gb|AFB73911.1| polyprotein [Citrus sinensis]                           60   4e-07

>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
          Length = 1298

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 31/46 (67%), Positives = 38/46 (82%)
 Frame = +3

Query: 6   NNILIDYLVFEDVAASVSKEEYRRKNKKDRSANSQQAETLSMTRGK 143
           NNIL DYLVF+DVAA+V +EE RRKNK+DR  N QQAE L++ RG+
Sbjct: 161 NNILTDYLVFDDVAAAVLEEESRRKNKEDRQVNLQQAEALTVMRGR 206


>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 31/46 (67%), Positives = 38/46 (82%)
 Frame = +3

Query: 6   NNILIDYLVFEDVAASVSKEEYRRKNKKDRSANSQQAETLSMTRGK 143
           NN  +D LVF+DVAASV  EE RRKNK++R A+SQQAE LS+TRG+
Sbjct: 160 NNNPVDSLVFDDVAASVLNEESRRKNKENRQASSQQAEALSVTRGR 205


>gb|AFB73911.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 30/46 (65%), Positives = 38/46 (82%)
 Frame = +3

Query: 6   NNILIDYLVFEDVAASVSKEEYRRKNKKDRSANSQQAETLSMTRGK 143
           NN  ++ LVF+DVAASV  EE RRKNK++R A+SQQAE LS+TRG+
Sbjct: 160 NNNPVESLVFDDVAASVLNEESRRKNKENRQASSQQAEALSVTRGR 205


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