BLASTX nr result

ID: Forsythia22_contig00061090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00061090
         (339 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007010390.1| Retrotransposon, unclassified-like protein [...    54   1e-10
ref|XP_007017131.1| Uncharacterized protein TCM_033752 [Theobrom...    50   3e-06

>ref|XP_007010390.1| Retrotransposon, unclassified-like protein [Theobroma cacao]
            gi|508727303|gb|EOY19200.1| Retrotransposon,
            unclassified-like protein [Theobroma cacao]
          Length = 1368

 Score = 53.5 bits (127), Expect(3) = 1e-10
 Identities = 25/44 (56%), Positives = 31/44 (70%)
 Frame = -2

Query: 335  VTFSLWKLWHRWLPVDEVLQQVMQIHLASKCQCCKAEETIGHVL 204
            V+F LW+  H WLPV EV  +   I LASKC CCK+EE++ HVL
Sbjct: 1004 VSFFLWRTLHNWLPV-EVRMKAKGIQLASKCLCCKSEESLLHVL 1046



 Score = 34.7 bits (78), Expect(3) = 1e-10
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = -1

Query: 201  MWESCGRVAQEIWTNFNDRF*FHPPPSSNPIMLFQYWRYAGYASSPGYSQIITPLVFF 28
            +WES   VAQ++W  F+  F  +     N + +   W Y+G  + PG+ + +  L  F
Sbjct: 1046 LWES--PVAQQVWNYFSKFFQIYVHNPQNILQILNSWYYSGDFTKPGHIRTLILLFIF 1101



 Score = 23.9 bits (50), Expect(3) = 1e-10
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -3

Query: 34   IFWYLWVEGNN 2
            IFW++WVE N+
Sbjct: 1100 IFWFVWVERND 1110


>ref|XP_007017131.1| Uncharacterized protein TCM_033752 [Theobroma cacao]
            gi|508722459|gb|EOY14356.1| Uncharacterized protein
            TCM_033752 [Theobroma cacao]
          Length = 2251

 Score = 50.1 bits (118), Expect(3) = 3e-06
 Identities = 21/43 (48%), Positives = 32/43 (74%)
 Frame = -2

Query: 332  TFSLWKLWHRWLPVDEVLQQVMQIHLASKCQCCKAEETIGHVL 204
            +F LW+L H W+PV E+  +   + LAS+C+CCK+EE+I HV+
Sbjct: 1921 SFFLWRLLHDWIPV-ELKMKSKGLQLASRCRCCKSEESIMHVM 1962



 Score = 23.9 bits (50), Expect(3) = 3e-06
 Identities = 14/55 (25%), Positives = 23/55 (41%)
 Frame = -1

Query: 201  MWESCGRVAQEIWTNFNDRF*FHPPPSSNPIMLFQYWRYAGYASSPGYSQIITPL 37
            MW++   VA ++W  F   F            +   W Y+G    PG+ + + PL
Sbjct: 1962 MWDN--PVAMQVWNYFAKLFQILIINPCTINQIIGAWFYSGDYCKPGHIRTLVPL 2014



 Score = 22.7 bits (47), Expect(3) = 3e-06
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 34   IFWYLWVEGNN 2
            I W+LWVE N+
Sbjct: 2016 ILWFLWVERND 2026


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