BLASTX nr result
ID: Forsythia22_contig00061090
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Forsythia22_contig00061090 (339 letters) Database: ./nr 69,698,275 sequences; 24,982,196,650 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_007010390.1| Retrotransposon, unclassified-like protein [... 54 1e-10 ref|XP_007017131.1| Uncharacterized protein TCM_033752 [Theobrom... 50 3e-06 >ref|XP_007010390.1| Retrotransposon, unclassified-like protein [Theobroma cacao] gi|508727303|gb|EOY19200.1| Retrotransposon, unclassified-like protein [Theobroma cacao] Length = 1368 Score = 53.5 bits (127), Expect(3) = 1e-10 Identities = 25/44 (56%), Positives = 31/44 (70%) Frame = -2 Query: 335 VTFSLWKLWHRWLPVDEVLQQVMQIHLASKCQCCKAEETIGHVL 204 V+F LW+ H WLPV EV + I LASKC CCK+EE++ HVL Sbjct: 1004 VSFFLWRTLHNWLPV-EVRMKAKGIQLASKCLCCKSEESLLHVL 1046 Score = 34.7 bits (78), Expect(3) = 1e-10 Identities = 17/58 (29%), Positives = 29/58 (50%) Frame = -1 Query: 201 MWESCGRVAQEIWTNFNDRF*FHPPPSSNPIMLFQYWRYAGYASSPGYSQIITPLVFF 28 +WES VAQ++W F+ F + N + + W Y+G + PG+ + + L F Sbjct: 1046 LWES--PVAQQVWNYFSKFFQIYVHNPQNILQILNSWYYSGDFTKPGHIRTLILLFIF 1101 Score = 23.9 bits (50), Expect(3) = 1e-10 Identities = 7/11 (63%), Positives = 10/11 (90%) Frame = -3 Query: 34 IFWYLWVEGNN 2 IFW++WVE N+ Sbjct: 1100 IFWFVWVERND 1110 >ref|XP_007017131.1| Uncharacterized protein TCM_033752 [Theobroma cacao] gi|508722459|gb|EOY14356.1| Uncharacterized protein TCM_033752 [Theobroma cacao] Length = 2251 Score = 50.1 bits (118), Expect(3) = 3e-06 Identities = 21/43 (48%), Positives = 32/43 (74%) Frame = -2 Query: 332 TFSLWKLWHRWLPVDEVLQQVMQIHLASKCQCCKAEETIGHVL 204 +F LW+L H W+PV E+ + + LAS+C+CCK+EE+I HV+ Sbjct: 1921 SFFLWRLLHDWIPV-ELKMKSKGLQLASRCRCCKSEESIMHVM 1962 Score = 23.9 bits (50), Expect(3) = 3e-06 Identities = 14/55 (25%), Positives = 23/55 (41%) Frame = -1 Query: 201 MWESCGRVAQEIWTNFNDRF*FHPPPSSNPIMLFQYWRYAGYASSPGYSQIITPL 37 MW++ VA ++W F F + W Y+G PG+ + + PL Sbjct: 1962 MWDN--PVAMQVWNYFAKLFQILIINPCTINQIIGAWFYSGDYCKPGHIRTLVPL 2014 Score = 22.7 bits (47), Expect(3) = 3e-06 Identities = 7/11 (63%), Positives = 9/11 (81%) Frame = -3 Query: 34 IFWYLWVEGNN 2 I W+LWVE N+ Sbjct: 2016 ILWFLWVERND 2026