BLASTX nr result

ID: Forsythia22_contig00060876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00060876
         (244 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011076168.1| PREDICTED: pentatricopeptide repeat-containi...    99   8e-19
ref|XP_012852087.1| PREDICTED: pentatricopeptide repeat-containi...    82   1e-13
ref|XP_009760811.1| PREDICTED: pentatricopeptide repeat-containi...    68   2e-09
ref|XP_010312104.1| PREDICTED: pentatricopeptide repeat-containi...    66   8e-09
ref|XP_009587538.1| PREDICTED: pentatricopeptide repeat-containi...    66   8e-09
ref|XP_004231241.1| PREDICTED: pentatricopeptide repeat-containi...    66   8e-09
ref|XP_006347788.1| PREDICTED: pentatricopeptide repeat-containi...    65   1e-08

>ref|XP_011076168.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g55630-like [Sesamum indicum]
          Length = 487

 Score = 99.4 bits (246), Expect = 8e-19
 Identities = 42/61 (68%), Positives = 50/61 (81%)
 Frame = -2

Query: 192 MYSVALSGPRIFKGFSCFCIILRRVCSRSFNGDDVENGFARVEDFLNESWKSLSCEYNVN 13
           MY+V L GPRIFKGFSCFC++ R +CSR  NGDDVENGF R+EDFLNESWKS   +Y+V 
Sbjct: 1   MYAVGLFGPRIFKGFSCFCVVTRTLCSRILNGDDVENGFGRIEDFLNESWKSSQIDYDVE 60

Query: 12  D 10
           +
Sbjct: 61  E 61


>ref|XP_012852087.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like [Erythranthe guttatus]
           gi|604306038|gb|EYU25095.1| hypothetical protein
           MIMGU_mgv1a005431mg [Erythranthe guttata]
          Length = 484

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 38/61 (62%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
 Frame = -2

Query: 192 MYSVALSGPRIFKGFSCFCIILRRVCSRSFNG-DDVENGFARVEDFLNESWKSLSCEYNV 16
           M+SVALS PRIF  FSC C++ R  C R FN  DDVENGF R+EDFLNESWKS + + N 
Sbjct: 1   MFSVALSTPRIFNRFSCLCVVSRTFCGRIFNNSDDVENGFGRIEDFLNESWKSSNLDNNT 60

Query: 15  N 13
           +
Sbjct: 61  S 61


>ref|XP_009760811.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like [Nicotiana sylvestris]
           gi|698527931|ref|XP_009760812.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g60050-like [Nicotiana sylvestris]
          Length = 497

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 30/61 (49%), Positives = 42/61 (68%)
 Frame = -2

Query: 192 MYSVALSGPRIFKGFSCFCIILRRVCSRSFNGDDVENGFARVEDFLNESWKSLSCEYNVN 13
           MYSVAL G R+ + FS F    R +C+R F+ D   NGF ++ED+LNESWKS++ + N+ 
Sbjct: 1   MYSVALFGQRVIQRFSYFSTFSRFLCNRQFDTDGTGNGFGKIEDYLNESWKSMNSDNNMK 60

Query: 12  D 10
           D
Sbjct: 61  D 61


>ref|XP_010312104.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like isoform X2 [Solanum lycopersicum]
          Length = 461

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 30/62 (48%), Positives = 41/62 (66%)
 Frame = -2

Query: 192 MYSVALSGPRIFKGFSCFCIILRRVCSRSFNGDDVENGFARVEDFLNESWKSLSCEYNVN 13
           MYSVAL G R+ + FS F    R +C++  N D   NGF R+ED+LNESWKS++   N+ 
Sbjct: 1   MYSVALFGQRVIQRFSYFSSFSRFLCNQQSNTDSTGNGFGRIEDYLNESWKSMNSNNNMK 60

Query: 12  DD 7
           D+
Sbjct: 61  DN 62


>ref|XP_009587538.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like [Nicotiana tomentosiformis]
           gi|697157568|ref|XP_009587539.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g60050-like [Nicotiana tomentosiformis]
          Length = 497

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 30/61 (49%), Positives = 41/61 (67%)
 Frame = -2

Query: 192 MYSVALSGPRIFKGFSCFCIILRRVCSRSFNGDDVENGFARVEDFLNESWKSLSCEYNVN 13
           MYSVAL G R+ + FS F    R +C+R F+ D   NGF ++ED+LNESWKS++   N+ 
Sbjct: 1   MYSVALFGQRVIQRFSYFSSFSRFLCNRQFDTDGTGNGFGKIEDYLNESWKSMNSGNNMK 60

Query: 12  D 10
           D
Sbjct: 61  D 61


>ref|XP_004231241.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like isoform X1 [Solanum lycopersicum]
           gi|723662132|ref|XP_010312097.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g60050-like isoform X1 [Solanum lycopersicum]
           gi|723662135|ref|XP_010312100.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g60050-like isoform X1 [Solanum lycopersicum]
          Length = 491

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 30/62 (48%), Positives = 41/62 (66%)
 Frame = -2

Query: 192 MYSVALSGPRIFKGFSCFCIILRRVCSRSFNGDDVENGFARVEDFLNESWKSLSCEYNVN 13
           MYSVAL G R+ + FS F    R +C++  N D   NGF R+ED+LNESWKS++   N+ 
Sbjct: 1   MYSVALFGQRVIQRFSYFSSFSRFLCNQQSNTDSTGNGFGRIEDYLNESWKSMNSNNNMK 60

Query: 12  DD 7
           D+
Sbjct: 61  DN 62


>ref|XP_006347788.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like [Solanum tuberosum]
          Length = 491

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 29/62 (46%), Positives = 42/62 (67%)
 Frame = -2

Query: 192 MYSVALSGPRIFKGFSCFCIILRRVCSRSFNGDDVENGFARVEDFLNESWKSLSCEYNVN 13
           MYSVAL G R+ + FS F    R +C++  N D   NGF ++ED+LNESWKS++ + N+ 
Sbjct: 1   MYSVALFGQRVIQRFSYFSSFSRFLCNQQSNTDGTGNGFGKIEDYLNESWKSMNSDNNMK 60

Query: 12  DD 7
           D+
Sbjct: 61  DN 62


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