BLASTX nr result

ID: Forsythia22_contig00060833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00060833
         (384 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006352418.1| PREDICTED: PHD finger protein MALE MEIOCYTE ...    46   2e-06
ref|XP_010312719.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger p...    46   5e-06
ref|XP_009789304.1| PREDICTED: PHD finger protein MALE MEIOCYTE ...    43   7e-06

>ref|XP_006352418.1| PREDICTED: PHD finger protein MALE MEIOCYTE DEATH 1-like [Solanum
           tuberosum]
          Length = 685

 Score = 45.8 bits (107), Expect(2) = 2e-06
 Identities = 23/57 (40%), Positives = 38/57 (66%)
 Frame = -1

Query: 171 DQSIAKEGSIECRKFNDVAIELDSRYPISRL*NVADALLKF*KKEDQTTRLVVGSCG 1
           ++S+ KE S+  RKF++VA  LDSR+P+ RL   AD +++  +++ +  R   GSCG
Sbjct: 311 NKSVGKEKSVRYRKFSNVAASLDSRWPVRRLEFTADVIVEALREKREAIRF--GSCG 365



 Score = 32.0 bits (71), Expect(2) = 2e-06
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = -2

Query: 377 NYSIVISYISSLKIDELILXXXXXXXXXXXXXXXSHYRDISKKELTTIRDLFEFL 213
           +Y   I  +SS+++DE+I                + YR +S   L T+RDLF F+
Sbjct: 222 HYEKAIEMLSSIELDEVIDDFRYISRSNVMKQVIACYRGLSNTPLITVRDLFRFI 276


>ref|XP_010312719.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein MALE MEIOCYTE
           DEATH 1-like [Solanum lycopersicum]
          Length = 761

 Score = 45.8 bits (107), Expect(2) = 5e-06
 Identities = 23/57 (40%), Positives = 38/57 (66%)
 Frame = -1

Query: 171 DQSIAKEGSIECRKFNDVAIELDSRYPISRL*NVADALLKF*KKEDQTTRLVVGSCG 1
           ++S+ KE S+  RKF++VA  LDSR+P+ RL   AD +++  +++ +  R   GSCG
Sbjct: 387 NKSVGKEKSVRYRKFSNVAASLDSRWPVRRLEFTADVIVEALREKREAIRF--GSCG 441



 Score = 30.8 bits (68), Expect(2) = 5e-06
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = -2

Query: 377 NYSIVISYISSLKIDELILXXXXXXXXXXXXXXXSHYRDISKKELTTIRDLFEFL 213
           +Y   I  +SS+++D++I                + YR +S   L T+RDLF F+
Sbjct: 298 HYEKAIEMLSSIELDQVIDDFRYISRSNVMKQVIACYRGLSNTPLITVRDLFRFI 352


>ref|XP_009789304.1| PREDICTED: PHD finger protein MALE MEIOCYTE DEATH 1 [Nicotiana
           sylvestris]
          Length = 688

 Score = 43.1 bits (100), Expect(2) = 7e-06
 Identities = 24/56 (42%), Positives = 34/56 (60%)
 Frame = -1

Query: 168 QSIAKEGSIECRKFNDVAIELDSRYPISRL*NVADALLKF*KKEDQTTRLVVGSCG 1
           +S  KE S   RKF+++A  LDSR+P+ RL   AD ++   K++  T R   GSCG
Sbjct: 317 KSEGKEKSARYRKFSNIAASLDSRWPVRRLEFTADVIVDALKEKKATNRF--GSCG 370



 Score = 33.1 bits (74), Expect(2) = 7e-06
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = -2

Query: 377 NYSIVISYISSLKIDELILXXXXXXXXXXXXXXXSHYRDISKKELTTIRDLFEFL 213
           NY   I  +SS+++D++I                  YR +S   L TIRDLF F+
Sbjct: 227 NYERAIEMLSSIELDQVIEDFRYSSRSNVMKQMVVCYRGLSDAPLITIRDLFRFM 281


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