BLASTX nr result
ID: Forsythia22_contig00060833
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Forsythia22_contig00060833 (384 letters) Database: ./nr 69,698,275 sequences; 24,982,196,650 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006352418.1| PREDICTED: PHD finger protein MALE MEIOCYTE ... 46 2e-06 ref|XP_010312719.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger p... 46 5e-06 ref|XP_009789304.1| PREDICTED: PHD finger protein MALE MEIOCYTE ... 43 7e-06 >ref|XP_006352418.1| PREDICTED: PHD finger protein MALE MEIOCYTE DEATH 1-like [Solanum tuberosum] Length = 685 Score = 45.8 bits (107), Expect(2) = 2e-06 Identities = 23/57 (40%), Positives = 38/57 (66%) Frame = -1 Query: 171 DQSIAKEGSIECRKFNDVAIELDSRYPISRL*NVADALLKF*KKEDQTTRLVVGSCG 1 ++S+ KE S+ RKF++VA LDSR+P+ RL AD +++ +++ + R GSCG Sbjct: 311 NKSVGKEKSVRYRKFSNVAASLDSRWPVRRLEFTADVIVEALREKREAIRF--GSCG 365 Score = 32.0 bits (71), Expect(2) = 2e-06 Identities = 17/55 (30%), Positives = 27/55 (49%) Frame = -2 Query: 377 NYSIVISYISSLKIDELILXXXXXXXXXXXXXXXSHYRDISKKELTTIRDLFEFL 213 +Y I +SS+++DE+I + YR +S L T+RDLF F+ Sbjct: 222 HYEKAIEMLSSIELDEVIDDFRYISRSNVMKQVIACYRGLSNTPLITVRDLFRFI 276 >ref|XP_010312719.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein MALE MEIOCYTE DEATH 1-like [Solanum lycopersicum] Length = 761 Score = 45.8 bits (107), Expect(2) = 5e-06 Identities = 23/57 (40%), Positives = 38/57 (66%) Frame = -1 Query: 171 DQSIAKEGSIECRKFNDVAIELDSRYPISRL*NVADALLKF*KKEDQTTRLVVGSCG 1 ++S+ KE S+ RKF++VA LDSR+P+ RL AD +++ +++ + R GSCG Sbjct: 387 NKSVGKEKSVRYRKFSNVAASLDSRWPVRRLEFTADVIVEALREKREAIRF--GSCG 441 Score = 30.8 bits (68), Expect(2) = 5e-06 Identities = 16/55 (29%), Positives = 27/55 (49%) Frame = -2 Query: 377 NYSIVISYISSLKIDELILXXXXXXXXXXXXXXXSHYRDISKKELTTIRDLFEFL 213 +Y I +SS+++D++I + YR +S L T+RDLF F+ Sbjct: 298 HYEKAIEMLSSIELDQVIDDFRYISRSNVMKQVIACYRGLSNTPLITVRDLFRFI 352 >ref|XP_009789304.1| PREDICTED: PHD finger protein MALE MEIOCYTE DEATH 1 [Nicotiana sylvestris] Length = 688 Score = 43.1 bits (100), Expect(2) = 7e-06 Identities = 24/56 (42%), Positives = 34/56 (60%) Frame = -1 Query: 168 QSIAKEGSIECRKFNDVAIELDSRYPISRL*NVADALLKF*KKEDQTTRLVVGSCG 1 +S KE S RKF+++A LDSR+P+ RL AD ++ K++ T R GSCG Sbjct: 317 KSEGKEKSARYRKFSNIAASLDSRWPVRRLEFTADVIVDALKEKKATNRF--GSCG 370 Score = 33.1 bits (74), Expect(2) = 7e-06 Identities = 18/55 (32%), Positives = 26/55 (47%) Frame = -2 Query: 377 NYSIVISYISSLKIDELILXXXXXXXXXXXXXXXSHYRDISKKELTTIRDLFEFL 213 NY I +SS+++D++I YR +S L TIRDLF F+ Sbjct: 227 NYERAIEMLSSIELDQVIEDFRYSSRSNVMKQMVVCYRGLSDAPLITIRDLFRFM 281