BLASTX nr result
ID: Forsythia22_contig00060778
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00060778
(754 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892... 342 2e-91
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 341 3e-91
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 332 1e-88
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 332 1e-88
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 330 4e-88
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 327 4e-87
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 327 5e-87
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 323 5e-86
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 323 9e-86
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] 322 1e-85
ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905... 322 2e-85
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 321 3e-85
gb|AAL31093.1|AC091749_22 putative retrotransposon-related prote... 319 1e-84
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 318 2e-84
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 317 4e-84
gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa... 315 1e-83
gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris] 314 4e-83
emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group] 313 7e-83
emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera] 313 9e-83
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc... 309 1e-81
>ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892119 [Beta vulgaris subsp.
vulgaris]
Length = 1947
Score = 342 bits (876), Expect = 2e-91
Identities = 173/250 (69%), Positives = 198/250 (79%)
Frame = -3
Query: 752 QREGVDYNEIFSPVVKHTSIRVLLSIVAHGDLELEQLDVKTAFLHGDLDE*IYMHQPEGY 573
QREGVDYNEIFSPVV+HTSIRVLL++VAH DLELEQLDVKTAFLHG+L+E I M QPEG+
Sbjct: 979 QREGVDYNEIFSPVVRHTSIRVLLAMVAHFDLELEQLDVKTAFLHGELEEDILMSQPEGF 1038
Query: 572 KVEDKERQVCRLRKSLYGLKQSPRQWYKRFDSFMLKHGFSRSEYDCCVYIRKLRGGDYIY 393
V KE+ C L+KSLYGLKQSPRQWYKRFDSFM++HGF RS YDCCVY K+ G YIY
Sbjct: 1039 VVPGKEKFACSLKKSLYGLKQSPRQWYKRFDSFMVEHGFDRSPYDCCVYHSKVEDGSYIY 1098
Query: 392 LLLYVDDMLIALKSNVEIDRLKSQLGKEFEMKDMGAAKKILGMEIKRERSNRKLFLSQKG 213
LLLYVDDMLIA K ++ +LK L EF+MKD+GAAKKILGMEI R+ +KLFLSQK
Sbjct: 1099 LLLYVDDMLIAAKKKSDVLKLKKLLSSEFDMKDLGAAKKILGMEIYRDHGRKKLFLSQKS 1158
Query: 212 YIKRVIARFGMQDAKSVVTPLAPHFRLSGKQSPTIAEEKARMEHVPYASVVGSLMYAMVC 33
YI +V+ RFGM AKS+ TP A + RLS SP EEK M VPYAS VGSLMYAMVC
Sbjct: 1159 YILKVLDRFGMSTAKSIDTPAAANARLSVVLSPQSDEEKEYMSKVPYASAVGSLMYAMVC 1218
Query: 32 TCPNISQAVS 3
T P+++ AVS
Sbjct: 1219 TRPDLAHAVS 1228
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 341 bits (874), Expect = 3e-91
Identities = 167/250 (66%), Positives = 201/250 (80%)
Frame = -3
Query: 752 QREGVDYNEIFSPVVKHTSIRVLLSIVAHGDLELEQLDVKTAFLHGDLDE*IYMHQPEGY 573
QREGVDYNEIFSPVV+HTSIRVLL+IVAH +LELEQLDVKTAFLHG+L+E IYM QP+G+
Sbjct: 866 QREGVDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEEIYMTQPDGF 925
Query: 572 KVEDKERQVCRLRKSLYGLKQSPRQWYKRFDSFMLKHGFSRSEYDCCVYIRKLRGGDYIY 393
+V KE VC+L+KSLYGLKQSPRQWYKRFDS+M+K G++RS YDCCVY +L +IY
Sbjct: 926 QVPGKENHVCKLKKSLYGLKQSPRQWYKRFDSYMVKLGYTRSSYDCCVYYNRLNDDSFIY 985
Query: 392 LLLYVDDMLIALKSNVEIDRLKSQLGKEFEMKDMGAAKKILGMEIKRERSNRKLFLSQKG 213
L+LYVDDMLIA K +I +LK L EFEMKD+GAA+KILGMEI R+R RKLFLSQ+
Sbjct: 986 LVLYVDDMLIAAKKKYDIQKLKGLLSAEFEMKDLGAARKILGMEIIRDRERRKLFLSQRS 1045
Query: 212 YIKRVIARFGMQDAKSVVTPLAPHFRLSGKQSPTIAEEKARMEHVPYASVVGSLMYAMVC 33
YI++V+ARFGM +K + TP A + L+ +P EEK M VPYAS VGSLMYAMVC
Sbjct: 1046 YIQKVLARFGMSSSKPIDTPSAANIHLTAMFAPQSEEEKEYMSRVPYASAVGSLMYAMVC 1105
Query: 32 TCPNISQAVS 3
T P+++ AVS
Sbjct: 1106 TRPDLAHAVS 1115
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 332 bits (852), Expect = 1e-88
Identities = 167/250 (66%), Positives = 199/250 (79%)
Frame = -3
Query: 752 QREGVDYNEIFSPVVKHTSIRVLLSIVAHGDLELEQLDVKTAFLHGDLDE*IYMHQPEGY 573
Q GVDYN++FSPVVKH+SIR LSIVA DLELEQLDVKTAFLHG+L+E IYM QPEG+
Sbjct: 892 QIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGF 951
Query: 572 KVEDKERQVCRLRKSLYGLKQSPRQWYKRFDSFMLKHGFSRSEYDCCVYIRKLRGGDYIY 393
V KE+ VC+L++SLYGLKQSPRQW KRFDSFML H F RS+YD CVYI+ + G IY
Sbjct: 952 IVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKHVNGSP-IY 1010
Query: 392 LLLYVDDMLIALKSNVEIDRLKSQLGKEFEMKDMGAAKKILGMEIKRERSNRKLFLSQKG 213
LLLYVDDMLIA KS +EI +LK L EF+MKD+G+AKKILGMEI R+R + LFLSQ
Sbjct: 1011 LLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHN 1070
Query: 212 YIKRVIARFGMQDAKSVVTPLAPHFRLSGKQSPTIAEEKARMEHVPYASVVGSLMYAMVC 33
YIK+V+ RF MQ+AK+V TP+APHF+LS Q P+I E M VPY+S VGSLMYAMVC
Sbjct: 1071 YIKKVLQRFNMQNAKAVSTPIAPHFKLSAAQCPSIDAEIEYMSRVPYSSAVGSLMYAMVC 1130
Query: 32 TCPNISQAVS 3
+ P++S A+S
Sbjct: 1131 SRPDLSYAMS 1140
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 332 bits (852), Expect = 1e-88
Identities = 167/250 (66%), Positives = 199/250 (79%)
Frame = -3
Query: 752 QREGVDYNEIFSPVVKHTSIRVLLSIVAHGDLELEQLDVKTAFLHGDLDE*IYMHQPEGY 573
Q GVDYN++FSPVVKH+SIR LSIVA DLELEQLDVKTAFLHG+L+E IYM QPEG+
Sbjct: 892 QIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGF 951
Query: 572 KVEDKERQVCRLRKSLYGLKQSPRQWYKRFDSFMLKHGFSRSEYDCCVYIRKLRGGDYIY 393
V KE+ VC+L++SLYGLKQSPRQW KRFDSFML H F RS+YD CVYI+ + G IY
Sbjct: 952 IVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKHVNGSP-IY 1010
Query: 392 LLLYVDDMLIALKSNVEIDRLKSQLGKEFEMKDMGAAKKILGMEIKRERSNRKLFLSQKG 213
LLLYVDDMLIA KS +EI +LK L EF+MKD+G+AKKILGMEI R+R + LFLSQ
Sbjct: 1011 LLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHN 1070
Query: 212 YIKRVIARFGMQDAKSVVTPLAPHFRLSGKQSPTIAEEKARMEHVPYASVVGSLMYAMVC 33
YIK+V+ RF MQ+AK+V TP+APHF+LS Q P+I E M VPY+S VGSLMYAMVC
Sbjct: 1071 YIKKVLQRFNMQNAKAVSTPIAPHFKLSAAQCPSIDAEIEYMSRVPYSSAVGSLMYAMVC 1130
Query: 32 TCPNISQAVS 3
+ P++S A+S
Sbjct: 1131 SRPDLSYAMS 1140
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 330 bits (847), Expect = 4e-88
Identities = 166/250 (66%), Positives = 198/250 (79%)
Frame = -3
Query: 752 QREGVDYNEIFSPVVKHTSIRVLLSIVAHGDLELEQLDVKTAFLHGDLDE*IYMHQPEGY 573
Q GVDYN++FSPVVKH+SIR LSIVA DLELEQLDVKTAFLHG+L+E IYM QPEG+
Sbjct: 894 QIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGF 953
Query: 572 KVEDKERQVCRLRKSLYGLKQSPRQWYKRFDSFMLKHGFSRSEYDCCVYIRKLRGGDYIY 393
V KE+ VC+L++SLYGLKQSPRQW KRFDSFML H F RS+YD CVYI+ + G IY
Sbjct: 954 IVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKHVNGSP-IY 1012
Query: 392 LLLYVDDMLIALKSNVEIDRLKSQLGKEFEMKDMGAAKKILGMEIKRERSNRKLFLSQKG 213
LLLYVDDMLIA KS +EI +LK L EF+MKD+G+AKKILGMEI R+R + LFLSQ
Sbjct: 1013 LLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHN 1072
Query: 212 YIKRVIARFGMQDAKSVVTPLAPHFRLSGKQSPTIAEEKARMEHVPYASVVGSLMYAMVC 33
YIK+V+ RF MQ+AK+V TP+APHF+LS Q P+ E M VPY+S VGSLMYAMVC
Sbjct: 1073 YIKKVLQRFNMQNAKAVSTPIAPHFKLSAAQCPSTDAEIEYMSRVPYSSAVGSLMYAMVC 1132
Query: 32 TCPNISQAVS 3
+ P++S A+S
Sbjct: 1133 SRPDLSYAMS 1142
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 327 bits (839), Expect = 4e-87
Identities = 166/250 (66%), Positives = 194/250 (77%)
Frame = -3
Query: 752 QREGVDYNEIFSPVVKHTSIRVLLSIVAHGDLELEQLDVKTAFLHGDLDE*IYMHQPEGY 573
Q GVDYN++FSPVVKH+SIR SIV DLELEQLDVKT FLHG+L+E IYM QPEG+
Sbjct: 881 QIAGVDYNDVFSPVVKHSSIRTFFSIVTMHDLELEQLDVKTTFLHGELEEEIYMDQPEGF 940
Query: 572 KVEDKERQVCRLRKSLYGLKQSPRQWYKRFDSFMLKHGFSRSEYDCCVYIRKLRGGDYIY 393
V KE VC+L++SLYGLKQSPRQWYKRFDSFML HGF RSE+D CVYI K G IY
Sbjct: 941 IVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYI-KFVNGSPIY 999
Query: 392 LLLYVDDMLIALKSNVEIDRLKSQLGKEFEMKDMGAAKKILGMEIKRERSNRKLFLSQKG 213
LLLYVDDMLIA KS +I LK QL EF+MKD+GAAKKILGMEI R+R++ LFLSQ+
Sbjct: 1000 LLLYVDDMLIAAKSKEQITTLKKQLSSEFDMKDLGAAKKILGMEITRDRNSGLLFLSQQS 1059
Query: 212 YIKRVIARFGMQDAKSVVTPLAPHFRLSGKQSPTIAEEKARMEHVPYASVVGSLMYAMVC 33
YIK+V+ RF M DAK V TP+APHF+LS Q + E+ M VPY+S VGSLMYAMVC
Sbjct: 1060 YIKKVLQRFNMHDAKPVSTPIAPHFKLSALQCASTDEDVEYMSRVPYSSAVGSLMYAMVC 1119
Query: 32 TCPNISQAVS 3
+ P++S A+S
Sbjct: 1120 SWPDLSHAMS 1129
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 327 bits (838), Expect = 5e-87
Identities = 165/250 (66%), Positives = 197/250 (78%)
Frame = -3
Query: 752 QREGVDYNEIFSPVVKHTSIRVLLSIVAHGDLELEQLDVKTAFLHGDLDE*IYMHQPEGY 573
Q GVDYN++FSPVVKH+SIR LSIVA DLELEQLDVKTAFLHG+L+E IYM QPEG+
Sbjct: 892 QIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGF 951
Query: 572 KVEDKERQVCRLRKSLYGLKQSPRQWYKRFDSFMLKHGFSRSEYDCCVYIRKLRGGDYIY 393
V KE+ VC+L++SLYGLKQSPRQW KRFDSFML H F RS+YD CVYI+ + G IY
Sbjct: 952 IVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKHVNGSP-IY 1010
Query: 392 LLLYVDDMLIALKSNVEIDRLKSQLGKEFEMKDMGAAKKILGMEIKRERSNRKLFLSQKG 213
LLLYVDDMLIA KS +EI +LK L EF+MKD+G+AKKIL MEI R+R + LFLSQ
Sbjct: 1011 LLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILVMEISRDRKSGLLFLSQHN 1070
Query: 212 YIKRVIARFGMQDAKSVVTPLAPHFRLSGKQSPTIAEEKARMEHVPYASVVGSLMYAMVC 33
YIK+V+ RF MQ+AK+V TP+APHF+LS Q P+ E M VPY+S VGSLMYAMVC
Sbjct: 1071 YIKKVLQRFNMQNAKAVSTPIAPHFKLSAAQCPSTDAEIEYMSRVPYSSAVGSLMYAMVC 1130
Query: 32 TCPNISQAVS 3
+ P++S A+S
Sbjct: 1131 SRPDLSYAMS 1140
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 323 bits (829), Expect = 5e-86
Identities = 164/247 (66%), Positives = 193/247 (78%)
Frame = -3
Query: 743 GVDYNEIFSPVVKHTSIRVLLSIVAHGDLELEQLDVKTAFLHGDLDE*IYMHQPEGYKVE 564
GVDYN++FSPVVKH+SIR SIVA DLELEQLDVKTAFLHG+L+E IYM QPEG+ V
Sbjct: 884 GVDYNDVFSPVVKHSSIRTFFSIVAMHDLELEQLDVKTAFLHGELEEEIYMDQPEGFIVP 943
Query: 563 DKERQVCRLRKSLYGLKQSPRQWYKRFDSFMLKHGFSRSEYDCCVYIRKLRGGDYIYLLL 384
KE VC+L++SLYGLKQSPRQWYKRFDSFML HGF RSE+D CVYI K G IYLLL
Sbjct: 944 GKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYI-KFVNGSPIYLLL 1002
Query: 383 YVDDMLIALKSNVEIDRLKSQLGKEFEMKDMGAAKKILGMEIKRERSNRKLFLSQKGYIK 204
YVDD+LIA KS +I LK QL EF+MKD+GAAKKILGMEI R++++ LFLSQ+ YIK
Sbjct: 1003 YVDDILIAAKSKEQITTLKKQLSSEFDMKDLGAAKKILGMEITRDKNSGLLFLSQQSYIK 1062
Query: 203 RVIARFGMQDAKSVVTPLAPHFRLSGKQSPTIAEEKARMEHVPYASVVGSLMYAMVCTCP 24
+V+ F M DAK V TP+APHF+LS Q E+ M VPY+S VGSLMYAMVC+ P
Sbjct: 1063 KVLQCFNMHDAKPVSTPIAPHFKLSALQCANTDEDVEYMSRVPYSSAVGSLMYAMVCSRP 1122
Query: 23 NISQAVS 3
++S A+S
Sbjct: 1123 DLSHAMS 1129
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 323 bits (827), Expect = 9e-86
Identities = 166/250 (66%), Positives = 194/250 (77%)
Frame = -3
Query: 752 QREGVDYNEIFSPVVKHTSIRVLLSIVAHGDLELEQLDVKTAFLHGDLDE*IYMHQPEGY 573
Q G+D+N++FSPVVKH+SIR LLSIVA D ELEQ+DVKTAFLHG+L+E IYM QP+G+
Sbjct: 1098 QIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPKGF 1157
Query: 572 KVEDKERQVCRLRKSLYGLKQSPRQWYKRFDSFMLKHGFSRSEYDCCVYIRKLRGGDYIY 393
V KE VCRL+KSLYGLKQSPRQWYKRFDSFML F RS YD CVY+ K+ G IY
Sbjct: 1158 VVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYL-KVVDGSAIY 1216
Query: 392 LLLYVDDMLIALKSNVEIDRLKSQLGKEFEMKDMGAAKKILGMEIKRERSNRKLFLSQKG 213
LLLYVDDMLIA K EI +LK+QL EFEMKD+GAAKKILGMEI R+R + KL+LSQKG
Sbjct: 1217 LLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRKRHSFKLYLSQKG 1276
Query: 212 YIKRVIARFGMQDAKSVVTPLAPHFRLSGKQSPTIAEEKARMEHVPYASVVGSLMYAMVC 33
YI++V+ RF M DAK V TPLA HFRLS P + M VPY+S VGSLMYAMVC
Sbjct: 1277 YIEKVLRRFNMHDAKPVSTPLAAHFRLSSDLCPQSDYDIEYMSRVPYSSAVGSLMYAMVC 1336
Query: 32 TCPNISQAVS 3
+ P++S A+S
Sbjct: 1337 SRPDLSHALS 1346
>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
Length = 1297
Score = 322 bits (826), Expect = 1e-85
Identities = 157/250 (62%), Positives = 200/250 (80%)
Frame = -3
Query: 752 QREGVDYNEIFSPVVKHTSIRVLLSIVAHGDLELEQLDVKTAFLHGDLDE*IYMHQPEGY 573
Q+EGVDY+EIFSPVVKHTSIR+LLSI A D+E+EQ+DVKTAFLHGDL+E IYM QPEG+
Sbjct: 857 QKEGVDYDEIFSPVVKHTSIRLLLSIAAQYDMEIEQMDVKTAFLHGDLEEDIYMSQPEGF 916
Query: 572 KVEDKERQVCRLRKSLYGLKQSPRQWYKRFDSFMLKHGFSRSEYDCCVYIRKLRGGDYIY 393
KE VCRL+KSLYGLKQSPRQWYK FD++MLK G++R +YDCCVY G I
Sbjct: 917 VETGKENLVCRLKKSLYGLKQSPRQWYKPFDTYMLKIGYTRCQYDCCVYYHVFEDGKVIL 976
Query: 392 LLLYVDDMLIALKSNVEIDRLKSQLGKEFEMKDMGAAKKILGMEIKRERSNRKLFLSQKG 213
LLLYVDDMLIA + ++I +LK +LG EF+MKD+GAA+KILG+EI+R+R+ K++LSQ+
Sbjct: 977 LLLYVDDMLIACRDMLQIQKLKKKLGAEFDMKDLGAAQKILGIEIRRDRNAGKIWLSQEK 1036
Query: 212 YIKRVIARFGMQDAKSVVTPLAPHFRLSGKQSPTIAEEKARMEHVPYASVVGSLMYAMVC 33
YI +++ RF M +AK V PLA HFRLS +Q P+ +E M++VPYAS VG LMYAM+C
Sbjct: 1037 YIMKILERFNMAEAKVVSIPLAAHFRLSAEQRPSDQKEIDMMKNVPYASAVGCLMYAMIC 1096
Query: 32 TCPNISQAVS 3
T P+++QA+S
Sbjct: 1097 TRPDLAQAMS 1106
>ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905624 [Beta vulgaris subsp.
vulgaris]
Length = 2676
Score = 322 bits (824), Expect = 2e-85
Identities = 159/250 (63%), Positives = 196/250 (78%)
Frame = -3
Query: 752 QREGVDYNEIFSPVVKHTSIRVLLSIVAHGDLELEQLDVKTAFLHGDLDE*IYMHQPEGY 573
Q EGVD++E+F PVVKH+SIRVLL++ A DLEL QLDVKTAFLHGDL+E IYM QP+G+
Sbjct: 743 QVEGVDFHEVFPPVVKHSSIRVLLALEAMEDLELHQLDVKTAFLHGDLEEEIYMKQPKGF 802
Query: 572 KVEDKERQVCRLRKSLYGLKQSPRQWYKRFDSFMLKHGFSRSEYDCCVYIRKLRGGDYIY 393
+VE KE VCRL KSLYGLKQSPRQWY+RFDSFML H F+RS YD CVY ++L G +IY
Sbjct: 803 EVEGKEEHVCRLVKSLYGLKQSPRQWYRRFDSFMLAHEFTRSSYDSCVYYKELVSGSFIY 862
Query: 392 LLLYVDDMLIALKSNVEIDRLKSQLGKEFEMKDMGAAKKILGMEIKRERSNRKLFLSQKG 213
LLLYVDDML+A K +E++ LK L F+MK++G AKKILGMEI R+RS L+LSQ+
Sbjct: 863 LLLYVDDMLVACKHLIEVNNLKKLLNSGFDMKNLGEAKKILGMEIWRDRSKGVLYLSQRR 922
Query: 212 YIKRVIARFGMQDAKSVVTPLAPHFRLSGKQSPTIAEEKARMEHVPYASVVGSLMYAMVC 33
YI++V+ RF M +AK V TPL HF+LS + P EE+ M H+PY S VGS+MYAMVC
Sbjct: 923 YIEKVLERFSMNNAKPVSTPLGSHFKLSKELCPQSEEEERAMAHIPYTSAVGSVMYAMVC 982
Query: 32 TCPNISQAVS 3
+ P+I+QAVS
Sbjct: 983 SRPDIAQAVS 992
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 321 bits (822), Expect = 3e-85
Identities = 165/250 (66%), Positives = 192/250 (76%)
Frame = -3
Query: 752 QREGVDYNEIFSPVVKHTSIRVLLSIVAHGDLELEQLDVKTAFLHGDLDE*IYMHQPEGY 573
Q G+D+N++FSPVVKH+SIR LL IVA D ELEQ++VKTAFLHG+L+E IYM QPEG+
Sbjct: 863 QIPGIDFNDVFSPVVKHSSIRTLLGIVAMHDYELEQMNVKTAFLHGELEEDIYMEQPEGF 922
Query: 572 KVEDKERQVCRLRKSLYGLKQSPRQWYKRFDSFMLKHGFSRSEYDCCVYIRKLRGGDYIY 393
V KE VCRL+KSLYGLKQSPRQWYKRFDSFML F S YD CVY+ K+ G IY
Sbjct: 923 VVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRISNYDSCVYL-KVVDGSVIY 981
Query: 392 LLLYVDDMLIALKSNVEIDRLKSQLGKEFEMKDMGAAKKILGMEIKRERSNRKLFLSQKG 213
LLLYVDDMLIA K EI++LK+QL EFEMKD+GAAKKILGMEI RER + KL+LSQKG
Sbjct: 982 LLLYVDDMLIAAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKG 1041
Query: 212 YIKRVIARFGMQDAKSVVTPLAPHFRLSGKQSPTIAEEKARMEHVPYASVVGSLMYAMVC 33
YI++V+ RF M DAK V TPLA HFRLS P + M VPY+S VGSLMYAMVC
Sbjct: 1042 YIEKVLRRFNMHDAKPVSTPLAAHFRLSSDLCPLSDYDIEYMSRVPYSSAVGSLMYAMVC 1101
Query: 32 TCPNISQAVS 3
P++S A+S
Sbjct: 1102 CRPDLSHALS 1111
>gb|AAL31093.1|AC091749_22 putative retrotransposon-related protein [Oryza sativa Japonica
Group] gi|22655747|gb|AAN04164.1| Putative
retrotransposon protein [Oryza sativa Japonica Group]
gi|31431214|gb|AAP53029.1| retrotransposon protein,
putative, Ty1-copia subclass, expressed [Oryza sativa
Japonica Group]
Length = 1229
Score = 319 bits (818), Expect = 1e-84
Identities = 163/250 (65%), Positives = 193/250 (77%)
Frame = -3
Query: 752 QREGVDYNEIFSPVVKHTSIRVLLSIVAHGDLELEQLDVKTAFLHGDLDE*IYMHQPEGY 573
Q GVDYN++FSPVVKH+SIR IVA DLELEQLDVKT FLHG+L+E IYM QPEG+
Sbjct: 827 QIAGVDYNDVFSPVVKHSSIRTFFCIVAMHDLELEQLDVKTIFLHGELEEEIYMDQPEGF 886
Query: 572 KVEDKERQVCRLRKSLYGLKQSPRQWYKRFDSFMLKHGFSRSEYDCCVYIRKLRGGDYIY 393
V KE VC+L++SLYGLKQSPRQWYKRFDSFML HGF RSE+D CVYI K G +IY
Sbjct: 887 IVPGKEDDVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYI-KFVNGSHIY 945
Query: 392 LLLYVDDMLIALKSNVEIDRLKSQLGKEFEMKDMGAAKKILGMEIKRERSNRKLFLSQKG 213
LLLYVDDMLIA KS +I LK QL EF+MKD+ A+KKILGMEI R+ ++ LFLSQ+
Sbjct: 946 LLLYVDDMLIAAKSKEQITTLKKQLSSEFDMKDLVASKKILGMEITRDINSGLLFLSQQS 1005
Query: 212 YIKRVIARFGMQDAKSVVTPLAPHFRLSGKQSPTIAEEKARMEHVPYASVVGSLMYAMVC 33
YIK+V+ RF + DAK V TP+APHF+LS Q + E+ M VPY+SVVGSLMYAMVC
Sbjct: 1006 YIKKVLQRFNIHDAKPVSTPIAPHFKLSALQCTSTDEDVEYMSRVPYSSVVGSLMYAMVC 1065
Query: 32 TCPNISQAVS 3
+ P +S A+S
Sbjct: 1066 SRPVLSHAMS 1075
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 318 bits (815), Expect = 2e-84
Identities = 166/250 (66%), Positives = 192/250 (76%)
Frame = -3
Query: 752 QREGVDYNEIFSPVVKHTSIRVLLSIVAHGDLELEQLDVKTAFLHGDLDE*IYMHQPEGY 573
Q G+D+N++FSPVVKH+SIR LLSIVA D ELEQ+DVKTAFLHG+L+E IYM QPEG+
Sbjct: 800 QIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGF 859
Query: 572 KVEDKERQVCRLRKSLYGLKQSPRQWYKRFDSFMLKHGFSRSEYDCCVYIRKLRGGDYIY 393
V KE VCRL+KSLYGLKQSPRQWYKRFDSFML F RS YD CVY+ K+ G IY
Sbjct: 860 VVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYL-KVVDGSAIY 918
Query: 392 LLLYVDDMLIALKSNVEIDRLKSQLGKEFEMKDMGAAKKILGMEIKRERSNRKLFLSQKG 213
LLLYVDDMLIA K EI +LK+QL EFEMKD+GAAKKILGMEI RER + KL+LSQK
Sbjct: 919 LLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKC 978
Query: 212 YIKRVIARFGMQDAKSVVTPLAPHFRLSGKQSPTIAEEKARMEHVPYASVVGSLMYAMVC 33
YI++V+ RF M DAK V T LA HFRLS P A + M VPY+S V SLMYAMVC
Sbjct: 979 YIEKVLHRFNMHDAKLVSTLLAAHFRLSSDLCPQSAYDIEYMSRVPYSSAVSSLMYAMVC 1038
Query: 32 TCPNISQAVS 3
+ P++S A+S
Sbjct: 1039 SRPDLSHALS 1048
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 317 bits (813), Expect = 4e-84
Identities = 165/250 (66%), Positives = 192/250 (76%)
Frame = -3
Query: 752 QREGVDYNEIFSPVVKHTSIRVLLSIVAHGDLELEQLDVKTAFLHGDLDE*IYMHQPEGY 573
Q G+D+N++FSPV+KH+SIR LLSIVA D ELEQ+DVKTAFLHG+L+E IYM QPEG+
Sbjct: 770 QIPGIDFNDVFSPVLKHSSIRTLLSIVAVHDYELEQMDVKTAFLHGELEEDIYMEQPEGF 829
Query: 572 KVEDKERQVCRLRKSLYGLKQSPRQWYKRFDSFMLKHGFSRSEYDCCVYIRKLRGGDYIY 393
V KE V RL+KSLYGLKQSPRQWYKRFDSFM F RS YD CVY+ K+ G IY
Sbjct: 830 VVPGKENLVYRLKKSLYGLKQSPRQWYKRFDSFMFSQKFRRSNYDSCVYL-KVVDGSSIY 888
Query: 392 LLLYVDDMLIALKSNVEIDRLKSQLGKEFEMKDMGAAKKILGMEIKRERSNRKLFLSQKG 213
LLLYVDDMLIA K EI++LK+QL EFEMKD+GAAKKILGMEI RER + KL+LSQKG
Sbjct: 889 LLLYVDDMLIAAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKG 948
Query: 212 YIKRVIARFGMQDAKSVVTPLAPHFRLSGKQSPTIAEEKARMEHVPYASVVGSLMYAMVC 33
YI++V+ RF M DAK V TPLA HFRLS P + M VPY SVVGSLMYAMVC
Sbjct: 949 YIEKVLRRFNMHDAKPVSTPLAAHFRLSSDLCPQSDYDIEYMSRVPYLSVVGSLMYAMVC 1008
Query: 32 TCPNISQAVS 3
+ ++S A+S
Sbjct: 1009 SRLDLSHALS 1018
>gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa Japonica Group]
gi|18542925|gb|AAL75759.1| Putative pol polyprotein
[Oryza sativa Japonica Group] gi|31429763|gb|AAP51772.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1005
Score = 315 bits (808), Expect = 1e-83
Identities = 164/250 (65%), Positives = 191/250 (76%)
Frame = -3
Query: 752 QREGVDYNEIFSPVVKHTSIRVLLSIVAHGDLELEQLDVKTAFLHGDLDE*IYMHQPEGY 573
Q GVDYN++FSPVVKH+SIR SIVA DLELEQLDVKTAFLHG+L+E IYM QPEG+
Sbjct: 565 QIAGVDYNDVFSPVVKHSSIRTFFSIVAMHDLELEQLDVKTAFLHGELEEEIYMDQPEGF 624
Query: 572 KVEDKERQVCRLRKSLYGLKQSPRQWYKRFDSFMLKHGFSRSEYDCCVYIRKLRGGDYIY 393
V KE VC+L++S YGLKQSPRQWYKRFD FML HGF RSE+D CVYI K G IY
Sbjct: 625 IVPGKEGYVCKLKRSFYGLKQSPRQWYKRFDLFMLSHGFKRSEFDSCVYI-KFVNGSPIY 683
Query: 392 LLLYVDDMLIALKSNVEIDRLKSQLGKEFEMKDMGAAKKILGMEIKRERSNRKLFLSQKG 213
LLYVDDMLIA KS +I LK QL EF+MKD+GAAKKILGMEI R+R++ LFLSQ+
Sbjct: 684 -LLYVDDMLIAAKSKEQITTLKKQLSSEFDMKDLGAAKKILGMEITRDRNSGLLFLSQQS 742
Query: 212 YIKRVIARFGMQDAKSVVTPLAPHFRLSGKQSPTIAEEKARMEHVPYASVVGSLMYAMVC 33
YIK V+ RF M DAK V P+APHF+LS Q + E+ M VPY+S VGSLMYAMVC
Sbjct: 743 YIKNVLQRFNMHDAKLVSIPIAPHFKLSVLQCASTDEDVEYMSRVPYSSAVGSLMYAMVC 802
Query: 32 TCPNISQAVS 3
+ P++S A+S
Sbjct: 803 SRPDLSHAMS 812
>gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]
Length = 1556
Score = 314 bits (804), Expect = 4e-83
Identities = 154/249 (61%), Positives = 197/249 (79%)
Frame = -3
Query: 752 QREGVDYNEIFSPVVKHTSIRVLLSIVAHGDLELEQLDVKTAFLHGDLDE*IYMHQPEGY 573
QR+G+D+NEIFSPVVK +SIR++LS+ A DLE+EQ+DVKTAFLHGDL+E IYM QP+G+
Sbjct: 829 QRKGIDFNEIFSPVVKMSSIRIVLSLAATLDLEVEQMDVKTAFLHGDLEEEIYMKQPDGF 888
Query: 572 KVEDKERQVCRLRKSLYGLKQSPRQWYKRFDSFMLKHGFSRSEYDCCVYIRKLRGGDYIY 393
VE KE VCRLRKSLYGLKQ+PRQWYK+F+S M + G+ ++ D CV+++K D+I
Sbjct: 889 LVEGKEDHVCRLRKSLYGLKQAPRQWYKKFESVMCEQGYKKTTSDHCVFVKKFANDDFII 948
Query: 392 LLLYVDDMLIALKSNVEIDRLKSQLGKEFEMKDMGAAKKILGMEIKRERSNRKLFLSQKG 213
LLLYVDD+LI K I+RLK QL + F MKDMGAAK+ILG+ I R+R +KL+LSQ+
Sbjct: 949 LLLYVDDILIVGKDISMINRLKKQLSESFAMKDMGAAKQILGIRIMRDRQEKKLWLSQEN 1008
Query: 212 YIKRVIARFGMQDAKSVVTPLAPHFRLSGKQSPTIAEEKARMEHVPYASVVGSLMYAMVC 33
Y+KRV+ RF M++AK V TPLA HF+LS KQSP+ EK+ M+ +PYAS VGSLMYAMVC
Sbjct: 1009 YVKRVLQRFQMENAKVVSTPLATHFKLSTKQSPSYEYEKSDMQRIPYASAVGSLMYAMVC 1068
Query: 32 TCPNISQAV 6
T P+I+ V
Sbjct: 1069 TRPDIAHVV 1077
>emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group]
Length = 576
Score = 313 bits (802), Expect = 7e-83
Identities = 159/250 (63%), Positives = 190/250 (76%)
Frame = -3
Query: 752 QREGVDYNEIFSPVVKHTSIRVLLSIVAHGDLELEQLDVKTAFLHGDLDE*IYMHQPEGY 573
Q GVDYN++FSPVVKH+SIR SIVA DLEL+QLDVKT FLHG+L++ IYM QPEG+
Sbjct: 214 QIAGVDYNDVFSPVVKHSSIRTFFSIVAMDDLELKQLDVKTTFLHGELEDEIYMDQPEGF 273
Query: 572 KVEDKERQVCRLRKSLYGLKQSPRQWYKRFDSFMLKHGFSRSEYDCCVYIRKLRGGDYIY 393
V KE VC+L++SLYGLKQSPRQWYKRFDSFML HGF SE+D CVYI K G IY
Sbjct: 274 IVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKWSEFDSCVYI-KFVNGSPIY 332
Query: 392 LLLYVDDMLIALKSNVEIDRLKSQLGKEFEMKDMGAAKKILGMEIKRERSNRKLFLSQKG 213
LLLYVDDMLIA KS +I LK QL EF+MKD+GAAKKILGMEI R+ + LFLSQ+
Sbjct: 333 LLLYVDDMLIAAKSKEQITTLKKQLSSEFDMKDLGAAKKILGMEITRDINFGLLFLSQQS 392
Query: 212 YIKRVIARFGMQDAKSVVTPLAPHFRLSGKQSPTIAEEKARMEHVPYASVVGSLMYAMVC 33
YIK+V+ F M DAK + TP+A HF+LS Q + E+ M VPY+S VGSLMYAM+C
Sbjct: 393 YIKKVLEHFNMHDAKPISTPIAAHFKLSALQCASTDEDVGYMSRVPYSSAVGSLMYAMIC 452
Query: 32 TCPNISQAVS 3
+ P++S A+S
Sbjct: 453 SRPDLSHAMS 462
>emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera]
Length = 595
Score = 313 bits (801), Expect = 9e-83
Identities = 154/251 (61%), Positives = 195/251 (77%), Gaps = 1/251 (0%)
Frame = -3
Query: 752 QREGVDYNEIFSPVVKHTSIRVLLSIVAHGDLELEQLDVKTAFLHGDLDE*IYMHQPEGY 573
QR+GVDY+EIFSP+V+HTSIR +L +VAH D++LEQ+DV+T FLHGDL+E +YM QPEG+
Sbjct: 236 QRKGVDYDEIFSPMVRHTSIRTVLGLVAHFDMQLEQMDVETTFLHGDLEELVYMVQPEGF 295
Query: 572 KVEDKERQVCRLRKSLYGLKQSPRQWYKRFDSFMLKHGFSRSEYDCCVYIRKL-RGGDYI 396
+E VC+LRKSLYGLKQSPRQWYK FDS++++ G+ R EYDC VY++ L +I
Sbjct: 296 IQPGQEHLVCKLRKSLYGLKQSPRQWYKCFDSYIIRIGYKRCEYDCFVYVKSLDDDSSFI 355
Query: 395 YLLLYVDDMLIALKSNVEIDRLKSQLGKEFEMKDMGAAKKILGMEIKRERSNRKLFLSQK 216
+LLLYVDDMLIA KS VE+++LKS L KEF+MK++ AAKKI+GMEI R+R++R+L+LSQ
Sbjct: 356 FLLLYVDDMLIAAKSMVEVNKLKSLLSKEFDMKELDAAKKIIGMEIHRDRASRRLWLSQY 415
Query: 215 GYIKRVIARFGMQDAKSVVTPLAPHFRLSGKQSPTIAEEKARMEHVPYASVVGSLMYAMV 36
Y+KRV RF M DAK V TPLA HFRLS Q P +E M VPYAS VG MYAMV
Sbjct: 416 SYVKRVFERFNMDDAKPVSTPLANHFRLSTNQCPKTBDEVKDMSKVPYASAVGCFMYAMV 475
Query: 35 CTCPNISQAVS 3
C P+++ VS
Sbjct: 476 CIRPDLAHTVS 486
>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 983
Score = 309 bits (791), Expect = 1e-81
Identities = 159/238 (66%), Positives = 183/238 (76%)
Frame = -3
Query: 752 QREGVDYNEIFSPVVKHTSIRVLLSIVAHGDLELEQLDVKTAFLHGDLDE*IYMHQPEGY 573
Q +D+N++FSP+VKH+SIR LLSIVA D ELEQ+DVKTAFLHG+L+E IYM QPEG+
Sbjct: 633 QIPSIDFNDVFSPIVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGF 692
Query: 572 KVEDKERQVCRLRKSLYGLKQSPRQWYKRFDSFMLKHGFSRSEYDCCVYIRKLRGGDYIY 393
V KE VCRL+KSLYGLKQSPRQWYKRFDSFML F RS YD CVY+ K+ G IY
Sbjct: 693 VVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDNCVYL-KVVDGSAIY 751
Query: 392 LLLYVDDMLIALKSNVEIDRLKSQLGKEFEMKDMGAAKKILGMEIKRERSNRKLFLSQKG 213
LLLYVDDMLIA K EI++LK+QL EFEMKD+GAAKKILGMEI RER + KL+LSQKG
Sbjct: 752 LLLYVDDMLIAAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKG 811
Query: 212 YIKRVIARFGMQDAKSVVTPLAPHFRLSGKQSPTIAEEKARMEHVPYASVVGSLMYAM 39
YI++V+ RF M DAK V TPLA HFR S P + M VPY+S VGSLMYAM
Sbjct: 812 YIEKVLRRFNMHDAKPVSTPLAAHFRSSSDLCPQSDYDIEYMSRVPYSSAVGSLMYAM 869