BLASTX nr result
ID: Forsythia22_contig00060404
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00060404
(399 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 150 2e-34
emb|CAA20201.1| putative transposable element [Arabidopsis thali... 148 2e-33
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar... 146 5e-33
pir||S23319 hypothetical protein 2 - Arabidopsis thaliana retrot... 146 5e-33
emb|CAA31653.1| polyprotein [Arabidopsis thaliana] 145 8e-33
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 145 1e-32
emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana] 139 7e-31
gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thal... 139 7e-31
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi... 139 1e-30
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 136 5e-30
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 136 6e-30
ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotei... 135 8e-30
gb|AAD36943.1|AF069441_3 putative polyprotein [Arabidopsis thali... 135 1e-29
ref|XP_009107606.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 134 3e-29
gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsi... 133 4e-29
gb|AAC28238.1| contains similarity to reverse trancriptase (Pfam... 132 7e-29
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 130 3e-28
gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsi... 130 4e-28
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 129 8e-28
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 129 1e-27
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 150 bits (380), Expect = 2e-34
Identities = 73/139 (52%), Positives = 91/139 (65%), Gaps = 8/139 (5%)
Frame = -2
Query: 395 QRLLEKDQITTLSFCETCVLGKSHTLSFGKGSHNSLKPLAYIHADLWEPEKHHTHGGNRY 216
Q LL + L FCETCV+GK + F GSH + L YIH+DLW P +H G RY
Sbjct: 766 QGLLSGAETGKLKFCETCVMGKQRRVKFSMGSHTTNGVLEYIHSDLWGPSPVESHSGCRY 825
Query: 215 FLSLVDDHSRKVWIFLLKTKDEV--------TLVENQKETKVKTLRTDNGLEFCNQEFDF 60
+++ +DD SRKVW++ LK KDEV T+VE + VKTLRTDNGLEFCN++FD
Sbjct: 826 YVTFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFDE 885
Query: 59 FCKDK*IQRHRTVRHPPQQ 3
FC+ + I RHRTVRH PQQ
Sbjct: 886 FCRKEGIVRHRTVRHTPQQ 904
>emb|CAA20201.1| putative transposable element [Arabidopsis thaliana]
gi|7268932|emb|CAB79135.1| putative transposable element
[Arabidopsis thaliana]
Length = 1308
Score = 148 bits (373), Expect = 2e-33
Identities = 78/140 (55%), Positives = 90/140 (64%), Gaps = 8/140 (5%)
Frame = -2
Query: 398 DQRLLEKDQITTLSFCETCVLGKSHTLSFGKGSHNSLKPLAYIHADLWEPEKHHTHGGNR 219
++ LLEK I LSFCE CV+GKS LSF G H + + L YIHADLW G +
Sbjct: 458 EKGLLEKKDIKELSFCENCVMGKSKKLSFNVGKHITDEVLGYIHADLW---------GKQ 508
Query: 218 YFLSLVDDHSRKVWIFLLKTKDEV--------TLVENQKETKVKTLRTDNGLEFCNQEFD 63
YFLS++DD SRKVW+ LKTKDE LVENQ KVK LRTDNGLEFCN +FD
Sbjct: 509 YFLSIIDDKSRKVWLMFLKTKDETFERFCEWKELVENQVNKKVKILRTDNGLEFCNLKFD 568
Query: 62 FFCKDK*IQRHRTVRHPPQQ 3
FCK I+RHRT + PQQ
Sbjct: 569 EFCKQNGIERHRTCTYTPQQ 588
>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 146 bits (369), Expect = 5e-33
Identities = 71/138 (51%), Positives = 92/138 (66%), Gaps = 9/138 (6%)
Frame = -2
Query: 389 LLEKDQITTLSFCETCVLGKSHTLSFGKGSHNSLKPLAYIHADLW-EPEKHHTHGGNRYF 213
L+++ +I L FCE CV+GKS +SF G H S L+Y+HADLW P + G +YF
Sbjct: 460 LIDRKEINELEFCEHCVMGKSKKVSFNVGKHTSEDALSYVHADLWGSPNVTPSISGKQYF 519
Query: 212 LSLVDDHSRKVWIFLLKTKDEV--------TLVENQKETKVKTLRTDNGLEFCNQEFDFF 57
LS++DD +RKVW++ LK+KDE +LVENQ KVK LRTDNGLEFCN FD +
Sbjct: 520 LSIIDDKTRKVWLYFLKSKDETFDKFCEWKSLVENQVNKKVKCLRTDNGLEFCNSRFDSY 579
Query: 56 CKDK*IQRHRTVRHPPQQ 3
CK+ I+RHRT + PQQ
Sbjct: 580 CKEHGIERHRTCTYTPQQ 597
>pir||S23319 hypothetical protein 2 - Arabidopsis thaliana retrotransposon Ta1-2
(strain Landsberg) (fragment) gi|16384|emb|CAA37924.1|
unnamed protein product [Arabidopsis thaliana]
Length = 1084
Score = 146 bits (369), Expect = 5e-33
Identities = 71/138 (51%), Positives = 93/138 (67%), Gaps = 9/138 (6%)
Frame = -2
Query: 389 LLEKDQITTLSFCETCVLGKSHTLSFGKGSHNSLKPLAYIHADLW-EPEKHHTHGGNRYF 213
L+ K++I L FCE CV+GK+ +SF G HNS L+Y+HADLW + GN+YF
Sbjct: 370 LVSKEEIRELDFCENCVMGKAKKVSFNMGKHNSEYVLSYVHADLWGSTNVTPSLSGNKYF 429
Query: 212 LSLVDDHSRKVWIFLLKTKDEV--------TLVENQKETKVKTLRTDNGLEFCNQEFDFF 57
LS++DD +RKVW++ L++KDE LVENQ+ KVK LRTDNGLEFCN +FD +
Sbjct: 430 LSIIDDKTRKVWLYFLRSKDETFDRFCERKELVENQQNKKVKCLRTDNGLEFCNLKFDAY 489
Query: 56 CKDK*IQRHRTVRHPPQQ 3
CKD I+RH T + PQQ
Sbjct: 490 CKDHGIERHMTCTYTPQQ 507
>emb|CAA31653.1| polyprotein [Arabidopsis thaliana]
Length = 1291
Score = 145 bits (367), Expect = 8e-33
Identities = 70/138 (50%), Positives = 93/138 (67%), Gaps = 9/138 (6%)
Frame = -2
Query: 389 LLEKDQITTLSFCETCVLGKSHTLSFGKGSHNSLKPLAYIHADLW-EPEKHHTHGGNRYF 213
L+ K++I L FCE CV+GK+ +SF G HNS L Y+HADLW + GN+YF
Sbjct: 470 LVSKEEIRVLDFCENCVMGKAKKVSFNVGKHNSEDVLRYVHADLWGSTNVTPSLSGNKYF 529
Query: 212 LSLVDDHSRKVWIFLLKTKDEV--------TLVENQKETKVKTLRTDNGLEFCNQEFDFF 57
LS++DD +RKVW++ L++KDE LVENQ+ KVK LRTDNGLEFCN +FD +
Sbjct: 530 LSIIDDKTRKVWLYFLRSKDETFDRFCEWKELVENQQNKKVKCLRTDNGLEFCNLKFDAY 589
Query: 56 CKDK*IQRHRTVRHPPQQ 3
CK+ I+RH+T + PQQ
Sbjct: 590 CKEHGIERHKTCTYTPQQ 607
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 145 bits (366), Expect = 1e-32
Identities = 71/139 (51%), Positives = 92/139 (66%), Gaps = 8/139 (5%)
Frame = -2
Query: 395 QRLLEKDQITTLSFCETCVLGKSHTLSFGKGSHNSLKPLAYIHADLWEPEKHHTHGGNRY 216
Q LL D+I L FCE C+ GKSH F KG H S + L Y H D W P + + G RY
Sbjct: 444 QGLLGGDRIQQLEFCENCIFGKSHRSKFNKGEHMSKQVLDYAHIDHWGPAQVPSLSGGRY 503
Query: 215 FLSLVDDHSRKVWIFLLKTKDEV--------TLVENQKETKVKTLRTDNGLEFCNQEFDF 60
F+SL+DD+SRKVWI++LK KD+ +LVENQ + K+K LRTDNGLEFC++ F+
Sbjct: 504 FMSLIDDYSRKVWIYILKIKDQALEKFKVWKSLVENQSDFKLKCLRTDNGLEFCSKVFEE 563
Query: 59 FCKDK*IQRHRTVRHPPQQ 3
+C+ I+RH+TVR PQQ
Sbjct: 564 YCQKHGIKRHKTVRFTPQQ 582
>emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]
Length = 1363
Score = 139 bits (350), Expect = 7e-31
Identities = 65/137 (47%), Positives = 92/137 (67%), Gaps = 9/137 (6%)
Frame = -2
Query: 386 LEKDQITTLSFCETCVLGKSHTLSFGKGSHNSLKPLAYIHADLW-EPEKHHTHGGNRYFL 210
L+K +++ L CE C+ G++ + F H++ K L Y+H+DLW P + G +YF+
Sbjct: 469 LDKKKVSMLDTCEDCIYGRAKKIGFNLAQHDTKKKLEYVHSDLWGAPTVPMSLGNCQYFI 528
Query: 209 SLVDDHSRKVWIFLLKTKDE--------VTLVENQKETKVKTLRTDNGLEFCNQEFDFFC 54
S +DD++RKVW++ LKTKDE ++LVENQ +VKTLRTDNGLEFCN+ FD FC
Sbjct: 529 SFIDDYTRKVWVYFLKTKDEAFEKFVSWISLVENQSGERVKTLRTDNGLEFCNRMFDGFC 588
Query: 53 KDK*IQRHRTVRHPPQQ 3
++K QRHRT + PQQ
Sbjct: 589 EEKGFQRHRTCAYTPQQ 605
>gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thaliana]
Length = 855
Score = 139 bits (350), Expect = 7e-31
Identities = 68/138 (49%), Positives = 94/138 (68%), Gaps = 9/138 (6%)
Frame = -2
Query: 389 LLEKDQITTLSFCETCVLGKSHTLSFGKGSHNSLKPLAYIHADLWEPEK-HHTHGGNRYF 213
L++ + T+L F E CV+GK+ +SF G HNS + L+Y+HADLW + + GN+YF
Sbjct: 143 LIKPSEATSLEFYEHCVMGKAKKVSFNIGKHNSEEILSYVHADLWGSQNVTPSMSGNKYF 202
Query: 212 LSLVDDHSRKVWIFLLKTKDEV--------TLVENQKETKVKTLRTDNGLEFCNQEFDFF 57
LS++DD SRKVW++ L++KDE LVENQ + +VK LRTDNGLEFCN +FD +
Sbjct: 203 LSIIDDKSRKVWLYFLRSKDETFDKFCEWKELVENQTDKRVKCLRTDNGLEFCNIKFDSY 262
Query: 56 CKDK*IQRHRTVRHPPQQ 3
CK I+RH+T + PQQ
Sbjct: 263 CKKYGIERHKTCTYTPQQ 280
>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1335
Score = 139 bits (349), Expect = 1e-30
Identities = 67/137 (48%), Positives = 89/137 (64%), Gaps = 9/137 (6%)
Frame = -2
Query: 386 LEKDQITTLSFCETCVLGKSHTLSFGKGSHNSLKPLAYIHADLW-EPEKHHTHGGNRYFL 210
L ++ I L FCE CV GK H +SF H + + LAY+H+DLW P + G ++YF+
Sbjct: 438 LRREVIKELEFCEDCVYGKQHRVSFAPAQHVTKEKLAYVHSDLWGSPHNPASLGNSQYFI 497
Query: 209 SLVDDHSRKVWIFLLKTKDEV--------TLVENQKETKVKTLRTDNGLEFCNQEFDFFC 54
S VDD+SRKVWI+ L+ KDE +VENQ + KVK LRTDNGLE+CN F+ FC
Sbjct: 498 SFVDDYSRKVWIYFLRKKDEAFEKFVEWKKMVENQSDRKVKKLRTDNGLEYCNHYFEKFC 557
Query: 53 KDK*IQRHRTVRHPPQQ 3
K++ I RH+T + PQQ
Sbjct: 558 KEEGIVRHKTCAYTPQQ 574
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 136 bits (343), Expect = 5e-30
Identities = 69/139 (49%), Positives = 88/139 (63%), Gaps = 8/139 (5%)
Frame = -2
Query: 395 QRLLEKDQITTLSFCETCVLGKSHTLSFGKGSHNSLKPLAYIHADLWEPEKHHTHGGNRY 216
Q +L ++T L FCE CV GK+ + F K H + L YIH+DLW P + + GG RY
Sbjct: 412 QGVLGNYKLTDLPFCEHCVFGKATRVKFAKAIHETQNQLDYIHSDLWGPSRVPSIGGARY 471
Query: 215 FLSLVDDHSRKVWIFLLKTKDEV--------TLVENQKETKVKTLRTDNGLEFCNQEFDF 60
FL+L+DD+SRKVWI+ LK K E LVE Q KVK LRTDNGLEF + +F+
Sbjct: 472 FLTLIDDYSRKVWIYFLKNKSETFLKFKEWKILVETQTSRKVKKLRTDNGLEFLSNDFNS 531
Query: 59 FCKDK*IQRHRTVRHPPQQ 3
C+ + I RHRTVR+ PQQ
Sbjct: 532 LCQKEGIARHRTVRYTPQQ 550
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 136 bits (342), Expect = 6e-30
Identities = 67/137 (48%), Positives = 87/137 (63%), Gaps = 8/137 (5%)
Frame = -2
Query: 389 LLEKDQITTLSFCETCVLGKSHTLSFGKGSHNSLKPLAYIHADLWEPEKHHTHGGNRYFL 210
LL ++ +L FCE CV GK H F K H + L YIH+D W P + + GG R+F+
Sbjct: 434 LLAGHKVKSLEFCEHCVFGKLHRNKFPKAIHRTKGTLDYIHSDCWGPCRVESLGGCRFFV 493
Query: 209 SLVDDHSRKVWIFLLKTKDEV--------TLVENQKETKVKTLRTDNGLEFCNQEFDFFC 54
S++DD+SR W++++K K E L+ENQ K+K LRTDNGLEFC EFD FC
Sbjct: 494 SIIDDYSRMTWVYMMKHKSEAFQKFKEWKILMENQTGKKIKRLRTDNGLEFCWSEFDQFC 553
Query: 53 KDK*IQRHRTVRHPPQQ 3
KD+ I RHRTVR+ PQQ
Sbjct: 554 KDEGIARHRTVRNTPQQ 570
>ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 [Erythranthe guttatus]
Length = 598
Score = 135 bits (341), Expect = 8e-30
Identities = 66/137 (48%), Positives = 94/137 (68%), Gaps = 12/137 (8%)
Frame = -2
Query: 377 DQITTLSFCETCVLGKSHTLSFGKGSHNSLKP----LAYIHADLWEPEKHHTHGGNRYFL 210
D++++++ C++C+LGK + F + +L L YIHAD+W P T+GGNRYFL
Sbjct: 170 DKVSSVTLCDSCILGKQTHVLFPEYPSPNLSRCTEILEYIHADVWGPTSVPTYGGNRYFL 229
Query: 209 SLVDDHSRKVWIFLLKTKDEV--------TLVENQKETKVKTLRTDNGLEFCNQEFDFFC 54
S++DD+SRKV++FLLK K +V TL+ENQ ++KTLRTDNG+EFCN EFD C
Sbjct: 230 SIIDDYSRKVFVFLLKQKSDVFDKFKTWKTLIENQTGKRIKTLRTDNGIEFCNLEFDNLC 289
Query: 53 KDK*IQRHRTVRHPPQQ 3
+ I+RH++V H PQQ
Sbjct: 290 ANSGIRRHKSVVHTPQQ 306
>gb|AAD36943.1|AF069441_3 putative polyprotein [Arabidopsis thaliana]
gi|7267195|emb|CAB77906.1| putative polyprotein
[Arabidopsis thaliana]
Length = 778
Score = 135 bits (339), Expect = 1e-29
Identities = 65/137 (47%), Positives = 90/137 (65%), Gaps = 9/137 (6%)
Frame = -2
Query: 386 LEKDQITTLSFCETCVLGKSHTLSFGKGSHNSLKPLAYIHADLW-EPEKHHTHGGNRYFL 210
L+K +++ L CE C+ GK+ + F H++ + L Y+H DLW P G +YF+
Sbjct: 352 LDKKKVSMLDTCEDCIYGKAKKIGFNFAQHDTKEKLEYVHYDLWGAPTMPMALGNCQYFI 411
Query: 209 SLVDDHSRKVWIFLLKTKDE--------VTLVENQKETKVKTLRTDNGLEFCNQEFDFFC 54
S +DDH+RKV ++ LKTKDE ++LVENQ +VKTLRTDNGLEFCN+ FD FC
Sbjct: 412 SFIDDHTRKVCVYFLKTKDEAFEKFVSWISLVENQSGNRVKTLRTDNGLEFCNRMFDGFC 471
Query: 53 KDK*IQRHRTVRHPPQQ 3
+++ IQRHRT + PQQ
Sbjct: 472 EERGIQRHRTCPYTPQQ 488
>ref|XP_009107606.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC103833265 [Brassica rapa]
Length = 3353
Score = 134 bits (336), Expect = 3e-29
Identities = 65/137 (47%), Positives = 84/137 (61%), Gaps = 9/137 (6%)
Frame = -2
Query: 386 LEKDQITTLSFCETCVLGKSHTLSFGKGSHNSLKPLAYIHADLW-EPEKHHTHGGNRYFL 210
+ K ++ L FCE CVLGK H LSF H + L Y+H+DLW P + GG +YF+
Sbjct: 375 IPKTEVGKLEFCEGCVLGKKHKLSFPTAKHTTKGILEYVHSDLWGSPSTPGSLGGCKYFI 434
Query: 209 SLVDDHSRKVWIFLLKTKDEV--------TLVENQKETKVKTLRTDNGLEFCNQEFDFFC 54
S +DD S+KVW++ L+TKDE VE+ E K+K LRTDNGLEFCN FD C
Sbjct: 435 SFIDDFSKKVWVYFLQTKDEAFSKFKEWKEAVESHTEKKIKCLRTDNGLEFCNNRFDELC 494
Query: 53 KDK*IQRHRTVRHPPQQ 3
+ I+RHRT + PQQ
Sbjct: 495 RTSGIKRHRTCNYTPQQ 511
Score = 134 bits (336), Expect = 3e-29
Identities = 65/137 (47%), Positives = 84/137 (61%), Gaps = 9/137 (6%)
Frame = -2
Query: 386 LEKDQITTLSFCETCVLGKSHTLSFGKGSHNSLKPLAYIHADLW-EPEKHHTHGGNRYFL 210
+ K ++ L FCE CVLGK H LSF H + L Y+H+DLW P + GG +YF+
Sbjct: 2450 IPKTEVGKLEFCEGCVLGKKHKLSFPTAKHTTKGILEYVHSDLWGSPSTPGSLGGCKYFI 2509
Query: 209 SLVDDHSRKVWIFLLKTKDEV--------TLVENQKETKVKTLRTDNGLEFCNQEFDFFC 54
S +DD S+KVW++ L+TKDE VE+ E K+K LRTDNGLEFCN FD C
Sbjct: 2510 SFIDDFSKKVWVYFLQTKDEAFSKFKEWKEAVESHTEKKIKCLRTDNGLEFCNNRFDELC 2569
Query: 53 KDK*IQRHRTVRHPPQQ 3
+ I+RHRT + PQQ
Sbjct: 2570 RTSGIKRHRTCNYTPQQ 2586
>gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 133 bits (335), Expect = 4e-29
Identities = 66/137 (48%), Positives = 91/137 (66%), Gaps = 9/137 (6%)
Frame = -2
Query: 386 LEKDQITTLSFCETCVLGKSHTLSFGKGSHNSLKPLAYIHADLW-EPEKHHTHGGNRYFL 210
L+K ++++L CE C+ GK+ SF H++ + L YIH+DLW P + G +YF+
Sbjct: 462 LDKKKVSSLDVCEDCIYGKAKRKSFSLAHHDTKEKLEYIHSDLWGAPFVPLSLGKCQYFM 521
Query: 209 SLVDDHSRKVWIFLLKTKDE--------VTLVENQKETKVKTLRTDNGLEFCNQEFDFFC 54
S++DD +RKVW++ +KTKDE V LVENQ + +VKTLRTDNGLEFCN+ FD FC
Sbjct: 522 SIIDDFTRKVWVYFMKTKDEAFEKFVEWVNLVENQTDRRVKTLRTDNGLEFCNKLFDGFC 581
Query: 53 KDK*IQRHRTVRHPPQQ 3
+ I RHRT + PQQ
Sbjct: 582 ESIGIHRHRTCAYTPQQ 598
>gb|AAC28238.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
19.54) and CCHC-type zinc fingers (Pfam: zf-CCHC.hmm,
score: 12.35) [Arabidopsis thaliana]
gi|7267184|emb|CAB77896.1| putative transposon protein
[Arabidopsis thaliana]
Length = 1104
Score = 132 bits (333), Expect = 7e-29
Identities = 69/138 (50%), Positives = 85/138 (61%), Gaps = 9/138 (6%)
Frame = -2
Query: 389 LLEKDQITTLSFCETCVLGKSHTLSFGKGSHNSLKPLAYIHADLW-EPEKHHTHGGNRYF 213
L+EK + L FCE V+GKS LSF G H + L Y+HADLW P + G +YF
Sbjct: 365 LIEKKEFKDLDFCEHYVMGKSKKLSFNVGKHVTEDILGYVHADLWGSPNVTPSISGKQYF 424
Query: 212 LSLVDDHSRKVWIFLLKTKDEV--------TLVENQKETKVKTLRTDNGLEFCNQEFDFF 57
LS++DD SRKVW+ LK+KDE +VEN KVKTLRTDNGLEFCN F+ +
Sbjct: 425 LSIIDDKSRKVWLMFLKSKDETFDKFCEWKEIVENHVGKKVKTLRTDNGLEFCNNRFNDY 484
Query: 56 CKDK*IQRHRTVRHPPQQ 3
C I+RHRT + PQQ
Sbjct: 485 CAKTGIERHRTCTYTPQQ 502
>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
Length = 1773
Score = 130 bits (328), Expect = 3e-28
Identities = 63/137 (45%), Positives = 85/137 (62%), Gaps = 8/137 (5%)
Frame = -2
Query: 389 LLEKDQITTLSFCETCVLGKSHTLSFGKGSHNSLKPLAYIHADLWEPEKHHTHGGNRYFL 210
LL+ I L FCE C+ GK + F +H + L Y+H+DLW P + + GG RY +
Sbjct: 395 LLDGQNIGKLKFCEHCIFGKHKRVKFTTSTHTTEGILDYVHSDLWGPARKRSFGGARYMM 454
Query: 209 SLVDDHSRKVWIFLLKTKDEV--------TLVENQKETKVKTLRTDNGLEFCNQEFDFFC 54
++VDD+SRKVW + LK K E T+VE Q E KVK LRTDNG+EFC+++F +C
Sbjct: 455 TIVDDYSRKVWPYFLKHKFEAFLVFKEWKTMVERQTERKVKVLRTDNGMEFCSRQFKSYC 514
Query: 53 KDK*IQRHRTVRHPPQQ 3
+ + I RH TV H PQQ
Sbjct: 515 RSEGIVRHYTVSHTPQQ 531
>gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 130 bits (326), Expect = 4e-28
Identities = 64/138 (46%), Positives = 88/138 (63%), Gaps = 9/138 (6%)
Frame = -2
Query: 389 LLEKDQITTLSFCETCVLGKSHTLSFGKGSHNSLKPLAYIHADLW-EPEKHHTHGGNRYF 213
LL+K +++ L CE C+ GK+ + F H++ + L Y+H+DLW P + G +YF
Sbjct: 439 LLDKKKVSKLETCEDCIYGKAKRIGFNLAQHDTREKLEYVHSDLWGAPSVPFSLGKCQYF 498
Query: 212 LSLVDDHSRKVWIFLLKTKDEV--------TLVENQKETKVKTLRTDNGLEFCNQEFDFF 57
+S +DD++RKV I+ LKTKDE LVENQ + ++KTLRTDNGLEFCN+ FD F
Sbjct: 499 ISFIDDYTRKVRIYFLKTKDEAFDKFVEWANLVENQTDKRIKTLRTDNGLEFCNRSFDEF 558
Query: 56 CKDK*IQRHRTVRHPPQQ 3
C K I HRT + PQQ
Sbjct: 559 CSQKGILWHRTCAYTPQQ 576
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 129 bits (324), Expect = 8e-28
Identities = 63/137 (45%), Positives = 85/137 (62%), Gaps = 8/137 (5%)
Frame = -2
Query: 389 LLEKDQITTLSFCETCVLGKSHTLSFGKGSHNSLKPLAYIHADLWEPEKHHTHGGNRYFL 210
LL+ I+ L FCE C+ GK + F +H + L Y+H+DLW P + + GG RY +
Sbjct: 456 LLDGQSISKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMM 515
Query: 209 SLVDDHSRKVWIFLLKTKDEV--------TLVENQKETKVKTLRTDNGLEFCNQEFDFFC 54
++VDD+SRKVW + LK K + T+VE Q E KVK LRTDNG+EFC++ F +C
Sbjct: 516 TIVDDYSRKVWPYFLKHKYQAFNVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYC 575
Query: 53 KDK*IQRHRTVRHPPQQ 3
K + I RH TV H PQQ
Sbjct: 576 KSEGIVRHYTVPHTPQQ 592
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 129 bits (323), Expect = 1e-27
Identities = 63/137 (45%), Positives = 84/137 (61%), Gaps = 8/137 (5%)
Frame = -2
Query: 389 LLEKDQITTLSFCETCVLGKSHTLSFGKGSHNSLKPLAYIHADLWEPEKHHTHGGNRYFL 210
LL+ I L FCE C+ GK + F +H + L Y+H+DLW P + + GG RY +
Sbjct: 663 LLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGTRYMM 722
Query: 209 SLVDDHSRKVWIFLLKTKDEV--------TLVENQKETKVKTLRTDNGLEFCNQEFDFFC 54
++VDD+SRKVW + LK K + T+VE Q E KVK LRTDNG+EFC++ F +C
Sbjct: 723 TIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYC 782
Query: 53 KDK*IQRHRTVRHPPQQ 3
K + I RH TV H PQQ
Sbjct: 783 KSEGIVRHYTVPHTPQQ 799